BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P87306 (545 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5N9J-W nrPDB 1114 0.0 4H63-Q nrPDB 963 0.0 4GWP-B nrPDB 74 1e-13 3RJ1-B nrPDB 69 7e-12 3J1O-I nrPDB 65 8e-11 6DII-A nrPDB 31 1.1 4NAK-A nrPDB 29 5.2 >5N9J-W nrPDB Length = 545 Score = 1114 bits (2881), Expect = 0.0, Method: Compositional matrix adjust. Identities = 545/545 (100%), Positives = 545/545 (100%) Query: 1 MAEEANKDADISSLSLSLDPEIIGGQNNFLENNLQQIFQKIIQERGPFRDLKEEDLQKEL 60 MAEEANKDADISSLSLSLDPEIIGGQNNFLENNLQQIFQKIIQERGPFRDLKEEDLQKEL Sbjct: 1 MAEEANKDADISSLSLSLDPEIIGGQNNFLENNLQQIFQKIIQERGPFRDLKEEDLQKEL 60 Query: 61 QKESIKDESSAKSSETENVLEFATLDSKRNVNDTEVESMDSQAYKKELIEQIMIAQTECS 120 QKESIKDESSAKSSETENVLEFATLDSKRNVNDTEVESMDSQAYKKELIEQIMIAQTECS Sbjct: 61 QKESIKDESSAKSSETENVLEFATLDSKRNVNDTEVESMDSQAYKKELIEQIMIAQTECS 120 Query: 121 LALDMTSLLLSKFKENSIETISPFLKSTVPPSSLQFSRSQPPESKESDATLAKCWKEKSL 180 LALDMTSLLLSKFKENSIETISPFLKSTVPPSSLQFSRSQPPESKESDATLAKCWKEKSL Sbjct: 121 LALDMTSLLLSKFKENSIETISPFLKSTVPPSSLQFSRSQPPESKESDATLAKCWKEKSL 180 Query: 181 TSSCKFLFEAKERLTSVVETEHEYYTELVKVKEASWPLFNSQGSNHLSVQYSCLGGISLG 240 TSSCKFLFEAKERLTSVVETEHEYYTELVKVKEASWPLFNSQGSNHLSVQYSCLGGISLG Sbjct: 181 TSSCKFLFEAKERLTSVVETEHEYYTELVKVKEASWPLFNSQGSNHLSVQYSCLGGISLG 240 Query: 241 LGLIRMKPESKSFEVQSSLLYSQAALKISILNKDRDEIGSSTWSWPSQNCNSVLLKDIYK 300 LGLIRMKPESKSFEVQSSLLYSQAALKISILNKDRDEIGSSTWSWPSQNCNSVLLKDIYK Sbjct: 241 LGLIRMKPESKSFEVQSSLLYSQAALKISILNKDRDEIGSSTWSWPSQNCNSVLLKDIYK 300 Query: 301 LQEILFEMDIWNSLLQEAQSCGNQGVNFTGDEILVPISDDHVVRITLETSSKNTESGFTE 360 LQEILFEMDIWNSLLQEAQSCGNQGVNFTGDEILVPISDDHVVRITLETSSKNTESGFTE Sbjct: 301 LQEILFEMDIWNSLLQEAQSCGNQGVNFTGDEILVPISDDHVVRITLETSSKNTESGFTE 360 Query: 361 DKKSNEDTSTNFVTIKQEKELLKCLCDTLNAIAHILFLKHCRKSDRRSQQPELYMAIDAN 420 DKKSNEDTSTNFVTIKQEKELLKCLCDTLNAIAHILFLKHCRKSDRRSQQPELYMAIDAN Sbjct: 361 DKKSNEDTSTNFVTIKQEKELLKCLCDTLNAIAHILFLKHCRKSDRRSQQPELYMAIDAN 420 Query: 421 APLILRPLIFYYNLNQESLEFQRWLKQRDISFKFMPNYPWEKAKDFLELENSLSINRLSI 480 APLILRPLIFYYNLNQESLEFQRWLKQRDISFKFMPNYPWEKAKDFLELENSLSINRLSI Sbjct: 421 APLILRPLIFYYNLNQESLEFQRWLKQRDISFKFMPNYPWEKAKDFLELENSLSINRLSI 480 Query: 481 SWRIMVSNFEPAIFIQHTPTLHGTDKSVWRCKDQYSSNQFSSLKNVCQYIEHHINSLSRR 540 SWRIMVSNFEPAIFIQHTPTLHGTDKSVWRCKDQYSSNQFSSLKNVCQYIEHHINSLSRR Sbjct: 481 SWRIMVSNFEPAIFIQHTPTLHGTDKSVWRCKDQYSSNQFSSLKNVCQYIEHHINSLSRR 540 Query: 541 SKKTE 545 SKKTE Sbjct: 541 SKKTE 545 >4H63-Q nrPDB Length = 469 Score = 963 bits (2489), Expect = 0.0, Method: Compositional matrix adjust. Identities = 468/468 (100%), Positives = 468/468 (100%) Query: 78 NVLEFATLDSKRNVNDTEVESMDSQAYKKELIEQIMIAQTECSLALDMTSLLLSKFKENS 137 NVLEFATLDSKRNVNDTEVESMDSQAYKKELIEQIMIAQTECSLALDMTSLLLSKFKENS Sbjct: 2 NVLEFATLDSKRNVNDTEVESMDSQAYKKELIEQIMIAQTECSLALDMTSLLLSKFKENS 61 Query: 138 IETISPFLKSTVPPSSLQFSRSQPPESKESDATLAKCWKEKSLTSSCKFLFEAKERLTSV 197 IETISPFLKSTVPPSSLQFSRSQPPESKESDATLAKCWKEKSLTSSCKFLFEAKERLTSV Sbjct: 62 IETISPFLKSTVPPSSLQFSRSQPPESKESDATLAKCWKEKSLTSSCKFLFEAKERLTSV 121 Query: 198 VETEHEYYTELVKVKEASWPLFNSQGSNHLSVQYSCLGGISLGLGLIRMKPESKSFEVQS 257 VETEHEYYTELVKVKEASWPLFNSQGSNHLSVQYSCLGGISLGLGLIRMKPESKSFEVQS Sbjct: 122 VETEHEYYTELVKVKEASWPLFNSQGSNHLSVQYSCLGGISLGLGLIRMKPESKSFEVQS 181 Query: 258 SLLYSQAALKISILNKDRDEIGSSTWSWPSQNCNSVLLKDIYKLQEILFEMDIWNSLLQE 317 SLLYSQAALKISILNKDRDEIGSSTWSWPSQNCNSVLLKDIYKLQEILFEMDIWNSLLQE Sbjct: 182 SLLYSQAALKISILNKDRDEIGSSTWSWPSQNCNSVLLKDIYKLQEILFEMDIWNSLLQE 241 Query: 318 AQSCGNQGVNFTGDEILVPISDDHVVRITLETSSKNTESGFTEDKKSNEDTSTNFVTIKQ 377 AQSCGNQGVNFTGDEILVPISDDHVVRITLETSSKNTESGFTEDKKSNEDTSTNFVTIKQ Sbjct: 242 AQSCGNQGVNFTGDEILVPISDDHVVRITLETSSKNTESGFTEDKKSNEDTSTNFVTIKQ 301 Query: 378 EKELLKCLCDTLNAIAHILFLKHCRKSDRRSQQPELYMAIDANAPLILRPLIFYYNLNQE 437 EKELLKCLCDTLNAIAHILFLKHCRKSDRRSQQPELYMAIDANAPLILRPLIFYYNLNQE Sbjct: 302 EKELLKCLCDTLNAIAHILFLKHCRKSDRRSQQPELYMAIDANAPLILRPLIFYYNLNQE 361 Query: 438 SLEFQRWLKQRDISFKFMPNYPWEKAKDFLELENSLSINRLSISWRIMVSNFEPAIFIQH 497 SLEFQRWLKQRDISFKFMPNYPWEKAKDFLELENSLSINRLSISWRIMVSNFEPAIFIQH Sbjct: 362 SLEFQRWLKQRDISFKFMPNYPWEKAKDFLELENSLSINRLSISWRIMVSNFEPAIFIQH 421 Query: 498 TPTLHGTDKSVWRCKDQYSSNQFSSLKNVCQYIEHHINSLSRRSKKTE 545 TPTLHGTDKSVWRCKDQYSSNQFSSLKNVCQYIEHHINSLSRRSKKTE Sbjct: 422 TPTLHGTDKSVWRCKDQYSSNQFSSLKNVCQYIEHHINSLSRRSKKTE 469 >4GWP-B nrPDB Length = 687 Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 79/271 (29%), Positives = 132/271 (48%), Gaps = 50/271 (18%) Query: 34 LQQIFQKIIQERGP---FRDLKEEDLQKELQKESIKDESSAKSSET-------ENVL--- 80 L+Q+ I+++RGP F DL E++LQ E+ K+ D S +SE ENV Sbjct: 99 LEQLIPIILRQRGPGFKFVDLNEKELQNEI-KQLGSDSSDGHNSEKKDTDGADENVQIGE 157 Query: 81 EFATLD---------------SKRNVN---DTEVESMDSQ----AYKKELIEQIMIAQTE 118 +F +D K N N D +E++ +Q +++++E I +A E Sbjct: 158 DFMEVDYEDKDNPVDSRNETDHKTNENGETDDNIETVMTQEQFVKRRRDMLEHINLAMNE 217 Query: 119 CSLALDMTSLLLSKFKENS-IETISPFLKSTVPPSSLQFSRSQ--PPESKE--SDATLAK 173 SLAL+ SLLLS KE++ + ++SPFL+ V PSSL + P KE L K Sbjct: 218 SSLALEFVSLLLSSVKESTGMSSMSPFLRKVVKPSSLNSDKIPYVAPTKKEYIELDILNK 277 Query: 174 CWKEKSLTSSCKFLFEAKERLTSVVETEHEYYTELVKVKEASWPLF----NSQGSNHLSV 229 WK +SL S L + +L+S+++ EH+Y+ ++++ +F + G L++ Sbjct: 278 GWKLQSLNESKDLLRASFNKLSSILQNEHDYWNKIMQSISNKDVIFKIRDRTSGQKLLAI 337 Query: 230 QYSCLGGISL-----GLGLIRMKPESKSFEV 255 +Y S G+ IR ES++ ++ Sbjct: 338 KYGYEDSGSTYKHDRGIANIRNNIESQNLDL 368 >3RJ1-B nrPDB Length = 583 Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 76/261 (29%), Positives = 125/261 (47%), Gaps = 50/261 (19%) Query: 44 ERGP---FRDLKEEDLQKELQKESIKDESSAKSSET-------ENVL---EFATLD---- 86 +RGP F DL E++LQ E+ K+ D S +SE ENV +F +D Sbjct: 12 QRGPGFKFVDLNEKELQNEI-KQLGSDSSDGHNSEKKDTDGADENVQIGEDFMEVDYEDK 70 Query: 87 -----------SKRNVN---DTEVESMDSQ----AYKKELIEQIMIAQTECSLALDMTSL 128 K N N D +E++ +Q +++++E I +A E SLAL+ SL Sbjct: 71 DNPVDSRNETDHKTNENGETDDNIETVMTQEQFVKRRRDMLEHINLAMNESSLALEFVSL 130 Query: 129 LLSKFKENS-IETISPFLKSTVPPSSLQFSR--SQPPESKESDA--TLAKCWKEKSLTSS 183 LLS KE++ + ++SPFL+ V PSSL + P KE L K WK +SL S Sbjct: 131 LLSSVKESTGMSSMSPFLRKVVKPSSLNSDKIPYVAPTKKEYIELDILNKGWKLQSLNES 190 Query: 184 CKFLFEAKERLTSVVETEHEYYTELVKVKEASWPLF----NSQGSNHLSVQYSCLGGISL 239 L + +L+S+++ EH+Y+ ++++ +F + G L+++Y S Sbjct: 191 KDLLRASFNKLSSILQNEHDYWNKIMQSISNKDVIFKIRDRTSGQKLLAIKYGYEDSGST 250 Query: 240 -----GLGLIRMKPESKSFEV 255 G+ IR ES++ ++ Sbjct: 251 YKHDRGIANIRNNIESQNLDL 271 >3J1O-I nrPDB Length = 484 Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 44/137 (32%), Positives = 76/137 (55%), Gaps = 9/137 (6%) Query: 105 KKELIEQIMIAQTECSLALDMTSLLLSKFKENS-IETISPFLKSTVPPSSLQFSR--SQP 161 +++++E I +A E SLAL+ SLLLS KE++ + ++SPFL+ V PSSL + Sbjct: 8 RRDMLEHINLAMNESSLALEFVSLLLSSVKESTGMSSMSPFLRKVVKPSSLNSDKIPYVA 67 Query: 162 PESKESDA--TLAKCWKEKSLTSSCKFLFEAKERLTSVVETEHEYYTELVKVKEASWPLF 219 P KE L K WK +SL S L + +L+S+++ EH+Y+ ++++ +F Sbjct: 68 PTKKEYIELDILNKGWKLQSLNESKDLLRASFNKLSSILQNEHDYWNKIMQSISNKDVIF 127 Query: 220 ----NSQGSNHLSVQYS 232 + G L+++Y Sbjct: 128 KIRDRTSGQKLLAIKYG 144 >6DII-A nrPDB Length = 636 Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust. Identities = 15/39 (38%), Positives = 24/39 (61%) Query: 413 LYMAIDANAPLILRPLIFYYNLNQESLEFQRWLKQRDIS 451 L A++ AP+ +P IFY LN EF+ +++Q+ IS Sbjct: 583 LAAAVEELAPVTKKPAIFYDILNTNKGEFEAYVEQKLIS 621 >4NAK-A nrPDB Length = 228 Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 8/94 (8%) Query: 156 FSRSQPPESKESDATLAKCWK------EKSLTSSCKFLFEAKERLTSVVET--EHEYYTE 207 F+ S+ PE KE ++ E+S+ F KER SV E + +E Sbjct: 40 FTFSRMPEVKEIVVVCDPFFRDIFEEYEESIDVDLSFAIPGKERQDSVYSGLQEIDVNSE 99 Query: 208 LVKVKEASWPLFNSQGSNHLSVQYSCLGGISLGL 241 LV + +++ PL N++ + S +G LG+ Sbjct: 100 LVCIHDSARPLVNTEDVEKVLKDGSAVGAAVLGV 133 