BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P97612
         (579 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

6MRG-A nrPDB                                                         1118   0.0  
5H6S-A nrPDB                                                          109   3e-24
3H0L-A nrPDB                                                          102   4e-22
3KFU-E nrPDB                                                           92   6e-19
6C6G-A nrPDB                                                           89   7e-18
6DII-A nrPDB                                                           85   7e-17
4WJ3-A nrPDB                                                           84   2e-16
2G5H-A nrPDB                                                           83   4e-16
2DC0-A nrPDB                                                           83   4e-16
3AL0-A nrPDB                                                           70   3e-12
1O9P-A nrPDB                                                           68   1e-11
4YJI-A nrPDB                                                           64   2e-10
3A2Q-A nrPDB                                                           64   2e-10
3A1K-A nrPDB                                                           63   3e-10
4N0I-A nrPDB                                                           52   6e-07
4GYR-A nrPDB                                                           46   4e-05
3T7C-A nrPDB                                                           32   0.67 

>6MRG-A nrPDB
          Length = 580

 Score = 1118 bits (2892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/548 (98%), Positives = 546/548 (99%)

Query: 32  TGRQKARGAATRARQKQRASLETMDKAVQRFRLQNPDLDSEALLTLPLLQLVQKLQSGEL 91
           TGRQKARGAATRARQKQRASLETMDKAVQRFRLQNPDLDSEALLTLPLLQLVQKLQSGEL
Sbjct: 33  TGRQKARGAATRARQKQRASLETMDKAVQRFRLQNPDLDSEALLTLPLLQLVQKLQSGEL 92

Query: 92  SPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQGLLYGVPVSLKECFSYKGHD 151
           SPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQGLLYGVPVSLKECFSYKGHD
Sbjct: 93  SPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQGLLYGVPVSLKECFSYKGHD 152

Query: 152 STLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLSFDCSNPLFGQTMNPWKSS 211
           STLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSM S+DCSNPLFGQTMNPWKSS
Sbjct: 153 STLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTMNPWKSS 212

Query: 212 KSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCVY 271
           KSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCVY
Sbjct: 213 KSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCVY 272

Query: 272 GQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPPLPFREEVYRSSRPLRVGYYE 331
           GQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPPLPFREEVYRSSRPLRVGYYE
Sbjct: 273 GQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPPLPFREEVYRSSRPLRVGYYE 332

Query: 332 TDNYTMPSPAMRRALIETKQRLEAAGHTLIPFLPNNIPYALEVLSAGGLFSDGGRSFLQN 391
           TDNYTMPSPAMRRALIETKQRLEAAGHTLIPFLPNNIPYALEVLS GGLFSDGGRSFLQN
Sbjct: 333 TDNYTMPSPAMRRALIETKQRLEAAGHTLIPFLPNNIPYALEVLSTGGLFSDGGRSFLQN 392

Query: 392 FKGDFVDPCLGDLILILRLPSWFKRLLSLLLKPLFPRLAAFLNSMRPRSAEKLWKLQHEI 451
           FKGDFVDPCLGDLILILRLPSWFKRLLSLLLKPLFPRLAAFLN+MRPRSAEKLWKLQHEI
Sbjct: 393 FKGDFVDPCLGDLILILRLPSWFKRLLSLLLKPLFPRLAAFLNNMRPRSAEKLWKLQHEI 452

Query: 452 EMYRQSVIAQWKAMNLDVLLTPMLGPALDLNTPGRATGAISYTVLYNCLDFPAGVVPVTT 511
           EMYRQSVIAQWKAMNLDVLLTPMLGPALDLNTPGRATGA+SYT+LYNCLDFPAGVVPVTT
Sbjct: 453 EMYRQSVIAQWKAMNLDVLLTPMLGPALDLNTPGRATGAVSYTMLYNCLDFPAGVVPVTT 512

Query: 512 VTAEDDAQMELYKGYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVEQL 571
           VTAEDDAQMELYKGYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVEQL
Sbjct: 513 VTAEDDAQMELYKGYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVEQL 572

Query: 572 MTPQKQPS 579
           MTPQKQPS
Sbjct: 573 MTPQKQPS 580


>5H6S-A nrPDB
          Length = 481

 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 9/226 (3%)

Query: 81  QLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQ-------GL 133
           ++  ++  G  S E V   +L +  E N  TN       D   + ++A  +       G 
Sbjct: 33  EIRARISEGAASREEVVHEHLDRIDEFNALTNSFVELRADQVLEEARAADREFGSTLGGP 92

Query: 134 LYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLS 193
           L GVP+S+K+ +S  G   T GL +N  +    D V    L+  G +   H  +P   + 
Sbjct: 93  LDGVPLSIKDSYSVAGLHRTDGLPVNADVLDAQDDVATARLRAAGGLVLGHAGIPDLCIR 152

Query: 194 FDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICG 253
           ++  + L+G   NP   S++ GGSSGG+ A + +G + +GLG D+GGSIR P+++CG+ G
Sbjct: 153 WNSVSGLYGAVRNPRDLSRTAGGSSGGDAANVAAGFATIGLGGDLGGSIRVPASWCGVYG 212

Query: 254 LKPTGNRLSKSGLKGCVYGQTAVQL--SLGPMARDVESLALCLKAL 297
            +    R+      G       ++L   +GP+AR ++ + L  + +
Sbjct: 213 FRTGPGRIPDVNPNGGRSRNVVMELMAQIGPIARSIDDIELAFRIM 258


>3H0L-A nrPDB
          Length = 478

 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 150/302 (49%), Gaps = 19/302 (6%)

Query: 79  LLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQ-LSQAP----RQGL 133
           L +L + L+ GE+SP+ V  ++  +    N+    V +Y+T    + L QA     R+  
Sbjct: 7   LSELRELLKRGEVSPKEVVESFYDR---YNQTEEKVKAYITPLYGKALKQAESLKERELP 63

Query: 134 LYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLS 193
           L+G+P+++K+    +G  +T    + E   +  D  V++ LK  GA+    TN+ +  + 
Sbjct: 64  LFGIPIAVKDNILVEGEKTTCASKILENFVAPYDATVIERLKKAGALIVGKTNLDEFAMG 123

Query: 194 FDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICG 253
                  F  T NPW   + PGGSSGG  A +    +P+ LG+D GGSIR P++FCG+ G
Sbjct: 124 SSTEYSAFFPTKNPWDLERVPGGSSGGSAASVAVLSAPVSLGSDTGGSIRQPASFCGVIG 183

Query: 254 LKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALL-CEHLFTLDPTVPPL 312
           +KPT  R+S+ GL    +  +  Q  +G   R  E +AL L+ +   +   +    VP  
Sbjct: 184 IKPTYGRVSRYGL--VAFASSLDQ--IGVFGRRTEDVALVLEVISGWDEKDSTSAKVPVP 239

Query: 313 PFREEVYRSSRPLRVGY-YETDNYTMPSPAMRRALIETKQRLEAAGHTL----IPFLPNN 367
            + EEV +  + L++G   E   Y +  P ++ A     + LE  G  +    +P +  +
Sbjct: 240 EWSEEVKKEVKGLKIGLPKEFFEYEL-QPQVKEAFENFIKELEKEGFEIKEVSLPHVKYS 298

Query: 368 IP 369
           IP
Sbjct: 299 IP 300


>3KFU-E nrPDB
          Length = 471

 Score = 92.0 bits (227), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 94/272 (34%), Positives = 138/272 (50%), Gaps = 11/272 (4%)

Query: 81  QLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQGL-LYGVPV 139
           ++  ++  GE+SP  V   YL +  E++ G     S L +   + ++A   GL L G+ V
Sbjct: 5   EIRARVARGEVSPLEVAQAYLKRVQELDPGLGAFLS-LNERLLEEAEAVDPGLPLAGLVV 63

Query: 140 SLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLSFDCSNP 199
           ++K+  + +G  +T G  L E      +   V  LK  GA+    TN+ +  +     + 
Sbjct: 64  AVKDNIATRGLRTTAGSRLLENFVPPYEATAVARLKALGALVLGKTNLDEFGMGSSTEHS 123

