BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P62745 (196 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2FV8-A nrPDB 382 e-107 5C2K-A nrPDB 346 4e-96 5ZHX-e nrPDB 343 4e-95 5JCP-B nrPDB 333 3e-92 5ZVP-A nrPDB 269 6e-73 3A58-B nrPDB 261 1e-70 3TH5-A nrPDB 216 7e-57 3RYT-C nrPDB 212 7e-56 2WKQ-A nrPDB 209 8e-55 2W2X-A nrPDB 204 2e-53 1RYH-A nrPDB 204 3e-53 2J1L-A nrPDB 203 4e-53 3VHL-B nrPDB 201 1e-52 2ATX-A nrPDB 199 5e-52 5VCU-A nrPDB 197 3e-51 1M7B-A nrPDB 196 6e-51 1GWN-A nrPDB 195 1e-50 4MIT-A nrPDB 190 3e-49 2WBL-C nrPDB 188 1e-48 3BWD-D nrPDB 184 2e-47 2Q3H-A nrPDB 184 2e-47 2NTY-C nrPDB 184 3e-47 2J0V-A nrPDB 181 2e-46 4U5X-A nrPDB 176 6e-45 2REX-B nrPDB 165 1e-41 3REG-A nrPDB 159 8e-40 5HZH-A nrPDB 155 7e-39 5SZH-B nrPDB 93 9e-20 2RHD-A nrPDB 92 2e-19 3L0I-B nrPDB 92 2e-19 1YZU-A nrPDB 90 5e-19 1Z0A-A nrPDB 90 8e-19 2F9L-A nrPDB 89 2e-18 3CPH-A nrPDB 88 2e-18 2OCY-C nrPDB 87 4e-18 2WWX-A nrPDB 87 4e-18 4LHX-A nrPDB 87 4e-18 2KE5-A nrPDB 87 4e-18 5SZI-A nrPDB 87 4e-18 6O62-A nrPDB 87 5e-18 4G01-B nrPDB 87 7e-18 5FBL-B nrPDB 86 7e-18 2OCB-A nrPDB 86 8e-18 2A5J-A nrPDB 86 1e-17 6IF2-B nrPDB 86 1e-17 5YOZ-A nrPDB 86 2e-17 1WMS-A nrPDB 85 2e-17 4QXA-A nrPDB 85 2e-17 4FMC-F nrPDB 85 2e-17 4UJ4-A nrPDB 85 3e-17 1ZC4-A nrPDB 84 3e-17 2G6B-A nrPDB 84 4e-17 5LPN-A nrPDB 84 5e-17 5SZJ-A nrPDB 83 6e-17 2EW1-A nrPDB 83 8e-17 4RKE-A nrPDB 82 1e-16 5CM8-B nrPDB 82 2e-16 3CUE-F nrPDB 82 2e-16 1X3S-A nrPDB 81 2e-16 4M8N-E nrPDB 81 3e-16 1YZN-A nrPDB 81 3e-16 3DZ8-A nrPDB 81 3e-16 4KYI-B nrPDB 80 5e-16 1Z22-A nrPDB 80 8e-16 5XR6-A nrPDB 79 8e-16 2GF9-A nrPDB 79 1e-15 1TU4-A nrPDB 79 1e-15 2FFQ-A nrPDB 79 1e-15 1EK0-A nrPDB 78 2e-15 4DXA-A nrPDB 78 3e-15 3RAB-A nrPDB 77 3e-15 4RKF-A nrPDB 77 4e-15 2BMD-A nrPDB 77 4e-15 5UB8-A nrPDB 77 6e-15 1Z06-A nrPDB 77 7e-15 2G77-B nrPDB 77 7e-15 1Z0F-A nrPDB 77 7e-15 2IL1-A nrPDB 76 8e-15 2HEI-A nrPDB 76 1e-14 2HUP-A nrPDB 76 1e-14 2O52-A nrPDB 76 1e-14 3CPJ-B nrPDB 75 2e-14 1ZBD-A nrPDB 74 4e-14 3BFK-A nrPDB 74 6e-14 2P5S-A nrPDB 74 6e-14 2GIL-A nrPDB 74 6e-14 2ERX-A nrPDB 72 1e-13 3T5G-A nrPDB 71 2e-13 2N1B-A nrPDB 70 4e-13 5WDQ-A nrPDB 70 6e-13 5LEF-A nrPDB 70 7e-13 3CON-A nrPDB 70 7e-13 5UWI-A nrPDB 70 8e-13 5CLL-A nrPDB 70 8e-13 5XOJ-A nrPDB 69 1e-12 5LDD-C nrPDB 69 2e-12 2FG5-A nrPDB 69 2e-12 3RWM-B nrPDB 69 2e-12 3WYF-A nrPDB 68 3e-12 4KLZ-A nrPDB 68 3e-12 5UHV-A nrPDB 67 3e-12 1D5C-A nrPDB 67 4e-12 4KU4-A nrPDB 67 4e-12 2F7S-A nrPDB 67 5e-12 2IEY-A nrPDB 67 6e-12 2IEZ-A nrPDB 67 7e-12 4PHF-A nrPDB 65 2e-11 4WA7-A nrPDB 65 2e-11 6IYB-A nrPDB 64 3e-11 5WDR-A nrPDB 64 3e-11 3TSO-A nrPDB 64 4e-11 3OES-A nrPDB 64 6e-11 2GF0-A nrPDB 63 7e-11 6HUF-A nrPDB 63 9e-11 2ERY-A nrPDB 62 2e-10 4DJT-A nrPDB 61 2e-10 2ATV-A nrPDB 61 3e-10 3BC1-A nrPDB 60 7e-10 1YVD-A nrPDB 60 7e-10 3E5H-A nrPDB 59 1e-09 3PIR-A nrPDB 59 2e-09 3CBQ-A nrPDB 58 3e-09 2FN4-A nrPDB 58 3e-09 3RAP-R nrPDB 57 5e-09 3Q85-A nrPDB 54 6e-08 3CLV-A nrPDB 54 6e-08 5XC3-A nrPDB 52 2e-07 5C1S-A nrPDB 51 3e-07 2NZJ-A nrPDB 50 4e-07 3Q72-A nrPDB 50 6e-07 2CJW-A nrPDB 49 1e-06 2G3Y-A nrPDB 49 2e-06 6FF8-A nrPDB 46 1e-05 2YC4-C nrPDB 45 1e-05 4CZ2-A nrPDB 45 1e-05 4YLG-A nrPDB 40 7e-04 1YZG-A nrPDB 40 9e-04 3D6T-B nrPDB 39 0.001 5DE3-A nrPDB 39 0.001 2AL7-A nrPDB 39 0.001 3LRP-A nrPDB 39 0.002 4ILE-A nrPDB 39 0.002 2H16-A nrPDB 38 0.002 3C5C-A nrPDB 38 0.002 4ZI3-A nrPDB 36 0.010 5UF8-A nrPDB 36 0.010 4WNR-A nrPDB 36 0.011 2LKD-A nrPDB 36 0.011 6FAE-B nrPDB 35 0.020 3AQ4-A nrPDB 35 0.021 3O47-A nrPDB 35 0.022 2H57-A nrPDB 34 0.040 5NZV-F nrPDB 34 0.048 3T1O-A nrPDB 33 0.057 4V0N-A nrPDB 33 0.059 3BH6-A nrPDB 33 0.086 6CES-A nrPDB 33 0.11 3DPU-A nrPDB 32 0.14 2HJR-A nrPDB 32 0.18 2QAG-A nrPDB 31 0.41 3H2Y-A nrPDB 30 0.46 3FTQ-A nrPDB 30 0.51 6DQW-A nrPDB 30 0.77 3P7M-A nrPDB 30 0.77 4ND4-A nrPDB 30 0.90 5YMX-A nrPDB 29 1.5 5NTF-A nrPDB 28 2.0 4PLW-A nrPDB 28 2.3 4PLF-A nrPDB 28 2.4 6HLU-A nrPDB 28 2.7 1JXH-A nrPDB 28 2.9 3CB4-D nrPDB 28 3.4 5WU6-A nrPDB 28 3.6 5WU3-A nrPDB 27 3.9 3V7N-A nrPDB 27 4.4 1MOZ-A nrPDB 27 5.4 5IRR-A nrPDB 27 6.5 3EC1-A