BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P78356 (416 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3X07-A nrPDB 803 0.0 2YBX-A nrPDB 571 e-163 2GK9-A nrPDB 511 e-145 6CMW-A nrPDB 165 3e-41 1OHW-A nrPDB 33 0.33 2NBR-A nrPDB 31 1.1 2L3W-A nrPDB 31 1.1 3R31-A nrPDB 30 1.4 2JJ9-A nrPDB 29 3.4 4IL2-A nrPDB 29 4.1 6CDD-A nrPDB 28 7.2 6CHS-A nrPDB 28 8.0 >3X07-A nrPDB Length = 393 Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/386 (99%), Positives = 385/386 (99%) Query: 31 QKVKLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLP 90 QKVKLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLP Sbjct: 8 QKVKLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLP 67 Query: 91 SRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIK 150 SRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIK Sbjct: 68 SRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIK 127 Query: 151 TVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTRNVFSHRLT 210 TVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTR VFSHRLT Sbjct: 128 TVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTRAVFSHRLT 187 Query: 211 VHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEF 270 VHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEF Sbjct: 188 VHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEF 247 Query: 271 LAQLKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGGNLLCSYGTPPDSPGNL 330 LAQLKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGGNLLCSYGTPPDSPGNL Sbjct: 248 LAQLKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGGNLLCSYGTPPDSPGNL 307 Query: 331 LSFPRFFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTVKHG 390 LSFPRFFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTVKHG Sbjct: 308 LSFPRFFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTVKHG 367 Query: 391 AGAEISTVNPEQYSKRFNEFMSNILT 416 AGAEISTVNPEQYSKRFNEFMSNILT Sbjct: 368 AGAEISTVNPEQYSKRFNEFMSNILT 393 >2YBX-A nrPDB Length = 394 Score = 571 bits (1471), Expect = e-163, Method: Compositional matrix adjust. Identities = 293/380 (77%), Positives = 338/380 (88%), Gaps = 5/380 (1%) Query: 36 FRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKF 95 F++ +P+LSVLMWGVNH+INELS+V +PVMLMPDDFKAYSKIKVDNHLFNKEN+PS FKF Sbjct: 20 FQSMDPLLSVLMWGVNHSINELSHVQIPVMLMPDDFKAYSKIKVDNHLFNKENMPSHFKF 79 Query: 96 KEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSE 155 KEYCPMVFRNLRERFGIDDQD+QNS+TRSAP+ +DSQ R G RF T+YD+R++IKT++SE Sbjct: 80 KEYCPMVFRNLRERFGIDDQDFQNSLTRSAPLPNDSQARSGARFHTSYDKRYIIKTITSE 139 Query: 156 DVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTRNVFSHRLTVHRKY 215 DVAEMHNILKKYHQ+IVECHG TLLPQFLGMYRL VDGVE Y++VTRNVFSHRL+V+RKY Sbjct: 140 DVAEMHNILKKYHQYIVECHGITLLPQFLGMYRLNVDGVEIYVIVTRNVFSHRLSVYRKY 199 Query: 216 DLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLK 275 DLKGSTVAREASDKEKAK+LPT KDNDF+NEGQK+++ + +KK FLEKLK+DVEFLAQLK Sbjct: 200 DLKGSTVAREASDKEKAKELPTLKDNDFINEGQKIYIDDNNKKVFLEKLKKDVEFLAQLK 259 Query: 276 IMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGGNLLCSYGTPPDSPGNLLSFPR 335 +MDYSLLVGIHDV+RAEQEE+E