Query: 200 LFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGN 259
            F  T NP+   + PGGSSGG  A + +  +PL LG+D GGS+R P+AFCG+ GLKPT  
Sbjct: 124 AFFPTKNPFDPDRVPGGSSGGSAAALAADLAPLALGSDTGGSVRQPAAFCGVYGLKPTYG 183

Query: 260 RLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPPLP--FREE 317
           R+S+ GL    Y  +  Q  +GPMAR V  LAL + A        LD T   LP  F+E 
Sbjct: 184 RVSRFGL--IAYASSLDQ--IGPMARSVRDLALLMDAAAGPD--PLDATSLDLPPRFQEA 237

Query: 318 VYRSSRPLRVGYYETDNYTMPSPAMRRALIET 349
           +     PLR+G    +     SP + RAL E 
Sbjct: 238 LEGPLPPLRLGVVR-EALAGNSPGVERALEEA 268


>6C6G-A nrPDB
          Length = 457

 Score = 88.6 bits (218), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 91/165 (55%), Gaps = 5/165 (3%)

Query: 134 LYGVPVSLKECFSYKGHDSTLGLSLNEGM-PSESDCVVVQVLKLQGAVPFVHTNVPQSML 192
           L G+P ++K  F  +G  +  G  +N  + P+ +D V+VQ LK  GAV     N+ +   
Sbjct: 66  LAGLPYAVKNLFDIEGVTTLAGSKINRTLPPARADAVLVQRLKAAGAVLLGGLNMDEFAY 125

Query: 193 SFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGIC 252
            F   N  +G T NP  + +  GGSSGG GA I +G  PL LG+D  GSIR P++ CG+ 
Sbjct: 126 GFTTENTHYGPTRNPHDTGRIAGGSSGGSGAAIAAGQVPLSLGSDTNGSIRVPASLCGVW 185

Query: 253 GLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKAL 297
           GLKPT  RLS+ G    V+        LGP+A  VE LAL   A+
Sbjct: 186 GLKPTFGRLSRRGTYPFVHSID----HLGPLADSVEGLALAYDAM 226



 Score = 34.3 bits (77), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 12/20 (60%), Positives = 15/20 (75%)

Query: 544 GLPVAVQCVALPWQEELCLR 563
           G+P+ VQ +A PW E LCLR
Sbjct: 423 GMPIGVQLIAAPWNESLCLR 442


>6DII-A nrPDB
          Length = 636

 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 89/185 (48%), Gaps = 8/185 (4%)

Query: 133 LLYGVPVSLKECFSYKGHDSTLGLS-LNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSM 191
           +L G+ V++K+      H +  G + L+E    E D  VV  L+  GA+     N+ +  
Sbjct: 196 VLDGIFVTIKDDIDCLPHPTNGGTTWLHEDRSVEKDSAVVSKLRSCGAILLGKANMHELG 255

Query: 192 LSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGI 251
           +    +N  +G T NP    +  GGSS G  A++ +G     LGTD GGS+R PSA CGI
Sbjct: 256 MGTTGNNSNYGTTRNPHDPKRYTGGSSSGSAAIVAAGLCSAALGTDGGGSVRIPSALCGI 315

Query: 252 CGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALL---CEHLFTLDPT 308
            GLK T  R   +G   C  G   +   +GP+A  +E   L   A+L       + L P+
Sbjct: 316 TGLKTTYGRTDMTG-SLCEGGTVEI---IGPLASSLEDAFLVYAAILGSSSADRYNLKPS 371

Query: 309 VPPLP 313
            P  P
Sbjct: 372 PPCFP 376



 Score = 31.6 bits (70), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 45/124 (36%), Gaps = 39/124 (31%)

Query: 466 NLDVLLTPMLGPALDLNTPGR----------ATGAISYTVLYNCLDFPAGVVPVTTVTAE 515
           ++DV++TP  G    +  P             T  + + +  N L FPA  VPV      
Sbjct: 504 DVDVIVTPTTGMTAPVIPPDALKNGETNIQVTTDLMRFVLAANLLGFPAISVPV------ 557

Query: 516 DDAQMELYKGYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVEQLMTPQ 575
                    GY              +  GLP+ +Q +  PW E   L     VE+L    
Sbjct: 558 ---------GY--------------DKEGLPIGLQIMGRPWAEATVLGLAAAVEELAPVT 594

Query: 576 KQPS 579
           K+P+
Sbjct: 595 KKPA 598


>4WJ3-A nrPDB
          Length = 484

 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/231 (30%), Positives = 108/231 (46%), Gaps = 11/231 (4%)

Query: 74  LLTLPLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQ-- 131
           L  L L ++ + L   + S E +  T LG+  +++   N   S   D     ++A  +  
Sbjct: 2   LHQLTLAEIARALADKQFSAEELTRTLLGRIRQLDPQLNSFISITDDLAIAQAKAADERR 61

Query: 132 -----GLLYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTN 186
                G L G P++ K+ F  +G  ++ G  + +   S  D  VV+ L   GAV     N
Sbjct: 62  ANGENGALLGAPIAHKDLFCTQGVRTSCGSKMLDNFVSPYDATVVEKLTAAGAVTLGKLN 121

Query: 187 VPQSMLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPS 246
           + +  +     +  +G   NPW   + PGGSSGG  A + +   P   GTD GGSIR P+
Sbjct: 122 MDEFAMGSSNQSSHYGAVKNPWSLDRVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPA 181

Query: 247 AFCGICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKAL 297
           A   + G+KPT  R+S+ G+    Y  +  Q   GP+AR  E  AL L  +
Sbjct: 182 ALTNLTGIKPTYGRVSRWGM--IAYASSLDQ--GGPLARTAEDCALMLGVM 228


>2G5H-A nrPDB
          Length = 485

 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 109/206 (52%), Gaps = 11/206 (5%)

Query: 127 QAPRQ--GLLYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVH 184
           QA  Q  G L+G+P+ +K+     G ++T    + EG     +  V++ L  + AV    
Sbjct: 62  QAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGK 121

Query: 185 TNVPQSMLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRF 244
            N+ +  +        F +T+NP+     PGGSSGG  A + +G  PL LG+D GGSIR 
Sbjct: 122 LNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQ 181

Query: 245 PSAFCGICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFT 304
           P+A+CG+ G+KPT  R+S+ GL    +  +  Q  +GP+ R+V+  A+ L+A+    +  
Sbjct: 182 PAAYCGVVGMKPTYGRVSRFGL--VAFASSLDQ--IGPLTRNVKDNAIVLEAISGADVN- 236

Query: 305 LDPTVPP---LPFREEVYRSSRPLRV 327
            D T  P   + F  E+ +  + L+V
Sbjct: 237 -DSTSAPVDDVDFTSEIGKDIKGLKV 261


>2DC0-A nrPDB
          Length = 434

 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 110/234 (47%), Gaps = 18/234 (7%)

Query: 79  LLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTD---------CETQLSQAP 129
           LL+  + L++G  +P A+    L +A +  +  N + +YL +            +L +  
Sbjct: 3   LLEAKRLLETGRTTPLALLEEALERA-KAFQDRNAL-AYLDEEAARKEALALTEELRRGQ 60

Query: 130 RQGLLYGVPVSLKECFSYKGHDSTLGLSLN-EGMPSESDCVVVQVLKLQGAVPFVHTNVP 188
            +G L+G+P+++K+ F  KG  +  G       +P E+  V  + L+  GA+ F  TN+ 
Sbjct: 61  VRGPLHGLPLTVKDLFPVKGMPTRAGTKAPLPPLPEEARAV--RRLREAGALLFAKTNMH 118

Query: 189 QSMLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAF 248
           +  L     NP  G   N    S+  GGSSGG    +  G     LGTD GGSIR P+ F
Sbjct: 119 EIALGITGENPWTGPVRNAVDPSRQAGGSSGGSAVAVALGIGLASLGTDTGGSIRIPAGF 178