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5N9J-W nrPDB 982 0.0 4H63-Q nrPDB 865 0.0 4GWP-B nrPDB 299 2e-81 3RJ1-B nrPDB 283 1e-76 3J1O-I nrPDB 226 1e-59 Sequences not found previously or not previously below threshold: 6DII-A nrPDB 32 0.72 3J9V-F nrPDB 32 0.82 3VR3-A nrPDB 32 0.92 5WOY-A nrPDB 31 1.3 3FHN-A nrPDB 31 1.3 4B8C-B nrPDB 30 1.9 4V7O-A5 nrPDB 29 4.2 4G65-A nrPDB 29 4.4 5GVV-A nrPDB 28 8.8 5W66-P nrPDB 28 9.8 CONVERGED! >5N9J-W nrPDB Length = 545 Score = 982 bits (2538), Expect = 0.0, Method: Composition-based stats. Identities = 545/545 (100%), Positives = 545/545 (100%) Query: 1 MAEEANKDADISSLSLSLDPEIIGGQNNFLENNLQQIFQKIIQERGPFRDLKEEDLQKEL 60 MAEEANKDADISSLSLSLDPEIIGGQNNFLENNLQQIFQKIIQERGPFRDLKEEDLQKEL Sbjct: 1 MAEEANKDADISSLSLSLDPEIIGGQNNFLENNLQQIFQKIIQERGPFRDLKEEDLQKEL 60 Query: 61 QKESIKDESSAKSSETENVLEFATLDSKRNVNDTEVESMDSQAYKKELIEQIMIAQTECS 120 QKESIKDESSAKSSETENVLEFATLDSKRNVNDTEVESMDSQAYKKELIEQIMIAQTECS Sbjct: 61 QKESIKDESSAKSSETENVLEFATLDSKRNVNDTEVESMDSQAYKKELIEQIMIAQTECS 120 Query: 121 LALDMTSLLLSKFKENSIETISPFLKSTVPPSSLQFSRSQPPESKESDATLAKCWKEKSL 180 LALDMTSLLLSKFKENSIETISPFLKSTVPPSSLQFSRSQPPESKESDATLAKCWKEKSL Sbjct: 121 LALDMTSLLLSKFKENSIETISPFLKSTVPPSSLQFSRSQPPESKESDATLAKCWKEKSL 180 Query: 181 TSSCKFLFEAKERLTSVVETEHEYYTELVKVKEASWPLFNSQGSNHLSVQYSCLGGISLG 240 TSSCKFLFEAKERLTSVVETEHEYYTELVKVKEASWPLFNSQGSNHLSVQYSCLGGISLG Sbjct: 181 TSSCKFLFEAKERLTSVVETEHEYYTELVKVKEASWPLFNSQGSNHLSVQYSCLGGISLG 240 Query: 241 LGLIRMKPESKSFEVQSSLLYSQAALKISILNKDRDEIGSSTWSWPSQNCNSVLLKDIYK 300 LGLIRMKPESKSFEVQSSLLYSQAALKISILNKDRDEIGSSTWSWPSQNCNSVLLKDIYK Sbjct: 241 LGLIRMKPESKSFEVQSSLLYSQAALKISILNKDRDEIGSSTWSWPSQNCNSVLLKDIYK 300 Query: 301 LQEILFEMDIWNSLLQEAQSCGNQGVNFTGDEILVPISDDHVVRITLETSSKNTESGFTE 360 LQEILFEMDIWNSLLQEAQSCGNQGVNFTGDEILVPISDDHVVRITLETSSKNTESGFTE Sbjct: 301 LQEILFEMDIWNSLLQEAQSCGNQGVNFTGDEILVPISDDHVVRITLETSSKNTESGFTE 360 Query: 361 DKKSNEDTSTNFVTIKQEKELLKCLCDTLNAIAHILFLKHCRKSDRRSQQPELYMAIDAN 420 DKKSNEDTSTNFVTIKQEKELLKCLCDTLNAIAHILFLKHCRKSDRRSQQPELYMAIDAN Sbjct: 361 DKKSNEDTSTNFVTIKQEKELLKCLCDTLNAIAHILFLKHCRKSDRRSQQPELYMAIDAN 420 Query: 421 APLILRPLIFYYNLNQESLEFQRWLKQRDISFKFMPNYPWEKAKDFLELENSLSINRLSI 480 APLILRPLIFYYNLNQESLEFQRWLKQRDISFKFMPNYPWEKAKDFLELENSLSINRLSI Sbjct: 421 APLILRPLIFYYNLNQESLEFQRWLKQRDISFKFMPNYPWEKAKDFLELENSLSINRLSI 480 Query: 481 SWRIMVSNFEPAIFIQHTPTLHGTDKSVWRCKDQYSSNQFSSLKNVCQYIEHHINSLSRR 540 SWRIMVSNFEPAIFIQHTPTLHGTDKSVWRCKDQYSSNQFSSLKNVCQYIEHHINSLSRR Sbjct: 481 SWRIMVSNFEPAIFIQHTPTLHGTDKSVWRCKDQYSSNQFSSLKNVCQYIEHHINSLSRR 540 Query: 541 SKKTE 545 SKKTE Sbjct: 