BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P62877
         (108 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

1U6G-B nrPDB                                                          227   1e-60
4A0K-B nrPDB                                                          204   5e-54
1LDK-C nrPDB                                                          190   2e-49
2ECL-A nrPDB                                                           78   8e-16
5G04-B nrPDB                                                           69   4e-13
5JG6-A nrPDB                                                           56   3e-09
2EP4-A nrPDB                                                           37   0.001
5D0M-C nrPDB                                                           30   0.22 
5D0I-A nrPDB                                                           30   0.23 
2ECT-A nrPDB                                                           30   0.24 
5ULH-C nrPDB                                                           30   0.30 
2L0B-A nrPDB                                                           28   0.84 
5AYS-A nrPDB                                                           28   0.94 
3KIC-A nrPDB                                                           27   1.4  
4RSO-A nrPDB                                                           27   2.4  
3NG9-A nrPDB                                                           26   3.0  
3OAH-A nrPDB                                                           26   3.8  
3J1Q-A nrPDB                                                           26   4.2  
5IPK-A nrPDB                                                           26   4.3  
6GLC-A nrPDB                                                           26   4.5  
5MWL-A nrPDB                                                           25   5.5  
3J1S-A nrPDB                                                           25   5.5  
3UX1-A nrPDB                                                           25   7.5  
5D1K-B nrPDB                                                           25   7.8  

>1U6G-B nrPDB
          Length = 108

 Score =  227 bits (578), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 108/108 (100%), Positives = 108/108 (100%)

Query: 1   MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ 60
           MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
Sbjct: 1   MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ 60

Query: 61  ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
           ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
Sbjct: 61  ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108


>4A0K-B nrPDB
          Length = 117

 Score =  204 bits (520), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 97/97 (100%), Positives = 97/97 (100%)

Query: 12  GTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVA 71
           GTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVA
Sbjct: 21  GTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVA 80

Query: 72  WGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
           WGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
Sbjct: 81  WGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 117


>1LDK-C nrPDB
          Length = 90

 Score =  190 bits (482), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 90/90 (100%), Positives = 90/90 (100%)

Query: 19  KKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHA 78
           KKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHA
Sbjct: 1   KKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHA 60

Query: 79  FHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
           FHFHCISRWLKTRQVCPLDNREWEFQKYGH
Sbjct: 61  FHFHCISRWLKTRQVCPLDNREWEFQKYGH 90


>2ECL-A nrPDB
          Length = 81

 Score = 78.2 bits (191), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 3/76 (3%)

Query: 32  LWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR 91
           +W+WD+  D CAICR  +MD C+ CQA       E+C V WG CNH+FH  C+S W+K  
Sbjct: 8   MWSWDVECDTCAICRVQVMDACLRCQAEN---KQEDCVVVWGECNHSFHNCCMSLWVKQN 64

Query: 92  QVCPLDNREWEFQKYG 107
             CPL  ++W  Q+ G
Sbjct: 65  NRCPLCQQDWVVQRIG 80


>5G04-B nrPDB
          Length = 84

 Score = 69.3 bits (168), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 8/88 (9%)

Query: 21  RFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFH 80
           + ++K WN VA W W    +NC ICR      C +C+        ++C + WG C+H FH
Sbjct: 2   KVKIKCWNGVATWLWVANDENCGICRMAFNGCCPDCKV-----PGDDCPLVWGQCSHCFH 56

Query: 81  FHCISRWLKTRQV---CPLDNREWEFQK 105
            HCI +WL  +QV   CP+  +EW+F++
Sbjct: 57  MHCILKWLHAQQVQQHCPMCRQEWKFKE 84


>5JG6-A nrPDB
          Length = 70

 Score = 56.2 bits (134), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 8/69 (11%)

Query: 40  DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV---CPL 96
           +NC ICR      C +C+        ++C + WG C+H FH HCI +WL  +QV   CP+
Sbjct: 7   ENCGICRMAFNGCCPDCKV-----PGDDCPLVWGQCSHCFHMHCILKWLHAQQVQQHCPM 61