nrPDB 26 8.6 6HV9-A nrPDB 26 9.9 >2FV8-A nrPDB Length = 207 Score = 382 bits (981), Expect = e-107, Method: Compositional matrix adjust. Identities = 184/186 (98%), Positives = 185/186 (99%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 + IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA Sbjct: 22 SMIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 81 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDL 121 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDL Sbjct: 82 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDL 141 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK Sbjct: 142 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 201 Query: 182 RYGSQN 187 RYGSQN Sbjct: 202 RYGSQN 207 >5C2K-A nrPDB Length = 415 Score = 346 bits (887), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 163/191 (85%), Positives = 177/191 (92%), Gaps = 1/191 (0%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 MAAIRKKLV+VGDGACGKTCLLIVFSKD+FPEVYVPTVFENYVADIEVDGKQVELALWDT Sbjct: 8 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 67 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKD 120 AGQEDYDRLRPLSYPDTDVILMCFS+DSPDSLENIPEKW PEVKHFCPNVPIILV NKKD Sbjct: 68 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 127 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 LR+DEH R ELA+MKQEPV+ ++GR MA RI A+ Y+ECSAKTK+GVREVFE ATRAALQ Sbjct: 128 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 187 Query: 181 KRYG-SQNGCI 190 R G ++GC+ Sbjct: 188 ARRGKKKSGCL 198 >5ZHX-e nrPDB Length = 198 Score = 343 bits (879), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 163/191 (85%), Positives = 177/191 (92%), Gaps = 1/191 (0%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 MAAIRKKLV+VGDGACGKTCLLIVFSKD+FPEVYVPTVFENYVADIEVDGKQVELALWDT Sbjct: 6 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 65 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKD 120 AGQEDYDRLRPLSYPDTDVILMCFS+DSPDSLENIPEKW PEVKHFCPNVPIILV NKKD Sbjct: 66 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 125 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 LR+DEH R ELA+MKQEPV+ ++GR MA RI A+ Y+ECSAKTK+GVREVFE ATRAALQ Sbjct: 126 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 185 Query: 181 KRYG-SQNGCI 190 R G ++GC+ Sbjct: 186 ARRGKKKSGCL 196 >5JCP-B nrPDB Length = 419 Score = 333 bits (853), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 157/179 (87%), Positives = 168/179 (93%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 AAIRKKLV+VGDGACGKTCLLIV SKD+FPEVYVPTVFENYVADIEVDGKQVELALWDTA Sbjct: 240 AAIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 299 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDL 121 GQEDYDRLRPLSYPDTDVILMCFS+DSPDSLENIPEKW PEVKHFCPNVPIILV NKKDL Sbjct: 300 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 359 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 R+DEH R ELA+MKQEPV+ ++GR MA RI A+ Y+ECSAKTK+GVREVFE ATRAALQ Sbjct: 360 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 418 >5ZVP-A nrPDB Length = 181 Score = 269 bits (687), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 129/179 (72%), Positives = 146/179 (81%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 MA IR+KLV+VGDGACGKTCLLIV SK FPEVYVPTVFENYVAD+EVDGK VELALWDT Sbjct: 1 MAEIRRKLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDT 60 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKD 120 AGQEDYDRLRPLSYPD+ VIL+CF++DSPDSL+N+ EKW+ EV HFC +PIILV KKD Sbjct: 61 AGQEDYDRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKD 120 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 LR D EL + Q+PV + G + +I AY YLECSA+T EGVREVFE ATRAAL Sbjct: 121 LRHDPKTIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAAL 179 >3A58-B nrPDB Length = 188 Score = 261 bits (668), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 123/180 (68%), Positives = 149/180 (82%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 62 +IR+KLV+VGDGACGKTCLLIV SK +FPEVYVPTVFENYVAD+EVDG++VELALWDTAG Sbjct: 8 SIRRKLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 