Query: 249 CGICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHL 302
            G+ G KP+  R+S   L+G +    +   + GP+ R V       + L  E +
Sbjct: 179 NGVVGFKPSYGRVS---LEGALPLSRSTDHA-GPLTRSVRDAHFLTEILAGESI 228


>3AL0-A nrPDB
          Length = 475

 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 4/168 (2%)

Query: 130 RQGLLYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQ 189
           ++G  +G+PV++K+     G  +T    + E   S  D  VV+ +K  G V     N+ +
Sbjct: 54  KKGKFWGIPVAIKDNILTLGMRTTCASRILENYESVFDATVVKKMKEAGFVVVGKANLDE 113

Query: 190 SMLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFC 249
             +        F  T NPW   + PGGSSGG  A + +G     LG+D GGS+R P++ C
Sbjct: 114 FAMGSSTERSAFFPTRNPWDLERVPGGSSGGSAAAVSAGMVVAALGSDTGGSVRQPASLC 173

Query: 250 GICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKAL 297
           G+ G KPT   +S+ GL    +  +  Q  +GP+ + V   A+ ++ +
Sbjct: 174 GVVGYKPTYGLVSRYGL--VAFASSLDQ--IGPITKTVRDAAILMEII 217


>1O9P-A nrPDB
          Length = 414

 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 87/191 (45%), Gaps = 11/191 (5%)

Query: 77  LPLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQGLLYG 136
           + L  L +++++GELSP A             K  +    +      Q S     G L G
Sbjct: 2   ISLADLQRRIETGELSPNAAIAQSHAAIEAREKEVHAFVRHDKSARAQAS-----GPLRG 56

Query: 137 VPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLSFDC 196
           + V +K+        + +G  +  G    SD  VV +LK  GA     T    +  +F  
Sbjct: 57  IAVGIKDIIDTANMPTEMGSEIYRGWQPRSDAPVVMMLKRAGATIIGKT----TTTAFAS 112

Query: 197 SNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKP 256
            +P    T+NP  +  SPGG+S G  A +G+G  PL LGT  GGS+  P+A+CG   +KP
Sbjct: 113 RDPT--ATLNPHNTGHSPGGASSGSAAAVGAGMIPLALGTQTGGSVIRPAAYCGTAAIKP 170

Query: 257 TGNRLSKSGLK 267
           +   L   G+K
Sbjct: 171 SFRMLPTVGVK 181


>4YJI-A nrPDB
          Length = 495

 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 132/312 (42%), Gaps = 23/312 (7%)

Query: 81  QLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTD--------CETQLSQAPRQG 132
           ++V+ ++S ++SP  V  + +    + + G N V     D         E ++ Q    G
Sbjct: 15  EIVELVKSKQISPREVVESTIDLIEQRDPGLNAVVYKAYDEAREKAAALERRIMQGEPVG 74

Query: 133 LLYGVPVSLKECFSYK-GHDSTL-GLSLNEGMPSESDCVVVQVLKLQGAVPFV--HTNVP 188
           +L GVP  +K+ F+ K G  STL G+   +     +       LK+ G    +   TN P
Sbjct: 75  MLAGVPTLMKDLFAAKPGWPSTLGGIRALKDARGAAGVWSTYPLKMSGEDSLLLGQTNSP 134

Query: 189 QSMLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAF 248
                    N  FG T NP+    + GGSSGG  AL+  G  P+  GTD GG+IR P+A+
Sbjct: 135 VYGFRGTTDNTFFGPTRNPFNLDFNAGGSSGGAAALVADGIVPVAGGTDGGGAIRIPAAW 194

Query: 249 CGICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFT-LDP 307
               G +P+  R+         +      L  GP+ R V   AL +  L   H F   DP
Sbjct: 195 TNTYGFQPSIGRVPFKSRPNAFH--PGPYLYEGPITRTVRDAALAMNVL---HGFDRRDP 249

Query: 308 TV--PPLPFREEVYRSSRPLRVGYYETDNY-TMPSPAMRRALIETKQRLEAAGHTLIPFL 364
                 L F   + +  R  ++G   T NY   P     + LI    R+       + F+
Sbjct: 250 ASLRVKLDFTSALAQGVRGKKIGL--TLNYGVFPVQQEIQDLIGKAARVFTELGAHVEFV 307

Query: 365 PNNIPYALEVLS 376
              IPY+ + +S
Sbjct: 308 DLGIPYSQKQMS 319


>3A2Q-A nrPDB
          Length = 493

 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 86/183 (46%), Gaps = 10/183 (5%)

Query: 86  LQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDC---ETQLSQAPRQGLLYGVPVSLK 142
           ++SGE+S   +    +     VN   N V   L +    E++L+  P      GVP  LK
Sbjct: 17  VRSGEISRTELLEATIAHVQAVNPEINAVIIPLFEKARRESELASGP----FAGVPYLLK 72

Query: 143 ECFSYKGHD---STLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLSFDCSNP 199
           +       D   S++      G  ++ D   VQ ++  G V    TN P+          
Sbjct: 73  DLTVVSQGDINTSSIKGMKESGYRADHDAYFVQRMRAAGFVLLGKTNTPEMGNQVTTEPE 132

Query: 200 LFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGN 259
            +G T NPW   +S GGSSGG GA + +  SP+  G D  G++R P++ CG+ GLKPT  
Sbjct: 133 AWGATRNPWNLGRSVGGSSGGSGAAVAAALSPVAHGNDAAGAVRIPASVCGVVGLKPTRG 192

Query: 260 RLS 262
           R+S
Sbjct: 193 RIS 195


>3A1K-A nrPDB
          Length = 521

 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 71/167 (42%), Gaps = 4/167 (2%)

Query: 131 QGLLYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQS 190
            G+L G  V++K+  +  G     G    EG     D  VV  L   GA           
Sbjct: 85  DGVLTGRRVAIKDNVTVAGVPMMNGSRTVEGFTPSRDATVVTRLLAAGATVAGKAVCEDL 144

Query: 191 MLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCG 250
             S     P  G   NPW   +  GGSSGG  AL+ +G     +G D GGSIR P+AFCG
Sbjct: 145 CFSGSSFTPASGPVRNPWDRQREAGGSSGGSAALVANGDVDFAIGGDQGGSIRIPAAFCG 204

Query: 251 ICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKAL 297
           + G KPT   +  +G     +        LGP+ R V   AL L  +
Sbjct: 205 VVGHKPTFGLVPYTG----AFPIERTIDHLGPITRTVHDAALMLSVI 247


>4N0I-A nrPDB
          Length = 464

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 13/212 (6%)

Query: 134 LYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLS 193
           L G   S+K+    K   +T    + E   S  D  VV++LK  G      TN+ +  + 
Sbjct: 44  LTGCVASIKDNIVTKDFPTTCASHILENFKSPFDATVVKLLKQAGVHILGKTNLDEFGMG 103

Query: 194 FDCSNPLFGQTMNP---WKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCG 250
               + + G  +NP    +  K  GGSS G  A +        LGTD GGS+R P+ +  
Sbjct: 104 SGGVHSIRGPVINPLYPHEDKKIMGGSSSGAAASVACDLVDFALGTDTGGSVRLPACYGS 163

Query: 251 ICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVP 310
           + G KP+  RLS+ G+    Y Q+    ++G +++ +  L      L  +     DPT  
Sbjct: 164 VLGFKPSYGRLSRFGV--IAYSQSLD--TVGILSKKINVLRKVFHTL--DKYDMKDPTSL 217

Query: 311 PLPFREEV---YRSSRPLRVGYY-ETDNYTMP 338
            +  RE +    +  RPL+VG   E  + +MP
Sbjct: 218 SVELRELIEGNKKVRRPLKVGIVKEFSHESMP 249


>4GYR-A nrPDB
          Length = 621

 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 61/138 (44%), Gaps = 11/138 (7%)