Query: 97  DNREWEFQK 105
             +EW+F++
Sbjct: 62  CRQEWKFKE 70


>2EP4-A nrPDB
          Length = 74

 Score = 37.4 bits (85), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 14/24 (58%), Positives = 18/24 (75%)

Query: 75 CNHAFHFHCISRWLKTRQVCPLDN 98
          C HAFH  C+ +WL+ R+VCPL N
Sbjct: 36 CKHAFHRKCLIKWLEVRKVCPLCN 59


>5D0M-C nrPDB
          Length = 87

 Score = 30.0 bits (66), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 11/57 (19%)

Query: 59  NQASATSEECTVAWGV-----------CNHAFHFHCISRWLKTRQVCPLDNREWEFQ 104
            + S T E+CT+   +           C H FH  C+ +WL   + CP+   + E Q
Sbjct: 26  GEESDTDEKCTICLSMLEDGEDVRRLPCAHLFHQLCVDQWLAMSKKCPICRVDIETQ 82


>5D0I-A nrPDB
          Length = 97

 Score = 30.0 bits (66), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 11/49 (22%)

Query: 59 NQASATSEECTVAWGV-----------CNHAFHFHCISRWLKTRQVCPL 96
           + S T E+CT+   +           C H FH  C+ +WL   + CP+
Sbjct: 36 GEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPI 84


>2ECT-A nrPDB
          Length = 78

 Score = 30.0 bits (66), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 75  CNHAFHFHCISRWLKTRQVCPLDNREWEFQ 104
           CNH FH  CI  WL+    CP+  +    Q
Sbjct: 36  CNHLFHDSCIVPWLEQHDSCPVCRKSLTGQ 65


>5ULH-C nrPDB
          Length = 92

 Score = 29.6 bits (65), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 11/54 (20%)

Query: 62  SATSEECTVAWGV-----------CNHAFHFHCISRWLKTRQVCPLDNREWEFQ 104
           S T E+CT+   +           C H FH  C+ +WL   + CP+   + E Q
Sbjct: 34  SDTDEKCTICLSMLEDGEDVRRLPCAHLFHQLCVDQWLAMSKKCPICRVDIETQ 87


>2L0B-A nrPDB
          Length = 91

 Score = 28.1 bits (61), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 75 CNHAFHFHCISRWLKTRQVCPL 96
          C+H FH  C+S WL+    CP+
Sbjct: 61 CHHYFHKPCVSIWLQKSGTCPV 82


>5AYS-A nrPDB
          Length = 256

 Score = 28.1 bits (61), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)

Query: 62  SATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLD 97
           S  S    V +G C H   F   +R+L+TR + P+D
Sbjct: 209 SHPSPLSKVPFGTCQH---FLVANRYLETRSISPID 241


>3KIC-A nrPDB
          Length = 736

 Score = 27.3 bits (59), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 73  GVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
           GV N + ++HC S+WL  R V     R W    Y +
Sbjct: 220 GVGNSSGNWHCDSQWLGDR-VITTSTRTWALPTYNN 254


>4RSO-A nrPDB
          Length = 736

 Score = 26.6 bits (57), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 73  GVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
           GV N + ++HC S WL  R V     R W    Y +
Sbjct: 220 GVGNSSGNWHCDSTWLGDR-VITTSTRTWALPTYNN 254


>3NG9-A nrPDB
          Length = 736

 Score = 26.2 bits (56), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 73  GVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
           GV N + ++HC S WL  R V     R W    Y +
Sbjct: 220 GVGNASGNWHCDSTWLGDR-VITTSTRTWALPTYNN 254


>3OAH-A nrPDB
          Length = 534

 Score = 26.2 bits (56), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 73  GVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
           GV N + ++HC S WL  R V     R W    Y +
Sbjct: 18  GVGNASGNWHCDSTWLGDR-VITTSTRTWALPTYNN 52