Query: 63 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLR 122 QEDYDRLRPLSYPD++V+L+CFS+D PDSLEN+ EKW+ EV HFC VPIILV K DLR Sbjct: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLR 127 Query: 123 SDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 182 +D +L + Q+PV + +G+++A +I A Y ECSAKT GVREVFE ATRA+L + Sbjct: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGK 187 >3TH5-A nrPDB Length = 204 Score = 216 bits (549), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 104/173 (60%), Positives = 122/173 (70%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K VVVGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDTAGQEDY Sbjct: 32 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 91 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 DRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CPN PIILV K DLR D+ Sbjct: 92 DRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKD 151 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 +L K P+ G AMA I A YLECSA T+ G++ VF+ A RA L Sbjct: 152 TIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 204 >3RYT-C nrPDB Length = 180 Score = 212 bits (540), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 106/179 (59%), Positives = 124/179 (69%), Gaps = 2/179 (1%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 M AI K VVVGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDT Sbjct: 4 MQAI--KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDT 61 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKD 120 AG EDYDRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CPN PIILV K D Sbjct: 62 AGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLD 121 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 LR D+ +L K P+ G AMA I A YLECSA T+ G++ VF+ A RA L Sbjct: 122 LRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 180 >2WKQ-A nrPDB Length = 332 Score = 209 bits (531), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 101/173 (58%), Positives = 120/173 (69%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K VVVGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDTAG EDY Sbjct: 157 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGLEDY 216 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 DRLRPLSYP TDV L+CFS+ SP S ++ KW PEV+H CPN PIILV K DLR D+ Sbjct: 217 DRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKD 276 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 +L K P+ G AMA I A YLECSA T+ G++ VF+ A RA L Sbjct: 277 TIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 329 >2W2X-A nrPDB Length = 185 Score = 204 bits (518), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 99/173 (57%), Positives = 120/173 (69%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K VVVGD A GKTCLLI ++ + FP Y+PTVF+NY A++ VD K V L LWDTAGQEDY Sbjct: 11 KCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDY 70 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 DRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CP+ PIILV K DLR D+ Sbjct: 71 DRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLRDDKD 130 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 +L K P+ G A+A I + YLECSA T+ G++ VF+ A RA L Sbjct: 131 TIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVL 183 >1RYH-A nrPDB Length = 203 Score = 204 bits (518), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 107/198 (54%), Positives = 125/198 (63%), Gaps = 21/198 (10%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 M AI K VVVGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDT Sbjct: 3 MQAI--KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDT 60 Query: 61 AGQEDYDRLRPLSYPDT-------------------DVILMCFSVDSPDSLENIPEKWVP 101 AGQEDYDRLRPLSYP T DV L+CFS+ SP S EN+ KW P Sbjct: 61 AGQEDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYP 120 Query: 102 EVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSA 161 EV+H CPN PIILV K DLR D+ +L K P+ G AMA I A YLECSA Sbjct: 121 EVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSA 180 Query: 162 KTKEGVREVFETATRAAL 179 