EE +EE E+DG GTPPDSPGN L+ Sbjct: 260 LMDYSLLVGIHDVERAEQEEVECEENDGEEEGESDGTH-----PVGTPPDSPGNTLNSSP 314 Query: 336 FFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTVKHGAGAEI 395 PGEFDP++DVY +K HE+SP+KEVYFMAIIDILT YD KKKAAHAAKTVKHGAGAEI Sbjct: 315 PLAPGEFDPNIDVYGIKCHENSPRKEVYFMAIIDILTHYDAKKKAAHAAKTVKHGAGAEI 374 Query: 396 STVNPEQYSKRFNEFMSNIL 415 STVNPEQYSKRF +F+ +IL Sbjct: 375 STVNPEQYSKRFLDFIGHIL 394 >2GK9-A nrPDB Length = 392 Score = 511 bits (1315), Expect = e-145, Method: Compositional matrix adjust. Identities = 261/393 (66%), Positives = 318/393 (80%), Gaps = 6/393 (1%) Query: 27 HFVCQKVKLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNK 86 HFV QKVK+FRA++P++ V +WGV H+INELS VP PVML+PDDFKA SKIKV+NHLF++ Sbjct: 3 HFVQQKVKVFRAADPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHR 62 Query: 87 ENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRR 146 ENLPS FKFKEYCP VFRNLR+RFGIDDQDY S+TR+ P S+S+G G RFL +YDR Sbjct: 63 ENLPSHFKFKEYCPQVFRNLRDRFGIDDQDYLVSLTRNPP--SESEGSDG-RFLISYDRT 119 Query: 147 FVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTRNVFS 206 VIK VSSED+A+MH+ L YHQ+IV+CHGNTLLPQFLGMYR++VD ++YM+V RN+FS Sbjct: 120 LVIKEVSSEDIADMHSNLSNYHQYIVKCHGNTLLPQFLGMYRVSVDNEDSYMLVMRNMFS 179 Query: 207 HRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKR 266 HRL VHRKYDLKGS V+REASDKEK K+LPT +D DFLN+ QK+++GEE KK FLEKLKR Sbjct: 180 HRLPVHRKYDLKGSLVSREASDKEKVKELPTLRDMDFLNKNQKVYIGEEEKKIFLEKLKR 239 Query: 267 DVEFLAQLKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECEND-GVGG--NLLCSYGTP 323 DVEFL QLKIMDYSLL+GIHD+ R + E E R ++ E + D + G L+ SYGT Sbjct: 240 DVEFLVQLKIMDYSLLLGIHDIIRGSEPEEEAPVREDESEVDGDCSLTGPPALVGSYGTS 299 Query: 324 PDSPGNLLSFPRFFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHA 383 P+ G + R GPGEF+ +DVYA++S E +P+KEVYFM +IDILT YD KKKAAHA Sbjct: 300 PEGIGGYIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLIDILTQYDAKKKAAHA 359 Query: 384 AKTVKHGAGAEISTVNPEQYSKRFNEFMSNILT 416 AKTVKHGAGAEISTV+PEQY+KRF +F++NI Sbjct: 360 AKTVKHGAGAEISTVHPEQYAKRFLDFITNIFA 392 >6CMW-A nrPDB Length = 394 Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 119/382 (31%), Positives = 181/382 (47%), Gaps = 22/382 (5%) Query: 39 SEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSR----FK 94 S + + G+ H++ LS P +LM DF+ I + + P FK Sbjct: 14 SSALKGAIQLGITHSVGSLSQKPERDVLM-QDFEVVESIFFPSQ--GSSSTPGHHHGDFK 70 Query: 95 FKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSS 154 FK Y P+ FR RE FGI DY S+ I + G G+ F + D F+IKTV Sbjct: 71 FKTYAPIAFRYFREMFGIRPDDYLYSLCNEPLIELSNPGASGSLFYVSSDDEFIIKTVQH 130 Query: 155 EDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTRNVFSHRLTVHRK 214 ++ + +L Y + + + TLLP+F G+Y + DG +VV N+ + +H K Sbjct: 131 KEAEFLQTLLPGYFMNLNQ-NMRTLLPKFYGLYCVQADGKNIRIVVMNNLLPRAVPMHLK 189 Query: 215 YDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEK-LKRDVEFLAQ 273 +DLKGST R AS KE++K +PT+KD DF+ + + + E L + ++RD L Sbjct: 190 FDLKGSTYKRRASPKERSKGVPTYKDLDFMQDMPEGILLENDHYTALSRTMQRDCRVLQS 249 Query: 274 LKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGGNLLCSYGTPPDSPGNLLSF 