>3J1Q-A nrPDB
          Length = 737

 Score = 25.8 bits (55), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 73  GVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
           GV N + ++HC S W+  R V     R W    Y +
Sbjct: 220 GVGNSSGNWHCDSTWMGDR-VITTSTRTWALPTYNN 254


>5IPK-A nrPDB
          Length = 735

 Score = 25.8 bits (55), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 73  GVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
           GV N + ++HC S W+  R V     R W    Y +
Sbjct: 220 GVGNSSGNWHCDSTWMGDR-VITTSTRTWALPTYNN 254


>6GLC-A nrPDB
          Length = 389

 Score = 25.8 bits (55), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 53  CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQ 92
           CI C   ++     +C     +C   FH +C++R L  RQ
Sbjct: 240 CITCTDVRSPVLVFQCNSRHVICLDCFHLYCVTR-LNDRQ 278


>5MWL-A nrPDB
          Length = 471

 Score = 25.4 bits (54), Expect = 5.5,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 3/27 (11%)

Query: 74  VCNHAFHFH---CISRWLKTRQVCPLD 97
           VC +  H H      +W K  + CPLD
Sbjct: 161 VCRYCMHQHLKVATGKWKKISKYCPLD 187


>3J1S-A nrPDB
          Length = 519

 Score = 25.4 bits (54), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 73  GVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
           GV N + ++HC S W+  R V     R W    Y +
Sbjct: 4   GVGNSSGNWHCDSTWMGDR-VITTSTRTWALPTYNN 38


>3UX1-A nrPDB
          Length = 518

 Score = 25.0 bits (53), Expect = 7.5,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 73  GVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
           GV + + ++HC S+WL  R V     R W    Y +
Sbjct: 2   GVGSSSGNWHCDSQWLGDR-VITTSTRTWALPTYNN 36


>5D1K-B nrPDB
          Length = 133

 Score = 25.0 bits (53), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 7/15 (46%), Positives = 12/15 (80%)

Query: 75 CNHAFHFHCISRWLK 89
          C H FH HC++R+++
Sbjct: 28 CYHYFHCHCLARYIQ 42


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

1U6G-B nrPDB                                                          167   9e-43
4A0K-B nrPDB                                                          153   2e-38
1LDK-C nrPDB                                                          133   2e-32
5G04-B nrPDB                                                          109   2e-25
2ECL-A nrPDB                                                           93   2e-20
5JG6-A nrPDB                                                           88   6e-19
2EP4-A nrPDB                                                           46   6e-06

Sequences not found previously or not previously below threshold:

2ECT-A nrPDB                                                           39   6e-04
5D0M-C nrPDB                                                           36   0.003
5D0I-A nrPDB                                                           36   0.004
5ULH-C nrPDB                                                           36   0.005
2L0B-A nrPDB                                                           32   0.040
3JBW-A nrPDB                                                           29   0.42 
1JM7-A nrPDB                                                           28   1.1  
6CG0-A nrPDB                                                           27   1.8  
2DJB-A nrPDB                                                           27   1.8  
5MWL-A nrPDB                                                           27   2.5  
2Y43-A nrPDB                                                           26   3.2  
3TOT-A nrPDB                                                           26   3.3  
2CSO-A nrPDB                                                           26   4.9  
1W4M-A nrPDB                                                           26   4.9  
4CCG-X nrPDB                                                           26   6.2  
5OLM-A nrPDB                                                           25   6.4  
5ODV-A nrPDB                                                           25   6.5  
5DKA-A nrPDB                                                           25   7.6  
5FI5-A nrPDB                                                           25   7.8  
4W8Y-A nrPDB                                                           25   8.9  
6CHG-D nrPDB                                                           25   9.6  
4QPL-A nrPDB                                                           25   9.6  

>1U6G-B nrPDB
          Length = 108

 Score =  167 bits (423), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 108/108 (100%), Positives = 108/108 (100%)