T+ G++ VF+ A RA L Sbjct: 181 LTQRGLKTVFDEAIRAVL 198 >2J1L-A nrPDB Length = 214 Score = 203 bits (516), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 95/176 (53%), Positives = 119/176 (67%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K+V+VGDG CGKT LL+VF+ FPE Y PTVFE Y+ +++V GK V L +WDTAGQ+DY Sbjct: 36 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 95 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 DRLRPL YPD V+L+CF V SP+S +NI +W PEV HFC VPII+V K DLR D+ Sbjct: 96 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLRKDKS 155 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 182 + +L R EPV G+ MA + A YLECSA+ + V VF+ A AL R Sbjct: 156 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 211 >3VHL-B nrPDB Length = 195 Score = 201 bits (512), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 93/174 (53%), Positives = 122/174 (70%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K VVVGDGA GK CLLI ++ ++FP YVPTVF+NY + + G+ L L+DTAGQEDY Sbjct: 12 KCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 71 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 DRLRPLSYP TDV L+CFSV SP S EN+ EKWVPE+ H CP P +LV + DLR D Sbjct: 72 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 131 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 +LA+ KQ+P+ + +A ++A Y+ECSA T++G++ VF+ A AAL+ Sbjct: 132 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 185 >2ATX-A nrPDB Length = 194 Score = 199 bits (507), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 95/178 (53%), Positives = 125/178 (70%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 A+ K VVVGDGA GKTCLL+ ++ D FPE YVPTVF++Y + V GKQ L L+DTA Sbjct: 15 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 74 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDL 121 GQEDYDRLRPLSYP TDV L+CFSV +P S +N+ E+WVPE+K + PNVP +L+ + DL Sbjct: 75 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDL 134 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 R D L MK++P+ + G+ +A I A Y+ECSA T++G++ VF+ A A L Sbjct: 135 RDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 192 >5VCU-A nrPDB Length = 208 Score = 197 bits (500), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 97/176 (55%), Positives = 122/176 (69%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K VVVGDGA GKT LLI +S FPE YVPTVF+NY +I V +AL+DTAGQEDY Sbjct: 13 KCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYNKNIPYGDGIVSIALYDTAGQEDY 72 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 DRLRPLSYPDTDV L+CFS+++P+SLEN KW E+KH+ P+ PI+LV K DL+ DE Sbjct: 73 DRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHYNPDTPIVLVGTKLDLKKDEE 132 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 182 +L K PV T+ G+ M +I+A Y+ECSAKT E + E F A A+++R Sbjct: 133 YVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAMKQR 188 >1M7B-A nrPDB Length = 184 Score = 196 bits (497), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 90/179 (50%), Positives = 126/179 (70%), Gaps = 1/179 (0%) Query: 4 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 ++ K+VVVGD CGKT LL VF+KD FPE YVPTVFENY A E+D +++EL+LWDT+G Sbjct: 6 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGS 65 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRS 123 YD +RPLSYPD+D +L+CF + P++L+++ +KW E++ FCPN ++LV K DLR+ Sbjct: 66 PYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRT 125 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSA-KTKEGVREVFETATRAALQK 181 D EL+ +Q PV D G MA +I A Y+ECSA +++ VR++F AT A + K Sbjct: 126 DVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNK 184 >1GWN-A nrPDB Length = 205 Score = 195 bits (496), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 90/179 (50%), Positives = 126/179 (70%), Gaps = 1/179 (0%) Query: 4 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 ++ K+VVVGD CGKT LL VF+KD FPE YVPTVFENY A E+D +++EL+LWDT+G Sbjct: 27 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGS 86 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRS 123 YD +RPLSYPD+D +L+CF + P++L+++ +KW E++ FCPN ++LV K DLR+ Sbjct: 87 PYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRT 146 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSA-KTKEGVREVFETATRAALQK 181 D EL+ +Q PV D G MA +I A Y+ECSA +++ VR++F AT A + K Sbjct: 147 DVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNK 205 >4MIT-A nrPDB Length = 186 Score = 190 bits (483), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 90/174 (51%), Positives = 114/174 (65%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 KLVVVGDGA GKTCLLI +S +FPE Y+PTVF+NYV + +Q++LALWDTAG E+Y Sbjct: 12 KLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTAGTRQIQLALWDTAGLEEY 71 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 D+LRPLSY + L+CFSV S S +N+ KW PEV HF P VPIILV K D R+D Sbjct: 72 DQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVGTKLDTRNDPA 131 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 + L + T G + RI+A Y+ECSAKT E ++ VF+ A + L Sbjct: 132 IVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAVKTVLM 185 >2WBL-C nrPDB Length = 180 Score = 188 bits (478), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 92/178 (51%), Positives = 119/178 (66%), Gaps = 10/178 (5%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V VGDGA GKTC+LI ++ + FP YVPTVF+N+ A++ VDG V L LWDTAGQEDY Sbjct: 8 KCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDY 67 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 +RLRPLSY DV L+ FS+ S S ENI +KW+PE+KH+ P +PI+LV K DLR D+ Sbjct: 68 NRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKLDLRDDKQ 127 Query: 127 VRTELARMKQEP----VRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 +K P + T G + I A YLECS+KT++ V+ VF+TA R AL+ Sbjct: 128 F------LKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVALR 179 >3BWD-D nrPDB Length = 182 Score = 184 bits (467), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 91/181 (50%), Positives = 120/181 (66%), Gaps = 3/181 (1%) Query: 1 MAAIR-KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWD 59 M+A R K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWD Sbjct: 3 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 62 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKK 119 TAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW+PE+KH+ P VPI+LV K Sbjct: 63 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 122 Query: 120 DLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 DLR D+ + P+ T G + I A Y+ECS+K++E V+ VF+ A R L Sbjct: 123 DLRDDKQFFID--HPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVL 180 Query: 180 Q 180 Q Sbjct: 181 Q 181 >2Q3H-A nrPDB Length = 201 Score = 184 bits (466), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 84/174 (48%), Positives = 122/174 (70%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V+VGDGA GKT L++ ++ + +P Y+PT F+N+ A + VDG+ V L L DTAGQ+++ Sbjct: 22 KCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEF 81 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 D+LRPL Y +TD+ L+CFSV SP S +N+ EKWVPE++ CP PIILV + DLR D Sbjct: 82 DKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVK 141 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 V EL + K++PV + + +A I+A Y+ECSA T++ ++EVF+ A A +Q Sbjct: 142 VLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFDAAIVAGIQ 195 >2NTY-C nrPDB Length = 180 Score = 184 bits (466), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 89/181 (49%), Positives = 121/181 (66%), Gaps = 3/181 (1%) Query: 1 MAAIR-KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWD 59 M+A R K V VGDGA GKTC+LI ++ + FP YVPTVF+N+ A++ VDG V L LWD Sbjct: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKK 119 TAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW+PE++H+ P VPIILV K Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120 Query: 120 DLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 DLR D+ + P+ T+ G + I + Y+ECS+KT++ V+ VF+ A + L Sbjct: 121 DLRDDKQFFID--HPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVL 178 Query: 180 Q 180 Q Sbjct: 179 Q 179 >2J0V-A nrPDB Length = 212 Score = 181 bits (459), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 