BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P87123
         (123 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3H0G-K nrPDB                                                          254   9e-69
3J1N-K nrPDB                                                          112   3e-26
6O9L-K nrPDB                                                          102   5e-23
6J4X-K nrPDB                                                           94   2e-20
2PMZ-L nrPDB                                                           50   3e-07
4QJV-B nrPDB                                                           49   4e-07
2WB1-L nrPDB                                                           49   5e-07
6CNF-K nrPDB                                                           43   4e-05
1XPP-A nrPDB                                                           39   4e-04
2PMZ-D nrPDB                                                           28   0.83 
1CLI-A nrPDB                                                           28   1.2  
2WB1-D nrPDB                                                           28   1.4  
2RF1-A nrPDB                                                           26   4.1  
1YFM-A nrPDB                                                           25   5.9  
3X0U-A nrPDB                                                           25   6.9  

>3H0G-K nrPDB
          Length = 123

 Score =  254 bits (648), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 123/123 (100%), Positives = 123/123 (100%)

Query: 1   MNQPERYELIELMGLPKVTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAGY 60
           MNQPERYELIELMGLPKVTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAGY
Sbjct: 1   MNQPERYELIELMGLPKVTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAGY 60

Query: 61  KVPHPLNHNFILRVQTVEDCSPKQVIVDAAKSLITHLEEIKVNFMREWELKMISVEGVEM 120
           KVPHPLNHNFILRVQTVEDCSPKQVIVDAAKSLITHLEEIKVNFMREWELKMISVEGVEM
Sbjct: 61  KVPHPLNHNFILRVQTVEDCSPKQVIVDAAKSLITHLEEIKVNFMREWELKMISVEGVEM 120

Query: 121 EFS 123
           EFS
Sbjct: 121 EFS 123


>3J1N-K nrPDB
          Length = 120

 Score =  112 bits (281), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 54/117 (46%), Positives = 75/117 (64%), Gaps = 1/117 (0%)

Query: 1   MNQPERYELIELM-GLPKVTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAG 59
           MN P+R+EL  L  G  K+  + D+K+PNA V+T EKEDHTL N++  +LL+D +VLFA 
Sbjct: 1   MNAPDRFELFLLGEGESKLKIDPDTKAPNAVVITFEKEDHTLGNLIRAELLNDRKVLFAA 60

Query: 60  YKVPHPLNHNFILRVQTVEDCSPKQVIVDAAKSLITHLEEIKVNFMREWELKMISVE 116
           YKV HP    F LR+QT E   PK  + +A  S+I  L  +K NF  EW L+ ++ +
Sbjct: 61  YKVEHPFFARFKLRIQTTEGYDPKDALKNACNSIINKLGALKTNFETEWNLQTLAAD 117


>6O9L-K nrPDB
          Length = 117

 Score =  102 bits (253), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 73/120 (60%), Gaps = 4/120 (3%)

Query: 1   MNQPERYELIELM-GLPKVTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAG 59
           MN P  +E   L  G  K+T   D+K PNA + T+ KEDHTL N++ +QLL D +VLFAG
Sbjct: 1   MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60

Query: 60  YKVPHPLNHNFILRVQTVEDCSPKQVIVDAAKSLITHLEEIKVNFMREWELKMISVEGVE 119
           YKVPHPL H  I+RVQT  D SP++   +A   LI+ L  ++  F    + K    EG+E
Sbjct: 61  YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQ---EGIE 117


>6J4X-K nrPDB
          Length = 118

 Score = 93.6 bits (231), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 49/116 (42%), Positives = 68/116 (58%), Gaps = 1/116 (0%)

Query: 1   MNQPERYELIELMG-LPKVTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAG 59
           MN P+R+EL  L   +PK+    DS+ PN  ++  E+EDHTLAN+L  +L     V F  
Sbjct: 1   MNAPDRFELFILPDDVPKLKITPDSRVPNCIIIKFEREDHTLANLLREELALYPDVTFVA 60

Query: 60  YKVPHPLNHNFILRVQTVEDCSPKQVIVDAAKSLITHLEEIKVNFMREWELKMISV 115
           YKV HPL  NF++R+QT E   PKQ +  A  S+I  L+ +   F  EW +K  S+
Sbjct: 61  YKVEHPLFANFVMRLQTEEGTRPKQALERACASIINKLKTLDHKFNEEWNIKNFSL 116