333 KIMDYSLLVGIH + RA +E D + + G L C+ + Sbjct: 250 FKIMDYSLLVGIHILHRAGEE---ASTAVPDTQKKGQG-QKPLYCTAIESIQGESKSKTS 305 Query: 334 PRFFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTVKHGAGA 393 P+ P + + + S ++ + F+ IIDIL Y KK H+ K + H G Sbjct: 306 PQ--------PYESMGGIPAFNSKGERLLVFIGIIDILQSYRLVKKLEHSWKALLHD-GD 356 Query: 394 EISTVNPEQYSKRFNEFMSNIL 415 +S P Y+ RF +FM + + Sbjct: 357 TVSVHRPSFYADRFQKFMCSTV 378 >1OHW-A nrPDB Length = 472 Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust. Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 6/72 (8%) Query: 325 DSPGNLLSFPR------FFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKK 378 D P ++++F + FF EF P+ + P K + +I+I+ D Sbjct: 319 DDPADVMTFSKKMMTGGFFHKEEFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLS 378 Query: 379 KAAHAAKTVKHG 390 AAHA K + G Sbjct: 379 NAAHAGKVLLTG 390 >2NBR-A nrPDB Length = 173 Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 12/73 (16%) Query: 182 QFLGMYRLTVDGVETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKDN 241 Q++G+ D + + ++ + V SHRL ++ + D KG + E ++D P+ +D Sbjct: 67 QWMGL----SDSIRSCCLIPQTV-SHRLRLYEREDHKGLMM-------ELSEDCPSIQDR 114 Query: 242 DFLNEGQKLHVGE 254 L+E + LHV E Sbjct: 115 FHLSEIRSLHVLE 127 >2L3W-A nrPDB Length = 143 Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust. Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Query: 372 TPYDTKKKAAHAAKTVKHGAGAEI-STVNPEQYSKRFNE 409 PYD + AAHAA HG A+I S ++ +Y++ F + Sbjct: 89 APYDQAEVAAHAATYHSHGYDADINSYIDSAEYTESFGD 127 >3R31-A nrPDB Length = 517 Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 9/92 (9%) Query: 238 FKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEE-M 296 + + G ++ V +++K FLE LKR E + +DY+ +G V +A+QE+ + Sbjct: 286 YSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPL-VSKAQQEKVL 344 Query: 297 EVEERAEDEECENDGVGGNLLCSYGTPPDSPG 328 E+ + E G L+ G P + G Sbjct: 345 SYIEKGKAE-------GATLITGGGIPNNVAG 369 >2JJ9-A nrPDB Length = 788 Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 16/116 (13%) Query: 128 NSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVEC--HGNTLLPQFLG 185 N S+ + G F+T + E +A + L+ + V C N LP L Sbjct: 627 NIASRAKKGANFIT-------VAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLE 679 Query: 186 ----MYRLTVDGVETYMVVTRNVFSHRLTVH---RKYDLKGSTVAREASDKEKAKD 234 + +L +GV + +TR F +R+ ++Y L V R+A D +KA D Sbjct: 680 DKVVLDQLRCNGVLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATD 735 >4IL2-A nrPDB Length = 426 Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust. Identities = 14/51 (27%), Positives = 26/51 (50%) Query: 84 FNKENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGR 134 + +E L S K+ ++ P +F +R +FG D+ + R PI + G+ Sbjct: 199 WPEEQLWSTEKYLDFMPKLFDAVRNKFGFDEHLLHDMHHRLTPIEAARFGK 249 >6CDD-A nrPDB Length = 474 Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 236 PTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEE 295 P F DN F E ++ +VGE + + + K + E A + + D+ LL IH + +EE Sbjct: 375 PLFTDNIFPIENRE-YVGEAQEVSAVAKALKVHEADAPMNVSDFHLLCFIHQMSVLSKEE 433 >6CHS-A nrPDB Length = 659 Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%) Query: 236 PTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEE 295 P F DN F E ++ +VGE + + + K + E A + + D+ LL IH + +EE Sbjct: 503 PLFTDNIFPIENRE-YVGEAQEVSAVAKALKVHEADAPMNVSDFHLLCFIHQMSVLSKEE 561 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3X07-A nrPDB 657 0.0 2GK9-A nrPDB 577 e-165 2YBX-A nrPDB 563 e-161 6CMW-A nrPDB 491 e-139 Sequences not found previously or not previously below threshold: 1OHW-A nrPDB 34 0.12 4HZI-A nrPDB 32 0.70 2YL9-A nrPDB 30 1.6 1M7B-A nrPDB 29 2.9 1GWN-A nrPDB 29 3.0 2EKC-A nrPDB 29 4.3 6CDD-A nrPDB 29 4.4 6CHS-A nrPDB 29 5.1 3RM5-A nrPDB 29 5.8 3LDA-A nrPDB 28 6.9 1SZP-A nrPDB 28 6.9 CONVERGED! >3X07-A nrPDB Length = 393 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 385/386 (99%), Positives = 385/386 (99%) Query: 31 QKVKLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLP 90 QKVKLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLP Sbjct: 8 QKVKLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLP 67 Query: 91 SRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIK 150 SRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIK Sbjct: 68 SRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIK 127 Query: 151 TVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTRNVFSHRLT 210 TVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTR VFSHRLT Sbjct: 128 TVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTRAVFSHRLT 187 Query: 211 VHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEF 270 VHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEF Sbjct: 188 VHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEF 247 Query: 271 LAQLKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGGNLLCSYGTPPDSPGNL 330 LAQLKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGGNLLCSYGTPPDSPGNL Sbjct: 248 LAQLKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGGNLLCSYGTPPDSPGNL 307 Query: 331 LSFPRFFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTVKHG 390 LSFPRFFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTVKHG Sbjct: 308 LSFPRFFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTVKHG 367 Query: 391 AGAEISTVNPEQYSKRFNEFMSNILT 416 AGAEISTVNPEQYSKRFNEFMSNILT Sbjct: 368 AGAEISTVNPEQYSKRFNEFMSNILT 393 >2GK9-A nrPDB Length = 392 Score = 577 bits (1488), Expect = e-165, Method: Composition-based stats. Identities = 261/393 (66%), Positives = 318/393 (80%), Gaps = 6/393 (1%) Query: 27 HFVCQKVKLFRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNK 86 HFV QKVK+FRA++P++ V +WGV H+INELS VP PVML+PDDFKA SKIKV+NHLF++ Sbjct: 3 HFVQQKVKVFRAADPLVGVFLWGVAHSINELSQVPPPVMLLPDDFKASSKIKVNNHLFHR 62 Query: 87 ENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRR 146 ENLPS FKFKEYCP VFRNLR+RFGIDDQDY S+TR+ P S+S+G G RFL +YDR Sbjct: 63 ENLPSHFKFKEYCPQVFRNLRDRFGIDDQDYLVSLTRNPP--SESEGSDG-RFLISYDRT 119 Query: 147 FVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTRNVFS 206 VIK VSSED+A+MH+ L YHQ+IV+CHGNTLLPQFLGMYR++VD ++YM+V RN+FS Sbjct: 120 LVIKEVSSEDIADMHSNLSNYHQYIVKCHGNTLLPQFLGMYRVSVDNEDSYMLVMRNMFS 179 Query: 