Query: 134 LYGVPVSLKECFSYKGHDSTLGLSLNEGMPS-----ESDCVVVQVLKLQGAVPFVHTNVP 188
           LYGVP      F+ K +    GL  +   P+     + D  VV  L+  GA+    TN+ 
Sbjct: 95  LYGVP------FAVKDNIDVAGLPCSAACPAFTYEPDRDATVVARLRAAGAIVLGKTNLD 148

Query: 189 QSMLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAF 248
           Q       +   FG     +      GGSS G    + +G     LGTD  GS R P+AF
Sbjct: 149 QFATGLVGTRSPFGAPRCVFDQDYISGGSSSGSAVAVAAGLVAFSLGTDTAGSGRVPAAF 208

Query: 249 CGICGLKPTGNRLSKSGL 266
             + G+KPT   LS SG+
Sbjct: 209 NNLVGVKPTKGLLSTSGV 226


>3T7C-A nrPDB
          Length = 299

 Score = 32.0 bits (71), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 17/87 (19%)

Query: 239 GGSIRFPSAFCGICGLKPTGNRL-SKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKAL 297
           GGSI F S+  G+ G +  GN + SK GL G +     + L LGP  R++    +C  ++
Sbjct: 170 GGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMR---TMALELGP--RNIRVNIVCPSSV 224

Query: 298 LCEHLFTLDPTVPPLPFREEVYRSSRP 324
                        P+   E  YR  RP
Sbjct: 225 AT-----------PMLLNEPTYRMFRP 240


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

6MRG-A nrPDB                                                          949   0.0  
3H0L-A nrPDB                                                          309   2e-84
4YJI-A nrPDB                                                          287   1e-77
3KFU-E nrPDB                                                          267   8e-72
4WJ3-A nrPDB                                                          265   3e-71
5H6S-A nrPDB                                                          260   1e-69
2G5H-A nrPDB                                                          251   6e-67
3AL0-A nrPDB                                                          247   9e-66
6DII-A nrPDB                                                          230   2e-60
2DC0-A nrPDB                                                          226   2e-59
6C6G-A nrPDB                                                          222   3e-58
4N0I-A nrPDB                                                          215   4e-56
3A1K-A nrPDB                                                          208   4e-54
3A2Q-A nrPDB                                                          196   3e-50
1O9P-A nrPDB                                                          188   5e-48
4GYR-A nrPDB                                                          157   1e-38

Sequences not found previously or not previously below threshold:

2ZXX-A nrPDB                                                           34   0.22 
1T2K-D nrPDB                                                           34   0.27 
3C51-A nrPDB                                                           32   0.75 
4Z4L-A nrPDB                                                           29   4.8  
6GB2-Bd nrPDB                                                          29   7.2  


CONVERGED!
>6MRG-A nrPDB
          Length = 580

 Score =  949 bits (2453), Expect = 0.0,   Method: Composition-based stats.
 Identities = 542/548 (98%), Positives = 546/548 (99%)

Query: 32  TGRQKARGAATRARQKQRASLETMDKAVQRFRLQNPDLDSEALLTLPLLQLVQKLQSGEL 91
           TGRQKARGAATRARQKQRASLETMDKAVQRFRLQNPDLDSEALLTLPLLQLVQKLQSGEL
Sbjct: 33  TGRQKARGAATRARQKQRASLETMDKAVQRFRLQNPDLDSEALLTLPLLQLVQKLQSGEL 92

Query: 92  SPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQGLLYGVPVSLKECFSYKGHD 151
           SPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQGLLYGVPVSLKECFSYKGHD
Sbjct: 93  SPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQGLLYGVPVSLKECFSYKGHD 152

Query: 152 STLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLSFDCSNPLFGQTMNPWKSS 211
           STLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSM S+DCSNPLFGQTMNPWKSS
Sbjct: 153 STLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMFSYDCSNPLFGQTMNPWKSS 212

Query: 212 KSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCVY 271
           KSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCVY
Sbjct: 213 KSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCVY 272

Query: 272 GQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPPLPFREEVYRSSRPLRVGYYE 331
           GQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPPLPFREEVYRSSRPLRVGYYE
Sbjct: 273 GQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPPLPFREEVYRSSRPLRVGYYE 332

Query: 332 TDNYTMPSPAMRRALIETKQRLEAAGHTLIPFLPNNIPYALEVLSAGGLFSDGGRSFLQN 391
           TDNYTMPSPAMRRALIETKQRLEAAGHTLIPFLPNNIPYALEVLS GGLFSDGGRSFLQN
Sbjct: 333 TDNYTMPSPAMRRALIETKQRLEAAGHTLIPFLPNNIPYALEVLSTGGLFSDGGRSFLQN 392

Query: 392 FKGDFVDPCLGDLILILRLPSWFKRLLSLLLKPLFPRLAAFLNSMRPRSAEKLWKLQHEI 451
           FKGDFVDPCLGDLILILRLPSWFKRLLSLLLKPLFPRLAAFLN+MRPRSAEKLWKLQHEI
Sbjct: 393 FKGDFVDPCLGDLILILRLPSWFKRLLSLLLKPLFPRLAAFLNNMRPRSAEKLWKLQHEI 452

Query: 452 EMYRQSVIAQWKAMNLDVLLTPMLGPALDLNTPGRATGAISYTVLYNCLDFPAGVVPVTT 511
           EMYRQSVIAQWKAMNLDVLLTPMLGPALDLNTPGRATGA+SYT+LYNCLDFPAGVVPVTT
Sbjct: 453 EMYRQSVIAQWKAMNLDVLLTPMLGPALDLNTPGRATGAVSYTMLYNCLDFPAGVVPVTT 512

Query: 512 VTAEDDAQMELYKGYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVEQL 571
           VTAEDDAQMELYKGYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVEQL
Sbjct: 513 VTAEDDAQMELYKGYFGDIWDIILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVEQL 572

Query: 572 MTPQKQPS 579
           MTPQKQPS
Sbjct: 573 MTPQKQPS 580


>3H0L-A nrPDB
          Length = 478

 Score =  309 bits (791), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 83/300 (27%), Positives = 147/300 (49%), Gaps = 13/300 (4%)

Query: 78  PLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQA--PRQGLLY 135
            L +L + L+ GE+SP+ V  ++  +  +  +      + L     + +++   R+  L+
Sbjct: 6   SLSELRELLKRGEVSPKEVVESFYDRYNQTEEKVKAYITPLYGKALKQAESLKERELPLF 65

Query: 136 GVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLSFD 195
           G+P+++K+    +G  +T    + E   +  D  V++ LK  GA+    TN+ +  +   
Sbjct: 66  GIPIAVKDNILVEGEKTTCASKILENFVAPYDATVIERLKKAGALIVGKTNLDEFAMGSS 125

Query: 196 CSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLK 255
                F  T NPW   + PGGSSGG  A +    +P+ LG+D GGSIR P++FCG+ G+K
Sbjct: 126 TEYSAFFPTKNPWDLERVPGGSSGGSAASVAVLSAPVSLGSDTGGSIRQPASFCGVIGIK 185

Query: 256 PTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALL-CEHLFTLDPTVPPLPF 314
           PT  R+S+ GL    +  +  Q  +G   R  E +AL L+ +   +   +    VP   +
Sbjct: 186 PTYGRVSRYGL--VAFASSLDQ--IGVFGRRTEDVALVLEVISGWDEKDSTSAKVPVPEW 241

Query: 315 REEVYRSSRPLRVGY-YETDNYTMPSPAMRRALIETKQRLEAAGHTL----IPFLPNNIP 369
            EEV +  + L++G   E   Y +  P ++ A     + LE  G  +    +P +  +IP
Sbjct: 242 SEEVKKEVKGLKIGLPKEFFEYEL-QPQVKEAFENFIKELEKEGFEIKEVSLPHVKYSIP 300


>4YJI-A nrPDB
          Length = 495

 Score =  287 bits (734), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 82/316 (25%), Positives = 129/316 (40%), Gaps = 17/316 (5%)

Query: 74  LLTLPLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTD--------CETQL 125
           +      ++V+ ++S ++SP  V  + +    + + G N V     D         E ++
Sbjct: 8   VHWKSAAEIVELVKSKQISPREVVESTIDLIEQRDPGLNAVVYKAYDEAREKAAALERRI 67