>2PMZ-L nrPDB
          Length = 92

 Score = 49.7 bits (117), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 4/72 (5%)

Query: 34  LEKEDHTLANMLANQLLSDERVLFAGYKVPHPLNHNFILRVQTVEDCSPKQVIVDA---A 90
           +E EDHTL N++A  L     V FA Y  PHPL+   I+++ T    +PK  ++ A    
Sbjct: 17  IEGEDHTLGNLIAGTLRRISGVSFASYYQPHPLSDKIIVKILTDGSITPKDALLKAIENI 76

Query: 91  KSLITH-LEEIK 101
           + + +H ++EIK
Sbjct: 77  RGMTSHYIDEIK 88


>4QJV-B nrPDB
          Length = 94

 Score = 49.3 bits (116), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)

Query: 34  LEKEDHTLANMLANQLLSDERVLFAGYKVPHPLNHNFILRVQTVED--CSPKQVIVDAAK 91
           LE EDHT AN+L   L  +E V FAGY + HP+      R + V D   +P++ + +AA+
Sbjct: 17  LEGEDHTFANLLTETLHENEHVTFAGYTIEHPITMARKPRFKVVTDGKITPEKALEEAAQ 76

Query: 92  SLITHLEEI 100
            +     E+
Sbjct: 77  KIFDRAREV 85


>2WB1-L nrPDB
          Length = 92

 Score = 48.9 bits (115), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 34/60 (56%)

Query: 34 LEKEDHTLANMLANQLLSDERVLFAGYKVPHPLNHNFILRVQTVEDCSPKQVIVDAAKSL 93
          +E EDHTL N++A  L     V FA Y  PHPL    I+++ T    +PK  ++ A +++
Sbjct: 17 IEGEDHTLGNLIAGTLRKISGVSFASYYQPHPLTDKIIVKILTDGSIAPKDALLKAIETV 76


>6CNF-K nrPDB
          Length = 142

 Score = 42.7 bits (99), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 40/81 (49%)

Query: 24  SKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAGYKVPHPLNHNFILRVQTVEDCSPK 83
           S+   +A   + +EDHTL N L   ++ +  V F GY +PHP  +   +R+QT  + +  
Sbjct: 55  SEDGTSASFQIVEEDHTLGNALRYVIMKNPDVEFCGYSIPHPSENLLNIRIQTYGETTAV 114

Query: 84  QVIVDAAKSLITHLEEIKVNF 104
             +    K L+   + ++  F
Sbjct: 115 DALQKGLKDLMDLCDVVESKF 135


>1XPP-A nrPDB
          Length = 115

 Score = 39.3 bits (90), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)

Query: 24  SKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAGYKVPHPLNHNFILRVQTVEDCSPK 83
           SK  N+  V +   D+TL   L  ++L D++V  A Y + HP+  N  + V+ V+   P+
Sbjct: 17  SKEKNSITVEMINYDNTLLRTLVEEILKDDQVDEARYYIKHPVIDNPQIYVR-VKSGKPQ 75

Query: 84  QVIVDAAKSLITHLEEIKVNFMREWE 109
             I  A + L    E++   F +E++
Sbjct: 76  SAIKRAVRKLSKLYEDLGTQFQKEFQ 101


>2PMZ-D nrPDB
          Length = 265

 Score = 28.5 bits (62), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 10/32 (31%), Positives = 24/32 (75%)

Query: 70  FILRVQTVEDCSPKQVIVDAAKSLITHLEEIK 101
           +IL +++V    P++++++A KS+I  +EE++
Sbjct: 226 YILEIESVGSLKPERILLEAGKSIIRKIEELE 257


>1CLI-A nrPDB
          Length = 345

 Score = 27.7 bits (60), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 50  LSDERVLFA-GYKVPHPLNHNFILRVQTVEDCSPKQVIVDAAKSLITHL 97
           +SD  VL A G   PH   ++ + ++  V  C P+   +D  K L  HL
Sbjct: 175 VSDGDVLIALGSSGPHSNGYSLVRKILEVSGCDPQTTELD-GKPLADHL 222


>2WB1-D nrPDB
          Length = 265

 Score = 27.7 bits (60), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 10/32 (31%), Positives = 24/32 (75%)

Query: 70  FILRVQTVEDCSPKQVIVDAAKSLITHLEEIK 101
           +IL +++V    P++++++A KS+I  +EE++
Sbjct: 226 YILELESVGSLKPERILLEAGKSIIRKIEELE 257