541 SKKTE 545 >4H63-Q nrPDB Length = 469 Score = 865 bits (2234), Expect = 0.0, Method: Composition-based stats. Identities = 468/468 (100%), Positives = 468/468 (100%) Query: 78 NVLEFATLDSKRNVNDTEVESMDSQAYKKELIEQIMIAQTECSLALDMTSLLLSKFKENS 137 NVLEFATLDSKRNVNDTEVESMDSQAYKKELIEQIMIAQTECSLALDMTSLLLSKFKENS Sbjct: 2 NVLEFATLDSKRNVNDTEVESMDSQAYKKELIEQIMIAQTECSLALDMTSLLLSKFKENS 61 Query: 138 IETISPFLKSTVPPSSLQFSRSQPPESKESDATLAKCWKEKSLTSSCKFLFEAKERLTSV 197 IETISPFLKSTVPPSSLQFSRSQPPESKESDATLAKCWKEKSLTSSCKFLFEAKERLTSV Sbjct: 62 IETISPFLKSTVPPSSLQFSRSQPPESKESDATLAKCWKEKSLTSSCKFLFEAKERLTSV 121 Query: 198 VETEHEYYTELVKVKEASWPLFNSQGSNHLSVQYSCLGGISLGLGLIRMKPESKSFEVQS 257 VETEHEYYTELVKVKEASWPLFNSQGSNHLSVQYSCLGGISLGLGLIRMKPESKSFEVQS Sbjct: 122 VETEHEYYTELVKVKEASWPLFNSQGSNHLSVQYSCLGGISLGLGLIRMKPESKSFEVQS 181 Query: 258 SLLYSQAALKISILNKDRDEIGSSTWSWPSQNCNSVLLKDIYKLQEILFEMDIWNSLLQE 317 SLLYSQAALKISILNKDRDEIGSSTWSWPSQNCNSVLLKDIYKLQEILFEMDIWNSLLQE Sbjct: 182 SLLYSQAALKISILNKDRDEIGSSTWSWPSQNCNSVLLKDIYKLQEILFEMDIWNSLLQE 241 Query: 318 AQSCGNQGVNFTGDEILVPISDDHVVRITLETSSKNTESGFTEDKKSNEDTSTNFVTIKQ 377 AQSCGNQGVNFTGDEILVPISDDHVVRITLETSSKNTESGFTEDKKSNEDTSTNFVTIKQ Sbjct: 242 AQSCGNQGVNFTGDEILVPISDDHVVRITLETSSKNTESGFTEDKKSNEDTSTNFVTIKQ 301 Query: 378 EKELLKCLCDTLNAIAHILFLKHCRKSDRRSQQPELYMAIDANAPLILRPLIFYYNLNQE 437 EKELLKCLCDTLNAIAHILFLKHCRKSDRRSQQPELYMAIDANAPLILRPLIFYYNLNQE Sbjct: 302 EKELLKCLCDTLNAIAHILFLKHCRKSDRRSQQPELYMAIDANAPLILRPLIFYYNLNQE 361 Query: 438 SLEFQRWLKQRDISFKFMPNYPWEKAKDFLELENSLSINRLSISWRIMVSNFEPAIFIQH 497 SLEFQRWLKQRDISFKFMPNYPWEKAKDFLELENSLSINRLSISWRIMVSNFEPAIFIQH Sbjct: 362 SLEFQRWLKQRDISFKFMPNYPWEKAKDFLELENSLSINRLSISWRIMVSNFEPAIFIQH 421 Query: 498 TPTLHGTDKSVWRCKDQYSSNQFSSLKNVCQYIEHHINSLSRRSKKTE 545 TPTLHGTDKSVWRCKDQYSSNQFSSLKNVCQYIEHHINSLSRRSKKTE Sbjct: 422 TPTLHGTDKSVWRCKDQYSSNQFSSLKNVCQYIEHHINSLSRRSKKTE 469 >4GWP-B nrPDB Length = 687 Score = 299 bits (766), Expect = 2e-81, Method: Composition-based stats. Identities = 79/271 (29%), Positives = 132/271 (48%), Gaps = 50/271 (18%) Query: 34 LQQIFQKIIQERGP---FRDLKEEDLQKELQKESIKDESSAKSSET-------ENVL--- 80 L+Q+ I+++RGP F DL E++LQ E+ K+ D S +SE ENV Sbjct: 99 LEQLIPIILRQRGPGFKFVDLNEKELQNEI-KQLGSDSSDGHNSEKKDTDGADENVQIGE 157 Query: 81 EFATLD---------------SKRNVN---DTEVESMDSQ----AYKKELIEQIMIAQTE 118 +F +D K N N D +E++ +Q +++++E I +A E Sbjct: 158 DFMEVDYEDKDNPVDSRNETDHKTNENGETDDNIETVMTQEQFVKRRRDMLEHINLAMNE 217 Query: 119 CSLALDMTSLLLSKFKENS-IETISPFLKSTVPPSSLQFSR--SQPPESKESDA--TLAK 173 SLAL+ SLLLS KE++ + ++SPFL+ V PSSL + P KE L K Sbjct: 