BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P78794 (265 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3JB9-h nrPDB 536 e-153 5Z58-P nrPDB 52 2e-07 6J6Q-S nrPDB 43 1e-04 5LJ3-O nrPDB 28 4.2 2PWJ-A nrPDB 28 5.6 6AHD-0 nrPDB 27 7.1 5GMK-c nrPDB 27 7.2 3J3U-A nrPDB 27 7.3 3PXI-A nrPDB 27 9.1 >3JB9-h nrPDB Length = 265 Score = 536 bits (1381), Expect = e-153, Method: Compositional matrix adjust. Identities = 265/265 (100%), Positives = 265/265 (100%) Query: 1 MTTAHRPQFDPARGHSEMAPTRITSSRALPAHLKLKYRQESQGTEEEVRKQDLREALLRA 60 MTTAHRPQFDPARGHSEMAPTRITSSRALPAHLKLKYRQESQGTEEEVRKQDLREALLRA Sbjct: 1 MTTAHRPQFDPARGHSEMAPTRITSSRALPAHLKLKYRQESQGTEEEVRKQDLREALLRA 60 Query: 61 EAAHFATQEHGASSEEVSQNSKLIEGFTSPSTDDKPNNDVEVDYQELLRQTLEADEDASD 120 EAAHFATQEHGASSEEVSQNSKLIEGFTSPSTDDKPNNDVEVDYQELLRQTLEADEDASD Sbjct: 61 EAAHFATQEHGASSEEVSQNSKLIEGFTSPSTDDKPNNDVEVDYQELLRQTLEADEDASD 120 Query: 121 SDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQE 180 SDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQE Sbjct: 121 SDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQE 180 Query: 181 RKREQMLQEEKNRALEQEKREREIAFGNELLNKASSGSFQVKRRWDEDVVFRNTHKGVDD 240 RKREQMLQEEKNRALEQEKREREIAFGNELLNKASSGSFQVKRRWDEDVVFRNTHKGVDD Sbjct: 181 RKREQMLQEEKNRALEQEKREREIAFGNELLNKASSGSFQVKRRWDEDVVFRNTHKGVDD 240 Query: 241 TPRPGFVNDMLRSEFHKKFLARFVD 265 TPRPGFVNDMLRSEFHKKFLARFVD Sbjct: 241 TPRPGFVNDMLRSEFHKKFLARFVD 265 >5Z58-P nrPDB Length = 229 Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 6/59 (10%) Query: 1 MTTAHRPQFDPARGHSEMAPTRIT------SSRALPAHLKLKYRQESQGTEEEVRKQDL 53 MTTA RP F+PARG ++ SSR LP+H K+KYRQ +Q EEVR +D Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDF 59 >6J6Q-S nrPDB Length = 175 Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Query: 1 MTTAHRPQFDPARGHSEMA--PTRITSSRALPAHLKLKYRQ 39 MTT+HRPQ + G A PT I +R LP H LKYR+ Sbjct: 1 MTTSHRPQLEARSGAKAAAYTPTGIEHARLLPGHTTLKYRK 41 Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 35/128 (27%) Query: 146 QESVDSSNSESSDEESDSEDETQQLLRELENIKQERKREQMLQEEKNRALEQEKREREIA 205 Q+ V S N + + E D +D Q+LL + Q+ K E +K E E Sbjct: 73 QDVVGSGNLQETRSEKDQKDSLQELL-----VTQKNKVE-------------DKAELE-- 112 Query: 206 FGNELLNKASSGSFQVKRRWDEDVVFRNTHKGVDDT---------PRPGFVNDMLRSEFH 256 GNE L +S +R W + F HK +T G++NDM +SE+H Sbjct: 113 -GNEQLKGGNSS----RRSWRKGTAF-GRHKVTKETNIKEHATKKSASGYINDMTKSEYH 166 Query: 257 KKFLARFV 264 ++FL + V Sbjct: 167 QEFLHKHV 174 >5LJ3-O nrPDB Length = 590 Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 21/127 (16%) Query: 121 SDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQE 180 +D V N N+E + R N + DEE + E + L + K Sbjct: 121 TDLKVGDINPNAETQMAR------------PDNGDLEDEEKEMLAEARARLLNTQGKKAT 168 Query: 181 RK-REQMLQEEKNRALEQEKREREIAFGNELLNKASSGSFQVKRRWDEDVVFRNTHKGVD 239 RK RE+ML+E K A Q++RE + A N + K + ++ED+V+ + Sbjct: 169 RKIRERMLEESKRIAELQKRRELKQAGINVAIKKPKK-KYGTDIDYNEDIVY-------E 220 Query: 240 DTPRPGF 246 P PG Sbjct: 221 QAPMPGI 227 >2PWJ-A