207 HRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKR 266 HRL VHRKYDLKGS V+REASDKEK K+LPT +D DFLN+ QK+++GEE KK FLEKLKR Sbjct: 180 HRLPVHRKYDLKGSLVSREASDKEKVKELPTLRDMDFLNKNQKVYIGEEEKKIFLEKLKR 239 Query: 267 DVEFLAQLKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECEND-GVGGN--LLCSYGTP 323 DVEFL QLKIMDYSLL+GIHD+ R + E E R ++ E + D + G L+ SYGT Sbjct: 240 DVEFLVQLKIMDYSLLLGIHDIIRGSEPEEEAPVREDESEVDGDCSLTGPPALVGSYGTS 299 Query: 324 PDSPGNLLSFPRFFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHA 383 P+ G + R GPGEF+ +DVYA++S E +P+KEVYFM +IDILT YD KKKAAHA Sbjct: 300 PEGIGGYIHSHRPLGPGEFESFIDVYAIRSAEGAPQKEVYFMGLIDILTQYDAKKKAAHA 359 Query: 384 AKTVKHGAGAEISTVNPEQYSKRFNEFMSNILT 416 AKTVKHGAGAEISTV+PEQY+KRF +F++NI Sbjct: 360 AKTVKHGAGAEISTVHPEQYAKRFLDFITNIFA 392 >2YBX-A nrPDB Length = 394 Score = 563 bits (1451), Expect = e-161, Method: Composition-based stats. Identities = 293/380 (77%), Positives = 338/380 (88%), Gaps = 5/380 (1%) Query: 36 FRASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSRFKF 95 F++ +P+LSVLMWGVNH+INELS+V +PVMLMPDDFKAYSKIKVDNHLFNKEN+PS FKF Sbjct: 20 FQSMDPLLSVLMWGVNHSINELSHVQIPVMLMPDDFKAYSKIKVDNHLFNKENMPSHFKF 79 Query: 96 KEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSE 155 KEYCPMVFRNLRERFGIDDQD+QNS+TRSAP+ +DSQ R G RF T+YD+R++IKT++SE Sbjct: 80 KEYCPMVFRNLRERFGIDDQDFQNSLTRSAPLPNDSQARSGARFHTSYDKRYIIKTITSE 139 Query: 156 DVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTRNVFSHRLTVHRKY 215 DVAEMHNILKKYHQ+IVECHG TLLPQFLGMYRL VDGVE Y++VTRNVFSHRL+V+RKY Sbjct: 140 DVAEMHNILKKYHQYIVECHGITLLPQFLGMYRLNVDGVEIYVIVTRNVFSHRLSVYRKY 199 Query: 216 DLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLK 275 DLKGSTVAREASDKEKAK+LPT KDNDF+NEGQK+++ + +KK FLEKLK+DVEFLAQLK Sbjct: 200 DLKGSTVAREASDKEKAKELPTLKDNDFINEGQKIYIDDNNKKVFLEKLKKDVEFLAQLK 259 Query: 276 IMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGGNLLCSYGTPPDSPGNLLSFPR 335 +MDYSLLVGIHDV+RAEQEE+E EE +EE E+DG GTPPDSPGN L+ Sbjct: 260 LMDYSLLVGIHDVERAEQEEVECEENDGEEEGESDGTH-----PVGTPPDSPGNTLNSSP 314 Query: 336 FFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTVKHGAGAEI 395 PGEFDP++DVY +K HE+SP+KEVYFMAIIDILT YD KKKAAHAAKTVKHGAGAEI Sbjct: 315 PLAPGEFDPNIDVYGIKCHENSPRKEVYFMAIIDILTHYDAKKKAAHAAKTVKHGAGAEI 374 Query: 396 STVNPEQYSKRFNEFMSNIL 415 STVNPEQYSKRF +F+ +IL Sbjct: 375 STVNPEQYSKRFLDFIGHIL 394 >6CMW-A nrPDB Length = 394 Score = 491 bits (1264), Expect = e-139, Method: Composition-based stats. Identities = 119/383 (31%), Positives = 181/383 (47%), Gaps = 22/383 (5%) Query: 38 ASEPILSVLMWGVNHTINELSNVPVPVMLMPDDFKAYSKIKVDNHLFNKENLPSR----F 93 S + + G+ H++ LS P +LM DF+ I + + P F Sbjct: 13 TSSALKGAIQLGITHSVGSLSQKPERDVLM-QDFEVVESIFFPSQ--GSSSTPGHHHGDF 69 Query: 94 KFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVS 153 KFK Y P+ FR RE FGI DY S+ I + G G+ F + D F+IKTV Sbjct: 70 KFKTYAPIAFRYFREMFGIRPDDYLYSLCNEPLIELSNPGASGSLFYVSSDDEFIIKTVQ 129 Query: 154 SEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVTRNVFSHRLTVHR 213 ++ + +L Y + + + TLLP+F G+Y + DG +VV N+ + +H Sbjct: 130 HKEAEFLQTLLPGYFMNLNQ-NMRTLLPKFYGLYCVQADGKNIRIVVMNNLLPRAVPMHL 