218 SSLALEFVSLLLSSVKESTGMSSMSPFLRKVVKPSSLNSDKIPYVAPTKKEYIELDILNK 277 Query: 174 CWKEKSLTSSCKFLFEAKERLTSVVETEHEYYTELVKVKEASWPLF----NSQGSNHLSV 229 WK +SL S L + +L+S+++ EH+Y+ ++++ +F + G L++ Sbjct: 278 GWKLQSLNESKDLLRASFNKLSSILQNEHDYWNKIMQSISNKDVIFKIRDRTSGQKLLAI 337 Query: 230 QYSCLGGISL-----GLGLIRMKPESKSFEV 255 +Y S G+ IR ES++ ++ Sbjct: 338 KYGYEDSGSTYKHDRGIANIRNNIESQNLDL 368 >3RJ1-B nrPDB Length = 583 Score = 283 bits (725), Expect = 1e-76, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 125/261 (47%), Gaps = 50/261 (19%) Query: 44 ERGP---FRDLKEEDLQKELQKESIKDESSAKSSET-------ENVL---EFATLD---- 86 +RGP F DL E++LQ E+ K+ D S +SE ENV +F +D Sbjct: 12 QRGPGFKFVDLNEKELQNEI-KQLGSDSSDGHNSEKKDTDGADENVQIGEDFMEVDYEDK 70 Query: 87 -----------SKRNVN---DTEVESMDSQ----AYKKELIEQIMIAQTECSLALDMTSL 128 K N N D +E++ +Q +++++E I +A E SLAL+ SL Sbjct: 71 DNPVDSRNETDHKTNENGETDDNIETVMTQEQFVKRRRDMLEHINLAMNESSLALEFVSL 130 Query: 129 LLSKFKENS-IETISPFLKSTVPPSSLQFSR--SQPPESKESDA--TLAKCWKEKSLTSS 183 LLS KE++ + ++SPFL+ V PSSL + P KE L K WK +SL S Sbjct: 131 LLSSVKESTGMSSMSPFLRKVVKPSSLNSDKIPYVAPTKKEYIELDILNKGWKLQSLNES 190 Query: 184 CKFLFEAKERLTSVVETEHEYYTELVKVKEASWPLF----NSQGSNHLSVQYSCLGGISL 239 L + +L+S+++ EH+Y+ ++++ +F + G L+++Y S Sbjct: 191 KDLLRASFNKLSSILQNEHDYWNKIMQSISNKDVIFKIRDRTSGQKLLAIKYGYEDSGST 250 Query: 240 -----GLGLIRMKPESKSFEV 255 G+ IR ES++ ++ Sbjct: 251 YKHDRGIANIRNNIESQNLDL 271 >3J1O-I nrPDB Length = 484 Score = 226 bits (577), Expect = 1e-59, Method: Composition-based stats. Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 14/167 (8%) Query: 103 AYKKELIEQIMIAQTECSLALDMTSLLLSKFKENS-IETISPFLKSTVPPSSLQFSR--S 159 +++++E I +A E SLAL+ SLLLS KE++ + ++SPFL+ V PSSL + Sbjct: 6 KRRRDMLEHINLAMNESSLALEFVSLLLSSVKESTGMSSMSPFLRKVVKPSSLNSDKIPY 65 Query: 160 QPPESKESDA--TLAKCWKEKSLTSSCKFLFEAKERLTSVVETEHEYYTELVKVKEASWP 217 P KE L K WK +SL S L + +L+S+++ EH+Y+ ++++ Sbjct: 66 VAPTKKEYIELDILNKGWKLQSLNESKDLLRASFNKLSSILQNEHDYWNKIMQSISNKDV 125 Query: 218 LF----NSQGSNHLSVQYSCLGGISL-----GLGLIRMKPESKSFEV 255 +F + G L+++Y S G+ IR ES++ ++ Sbjct: 126 IFKIRDRTSGQKLLAIKYGYEDSGSTYKHDRGIANIRNNIESQNLDL 172 >6DII-A nrPDB Length = 636 Score = 32.0 bits (71), Expect = 0.72, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 24/39 (61%) Query: 413 LYMAIDANAPLILRPLIFYYNLNQESLEFQRWLKQRDIS 451 L A++ AP+ +P IFY LN EF+ +++Q+ IS Sbjct: 583 LAAAVEELAPVTKKPAIFYDILNTNKGEFEAYVEQKLIS 621 >3J9V-F nrPDB Length = 517 Score = 31.6 bits (70), Expect = 0.82, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 35/186 (18%) Query: 326 