nrPDB Length = 171 Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust. Identities = 12/27 (44%), Positives = 18/27 (66%) Query: 203 EIAFGNELLNKASSGSFQVKRRWDEDV 229 ++A G ++L+ AS+ S Q R WDE V Sbjct: 2 KVATGTDILSAASNVSLQKARTWDEGV 28 >6AHD-0 nrPDB Length = 439 Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 6/56 (10%) Query: 171 LRELENIKQERKREQMLQEEKN-----RALEQEKREREI-AFGNELLNKASSGSFQ 220 +REL+ IK++R+ + L++EK R L +E+R E+ A G + NKA G ++ Sbjct: 281 VRELKRIKRDREDREALEKEKAEIERMRNLTEEERRAELRANGKVITNKAVKGKYK 336 >5GMK-c nrPDB Length = 587 Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 9/95 (9%) Query: 153 NSESSDEESDSEDETQQLLRELENIKQERK-REQMLQEEKNRALEQEKREREIAFGNELL 211 N + DEE + E + L + K RK RE+ML+E K A Q++RE + A N + Sbjct: 141 NGDLEDEEKEMLAEARARLLNTQGKKATRKIRERMLEESKRIAELQKRRELKQAGINVAI 200 Query: 212 NKASSGSFQVKRRWDEDVVFRNTHKGVDDTPRPGF 246 K + ++ED+V+ + P PG Sbjct: 201 KKPKK-KYGTDIDYNEDIVY-------EQAPMPGI 227 >3J3U-A nrPDB Length = 810 Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust. Identities = 29/116 (25%), Positives = 58/116 (50%), Gaps = 2/116 (1%) Query: 90 PSTDDKPNNDVEVDYQELLRQTLEADEDASDSDDSVDSSNKNSEVSIKRRKTESNSQESV 149 P D+P+ D + + LR EA S +DD+++++ K S+ I R + + + Sbjct: 336 PIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLI 395 Query: 150 DSSNSESSDEESDSEDETQQLLRELENIKQERKREQMLQE-EKNRAL-EQEKRERE 203 D + S+ + ++L ++L+ +++E+ QE EK +L + E+R RE Sbjct: 396 DEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLRE 451 >3PXI-A nrPDB Length = 758 Score = 26.9 bits (58), Expect = 9.1, Method: Compositional matrix adjust. Identities = 20/92 (21%), Positives = 46/92 (50%) Query: 90 PSTDDKPNNDVEVDYQELLRQTLEADEDASDSDDSVDSSNKNSEVSIKRRKTESNSQESV 149 P D+P+ D + + LR EA S +DD+++++ K S+ I R + + + Sbjct: 319 PIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLI 378 Query: 150 DSSNSESSDEESDSEDETQQLLRELENIKQER 181 D + S+ + ++L ++L+ +++E+ Sbjct: 379 DEAGSKVRLRSFTTPPNLKELEQKLDEVRKEK 410 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3JB9-h nrPDB 404 e-113 5Z58-P nrPDB 138 3e-33 6J6Q-S nrPDB 55 4e-08 Sequences not found previously or not previously below threshold: 3J3U-A nrPDB 41 6e-04 3PXI-A nrPDB 40 0.001 3PXG-A nrPDB 40 0.001 6EM8-A nrPDB 37 0.007 5VY8-A nrPDB 37 0.010 6GYL-Q nrPDB 35 0.039 4KV9-A nrPDB 34 0.089 5GMK-c nrPDB 34 0.096 5LJ3-O nrPDB 33 0.15 3JCM-G nrPDB 33 0.17 1CII-A nrPDB 32 0.19 1F5N-A nrPDB 32 0.23 4RM9-A nrPDB 32 0.23 6OJ5-A nrPDB 32 0.26 6FAI-l nrPDB 32 0.28 3WQT-A nrPDB 32 0.28 4U1T-A nrPDB 31 0.38 4B3F-X nrPDB 31 0.45 2PWJ-A nrPDB 31 0.51 5WLC-SS nrPDB 31 0.66 3JCR-F nrPDB 30 0.85 6AHD-0 nrPDB 30 0.92 5OQL-B nrPDB 29 1.5 6ID1-U nrPDB 29 2.7 6G18-v nrPDB 28 4.6 5OMB-C nrPDB 27 8.1 >3JB9-h nrPDB Length = 265 Score = 404 bits (1039), Expect = e-113, Method: Composition-based stats. Identities = 265/265 (100%), Positives = 265/265 (100%) Query: 1 MTTAHRPQFDPARGHSEMAPTRITSSRALPAHLKLKYRQESQGTEEEVRKQDLREALLRA 60 MTTAHRPQFDPARGHSEMAPTRITSSRALPAHLKLKYRQESQGTEEEVRKQDLREALLRA