Query: 1   MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ 60
           MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
Sbjct: 1   MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ 60

Query: 61  ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
           ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
Sbjct: 61  ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108


>4A0K-B nrPDB
          Length = 117

 Score =  153 bits (385), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 97/97 (100%), Positives = 97/97 (100%)

Query: 12  GTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVA 71
           GTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVA
Sbjct: 21  GTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVA 80

Query: 72  WGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
           WGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
Sbjct: 81  WGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH 117


>1LDK-C nrPDB
          Length = 90

 Score =  133 bits (334), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 90/90 (100%), Positives = 90/90 (100%)

Query: 19  KKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHA 78
           KKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHA
Sbjct: 1   KKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHA 60

Query: 79  FHFHCISRWLKTRQVCPLDNREWEFQKYGH 108
           FHFHCISRWLKTRQVCPLDNREWEFQKYGH
Sbjct: 61  FHFHCISRWLKTRQVCPLDNREWEFQKYGH 90


>5G04-B nrPDB
          Length = 84

 Score =  109 bits (273), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 8/88 (9%)

Query: 21  RFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFH 80
           + ++K WN VA W W    +NC ICR      C +C+        ++C + WG C+H FH
Sbjct: 2   KVKIKCWNGVATWLWVANDENCGICRMAFNGCCPDCKV-----PGDDCPLVWGQCSHCFH 56

Query: 81  FHCISRWLKTRQV---CPLDNREWEFQK 105
            HCI +WL  +QV   CP+  +EW+F++
Sbjct: 57  MHCILKWLHAQQVQQHCPMCRQEWKFKE 84


>2ECL-A nrPDB
          Length = 81

 Score = 93.3 bits (230), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 3/76 (3%)

Query: 32  LWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR 91
           +W+WD+  D CAICR  +MD C+ CQA       E+C V WG CNH+FH  C+S W+K  
Sbjct: 8   MWSWDVECDTCAICRVQVMDACLRCQAEN---KQEDCVVVWGECNHSFHNCCMSLWVKQN 64

Query: 92  QVCPLDNREWEFQKYG 107
             CPL  ++W  Q+ G
Sbjct: 65  NRCPLCQQDWVVQRIG 80


>5JG6-A nrPDB
          Length = 70

 Score = 88.3 bits (217), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 8/73 (10%)

Query: 36  DIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV-- 93
               +NC ICR      C +C+        ++C + WG C+H FH HCI +WL  +QV  
Sbjct: 3   VANDENCGICRMAFNGCCPDCKV-----PGDDCPLVWGQCSHCFHMHCILKWLHAQQVQQ 57

Query: 94  -CPLDNREWEFQK 105
            CP+  +EW+F++
Sbjct: 58  HCPMCRQEWKFKE 70


>2EP4-A nrPDB
          Length = 74

 Score = 45.5 bits (106), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/24 (58%), Positives = 18/24 (75%)

Query: 75 CNHAFHFHCISRWLKTRQVCPLDN 98
          C HAFH  C+ +WL+ R+VCPL N
Sbjct: 36 CKHAFHRKCLIKWLEVRKVCPLCN 59


>2ECT-A nrPDB
          Length = 78

 Score = 38.6 bits (88), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 4/47 (8%)

Query: 53 CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 99
          C  C+ + A   S    V    CNH FH  CI  WL+    CP+  +
Sbjct: 18 CPVCKEDYALGES----VRQLPCNHLFHDSCIVPWLEQHDSCPVCRK 60


>5D0M-C nrPDB
          Length = 87

 Score = 36.3 bits (82), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 75  CNHAFHFHCISRWLKTRQVCPLDNREWEFQ 104
           C H FH  C+ +WL   + CP+   + E Q
Sbjct: 53  CAHLFHQLCVDQWLAMSKKCPICRVDIETQ 82