VNFTGDEILVPISDDHVVRITLETSSKNTESG---FTEDKKSNEDTSTNFVTIKQEKELL 382 V FTG+ + +P+S+D + RI + S + ++G F ED + N +E++ Sbjct: 93 VEFTGESLRIPVSEDMLGRI-FDGSGRPIDNGPKVFAEDYLDINGSPINPYARIYPEEMI 151 Query: 383 K---CLCDTLNAIAH----ILF----LKH-------CRKSDRRSQQPELYMAIDANAPLI 424 DT+N+IA +F L H CR++ +++ + N ++ Sbjct: 152 STGVSAIDTMNSIARGQKIPIFSASGLPHNEIAAQICRQAGLVRPTKDVHDGHEENFSIV 211 Query: 425 LRPLIFYYNLNQESLEFQRWLKQRDISFKFMPNYPWEKAKDFLELENSLSINRLSISWRI 484 + +LE R+ KQ F N E+ FL L N +I R+ I+ R+ Sbjct: 212 FAAM-------GVNLETARFFKQ-----DFEENGSLERTSLFLNLANDPTIERI-ITPRL 258 Query: 485 MVSNFE 490 ++ E Sbjct: 259 ALTTAE 264 >3VR3-A nrPDB Length = 600 Score = 31.6 bits (70), Expect = 0.92, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 58/144 (40%), Gaps = 4/144 (2%) Query: 29 FLENNLQQIFQKIIQERGPFRDLKEEDLQKELQKESIKDESSAKSSETENVLEFATLDSK 88 +++ LQQ + ++ E R L+EE+ E+ + D S T V + D Sbjct: 451 YMDQILQQDWSDMVTE--GMRILQEEEQLNEIVRLVGIDSLSDNDRLTLEVAKSIREDYL 508 Query: 89 RNVNDTEVESMDSQAYKKELIEQIMIAQTECSLALDMTSLLLSKFKENSIETISPFLK-S 147 + +V++ S+ + +++ I+ E AL + + ++ E ++ + Sbjct: 509 QQNAFDDVDTFTSREKQFNMLKVILTFGKEARKALSLGA-YFNEIMEGTVAVRERISRSK 567 Query: 148 TVPPSSLQFSRSQPPESKESDATL 171 +P L S E KE+ + Sbjct: 568 YIPEEELAKISSINEEIKETIQLI 591 >5WOY-A nrPDB Length = 248 Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 22/123 (17%) Query: 1 MAEEANKDADI--SSLSLSLDPEIIGGQNNFLENNL---QQIFQKIIQERGPFRDLKEED 55 + E + A+I + L L+ DPE+I G N ++ L K+I++ E Sbjct: 62 LKEFGKEKAEIFEAHLMLASDPELIEGVENMIKTELVTADNAVNKVIEQNASVM----ES 117 Query: 56 LQKELQKESIKDESSAKSSETENVLEFATLDSKRNVNDTEVESM---------DSQAYKK 106 L E KE D + EN+L ++ N++D E E + D+ KK Sbjct: 118 LNDEYLKERAVDLRDVGNRIIENLLGVKSV----NLSDLEEEVVVIARDLTPSDTATMKK 173 Query: 107 ELI 109 E++ Sbjct: 174 EMV 176 >3FHN-A nrPDB Length = 706 Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 10/108 (9%) Query: 160 QPPESKESDATLAKCWKEKSLTSSC------KFLFEAKERLTSVVETEHEYYTELVKVKE 213 QPP+ D A K S+ ++ + A +L S V + Y +++ Sbjct: 113 QPPDQFTLDDVKALHSKLTSVFATVPQINNIDSQYAAYNKLKSKVTGK--YNDVIIQRLA 170 Query: 214 ASWPLFNSQGSNHLSVQYSCLGGISLGLGLIRMKPESKSFEVQSSLLY 261 +W N+ L Q+ S +GL++ E+ + Q SLLY Sbjct: 171 TNWS--NTFDQKLLEAQWDTQKFASTSVGLVKCLRENSTKLYQLSLLY 216 >4B8C-B nrPDB Length = 249 Score = 30.5 bits (67), Expect = 1.9, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 18/120 (15%) Query: 96 VESMDSQAYKKELIEQIMIAQTECSLALD---------MTSLLLSKFKENSIETISPFLK 146 + + D QA K+ ++ + +LAL+ +L+ +KEN +E + PF+ Sbjct: 116 LSTKDEQAIDKKHLKNLASWLGCITLALNKPIKHKNIAFREMLIEAYKENRLEIVVPFVT 175 Query: 147 