>2RF1-A nrPDB
          Length = 298

 Score = 26.2 bits (56), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 34  LEKEDHTLANMLANQLLSDERVLFAGYKVPHPLNHNFILRVQTVED 79
           +E  +  +   +A    S + ++F G++ PHP+N NF L   +  D
Sbjct: 152 VESSEQGMLAQVARAEKSGDPIVFLGWE-PHPMNANFKLTYLSGGD 196


>1YFM-A nrPDB
          Length = 488

 Score = 25.4 bits (54), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 7/55 (12%)

Query: 18  VTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAGYKVP----HPLNH 68
            + +LD   P   +V  +    T +NM AN+++S+  +   G K+     HP NH
Sbjct: 107 ASGKLDDHFP---LVVFQTGSGTQSNMNANEVISNRAIEILGGKIGSKQVHPNNH 158


>3X0U-A nrPDB
          Length = 446

 Score = 25.4 bits (54), Expect = 6.9,   Method: Composition-based stats.
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 32  VTLEKEDHTLANMLANQLLSDERVLFA-GYKVPHP 65
           V L+ E H +  MLA+Q  SD+   F+  Y++ HP
Sbjct: 397 VRLQLEGHFICGMLADQEGSDKVAAFSVAYELFHP 431


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

3H0G-K nrPDB                                                          170   1e-43
3J1N-K nrPDB                                                          157   9e-40
6J4X-K nrPDB                                                          152   2e-38
6O9L-K nrPDB                                                          144   1e-35
6CNF-K nrPDB                                                          100   2e-22
1XPP-A nrPDB                                                           97   2e-21
2PMZ-L nrPDB                                                           87   2e-18
2WB1-L nrPDB                                                           86   4e-18
4QJV-B nrPDB                                                           81   9e-17

Sequences not found previously or not previously below threshold:

5ZX3-A nrPDB                                                           29   0.79 
1BCC-A nrPDB                                                           28   0.96 
5XY3-e nrPDB                                                           27   2.0  
2O55-A nrPDB                                                           27   2.8  
6DW1-E nrPDB                                                           26   3.5  
3IFS-A nrPDB                                                           26   4.4  
2PLE-A nrPDB                                                           26   5.1  


CONVERGED!
>3H0G-K nrPDB
          Length = 123

 Score =  170 bits (431), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 123/123 (100%), Positives = 123/123 (100%)

Query: 1   MNQPERYELIELMGLPKVTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAGY 60
           MNQPERYELIELMGLPKVTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAGY
Sbjct: 1   MNQPERYELIELMGLPKVTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAGY 60

Query: 61  KVPHPLNHNFILRVQTVEDCSPKQVIVDAAKSLITHLEEIKVNFMREWELKMISVEGVEM 120
           KVPHPLNHNFILRVQTVEDCSPKQVIVDAAKSLITHLEEIKVNFMREWELKMISVEGVEM
Sbjct: 61  KVPHPLNHNFILRVQTVEDCSPKQVIVDAAKSLITHLEEIKVNFMREWELKMISVEGVEM 120

Query: 121 EFS 123
           EFS
Sbjct: 121 EFS 123


>3J1N-K nrPDB
          Length = 120

 Score =  157 bits (397), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 54/117 (46%), Positives = 75/117 (64%), Gaps = 1/117 (0%)

Query: 1   MNQPERYELIELM-GLPKVTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAG 59
           MN P+R+EL  L  G  K+  + D+K+PNA V+T EKEDHTL N++  +LL+D +VLFA 
Sbjct: 1   MNAPDRFELFLLGEGESKLKIDPDTKAPNAVVITFEKEDHTLGNLIRAELLNDRKVLFAA 60

Query: 60  YKVPHPLNHNFILRVQTVEDCSPKQVIVDAAKSLITHLEEIKVNFMREWELKMISVE 116
           YKV HP    F LR+QT E   PK  + +A  S+I  L  +K NF  EW L+ ++ +
Sbjct: 61  YKVEHPFFARFKLRIQTTEGYDPKDALKNACNSIINKLGALKTNFETEWNLQTLAAD 117


>6J4X-K nrPDB
          Length = 118

 Score =  152 bits (385), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 1/117 (0%)

Query: 1   MNQPERYELIELMG-LPKVTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAG 59
           MN P+R+EL  L   +PK+    DS+ PN  ++  E+EDHTLAN+L  +L     V F  
Sbjct: 1   MNAPDRFELFILPDDVPKLKITPDSRVPNCIIIKFEREDHTLANLLREELALYPDVTFVA 60