>5D0I-A nrPDB
          Length = 97

 Score = 35.9 bits (81), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 75  CNHAFHFHCISRWLKTRQVCPLDNREWEFQ 104
           C H FH  C+ +WL   + CP+   + E Q
Sbjct: 63  CMHLFHQLCVDQWLAMSKKCPICRVDIETQ 92


>5ULH-C nrPDB
          Length = 92

 Score = 35.5 bits (80), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query: 75  CNHAFHFHCISRWLKTRQVCPLDNREWEFQ 104
           C H FH  C+ +WL   + CP+   + E Q
Sbjct: 58  CAHLFHQLCVDQWLAMSKKCPICRVDIETQ 87


>2L0B-A nrPDB
          Length = 91

 Score = 32.5 bits (72), Expect = 0.040,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 4/47 (8%)

Query: 52 LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN 98
           C  C +       +  T     C+H FH  C+S WL+    CP+  
Sbjct: 42 CCPICCSE--YVKGDVATEL--PCHHYFHKPCVSIWLQKSGTCPVCR 84


>3JBW-A nrPDB
          Length = 764

 Score = 29.4 bits (64), Expect = 0.42,   Method: Composition-based stats.
 Identities = 9/26 (34%), Positives = 11/26 (42%), Gaps = 1/26 (3%)

Query: 75 CNHAFHFHCISRWLKT-RQVCPLDNR 99
          C H F   CI R+       CP  N+
Sbjct: 44 CRHLFCRLCIIRYTHALGPNCPTCNQ 69


>1JM7-A nrPDB
          Length = 112

 Score = 27.8 bits (60), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 3/30 (10%)

Query: 74  VCNHAFHFHCISRWLKTRQ---VCPLDNRE 100
            C+H F   C+ + L  ++    CPL   +
Sbjct: 38  KCDHIFCKFCMLKLLNQKKGPSQCPLCKND 67


>6CG0-A nrPDB
          Length = 775

 Score = 27.1 bits (58), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/25 (40%), Positives = 10/25 (40%), Gaps = 1/25 (4%)

Query: 75 CNHAFHFHCISRWLKTR-QVCPLDN 98
          C H F   CI R LK     CP   
Sbjct: 41 CKHLFCRICILRCLKVMGSYCPSCR 65


>2DJB-A nrPDB
          Length = 72

 Score = 27.1 bits (58), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 9/25 (36%)

Query: 74 VCNHAFHFHCISRWLKTRQVCPLDN 98
           C H F   CI R       CP  N
Sbjct: 33 ECLHTFCKSCIVRHFYYSNRCPKCN 57


>5MWL-A nrPDB
          Length = 471

 Score = 26.7 bits (57), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 3/27 (11%)

Query: 74  VCNHAFHFH---CISRWLKTRQVCPLD 97
           VC +  H H      +W K  + CPLD
Sbjct: 161 VCRYCMHQHLKVATGKWKKISKYCPLD 187


>2Y43-A nrPDB
          Length = 99

 Score = 26.3 bits (56), Expect = 3.2,   Method: Composition-based stats.
 Identities = 7/24 (29%), Positives = 12/24 (50%)

Query: 74 VCNHAFHFHCISRWLKTRQVCPLD 97
           C+H +   CI ++L  +  CP  
Sbjct: 40 QCSHNYCSLCIRKFLSYKTQCPTC 63


>3TOT-A nrPDB
          Length = 226

 Score = 26.3 bits (56), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 17  AGKKRFEVKKWNAVALWAWDIVV 39
           +G++R EV+ W A+A    D  V
Sbjct: 85  SGRERVEVRCWEALADGLLDAAV 107


>2CSO-A nrPDB
          Length = 127

 Score = 25.5 bits (54), Expect = 4.9,   Method: Composition-based stats.
 Identities = 7/17 (41%), Positives = 10/17 (58%)

Query: 76 NHAFHFHCISRWLKTRQ 92
          NH F  +C+  WL + Q
Sbjct: 45 NHCFTGNCVIDWLVSNQ 61


>1W4M-A nrPDB
          Length = 103

 Score = 25.5 bits (54), Expect = 4.9,   Method: Composition-based stats.
 Identities = 7/17 (41%), Positives = 10/17 (58%)