Sbjct: 1 MTTAHRPQFDPARGHSEMAPTRITSSRALPAHLKLKYRQESQGTEEEVRKQDLREALLRA 60 Query: 61 EAAHFATQEHGASSEEVSQNSKLIEGFTSPSTDDKPNNDVEVDYQELLRQTLEADEDASD 120 EAAHFATQEHGASSEEVSQNSKLIEGFTSPSTDDKPNNDVEVDYQELLRQTLEADEDASD Sbjct: 61 EAAHFATQEHGASSEEVSQNSKLIEGFTSPSTDDKPNNDVEVDYQELLRQTLEADEDASD 120 Query: 121 SDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQE 180 SDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQE Sbjct: 121 SDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQE 180 Query: 181 RKREQMLQEEKNRALEQEKREREIAFGNELLNKASSGSFQVKRRWDEDVVFRNTHKGVDD 240 RKREQMLQEEKNRALEQEKREREIAFGNELLNKASSGSFQVKRRWDEDVVFRNTHKGVDD Sbjct: 181 RKREQMLQEEKNRALEQEKREREIAFGNELLNKASSGSFQVKRRWDEDVVFRNTHKGVDD 240 Query: 241 TPRPGFVNDMLRSEFHKKFLARFVD 265 TPRPGFVNDMLRSEFHKKFLARFVD Sbjct: 241 TPRPGFVNDMLRSEFHKKFLARFVD 265 >5Z58-P nrPDB Length = 229 Score = 138 bits (346), Expect = 3e-33, Method: Composition-based stats. Identities = 99/275 (36%), Positives = 129/275 (46%), Gaps = 58/275 (21%) Query: 1 MTTAHRPQFDPARGHSEMAPTRIT------SSRALPAHLKLKYRQESQGTEEEVRKQDLR 54 MTTA RP F+PARG ++ SSR LP+H K+KYRQ +Q EEVR +D R Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDFR 60 Query: 55 EALLRAEAAHFATQEHGASSEEVSQNSKLIEGFTSPSTDDKPNNDVEVDYQELLRQTLEA 114 L E A + + E + TS S KP D Q A Sbjct: 61 RELEERERAAAREKNRDRPTREHT---------TSSSVSKKPRLD----------QIPAA 101 Query: 115 DEDASDSDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLREL 174 + DA D + + EE +D+T LL EL Sbjct: 102 NLDADDPL----------------------------TDEEDEDFEEESDDDDTAALLAEL 133 Query: 175 ENIKQERKREQMLQEEKNRALEQEKREREIAFGNELLN----KASSGSFQVKRRWDEDVV 230 E IK+ER EQ +E++ +A E+ R I GN LLN +F+VKRRWD+DVV Sbjct: 134 EKIKKERAEEQARKEQEQKAEEERIRMENILSGNPLLNLTGPSQPQANFKVKRRWDDDVV 193 Query: 231 FRNTHKGVDDTPRPG-FVNDMLRSEFHKKFLARFV 264 F+N KGVDD + FVND LRSEFHKKF+ +++ Sbjct: 194 FKNCAKGVDDQKKDKRFVNDTLRSEFHKKFMEKYI 228 >6J6Q-S nrPDB Length = 175 Score = 54.8 bits (130), Expect = 4e-08, Method: Composition-based stats. Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Query: 1 MTTAHRPQFDPARGHSEMA--PTRITSSRALPAHLKLKYRQ 39 MTT+HRPQ + G A PT I +R LP H LKYR+ Sbjct: 1 MTTSHRPQLEARSGAKAAAYTPTGIEHARLLPGHTTLKYRK 41 Score = 36.0 bits (81), Expect = 0.019, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 59/136 (43%), Gaps = 17/136 (12%) Query: 129 NKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQERKREQMLQ 188 +++++ S++ Q+ V S N + + E D +D Q+LL +N +++ + + Sbjct: 56 DRSNDKSLEEAVMNEEKQDVVGSGNLQETRSEKDQKDSLQELLVTQKNKVEDKAELEGNE 115 Query: 189 EEKNRALEQEKREREIAFGNELLNKASSGSFQVKRRWDEDVVFRNTHKGVDDTPRPGFVN 248 + K + + AFG + K + N + G++N Sbjct: 116 QLKGGNSSRRSWRKGTAFGRHKVTKET-----------------NIKEHATKKSASGYIN 158 Query: 249 DMLRSEFHKKFLARFV 264 DM +SE+H++FL + V Sbjct: 159 DMTKSEYHQEFLHKHV 174 >3J3U-A nrPDB Length = 810 Score = 41.0 bits (94), Expect = 6e-04, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 22/193 (11%) Query: 53 