STVPPSSLQFSRSQPPES------KESDATLAKC-WKEKSLTSSCKFLFEAKERLTSVVE 199 + +S + +PP K K WK SLT + L ++ T ++ Sbjct: 176 KILQRAS-ESKIFKPPNPWTVGILKLLIELNEKANWKL-SLTFEVEVLLKSFNLTTKSLK 233 >4V7O-A5 nrPDB Length = 799 Score = 29.3 bits (64), Expect = 4.2, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 35/102 (34%), Gaps = 10/102 (9%) Query: 117 TECSLALDMTSLLLSKFKENSIETISPFLKSTVPPSSLQFSRSQPPESKESDATLAKCWK 176 ++ SL +D + LLS +++ + P + S VP S+ + W Sbjct: 124 SKESLLVDTMNFLLSSLAPSTMMAVMPIVTSVVPYHYHIHSKII-----DYFPFCYSIWS 178 Query: 177 EKSLTSSCKFLFEAKERLTSVVETEHEYYTELVKVKEASWPL 218 S + + S+ + H +++ + + Sbjct: 179 SVSANVAIDTHMYDF--VGSISKDVH---NKILSSEHEKDVV 215 >4G65-A nrPDB Length = 461 Score = 29.3 bits (64), Expect = 4.4, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 5/86 (5%) Query: 22 IIGGQN--NFLENNLQQIFQKIIQERGPFRDLK-EEDLQKELQKESIKDESSAKSSETEN 78 I+GG N L L+Q + + ER R K E+L+ + D + + EN Sbjct: 240 IVGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEELENTIV--FCGDAADQELLTEEN 297 Query: 79 VLEFATLDSKRNVNDTEVESMDSQAY 104 + + + N ++T + S Sbjct: 298 IDQVDVFIALTNEDETNIMSAMLAKR 323 >5GVV-A nrPDB Length = 406 Score = 28.2 bits (61), Expect = 8.8, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 18/31 (58%) Query: 305 LFEMDIWNSLLQEAQSCGNQGVNFTGDEILV 335 LFE+D+ + L A+SC GV F +L+ Sbjct: 118 LFELDLGENYLAAARSCFGAGVGFNAGVLLI 148 >5W66-P nrPDB Length = 514 Score = 28.2 bits (61), Expect = 9.8, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 23/122 (18%) Query: 68 ESSAKSSETENVLEFATLDSKR----------NVNDTEVESMDSQAYKKELIEQIMI--- 114 S E LEF K+ N N + ++D + +++L + + Sbjct: 363 SSDYFQWSEEETLEFLKWMEKQFLPTQTKSLHNENGSMEMTIDQKIARRKLYKIFPLDRE 422 Query: 115 -----AQTECSLALDMTSLLLSKFKENSIETISPFLKSTVPPSSLQFSRSQPPESKESDA 169 + + L L ++ + + PF +S SL + + PP KE+ Sbjct: 423 ANHDGEFNDSTHQLTFIEDLQERYAKQT-----PFFESNKIRDSLNYQEANPPARKEAIG 477 Query: 170 TL 171 L Sbjct: 478 RL 479 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.130 0.359 Lambda K H 0.267 0.0403 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,634,046 Number of Sequences: 36641 Number of extensions: 745830 Number of successful extensions: 1671 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 1614 Number of HSP's gapped (non-prelim): 43 length of query: 545 length of database: 10,336,785 effective HSP length: 102 effective length of query: 443 effective length of database: 6,599,403 effective search space: 2923535529 effective search space used: 2923535529 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 61 (28.1 bits)