188 Query: 214 KYDLKGSTVAREASDKEKAKDLPTFKDNDFLNEGQKLHVGEESKKNFLEK-LKRDVEFLA 272 K+DLKGST R AS KE++K +PT+KD DF+ + + + E L + ++RD L Sbjct: 189 KFDLKGSTYKRRASPKERSKGVPTYKDLDFMQDMPEGILLENDHYTALSRTMQRDCRVLQ 248 Query: 273 QLKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGGNLLCSYGTPPDSPGNLLS 332 KIMDYSLLVGIH + RA +E D + + G L C+ + Sbjct: 249 SFKIMDYSLLVGIHILHRAGEE---ASTAVPDTQKKGQG-QKPLYCTAIESIQGESKSKT 304 Query: 333 FPRFFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTVKHGAG 392 P+ P + + + S ++ + F+ IIDIL Y KK H+ K + H G Sbjct: 305 SPQ--------PYESMGGIPAFNSKGERLLVFIGIIDILQSYRLVKKLEHSWKALLHD-G 355 Query: 393 AEISTVNPEQYSKRFNEFMSNIL 415 +S P Y+ RF +FM + + Sbjct: 356 DTVSVHRPSFYADRFQKFMCSTV 378 >1OHW-A nrPDB Length = 472 Score = 33.9 bits (76), Expect = 0.12, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 7/108 (6%) Query: 304 DEECENDGVGGNLLCSYGTPPDSPGNLLSFPR------FFGPGEFDPSVDVYAMKSHESS 357 DE G G D P ++++F + FF EF P+ + Sbjct: 298 DEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGGFFHKEEFRPNAPYRIFNTWLGD 357 Query: 358 PKKEVYFMAIIDILTPYDTKKKAAHAAKTVKHGAGAEISTVNPEQYSK 405 P K + +I+I+ D AAHA K + G + P+ S+ Sbjct: 358 PSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLD-LQARYPQFISR 404 >4HZI-A nrPDB Length = 294 Score = 31.6 bits (70), Expect = 0.70, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 8/61 (13%) Query: 222 VAREASDKEKAKDLPTFKDNDFLNEGQKLH----VGEESKKNFLEKLKRDVEFLAQLKIM 277 R+ S +E+ K L KD+D L++ +L+ GE+ K FL + + +FL IM Sbjct: 142 YYRDPSPEEETKTLQILKDSDLLSKKDQLYNTLSSGEKKKILFLRSIVNEPDFL----IM 197 Query: 278 D 278 D Sbjct: 198 D 198 >2YL9-A nrPDB Length = 457 Score = 30.4 bits (67), Expect = 1.6, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 2/133 (1%) Query: 235 LPTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQE 294 +P + L + + + + K L +LKR V+ ++L D LL+G +D R + Sbjct: 15 VPRGSHMEKLAKNKVISIDAGRKYFTLNQLKRIVDKASELGYSDVHLLLG-NDGLRFLLD 73 Query: 295 EMEVEERAEDEECENDGVGGNLLCSYGTPPDSPGNLLSFPRFFGPGEFDPSVDVYAMKSH 354 +M + +D + + D G L+ E+ S D+ + + Sbjct: 74 DMTI-TANGKTYASDDVKKAIIEGTKAYYDDPNGTALTQAEVTELIEYAKSKDIGLIPAI 132 Query: 355 ESSPKKEVYFMAI 367 S + +A+ Sbjct: 133 NSPGHMDAMLVAM 145 >1M7B-A nrPDB Length = 184 Score = 29.3 bits (64), Expect = 2.9, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 32/100 (32%), Gaps = 12/100 (12%) Query: 82 HLFNKENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSV--TRSAPI-----NSDSQGR 134 H+F K+ P + Y P VF N F ID Q + S+ T +P Sbjct: 25 HVFAKDCFP-----ENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDS 79 Query: 135 CGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVEC 174 R + +V + E+ +V C Sbjct: 80 DAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGC 119 >1GWN-A nrPDB Length = 205 Score = 29.3 bits (64), Expect = 3.0, Method: Composition-based stats. Identities = 21/100 (21%), Positives = 32/100 (32%), Gaps = 12/100 (12%) Query: 82 HLFNKENLPSRFKFKEYCPMVFRNLRERFGIDDQDYQNSV--TRSAPI-----NSDSQGR 134 H+F K+ P + Y P VF N F ID Q + S+ T +P Sbjct: 46 HVFAKDCFP-----ENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDS 100 Query: 135 CGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVEC 174 R + +V + E+ +V C Sbjct: 101 DAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGC 140 >2EKC-A nrPDB Length = 262 Score = 28.9 bits (63), Expect = 4.3, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 10/106 (9%) Query: 145 RRFVIKTVSSEDVAEMHNILKKYHQFIVECHGNTLLPQFLGMYRLTVDGVETYMVVT--- 201 F++ + E+ E+ ++KKY V T + + + D + ++ VT Sbjct: 124 DGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTT 183 Query: 202 --RNVFSH-----RLTVHRKYDLKGSTVAREASDKEKAKDLPTFKD 240 R + ++ +R+ K V S KE A+++ +F D Sbjct: 184 GAREKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHAREIGSFAD 229 >6CDD-A nrPDB Length = 474 Score = 28.9 bits (63), Expect = 4.4, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 236 PTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEE 295 P F DN F E ++ +VGE + + + K + E A + + D+ LL IH + +EE Sbjct: 375 PLFTDNIFPIENRE-YVGEAQEVSAVAKALKVHEADAPMNVSDFHLLCFIHQMSVLSKEE 433 Query: 296 M 296 Sbjct: 434 E 434 >6CHS-A nrPDB Length = 659 Score = 28.5 bits (62), Expect = 5.1, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Query: 236 PTFKDNDFLNEGQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEE 295 P F DN F E ++ +VGE + + + K + E A + + D+ LL IH + +EE Sbjct: 503 PLFTDNIFPIENRE-YVGEAQEVSAVAKALKVHEADAPMNVSDFHLLCFIHQMSVLSKEE 561 Query: 296 M 296 Sbjct: 562 E 562 >3RM5-A nrPDB Length = 550 Score = 28.5 bits (62), Expect = 5.8, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 10/79 (12%) Query: 104 RNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNI 163 + L+E FG+ D DY + R + R +R+ RR + + VA + Sbjct: 418 KRLKEVFGVKDPDYFQKIKRGPAL------RAYSRYFNDVSRRGNWQEL----VASLTPC 467 Query: 164 LKKYHQFIVECHGNTLLPQ 182 L Y + + + G P+ Sbjct: 468 LMGYGEALTKMKGKVTAPE 486 >3LDA-A nrPDB Length = 400 Score = 28.1 bits (61), Expect = 6.9, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 21/38 (55%) Query: 97 EYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGR 134 + P+ ++ +RFG+D D N+V + N+D Q R Sbjct: 223 TFRPVRLVSIAQRFGLDPDDALNNVAYARAYNADHQLR 260 >1SZP-A nrPDB Length = 321 Score = 28.1 bits (61), Expect = 6.9, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 21/38 (55%) Query: 97 EYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGR 134 + P+ ++ +RFG+D D N+V + N+D Q R Sbjct: 144 TFRPVRLVSIAQRFGLDPDDALNNVAYARAYNADHQLR 181 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.315 0.133 0.350 Lambda K H 0.267 0.0405 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,450,382 Number of Sequences: 36641 Number of extensions: 631448 Number of successful extensions: 1816 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 27 Number of HSP's that attempted gapping in prelim test: 1772 Number of HSP's gapped (non-prelim): 53 length of query: 416 length of database: 10,336,785 effective HSP length: 100 effective length of query: 316 effective length of database: 6,672,685 effective search space: 2108568460 effective search space used: 2108568460 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 60 (27.7 bits)