LREALLRAEAAHFATQEHGASSEEVSQNSKLIEGFTSPSTDDKPNNDVEVDYQELLRQTL 112 L+ +L R E + + +++ L F P D+P+ D + + LR Sbjct: 300 LKPSLARGELQCIGATTLDEYRKYIEKDAALERRF-QPIQVDQPSVDESIQILQGLRDRY 358 Query: 113 EADEDASDSDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLR 172 EA S +DD+++++ K S+ I R + + +D + S+ + ++L + Sbjct: 359 EAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQ 418 Query: 173 ELENIKQERKREQMLQE-EKNRAL-EQEKREREIAFGNELLNKASSGSFQV---KRRWDE 227 +L+ +++E+ QE EK +L + E+R RE QV K+ W E Sbjct: 419 KLDEVRKEKDAAVQSQEFEKAASLRDTEQRLRE----------------QVEDTKKSWKE 462 Query: 228 DVVFRNTHKGVDD 240 N+ VDD Sbjct: 463 KQGQENSEVTVDD 475 >3PXI-A nrPDB Length = 758 Score = 40.2 bits (92), Expect = 0.001, Method: Composition-based stats. Identities = 44/193 (22%), Positives = 82/193 (42%), Gaps = 22/193 (11%) Query: 53 LREALLRAEAAHFATQEHGASSEEVSQNSKLIEGFTSPSTDDKPNNDVEVDYQELLRQTL 112 L+ +L R E + + +++ L F P D+P+ D + + LR Sbjct: 283 LKPSLARGELQCIGATTLDEYRKYIEKDAALERRF-QPIQVDQPSVDESIQILQGLRDRY 341 Query: 113 EADEDASDSDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLR 172 EA S +DD+++++ K S+ I R + + +D + S+ + ++L + Sbjct: 342 EAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQ 401 Query: 173 ELENIKQERKREQMLQE-EKNRAL-EQEKREREIAFGNELLNKASSGSFQV---KRRWDE 227 +L+ +++E+ QE EK +L + E+R RE QV K+ W E Sbjct: 402 KLDEVRKEKDAAVQSQEFEKAASLRDTEQRLRE----------------QVEDTKKSWKE 445 Query: 228 DVVFRNTHKGVDD 240 N+ VDD Sbjct: 446 KQGQENSEVTVDD 458 >3PXG-A nrPDB Length = 468 Score = 39.8 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 80/190 (42%), Gaps = 16/190 (8%) Query: 53 LREALLRAEAAHFATQEHGASSEEVSQNSKLIEGFTSPSTDDKPNNDVEVDYQELLRQTL 112 L+ +L R E + + +++ L F P D+P+ D + + LR Sbjct: 283 LKPSLARGELQCIGATTLDEYRKYIEKDAALERRF-QPIQVDQPSVDESIQILQGLRDRY 341 Query: 113 EADEDASDSDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLR 172 EA S +DD+++++ K S+ I R + + +D + S+ + ++L + Sbjct: 342 EAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQ 401 Query: 173 ELENIKQERKREQMLQE-EKNRAL-EQEKREREIAFGNELLNKASSGSFQVKRRWDEDVV 230 +L+ +++E+ QE EK +L + E+R RE K+ W E Sbjct: 402 KLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQV-------------EDTKKSWKEKQG 448 Query: 231 FRNTHKGVDD 240 N+ VDD Sbjct: 449 QENSEVTVDD 458 >6EM8-A nrPDB Length = 818 Score = 37.1 bits (84), Expect = 0.007, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 69/150 (46%), Gaps = 1/150 (0%) Query: 53 LREALLRAEAAHFATQEHGASSEEVSQNSKLIEGFTSPSTDDKPNNDVEVDYQELLRQTL 112 L+ AL R E + + +++ L F P D+P+ V + LR Sbjct: 300 LKPALARGELQCIGATTLDEYRKNIEKDAALERRF-QPVQVDEPSVVDTVAILKGLRDRY 358 Query: 113 EADEDASDSDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLR 172 EA + SD++++++ K S + R + + +D ++S+ + + + +++ + Sbjct: 359 EAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAIDLIDEASSKVRLKSHTTPNNLKEIEQ 418 Query: 173 ELENIKQERKREQMLQEEKNRALEQEKRER 202 E+E +K E+ QE +N A ++K+ + Sbjct: 419 EIEKVKNEKDAAVHAQEFENAANLRDKQTK 448 >5VY8-A nrPDB Length = 908 Score = 36.7 bits (83), Expect = 0.010, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 19/108 (17%) Query: 93 DDKPNNDVEVDYQELLRQTLEADEDASDSDDSVDSSNKNSEVSIKRRKTESNSQESVDSS 152 D KP E+D +E Q ++ + A + D+ DS+ K+ + + R+K E++ QE ++ Sbjct: 408 DSKPE---ELDSKERQLQLIQVEIKALERDEDADSTTKD-RLKLARQK-EASLQEELEPL 462 Query: 153 NSESSDEESDSEDETQQLLRELENIKQERKREQMLQEEKNRALEQEKR 200 ++E+ E+ TQ ++ L E +N+AL+ E+R Sbjct: 463 RQRYNEEKHGHEELTQA--------------KKKLDELENKALDAERR 496 >6GYL-Q nrPDB Length = 735 Score = 34.8 bits (78), Expect = 0.039, Method: Composition-based stats. Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 13/103 (12%) Query: 93 DDKPNNDVEVDYQELLRQTLEADEDASDSDDSVDSSNKNSEVSIKRRKTESNSQESVDSS 152 D N++VE+DY E AD++ + D + NK SE IK+ ++N+ Sbjct: 458 DRDDNSEVELDYDEEF-----ADDEEAPIIDGNEQENKESEQRIKKEMLQANAMGL---- 508 Query: 153 NSESSDEESDSEDETQQLLRELENIKQERKREQMLQEEKNRAL 195 DEE+ SE+E +L E + + + ++ LQ+ + AL Sbjct: 509 ----RDEEAPSENEEDELFGEKKIDEDGERIKKALQKTELAAL 547 >4KV9-A nrPDB Length = 412 Score = 33.6 bits (75), Expect = 0.089, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 59/142 (41%), Gaps = 23/142 (16%) Query: 72 ASSEEVSQNSKLIEGFTSPSTDDKPNNDVEVDYQELLRQTLEAD-EDASDSDDSVDSSNK 130 SSEEV N K + P + N+ D+ L L + ED + V Sbjct: 238 GSSEEVKINGKTVRVRQYPWGSVQVENENHCDFVRLREMLLRVNMEDLRERTHGV----- 292 Query: 131 NSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQERKREQMLQ-- 188 + E ++R E + D+E S ET + REL+ + ++K E+M Q Sbjct: 293 HYETYRRQRLIEMGFR-----------DDEKMSLQETYEKRRELQRKELQQKEEEMRQMF 341 Query: 189 ----EEKNRALEQEKREREIAF 206 +EK + L++ +RE + F Sbjct: 342 VQRVKEKEQVLKEAERELQTKF 363 >5GMK-c nrPDB Length = 587 Score = 33.6 bits (75), Expect = 0.096, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 10/146 (6%) Query: 120 DSDDSVDSSNKNSEVSIKRRKTESNSQ-ESVDSSNSESSDEESDSEDETQQLLRELENIK 178 +S+DS ++ +K N++ + N + DEE + E + L + K Sbjct: 107 ESEDSGGAALSTGVTDLKAGDINPNAETQMARPDNGDLEDEEKEMLAEARARLLNTQGKK 166 Query: 179 QERK-REQMLQEEKNRALEQEKREREIAFGNELLNKASSGSFQVKRRWDEDVVFRNTHKG 237 RK RE+ML+E K R E +KR G + K + ++ED+V+ Sbjct: 167 ATRKIRERMLEESK-RIAELQKRRELKQAGINVAIKKPKKKYGTDIDYNEDIVY------ 219 Query: 238 VDDTPRPGFVNDMLRSEFHKKFLARF 263 + P PG + KK +F Sbjct: 220 -EQAPMPGIYDTSTEDRQIKKKFEQF 244 >5LJ3-O nrPDB Length = 590 Score = 32.9 bits (73), Expect = 0.15, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 55/144 (38%), Gaps = 21/144 (14%) Query: 121 SDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQE 180 +D V N N+E + R N + DEE + E + L + K Sbjct: 121 TDLKVGDINPNAETQMAR------------PDNGDLEDEEKEMLAEARARLLNTQGKKAT 168 Query: 181 RK-REQMLQEEKNRALEQEKREREIAFGNELLNKASSGSFQVKRRWDEDVVFRNTHKGVD 239 RK RE+ML+E K R E +KR G + K + ++ED+V+ + Sbjct: 169 RKIRERMLEESK-RIAELQKRRELKQAGINVAIKKPKKKYGTDIDYNEDIVY-------E 220 Query: 240 DTPRPGFVNDMLRSEFHKKFLARF 263 P PG + KK +F Sbjct: 221 QAPMPGIYDTSTEDRQIKKKFEQF 244 >3JCM-G nrPDB Length = 899 Score = 32.9 bits (73), Expect = 0.17, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 10/111 (9%) Query: 91 STDDKPNNDVEVDYQELLRQTLEADEDASDSDDSVDSSNKNSEVSI----KRRKTESNSQ 146 S DDK + Y+E L L++ + D DD + K E+ + K+R E + Sbjct: 35 SNDDK-GRRIPKRYRENLNNHLQS-QPKDDEDDEAANVFKTLELKLAQKKKKRANEKDDD 92 Query: 147 ESVDSSN--SESSDEESDSEDETQQLLRELENIKQ--ERKREQMLQEEKNR 193 SVDSSN + +D + T+ ++ + R + +QE+ NR Sbjct: 93 NSVDSSNVKRQFADLKESLAAVTESEWMDIPDATDFTRRNKRNRIQEQLNR 143 >1CII-A nrPDB Length = 602 Score = 32.5 bits (72), Expect = 0.19, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 56/117 (47%), Gaps = 6/117 (5%) Query: 103 DYQELLRQTLEADEDASDSDDSVDSSNKNSEVSIKRRKTESNSQESVDSSN---SESSDE 159 D ++ + +E D+ +++ V +K + + R ++++ +V+S+ S ++E Sbjct: 328 DRNPVVTEDVEGDKKIYNAE--VAEWDKLRQRLLDARNKITSAESAVNSARNNLSARTNE 385 Query: 160 ESDSEDETQQLLRELENIKQERKR-EQMLQEEKNRALEQEKREREIAFGNELLNKAS 215 + + D LL+E ENI+ + Q + EEK + E + + I F E L S Sbjct: 386 QKHANDALNALLKEKENIRNQLSGINQKIAEEKRKQDELKATKDAINFTTEFLKSVS 442 >1F5N-A nrPDB Length = 592 Score = 32.1 bits (71), Expect = 0.23, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 56/125 (44%), Gaps = 11/125 (8%) Query: 102 VDYQELLRQTLEADEDASDSDDSVDSS--NKNSEVSIKRRKTESNSQESVDSSNSESSDE 159 + +E+L+ L++ E +D+ D + K E+ ++R K ES S+ Sbjct: 455 IQAEEILQTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQA---------SAKM 505 Query: 160 ESDSEDETQQLLRELENIKQERKREQMLQEEKNRALEQEKREREIAFGNELLNKASSGSF 219 + + + +Q++ + E QE ++ + E +R +++ER +A + + F Sbjct: 506 LHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGF 565 Query: 220 QVKRR 224 Q + R Sbjct: 566 QKESR 570 >4RM9-A nrPDB Length = 587 Score = 32.1 bits (71), Expect = 0.23, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 133 EVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQERKREQMLQEEKN 192 E KRR+T +E + E D E++T++ REL ++ +R L+EE+ Sbjct: 325 ETEKKRRETVEREKEQMMREKEELMLRLQDYEEKTKKAERELS---EQIQRALQLEEERK 381 Query: 193 RALEQEKR 200 RA E+ +R Sbjct: 382 RAQEEAER 389 Score = 29.0 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 9/104 (8%) Query: 136 IKRRKTESNSQESVDSSNSESSDEESDS-EDETQQLLRELENI--------KQERKREQM 186 +K + E Q+ ++ E+ + ++ E E +Q++RE E + ++ +K E+ Sbjct: 306 MKAQAREEKHQKQLERQQLETEKKRRETVEREKEQMMREKEELMLRLQDYEEKTKKAERE 365 Query: 187 LQEEKNRALEQEKREREIAFGNELLNKASSGSFQVKRRWDEDVV 230 L E+ RAL+ E+ + E L + + K + V Sbjct: 366 LSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAV 409 >6OJ5-A nrPDB Length = 887 Score = 32.1 bits (71), Expect = 0.26, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 5/87 (5%) Query: 108 LRQTLEADEDASDSDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSE--SSDEESDSED 165 L+Q E + + + +S NKN+ K S +E + + E +DE S Sbjct: 14 LKQDDRMQEKEENKNVNTNSENKNATKPQLSEKVLSQKEEVITDNQEEIKIADEVKKSNK 73 Query: 166 ETQQLLRELENIKQERKRE---QMLQE 189 E + L E+ K+E ++E ++LQ+ Sbjct: 74 EESKQLLEVLKTKEEHQKEVQYEILQK 100 >6FAI-l nrPDB Length = 425 Score = 32.1 bits (71), Expect = 0.28, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 2/96 (2%) Query: 103 DYQELLRQTLEADEDASDSDDSVD-SSNKNSEVSIKR-RKTESNSQESVDSSNSESSDEE 