Query: 126 SQAPRQGLLYGVPVSLKECFSYK-GHDSTLG-LSLNEGMPSESDCVVVQVLKLQGA--VP 181
            Q    G+L GVP  +K+ F+ K G  STLG +   +     +       LK+ G   + 
Sbjct: 68  MQGEPVGMLAGVPTLMKDLFAAKPGWPSTLGGIRALKDARGAAGVWSTYPLKMSGEDSLL 127

Query: 182 FVHTNVPQSMLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGS 241
              TN P         N  FG T NP+    + GGSSGG  AL+  G  P+  GTD GG+
Sbjct: 128 LGQTNSPVYGFRGTTDNTFFGPTRNPFNLDFNAGGSSGGAAALVADGIVPVAGGTDGGGA 187

Query: 242 IRFPSAFCGICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEH 301
           IR P+A+    G +P+  R+         +      L  GP+ R V   AL +  L    
Sbjct: 188 IRIPAAWTNTYGFQPSIGRVPFKSRPNAFH--PGPYLYEGPITRTVRDAALAMNVLHGFD 245

Query: 302 LFTLDPTVPPLPFREEVYRSSRPLRVGYYETDNY-TMPSPAMRRALIETKQRLEAAGHTL 360
                     L F   + +  R  ++G   T NY   P     + LI    R+       
Sbjct: 246 RRDPASLRVKLDFTSALAQGVRGKKIGL--TLNYGVFPVQQEIQDLIGKAARVFTELGAH 303

Query: 361 IPFLPNNIPYALEVLS 376
           + F+   IPY+ + +S
Sbjct: 304 VEFVDLGIPYSQKQMS 319


>3KFU-E nrPDB
          Length = 471

 Score =  267 bits (683), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 97/295 (32%), Positives = 146/295 (49%), Gaps = 11/295 (3%)

Query: 81  QLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQG-LLYGVPV 139
           ++  ++  GE+SP  V   YL +  E++ G     S L +   + ++A   G  L G+ V
Sbjct: 5   EIRARVARGEVSPLEVAQAYLKRVQELDPGLGAFLS-LNERLLEEAEAVDPGLPLAGLVV 63

Query: 140 SLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLSFDCSNP 199
           ++K+  + +G  +T G  L E      +   V  LK  GA+    TN+ +  +     + 
Sbjct: 64  AVKDNIATRGLRTTAGSRLLENFVPPYEATAVARLKALGALVLGKTNLDEFGMGSSTEHS 123

Query: 200 LFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGN 259
            F  T NP+   + PGGSSGG  A + +  +PL LG+D GGS+R P+AFCG+ GLKPT  
Sbjct: 124 AFFPTKNPFDPDRVPGGSSGGSAAALAADLAPLALGSDTGGSVRQPAAFCGVYGLKPTYG 183

Query: 260 RLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPPLP--FREE 317
           R+S+ GL    Y  +  Q  +GPMAR V  LAL + A        LD T   LP  F+E 
Sbjct: 184 RVSRFGL--IAYASSLDQ--IGPMARSVRDLALLMDAAAGPD--PLDATSLDLPPRFQEA 237

Query: 318 VYRSSRPLRVGYYETDNYTMPSPAMRRALIETKQRLEAAGHTLIPFLPNNIPYAL 372
           +     PLR+G    +     SP + RAL E  +     G ++      ++P AL
Sbjct: 238 LEGPLPPLRLGVVR-EALAGNSPGVERALEEALKVFRELGLSVREVSWPSLPQAL 291


>4WJ3-A nrPDB
          Length = 484

 Score =  265 bits (678), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 83/310 (26%), Positives = 134/310 (43%), Gaps = 20/310 (6%)

Query: 74  LLTLPLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQ-- 131
           L  L L ++ + L   + S E +  T LG+  +++   N   S   D     ++A  +  
Sbjct: 2   LHQLTLAEIARALADKQFSAEELTRTLLGRIRQLDPQLNSFISITDDLAIAQAKAADERR 61

Query: 132 -----GLLYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTN 186
                G L G P++ K+ F  +G  ++ G  + +   S  D  VV+ L   GAV     N
Sbjct: 62  ANGENGALLGAPIAHKDLFCTQGVRTSCGSKMLDNFVSPYDATVVEKLTAAGAVTLGKLN 121

Query: 187 VPQSMLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPS 246
           + +  +     +  +G   NPW   + PGGSSGG  A + +   P   GTD GGSIR P+
Sbjct: 122 MDEFAMGSSNQSSHYGAVKNPWSLDRVPGGSSGGSAAAVAARLLPAATGTDTGGSIRQPA 181

Query: 247 AFCGICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFTLD 306
           A   + G+KPT  R+S+ G+    Y  +  Q   GP+AR  E  AL L  +        D
Sbjct: 182 ALTNLTGIKPTYGRVSRWGM--IAYASSLDQ--GGPLARTAEDCALMLGVMAG--FDPKD 235

Query: 307 PTV---PPLPFREEVYRSSRPLRVGYYETDNYTMPSPAMRRALIETKQRLEAAGHTL--- 360
            T    P   +   + +    LR+G             +  A++   + L+  G T+   
Sbjct: 236 STSVEQPVDDYLAALQKPLSGLRIGLPREYFGAGLDSRIADAVLAVVEELKTLGATVKDI 295

Query: 361 -IPFLPNNIP 369
            +P + + IP
Sbjct: 296 SLPNMQHAIP 305


>5H6S-A nrPDB
          Length = 481

 Score =  260 bits (664), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 76/297 (25%), Positives = 132/297 (44%), Gaps = 15/297 (5%)

Query: 77  LPLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQ----- 131
           L   ++  ++  G  S E V   +L +  E N  TN       D   + ++A  +     
Sbjct: 29  LTATEIRARISEGAASREEVVHEHLDRIDEFNALTNSFVELRADQVLEEARAADREFGST 88

Query: 132 --GLLYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQ 189
             G L GVP+S+K+ +S  G   T GL +N  +    D V    L+  G +   H  +P 
Sbjct: 89  LGGPLDGVPLSIKDSYSVAGLHRTDGLPVNADVLDAQDDVATARLRAAGGLVLGHAGIPD 148

Query: 190 SMLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFC 249
             + ++  + L+G   NP   S++ GGSSGG+ A + +G + +GLG D+GGSIR P+++C
Sbjct: 149 LCIRWNSVSGLYGAVRNPRDLSRTAGGSSGGDAANVAAGFATIGLGGDLGGSIRVPASWC 208

Query: 250 GICGLKPTGNRLSKSGLKGCVYGQTAVQL--SLGPMARDVESLALCLKALLCEHLFTLDP 307
           G+ G +    R+      G       ++L   +GP+AR ++ + L  + +        D 
Sbjct: 209 GVYGFRTGPGRIPDVNPNGGRSRNVVMELMAQIGPIARSIDDIELAFRIMTGVDR--RDT 266

Query: 308 TVPPLPFREEVYRSSRPLRVGYYETDNYTMPSPAMRRALIETKQRLEAAGHTLIPFL 364
              PL   E +       RV     +   +   ++   L  T + L A G+ +   +
Sbjct: 267 MSSPLGLIEPIEAP----RVAVLRHETGAVLDSSVEEQLDATIEMLRAEGYVVEENV 319


>2G5H-A nrPDB
          Length = 485

 Score =  251 bits (641), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 75/305 (24%), Positives = 136/305 (44%), Gaps = 17/305 (5%)

Query: 78  PLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTD------CETQLSQAPRQ 131
            +  L+  ++  ++ P  V         E +       +   +       E    QA  Q
Sbjct: 7   SVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDELQAKDQ 66

Query: 132 --GLLYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQ 189
             G L+G+P+ +K+     G ++T    + EG     +  V++ L  + AV     N+ +
Sbjct: 67  MDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHKENAVLIGKLNMDE 126

Query: 190 SMLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFC 249
             +        F +T+NP+     PGGSSGG  A + +G  PL LG+D GGSIR P+A+C
Sbjct: 127 FAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPLSLGSDTGGSIRQPAAYC 186

Query: 250 GICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTV 309
           G+ G+KPT  R+S+ GL    +  +  Q  +GP+ R+V+  A+ L+A+    +       
Sbjct: 187 GVVGMKPTYGRVSRFGL--VAFASSLDQ--IGPLTRNVKDNAIVLEAISGADVNDSTSAP 242

Query: 310 P-PLPFREEVYRSSRPLRVGYYETDNYTMPSPAMRRALIETKQRLEAAGHTL----IPFL 364
              + F  E+ +  + L+V   +       +  ++ A+    + L++ G  +    +P  
Sbjct: 243 VDDVDFTSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNT 302

Query: 365 PNNIP 369
              IP
Sbjct: 303 KFGIP 307


>3AL0-A nrPDB
          Length = 475

 Score =  247 bits (631), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 67/293 (22%), Positives = 117/293 (39%), Gaps = 13/293 (4%)

Query: 80  LQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQGLLYGVPV 139
           L + + L+  E   E +    L     ++       S       +     ++G  +G+PV
Sbjct: 9   LTIEECLKLSEEEREKLPQLSLETIKRLDPHVKAFIS-----VRENVSVEKKGKFWGIPV 63

Query: 140 SLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLSFDCSNP 199
           ++K+     G  +T    + E   S  D  VV+ +K  G V     N+ +  +       
Sbjct: 64  AIKDNILTLGMRTTCASRILENYESVFDATVVKKMKEAGFVVVGKANLDEFAMGSSTERS 123

Query: 200 LFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGN 259
            F  T NPW   + PGGSSGG  A + +G     LG+D GGS+R P++ CG+ G KPT  
Sbjct: 124 AFFPTRNPWDLERVPGGSSGGSAAAVSAGMVVAALGSDTGGSVRQPASLCGVVGYKPTYG 183

Query: 260 RLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPPLPFREEVY 319
            +S+ GL    +  +  Q  +GP+ + V   A+ ++ +              + F  E+ 
Sbjct: 184 LVSRYGL--VAFASSLDQ--IGPITKTVRDAAILMEIISGRDENDATTVNRKVDFLSEIE 239

Query: 320 RSSRPLRVGYYETDNYTMPSPAMRRALIETKQRLEAAGHTL----IPFLPNNI 368
                ++    E          +     E  + LE  G  +    IP +  ++
Sbjct: 240 EGVSGMKFAVPEEIYEHDIEEGVSERFEEALKLLERLGAKVERVKIPHIKYSV 292


>6DII-A nrPDB
          Length = 636

 Score =  230 bits (586), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 120/522 (22%), Positives = 192/522 (36%), Gaps = 91/522 (17%)

Query: 87  QSGELSPEAVFFTYLGKAWEVNKGT-----------NCVTSYLTDCETQLSQAPRQGLLY 135
           +S   +P  V    +    E                N V         +  Q     +L 
Sbjct: 139 RSKLTTPLQVAKRIISIIEEFGYDKPPTPFLIRFDANEVIKQAEASTRRFEQGNPISVLD 198

Query: 136 GVPVSLKECFSYKGHDSTLGLS-LNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLSF 194
           G+ V++K+      H +  G + L+E    E D  VV  L+  GA+     N+ +  +  
Sbjct: 199 GIFVTIKDDIDCLPHPTNGGTTWLHEDRSVEKDSAVVSKLRSCGAILLGKANMHELGMGT 258

Query: 195 DCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGL 254
             +N  +G T NP    +  GGSS G  A++ +G     LGTD GGS+R PSA CGI GL
Sbjct: 259 TGNNSNYGTTRNPHDPKRYTGGSSSGSAAIVAAGLCSAALGTDGGGSVRIPSALCGITGL 318

Query: 255 KPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLC---EHLFTLDPTVPP 311
           K T  R   +G   C  G   +   +GP+A  +E   L   A+L       + L P+ P 
Sbjct: 319 KTTYGRTDMTG-SLCEGGTVEI---IGPLASSLEDAFLVYAAILGSSSADRYNLKPSPPC 374

Query: 312 LP--FREEVYRSSRPLRVGYYETDNYTMPSPAMRRALIETKQRLEAAGHTLIPFLPNNIP 369
            P         +   LR+G Y      + S  +     +  + L       +  +   +P
Sbjct: 375 FPKLLSHNGSNAIGSLRLGKYTKWFNDVSSSDISDKCEDILKLLSNNHGCKV--VEIVVP 432

Query: 370 YALEVLSAGGLFSDGGRSFLQNFKGDFVDPCLGDLILILRLPSWFKRLLSLLLKPLFPRL 429
             LE + A  + S G              P L  L          K  LS   +  F   
Sbjct: 433 -ELEEMRAAHVISIG-------------SPTLSSLTPYCEAGKNSK--LSYDTRTSFAIF 476

Query: 430 AAFLNSMRPRSAEKLWK--LQHEIEMYRQSVIAQWKAMNLDVLLTPMLGPALDLNTPGR- 486
            +F ++    +A+ L +  +++ + +++          ++DV++TP  G    +  P   
Sbjct: 477 RSF-SASDYIAAQCLRRRLMEYHLNIFK----------DVDVIVTPTTGMTAPVIPPDAL 525

Query: 487 ---------ATGAISYTVLYNCLDFPAGVVPVTTVTAEDDAQMELYKGYFGDIWDIILKK 537
                     T  + + +  N L FPA  VPV               GY           
Sbjct: 526 KNGETNIQVTTDLMRFVLAANLLGFPAISVPV---------------GY----------- 559

Query: 538 AMKNSVGLPVAVQCVALPWQEELCLRFMREVEQLMTPQKQPS 579
              +  GLP+ +Q +  PW E   L     VE+L    K+P+
Sbjct: 560 ---DKEGLPIGLQIMGRPWAEATVLGLAAAVEELAPVTKKPA 598


>2DC0-A nrPDB
          Length = 434

 Score =  226 bits (576), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 69/252 (27%), Positives = 106/252 (42%), Gaps = 18/252 (7%)

Query: 77  LPLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTD--------CETQLSQA 128
           + LL+  + L++G  +P A+    L +A    +  N +     +           +L + 
Sbjct: 1   MDLLEAKRLLETGRTTPLALLEEALERAKAF-QDRNALAYLDEEAARKEALALTEELRRG 59

Query: 129 PRQGLLYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVP 188
             +G L+G+P+++K+ F  KG  +  G       P   +   V+ L+  GA+ F  TN+ 
Sbjct: 60  QVRGPLHGLPLTVKDLFPVKGMPTRAGTKAPLP-PLPEEARAVRRLREAGALLFAKTNMH 118

Query: 189 QSMLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAF 248
           +  L     NP  G   N    S+  GGSSGG    +  G     LGTD GGSIR P+ F
Sbjct: 119 EIALGITGENPWTGPVRNAVDPSRQAGGSSGGSAVAVALGIGLASLGTDTGGSIRIPAGF 178

Query: 249 CGICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPT 308
            G+ G KP+  R+S  G        +      GP+ R V       + L  E +      
Sbjct: 179 NGVVGFKPSYGRVSLEG----ALPLSRSTDHAGPLTRSVRDAHFLTEILAGESIPLEGVQ 234

Query: 309 VP----PLPFRE 316
            P    PL F E
Sbjct: 235 NPVFGVPLDFLE 246


>6C6G-A nrPDB
          Length = 457

 Score =  222 bits (566), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 140/512 (27%), Positives = 207/512 (40%), Gaps = 101/512 (19%)

Query: 80  LQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLS--------QAPRQ 131
           +++++ + SG  S   V    L      +   N  T    +     +        +    
Sbjct: 4   VEIIEGIASGRTSARDVCEEALATIGATDGLINAFTCRTVERARAEADAIDVRRARGEVL 63