Query: 60  YKVPHPLNHNFILRVQTVEDCSPKQVIVDAAKSLITHLEEIKVNFMREWELKMISVE 116
           YKV HPL  NF++R+QT E   PKQ +  A  S+I  L+ +   F  EW +K  S+ 
Sbjct: 61  YKVEHPLFANFVMRLQTEEGTRPKQALERACASIINKLKTLDHKFNEEWNIKNFSLN 117


>6O9L-K nrPDB
          Length = 117

 Score =  144 bits (362), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/120 (45%), Positives = 73/120 (60%), Gaps = 4/120 (3%)

Query: 1   MNQPERYELIELM-GLPKVTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAG 59
           MN P  +E   L  G  K+T   D+K PNA + T+ KEDHTL N++ +QLL D +VLFAG
Sbjct: 1   MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG 60

Query: 60  YKVPHPLNHNFILRVQTVEDCSPKQVIVDAAKSLITHLEEIKVNFMREWELKMISVEGVE 119
           YKVPHPL H  I+RVQT  D SP++   +A   LI+ L  ++  F    + K    EG+E
Sbjct: 61  YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQ---EGIE 117


>6CNF-K nrPDB
          Length = 142

 Score = 99.8 bits (247), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 45/93 (48%)

Query: 17  KVTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAGYKVPHPLNHNFILRVQT 76
           K+  +  S+   +A   + +EDHTL N L   ++ +  V F GY +PHP  +   +R+QT
Sbjct: 48  KLLTQATSEDGTSASFQIVEEDHTLGNALRYVIMKNPDVEFCGYSIPHPSENLLNIRIQT 107

Query: 77  VEDCSPKQVIVDAAKSLITHLEEIKVNFMREWE 109
             + +    +    K L+   + ++  F  + +
Sbjct: 108 YGETTAVDALQKGLKDLMDLCDVVESKFTEKIK 140


>1XPP-A nrPDB
          Length = 115

 Score = 96.7 bits (239), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)

Query: 24  SKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAGYKVPHPLNHNFILRVQTVEDCSPK 83
           SK  N+  V +   D+TL   L  ++L D++V  A Y + HP+  N  + V+ V+   P+
Sbjct: 17  SKEKNSITVEMINYDNTLLRTLVEEILKDDQVDEARYYIKHPVIDNPQIYVR-VKSGKPQ 75

Query: 84  QVIVDAAKSLITHLEEIKVNFMREWE 109
             I  A + L    E++   F +E++
Sbjct: 76  SAIKRAVRKLSKLYEDLGTQFQKEFQ 101


>2PMZ-L nrPDB
          Length = 92

 Score = 87.1 bits (214), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 37/68 (54%)

Query: 26 SPNAAVVTLEKEDHTLANMLANQLLSDERVLFAGYKVPHPLNHNFILRVQTVEDCSPKQV 85
            N   + +E EDHTL N++A  L     V FA Y  PHPL+   I+++ T    +PK  
Sbjct: 9  ESNYLELEIEGEDHTLGNLIAGTLRRISGVSFASYYQPHPLSDKIIVKILTDGSITPKDA 68

Query: 86 IVDAAKSL 93
          ++ A +++
Sbjct: 69 LLKAIENI 76


>2WB1-L nrPDB
          Length = 92

 Score = 85.9 bits (211), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 36/68 (52%)

Query: 26 SPNAAVVTLEKEDHTLANMLANQLLSDERVLFAGYKVPHPLNHNFILRVQTVEDCSPKQV 85
            N   + +E EDHTL N++A  L     V FA Y  PHPL    I+++ T    +PK  
Sbjct: 9  ESNYLELEIEGEDHTLGNLIAGTLRKISGVSFASYYQPHPLTDKIIVKILTDGSIAPKDA 68

Query: 86 IVDAAKSL 93
          ++ A +++
Sbjct: 69 LLKAIETV 76


>4QJV-B nrPDB
          Length = 94

 Score = 81.3 bits (199), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 2/94 (2%)

Query: 18  VTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAGYKVPHPLNHNFILRVQ-- 75
           +  E+  +  N     LE EDHT AN+L   L  +E V FAGY + HP+      R +  
Sbjct: 1   MRIEVIRREENLLEFYLEGEDHTFANLLTETLHENEHVTFAGYTIEHPITMARKPRFKVV 60