160 D++ +++T DE S S ++ E +++ R NS + + + +E + E Sbjct: 310 DFKRDVKRTDNLDELVQASGFSKKHPGDRGLETAVESMRNAVYNSDDDMSNDEAEEENGE 369 Query: 161 SDSEDETQQLLRELENIKQERKREQMLQEEKNRALE 196 D +E + EL+N E E +EE R +E Sbjct: 370 GDYSEEDEYYDSELDNESSEDDSEDAQEEENERIIE 405 >3WQT-A nrPDB Length = 484 Score = 32.1 bits (71), Expect = 0.28, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 5/78 (6%) Query: 113 EADEDASDSDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEE-SDSEDETQQLL 171 E +ED D D + S KR+ + ++ E + ESSDEE SED Q+ Sbjct: 404 ETEEDVIDVKDKDNESKLGGFDWFKRKTNKKDTHE----NEVESSDEEIYQSEDNHQEHK 459 Query: 172 RELENIKQERKREQMLQE 189 + E+++ + K E ++ Sbjct: 460 QNHEHVQDKDKEESKFKK 477 >4U1T-A nrPDB Length = 389 Score = 31.3 bits (69), Expect = 0.38, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 35/94 (37%), Gaps = 7/94 (7%) Query: 8 QFDPARGHSEMAPTRITSSRALPAHLKLKYRQESQGTE-------EEVRKQDLREALLRA 60 +FD H P+ T P H+ Y + +Q E +++L E L Sbjct: 5 RFDTRLVHGGRRPSAGTGDVVPPIHVSTTYERRAQDEPRYFYGRGENPTREELEECLAGL 64 Query: 61 EAAHFATQEHGASSEEVSQNSKLIEGFTSPSTDD 94 E A FAT + + S + G STDD Sbjct: 65 ERAPFATVFSSGQAAAATLLSLVRPGQCVVSTDD 98 >4B3F-X nrPDB Length = 646 Score = 31.3 bits (69), Expect = 0.45, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%) Query: 139 RKTESNSQESVDS--SNSESSDEESDSEDETQQLLRELENIKQERKREQMLQEEKNRALE 196 R ES Q S+D+ + S+S+ +D + Q+ ++N K + KRE+ + + L Sbjct: 268 RLLESIQQHSLDAVLARSDSAQIVADIRKDIDQVF--VKNKKTQDKREKSNFRNEIKLLR 325 Query: 197 QEKREREIAFGNELLNKAS 215 +E +ERE A E L A+ Sbjct: 326 KELKEREEAAMLESLTSAN 344 >2PWJ-A nrPDB Length = 171 Score = 30.9 bits (68), Expect = 0.51, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 23/38 (60%) Query: 203 EIAFGNELLNKASSGSFQVKRRWDEDVVFRNTHKGVDD 240 ++A G ++L+ AS+ S Q R WDE V + + V+D Sbjct: 2 KVATGTDILSAASNVSLQKARTWDEGVESKFSTTPVND 39 >5WLC-SS nrPDB Length = 898 Score = 30.6 bits (67), Expect = 0.66, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Query: 91 STDDKPNNDVEVDYQELLRQTLEADEDASDSDDSVDSSNKNSEVSIKRRKTESNSQESVD 150 S D +++ ++D + + L +DE A SDD D N +I+ +K +N QE D Sbjct: 56 SKGDTNSDEDDIDSESFEDEELNSDE-ALGSDDDYDILNSKFSQTIRDKKENANYQEEED 114 Query: 151 SSNSESSDEE 160 S DEE Sbjct: 115 EGGYTSIDEE 124 Score = 27.1 bits (58), Expect = 7.5, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 11/102 (10%) Query: 102 VDYQELLRQTLEADEDASDSDDSVDSSNKNSEVS--IKRRKTESNSQESVDSSNSES--- 156 +D +L + + + D S +D + +N V +KR K ++NS E D +SES Sbjct: 17 LDALQLAEREINGEFDNSSDNDKRHDARRNGTVVNLLKRSKGDTNSDE--DDIDSESFED 74 Query: 157 ----SDEESDSEDETQQLLRELENIKQERKREQMLQEEKNRA 194 SDE S+D+ L + +++K QEE++ Sbjct: 75 EELNSDEALGSDDDYDILNSKFSQTIRDKKENANYQEEEDEG 116 >3JCR-F nrPDB Length = 820 Score = 30.2 bits (66), Expect = 0.85, Method: Composition-based stats. Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 23/116 (19%) Query: 109 RQTLEADEDASDSDDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQ 168 R + D D D K S +S R K + S++ DS E DE D + + Q Sbjct: 83 RDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGK-DFKSRKDRDSKKDEE-DEHGDKKPKAQ 140 Query: 169 QL---------------------LRELENIKQERKREQMLQEEKNRALEQEKRERE 203 L L + E + KR Q EE+ R LE+E+++R+ Sbjct: 141 PLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRK 196 >6AHD-0 nrPDB Length = 439 Score = 30.2 bits (66), Expect = 0.92, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 6/61 (9%) Query: 171 LRELENIKQERKREQMLQEEKN-----RALEQEKREREI-AFGNELLNKASSGSFQVKRR 224 +REL+ IK++R+ + L++EK R L +E+R E+ A G + NKA G ++ ++ Sbjct: 281 VRELKRIKRDREDREALEKEKAEIERMRNLTEEERRAELRANGKVITNKAVKGKYKFLQK 340 Query: 225 W 225 + Sbjct: 341 Y 341 >5OQL-B nrPDB Length = 907 Score = 29.4 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 8/100 (8%) Query: 91 STDDKPNND----VEVDYQELLRQTL----EADEDASDSDDSVDSSNKNSEVSIKRRKTE 142 S DD P+ D + + L RQ L E ED + + + + E I + K Sbjct: 181 SEDDLPSGDESDTTRAERRALKRQRLAEAMEGLEDEAGQPERKKTRKEIYEEIIAKSKMY 240 Query: 143 SNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQERK 182 ++++ N+E E E QQLL +++ + E+K Sbjct: 241 KAERQAIKEENNELRMEVDQELPEVQQLLYQIKKPETEKK 280 >6ID1-U nrPDB Length = 894 Score = 28.6 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 15/78 (19%) Query: 142 ESNSQESVDSSNSESSDEESDSEDETQQLLRE--------------LENIKQERKREQML 187 E+ ++ D + +E +D+TQ + R+ ++K E++ + + Sbjct: 121 EAVPSQTPDKEKAWKVKDEKSGKDDTQIIKRDEWMTVDFMSVKTVSSSSLKAEKETMRKI 180 Query: 188 QEEKNRALEQEK-REREI 204 ++EKN+ALEQ K ERE+ Sbjct: 181 EQEKNQALEQSKLMEREL 198 >6G18-v nrPDB Length = 552 Score = 27.9 bits (60), Expect = 4.6, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 23/55 (41%) Query: 139 RKTESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQERKREQMLQEEKNR 193 R + Q DS + ES+D S E Q L E++ E EEKNR Sbjct: 368 RSSGDPEQIKEDSLSEESADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEKNR 422 >5OMB-C nrPDB Length = 111 Score = 27.1 bits (58), Expect = 8.1, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 5/63 (7%) Query: 133 EVSIKRRKT---ESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQERKREQMLQE 189 EV + R+K E +E D+ S +S E+E +L ELE ++ ERK ML E Sbjct: 48 EVGVLRQKLSMLEKTLREHDDNQKKLESSLKSSHEEEVTKLKIELERLEDERKF--MLLE 105 Query: 190 EKN 192 +K+ Sbjct: 106 QKH 108 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.301 0.121 0.312 Lambda K H 0.267 0.0387 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,065,616 Number of Sequences: 36641 Number of extensions: 332112 Number of successful extensions: 1935 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 160 Number of HSP's that attempted gapping in prelim test: 1284 Number of HSP's gapped (non-prelim): 543 length of query: 265 length of database: 10,336,785 effective HSP length: 95 effective length of query: 170 effective length of database: 6,855,890 effective search space: 1165501300 effective search space used: 1165501300 T: 11 A: 40 X1: 16 ( 6.9 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.7 bits) S2: 58 (27.0 bits)