Query: 76 NHAFHFHCISRWLKTRQ 92
          NH F  +C+  WL + Q
Sbjct: 33 NHCFTGNCVIDWLVSNQ 49


>4CCG-X nrPDB
          Length = 88

 Score = 25.5 bits (54), Expect = 6.2,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 14/37 (37%)

Query: 53 CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK 89
          C  C A Q   T  +       C   FH  C+  WL+
Sbjct: 20 CGICYAYQLDGTIPDQVCDNSQCGQPFHQICLYEWLR 56


>5OLM-A nrPDB
          Length = 132

 Score = 25.1 bits (53), Expect = 6.4,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 1/34 (2%)

Query: 74  VCNHAFHFHCISRWLKTR-QVCPLDNREWEFQKY 106
            C H+F   CIS+  K    VCP+  + +  +  
Sbjct: 33  ECGHSFCQECISQVGKGGGSVCPVCRQRFLLKNL 66


>5ODV-A nrPDB
          Length = 281

 Score = 25.1 bits (53), Expect = 6.5,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 8/59 (13%)

Query: 14  NSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW 72
           N+ A K +FE   W +     +D+  +   +  N  M  CI+      + TS +    W
Sbjct: 95  NTRATKTQFE--SWYSAVKVEYDLNDEQMGVIMNGFMVWCID------NGTSPDVNGVW 145


>5DKA-A nrPDB
          Length = 232

 Score = 25.1 bits (53), Expect = 7.6,   Method: Composition-based stats.
 Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 1/25 (4%)

Query: 75 CNHAFHFHCISRWLKTRQ-VCPLDN 98
          C H F   CI+  LK  +  CP   
Sbjct: 52 CGHVFCRSCIATSLKNNKWTCPYCR 76


>5FI5-A nrPDB
          Length = 357

 Score = 25.1 bits (53), Expect = 7.8,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 13  TNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIE 55
           T  G+  ++F+V     VA  +       C +C N + + C E
Sbjct: 84  TEVGSKVQKFKVGDKVGVA--SIIETCGKCEMCTNEVENYCPE 124


>4W8Y-A nrPDB
          Length = 888

 Score = 24.7 bits (52), Expect = 8.9,   Method: Composition-based stats.
 Identities = 6/18 (33%), Positives = 9/18 (50%)

Query: 80  HFHCISRWLKTRQVCPLD 97
           H +  S WL    +CP+ 
Sbjct: 481 HDNLKSLWLDEEPLCPMC 498


>6CHG-D nrPDB
          Length = 439

 Score = 24.7 bits (52), Expect = 9.6,   Method: Composition-based stats.
 Identities = 7/24 (29%), Positives = 12/24 (50%)

Query: 12 GTNSGAGKKRFEVKKWNAVALWAW 35
          GT+SGA  +  +   W+    + W
Sbjct: 66 GTHSGAHTRSVQSVCWSNDGRYLW 89


>4QPL-A nrPDB
          Length = 155

 Score = 24.7 bits (52), Expect = 9.6,   Method: Composition-based stats.
 Identities = 7/26 (26%), Positives = 11/26 (42%)

Query: 75  CNHAFHFHCISRWLKTRQVCPLDNRE 100
           C H F + C+       + C L  +E
Sbjct: 23  CKHVFCYLCVKGASWLGKRCALCRQE 48


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.313    0.124    0.476 

Lambda     K      H
   0.267   0.0382    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,178,068
Number of Sequences: 36641
Number of extensions: 180469
Number of successful extensions: 567
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 503
Number of HSP's gapped (non-prelim): 90
length of query: 108
length of database: 10,336,785
effective HSP length: 74
effective length of query: 34
effective length of database: 7,625,351
effective search space: 259261934
effective search space used: 259261934
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.1 bits)
S2: 52 (24.7 bits)