Query: 132 GLLYGVPVSLKECFSYKGHDSTLGLSLNEGMPS-ESDCVVVQVLKLQGAVPFVHTNVPQS 190
             L G+P ++K  F  +G  +  G  +N  +P   +D V+VQ LK  GAV     N+ + 
Sbjct: 64  PPLAGLPYAVKNLFDIEGVTTLAGSKINRTLPPARADAVLVQRLKAAGAVLLGGLNMDEF 123

Query: 191 MLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCG 250
              F   N  +G T NP  + +  GGSSGG GA I +G  PL LG+D  GSIR P++ CG
Sbjct: 124 AYGFTTENTHYGPTRNPHDTGRIAGGSSGGSGAAIAAGQVPLSLGSDTNGSIRVPASLCG 183

Query: 251 ICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDP--- 307
           + GLKPT  RLS+ G    V+        LGP+A  VE LAL   A+       LDP   
Sbjct: 184 VWGLKPTFGRLSRRGTYPFVHSI----DHLGPLADSVEGLALAYDAMQGPD--PLDPGCS 237

Query: 308 TVPPLPFREEVYRSSRPLRVGYYETDNYTMPSPAMRRALIETKQRLEAAGHTLIPFLPNN 367
                P    + +    LR+G           PA R A+      L A+   + P     
Sbjct: 238 ASRIQPSVPVLSQGIAGLRIGVLGGWFRDNAGPAARAAVDVAALTLGASEVVMWPDAEIG 297

Query: 368 IPYALEVLSAGG--LFSDGGRSFLQNFKGDFVDPCLGDLILILRLPSWFKRLLSLLLKPL 425
              A  + ++ G  L  D  R   Q+F+   VD                 R +S +L+P 
Sbjct: 298 RAAAFVITASEGGCLHLDDLRIRPQDFEPLSVD-----------------RFISGVLQP- 339

Query: 426 FPRLAAFLNSMRPRSAEKLWKLQHEIEMYRQSVIAQWKAMNLDVLL---TPMLGPA---- 478
              +A +L + R R             +YR  V A ++  + D+L+   TP+  PA    
Sbjct: 340 ---VAWYLRAQRFR------------RVYRDKVNALFR--DWDILIAPATPISAPAIGTE 382

Query: 479 -LDLNT---PGR-ATGAISYTVLYNCLDFPAG--VVPVTTVTAEDDAQMELYKGYFGDIW 531
            +++N    P R A G ++  V +      AG  VV   T   E+D              
Sbjct: 383 WIEVNGTRHPCRPAMGLLTQPVSF------AGCPVVAAPTWPGEND-------------- 422

Query: 532 DIILKKAMKNSVGLPVAVQCVALPWQEELCLR 563
                       G+P+ VQ +A PW E LCLR
Sbjct: 423 ------------GMPIGVQLIAAPWNESLCLR 442


>4N0I-A nrPDB
          Length = 464

 Score =  215 bits (548), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 80/320 (25%), Positives = 130/320 (40%), Gaps = 22/320 (6%)

Query: 97  FFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQGLLYGVPVSLKECFSYKGHDSTLGL 156
               + +        N  TS      +  ++   +  L G   S+K+    K   +T   
Sbjct: 7   LKESIERLSSFQSKYNIFTSINPSPYSITNKKGTKETLTGCVASIKDNIVTKDFPTTCAS 66

Query: 157 SLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLSFDCSNPLFGQTMN---PWKSSKS 213
            + E   S  D  VV++LK  G      TN+ +  +     + + G  +N   P +  K 
Sbjct: 67  HILENFKSPFDATVVKLLKQAGVHILGKTNLDEFGMGSGGVHSIRGPVINPLYPHEDKKI 126

Query: 214 PGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCVYGQ 273
            GGSS G  A +        LGTD GGS+R P+ +  + G KP+  RLS+ G+    Y Q
Sbjct: 127 MGGSSSGAAASVACDLVDFALGTDTGGSVRLPACYGSVLGFKPSYGRLSRFGV--IAYSQ 184

Query: 274 TAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPPLPFREEV---YRSSRPLRVGYY 330
           +    ++G +++ +  L      L  +     DPT   +  RE +    +  RPL+VG  
Sbjct: 185 SLD--TVGILSKKINVLRKVFHTL--DKYDMKDPTSLSVELRELIEGNKKVRRPLKVGIV 240

Query: 331 -ETDNYTMPSPAMRRALIETKQRLEAAGHTL----IPFLPNNIP--YALEVLSAGGLFS- 382
            E  + +MP     R  +   ++L   G  +    IP + N +P  Y L    A    S 
Sbjct: 241 KEFSHESMPI-GFHRLYLSLLEKLINLGLEIYPVSIPSVKNCLPIYYTLSPAEAASNLSR 299

Query: 383 -DGGRSFLQNFKGDFVDPCL 401
            DG R   ++ + D  D  L
Sbjct: 300 YDGIRYGYRDSELDIKDGIL 319


>3A1K-A nrPDB
          Length = 521

 Score =  208 bits (530), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 83/336 (24%), Positives = 123/336 (36%), Gaps = 24/336 (7%)

Query: 54  TMDKAVQRFRLQNPDLDSEALLTLPLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNC 113
           T+DK     RL+ P L   AL +     +V +L + E +P      +   +   N  +  
Sbjct: 21  TLDKTA---RLEWPALIDGALGSY---DVVDQLYADEATPPTTSREHAVPSASENPLSAW 74

Query: 114 VTSYLTDCETQLSQAPRQGLLYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQV 173
             +      +        G+L G  V++K+  +  G     G    EG     D  VV  
Sbjct: 75  YVTTSIPPTS-------DGVLTGRRVAIKDNVTVAGVPMMNGSRTVEGFTPSRDATVVTR 127

Query: 174 LKLQGAVPFVHTNVPQSMLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLG 233
           L   GA             S     P  G   NPW   +  GGSSGG  AL+ +G     
Sbjct: 128 LLAAGATVAGKAVCEDLCFSGSSFTPASGPVRNPWDRQREAGGSSGGSAALVANGDVDFA 187

Query: 234 LGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALC 293
           +G D GGSIR P+AFCG+ G KPT   +  +G     +        LGP+ R V   AL 
Sbjct: 188 IGGDQGGSIRIPAAFCGVVGHKPTFGLVPYTG----AFPIERTIDHLGPITRTVHDAALM 243

Query: 294 LKALLCEHL-FTLDPTVPPL-PFREEVYRSSRPLRVGYY-ETDNYTMPSPAMRRALIETK 350
           L  +                  +   +      LR+G   E   + +  P +  A+    
Sbjct: 244 LSVIAGRDGNDPRQADSVEAGDYLSTLDSDVDGLRIGIVREGFGHAVSQPEVDDAVRAAA 303

Query: 351 QRLEAAGHTLIPFLPNNIPYALEVLSAGGLF-SDGG 385
             L       +  +  NIP+ L       +  +DGG
Sbjct: 304 HSL-TEIGCTVEEV--NIPWHLHAFHIWNVIATDGG 336


>3A2Q-A nrPDB
          Length = 493

 Score =  196 bits (497), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 71/251 (28%), Positives = 105/251 (41%), Gaps = 6/251 (2%)

Query: 83  VQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQGLLYGVPVSLK 142
            + ++SGE+S   +    +     VN   N V   L +   + S+    G   GVP  LK
Sbjct: 14  AELVRSGEISRTELLEATIAHVQAVNPEINAVIIPLFEKARRESELA-SGPFAGVPYLLK 72

Query: 143 ECFSYKGHD---STLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLSFDCSNP 199
           +       D   S++      G  ++ D   VQ ++  G V    TN P+          
Sbjct: 73  DLTVVSQGDINTSSIKGMKESGYRADHDAYFVQRMRAAGFVLLGKTNTPEMGNQVTTEPE 132

Query: 200 LFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGN 259
            +G T NPW   +S GGSSGG GA + +  SP+  G D  G++R P++ CG+ GLKPT  
Sbjct: 133 AWGATRNPWNLGRSVGGSSGGSGAAVAAALSPVAHGNDAAGAVRIPASVCGVVGLKPTRG 192