Query: 76  TVEDCSPKQVIVDAAKSLITHLEEIKVNFMREWE 109
           T    +P++ + +AA+ +     E+   +    E
Sbjct: 61  TDGKITPEKALEEAAQKIFDRAREVLEAWKAAIE 94


>5ZX3-A nrPDB
          Length = 368

 Score = 28.5 bits (62), Expect = 0.79,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 8/54 (14%)

Query: 67  NHNFILRVQTVEDCSPKQVIVDAAKSLITHLEEIKVNFMREWELKMISVEGVEM 120
               IL V+T    SP+  +  A K+L+      +           +  EG+E+
Sbjct: 210 FDKLILDVETKNSISPRDALASAGKTLVELFGLARE--------LNVEAEGIEI 255


>1BCC-A nrPDB
          Length = 446

 Score = 28.2 bits (61), Expect = 0.96,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 8/59 (13%)

Query: 58  AGYKVPHPLNHNFILRVQTVEDCSPKQVIVDAAKSLITHLEEIKVNFMREWELKMISVE 116
           AGY + H        R        P+  +    +S+  HL          + +K +S +
Sbjct: 55  AGYFLEHLAFKGTKNR--------PQNALEKEVESMGAHLNAYSSREHTAYYIKALSKD 105


>5XY3-e nrPDB
          Length = 132

 Score = 27.0 bits (58), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 17/45 (37%)

Query: 65  PLNHNFILRVQTVEDCSPKQVIVDAAKSLITHLEEIKVNFMREWE 109
           P  H  I+  +T     P+  + +   S   H   I   F R++ 
Sbjct: 4   PAEHKPIIHKKTNRFHRPQSDLWNRVPSAWRHPRGIDSRFRRKYR 48


>2O55-A nrPDB
          Length = 258

 Score = 26.6 bits (57), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 33/111 (29%), Gaps = 7/111 (6%)

Query: 4   PERYELIELMGLPKVTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAGYKVP 63
           P   EL   +   K   +L+ +         E  DH    +L  +    ERV +  +   
Sbjct: 93  PSLEELFVAIEEQKFNLKLNLELKGEEWKRKESGDHQRLLLLVEKYHMQERVDYCSFHHE 152

Query: 64  ---HPLNHNFILRV----QTVEDCSPKQVIVDAAKSLITHLEEIKVNFMRE 107
              H       +++      +   +P   +  A       +  +     +E
Sbjct: 153 ALAHLKALCPDVKITYLFNYMGQPTPLDFVEQACYGDANGVSMLFHYLTKE 203


>6DW1-E nrPDB
          Length = 384

 Score = 26.2 bits (56), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 25/58 (43%), Gaps = 6/58 (10%)

Query: 72  LRVQTVEDCSPKQVIVDAAKSLITHLEEIKVN------FMREWELKMISVEGVEMEFS 123
           +R++      P  V +    + I  + E+ ++      F + W+ K +S  G+ +  +
Sbjct: 50  IRLRPDFGGPPVDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLT 107


>3IFS-A nrPDB
          Length = 453

 Score = 25.8 bits (55), Expect = 4.4,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 34  LEKEDHTLANMLANQLLSDERVLFAGYKV 62
           +E  +H+  N L+ +     +VLF G  +
Sbjct: 96  IEMLNHSFYNTLSKEQRKTPQVLFVGQNI 124


>2PLE-A nrPDB
          Length = 105

 Score = 25.8 bits (55), Expect = 5.1,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 17/52 (32%), Gaps = 5/52 (9%)

Query: 30  AVVTLEKEDHTLANMLANQLLSDERVLFAGYKVPHPLNHNFILRVQTVEDCS 81
             V  E +   L N   + L     V    Y   HPL     LR    E+ S
Sbjct: 58  CRVQQEGQTVMLGNSEFDSL-----VDLISYYEKHPLYRKMKLRYPINEENS 104


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.311    0.130    0.327 

Lambda     K      H
   0.267   0.0393    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,893,005
Number of Sequences: 36641
Number of extensions: 112052
Number of successful extensions: 369
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 337
Number of HSP's gapped (non-prelim): 35
length of query: 123
length of database: 10,336,785
effective HSP length: 85
effective length of query: 38
effective length of database: 7,222,300
effective search space: 274447400
effective search space used: 274447400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 53 (25.1 bits)