Query: 260 RLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEH-LFTLDPTVPPLPFREEV 318
           R+S  G         A     G  AR V  +A  L  +       T        P+ + +
Sbjct: 193 RIS-PGPLVTDSDNVAGAAHEGLFARSVRDIAALLDVVSGHRPGDTFCAPTASRPYAQGI 251

Query: 319 YRSSRPLRVGY 329
             +   LRVG 
Sbjct: 252 SENPGSLRVGV 262


>1O9P-A nrPDB
          Length = 414

 Score =  188 bits (478), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 74/284 (26%), Positives = 115/284 (40%), Gaps = 28/284 (9%)

Query: 77  LPLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQGLLYG 136
           + L  L +++++GELSP A             K  +    +      Q S     G L G
Sbjct: 2   ISLADLQRRIETGELSPNAAIAQSHAAIEAREKEVHAFVRHDKSARAQAS-----GPLRG 56

Query: 137 VPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNVPQSMLSFDC 196
           + V +K+        + +G  +  G    SD  VV +LK  GA     T    +  +F  
Sbjct: 57  IAVGIKDIIDTANMPTEMGSEIYRGWQPRSDAPVVMMLKRAGATIIGKT----TTTAFAS 112

Query: 197 SNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKP 256
            +P    T+NP  +  SPGG+S G  A +G+G  PL LGT  GGS+  P+A+CG   +KP
Sbjct: 113 RDPT--ATLNPHNTGHSPGGASSGSAAAVGAGMIPLALGTQTGGSVIRPAAYCGTAAIKP 170

Query: 257 TGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDPTVPPLPFRE 316
           +   L   G+K   +       ++G      E LA  L A+                F  
Sbjct: 171 SFRMLPTVGVKCYSWA----LDTVGLFGARAEDLARGLLAMTGRS-----------EFSG 215

Query: 317 EVYRSSRPLRVGYYETDNYTMPSPAMRRALIETKQRLEAAGHTL 360
            V   ++  R+G    +      PA  + L    +  E AG ++
Sbjct: 216 IV--PAKAPRIGVVRQEFAGAVEPAAEQGLQAAIKAAERAGASV 257


>4GYR-A nrPDB
          Length = 621

 Score =  157 bits (397), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 111/459 (24%), Positives = 160/459 (34%), Gaps = 78/459 (16%)

Query: 75  LTLPLLQLVQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQA------ 128
           L++ L  +   L  G  + E V      +      G   V   L   E  L++A      
Sbjct: 32  LSMTLEGIQAFLAQGG-TIEQVVTEAYDRITRY--GDKAVWIALRPREEVLAEARALDAS 88

Query: 129 PRQG-LLYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPFVHTNV 187
           P  G  LYGVP ++K+     G   +           + D  VV  L+  GA+    TN+
Sbjct: 89  PATGKPLYGVPFAVKDNIDVAGLPCSAACPAF-TYEPDRDATVVARLRAAGAIVLGKTNL 147

Query: 188 PQSMLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSA 247
            Q       +   FG     +      GGSS G    + +G     LGTD  GS R P+A
Sbjct: 148 DQFATGLVGTRSPFGAPRCVFDQDYISGGSSSGSAVAVAAGLVAFSLGTDTAGSGRVPAA 207

Query: 248 FCGICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGPMARDVESLALCLKALLCEHLFTLDP 307
           F  + G+KPT   LS SG+      ++   +++   A  V    L  +          DP
Sbjct: 208 FNNLVGVKPTKGLLSTSGVVPAC--RSLDCVTV--FAASVAEGTLIRRIAEG--YDAADP 261

Query: 308 TVPPLPFREEVYRSSRPLRVGY-----YETDNYTMPSPAMRRALIETKQRLEAAGHTL-- 360
              P   R         LRVG       E    T  +   +RAL E    L+A    +  
Sbjct: 262 YSRPSQKRRL---PHVGLRVGVPRQDQREFYGNTAYAALYQRALDEMIS-LDAELVEIDF 317

Query: 361 IPFLP-----NNIPYALEVLSAGGLFSDGGRSFLQNFKGDFVDPCLGDLILILRLPSWFK 415
            PF          P+  E L A                       +GD   + R P  F 
Sbjct: 318 APFRDAAKLLYGGPWVAERLEA-----------------------VGD--HLSRAPDSFD 352

Query: 416 RLLSLLLKPLFPRLAAFLNSMRPRSAEKLWKLQHEIEMYRQSVIAQWKAMNLDVLLTPML 475
                      P + + + + +  SA   ++ Q+E+    Q   AQW  M  D+LL P  
Sbjct: 353 -----------PVVRSIVETAKTLSAVDAFRGQYELAALTQQANAQWARM--DILLLPT- 398

Query: 476 GPALD-----LNTPGRATGAIS-YTVLYNCLDFPAGVVP 508
            P +      +  P R    +  YT   N LD  A  VP
Sbjct: 399 APTIHKVEAVMADPVRLNSQLGHYTNFVNLLDCAAIAVP 437


>2ZXX-A nrPDB
          Length = 79

 Score = 33.9 bits (76), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 27/55 (49%)

Query: 34 RQKARGAATRARQKQRASLETMDKAVQRFRLQNPDLDSEALLTLPLLQLVQKLQS 88
          R+KA   A +  +K    +E  D  + R R +N DL   A     + +++++L +
Sbjct: 25 RRKALYEALKENEKLHKEIEQKDSEIARLRKENKDLAEVAEHVQYMAEVIERLSN 79


>1T2K-D nrPDB
          Length = 61

 Score = 33.5 bits (75), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 35 QKARGAATRARQKQRASLETMDKAVQRFRLQNPDLDSE-ALLTLPLLQLVQKL 86
          ++ R AA+R+RQK++  +++++K  +     N  L SE  LL   + QL Q L
Sbjct: 7  ERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLL 59


>3C51-A nrPDB
          Length = 543

 Score = 32.0 bits (71), Expect = 0.75,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 58/168 (34%), Gaps = 18/168 (10%)

Query: 236 TDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCVYGQTAVQLSL-----------GPM- 283
           +D+G ++   +      G   T   ++   L G  Y  +    +L           GP  
Sbjct: 331 SDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFR 390

Query: 284 --ARDVESLALCLKALLCEHLFTLDPTVPPLPFREEVYRSSRPLRVGYYETDNYTMPSPA 341
                VE+  L  + L     +    +     F E + +     R+G+ +     + +  
Sbjct: 391 ARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHP 450

Query: 342 MRRALIETKQRLEAAGHTLIPFLPNN-IPYALEVLSAGGLFSDGGRSF 388
           + R +     R   AG    PF+P++   YA  +   G   +  G +F
Sbjct: 451 LFRDI---SWRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFSTVKGVAF 495


>4Z4L-A nrPDB
          Length = 402

 Score = 29.3 bits (64), Expect = 4.8,   Method: Composition-based stats.
 Identities = 9/27 (33%), Positives = 17/27 (62%)

Query: 437 RPRSAEKLWKLQHEIEMYRQSVIAQWK 463
           R +++E LWK+  ++E     ++ QWK
Sbjct: 359 RRKNSEWLWKVNEDLEAVNMPIVEQWK 385


>6GB2-Bd nrPDB
          Length = 206

 Score = 28.9 bits (63), Expect = 7.2,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 45  RQKQRASLETMDKAVQRFRLQNPDLDSEA 73
           R   R+ LE  ++A+Q  RL +P+L +EA
Sbjct: 133 RSAIRSLLEAQEEALQELRLSSPELHAEA 161


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.310    0.134    0.380 

Lambda     K      H
   0.267   0.0409    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,164,570
Number of Sequences: 36641
Number of extensions: 921540
Number of successful extensions: 2467
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2367
Number of HSP's gapped (non-prelim): 60
length of query: 579
length of database: 10,336,785
effective HSP length: 102
effective length of query: 477
effective length of database: 6,599,403
effective search space: 3147915231
effective search space used: 3147915231
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 62 (28.5 bits)