84/174 (48%), Positives = 119/174 (68%), Gaps = 4/174 (2%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V VGDGA GKTC+LI ++ ++FP Y+PTVF+N+ A++ VDG+ V L LWDTAGQEDY Sbjct: 11 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWDTAGQEDY 70 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 RLRPLSY D+ ++ FS+ S S EN+ +KW+PE++ F PNVPI+LV K DLR D+ Sbjct: 71 SRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRDDKG 130 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 + + + + G + +I A Y+ECS+KT++ V+ VF+TA + LQ Sbjct: 131 YLADHTNV----ITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQ 180 >4U5X-A nrPDB Length = 178 Score = 176 bits (446), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 85/175 (48%), Positives = 115/175 (65%), Gaps = 4/175 (2%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V VGDGA GKTC+LI ++ ++FP Y+PTVF+N+ A++ VDG V L LWDTAG EDY Sbjct: 7 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGLEDY 66 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 RLRPLSY DV ++ FS+ S S EN+ +KW+PE++ F P VP++LV K DLR D Sbjct: 67 SRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLRED-- 124 Query: 127 VRTELA-RMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 R LA + T+ G + I A Y+ECS+KT+ ++ VF+TA + LQ Sbjct: 125 -RAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 178 >2REX-B nrPDB Length = 197 Score = 165 bits (418), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 80/178 (44%), Positives = 117/178 (65%), Gaps = 1/178 (0%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 R KLV+VGD CGKT +L V +KD +PE YVPTVFENY A +E + ++VEL+LWDT+G Sbjct: 10 RCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVELSLWDTSGSP 69 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSD 124 YD +RPL Y D+D +L+CF + P+++++ +KW E+ +CP+ ++L+ K DLR+D Sbjct: 70 YYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLIGCKTDLRTD 129 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKE-GVREVFETATRAALQK 181 EL+ KQ P+ + G A+A ++ A YLE SA T E + +F TA+ L K Sbjct: 130 LSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTASMLCLNK 187 >3REG-A nrPDB Length = 194 Score = 159 bits (402), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 79/168 (47%), Positives = 106/168 (63%), Gaps = 10/168 (5%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K+VVVGDGA GKTCLL+ FSK E P YVPTVFEN+ ++ ++ L LWDTAGQE+Y Sbjct: 25 KIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILHLWDTAGQEEY 84 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 DRLRPLSY D+DV+L+CF+V++ S +NI KW PE+KH+ +LV K DLR D Sbjct: 85 DRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYIDTAKTVLVGLKVDLRKD-- 142 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETA 174 + V +G + ++ Y+E S+ K G+ EVFE + Sbjct: 143 --------GSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKS 182 >5HZH-A nrPDB Length = 332 Score = 155 bits (393), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 76/130 (58%), Positives = 87/130 (66%) Query: 50 GKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN 109 GK V L LWDTAG EDYDRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CPN Sbjct: 200 GKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPN 259 Query: 110 VPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVRE 169 PIILV K DLR D+ +L K P+ G AMA I A YLECSA T+ G++ Sbjct: 260 TPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKT 319 Query: 170 VFETATRAAL 179 VF+ A RA L Sbjct: 320 VFDEAIRAVL 329 Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 32/57 (56%), Positives = 40/57 (70%), Gaps = 2/57 (3%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELAL 57 M AI K VVVGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDG + L Sbjct: 4 MQAI--KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGSGLATTL 58 >5SZH-B nrPDB Length = 203 Score = 92.8 bits (229), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 17/180 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ + IE+DGK ++L +WDTAGQE Sbjct: 12 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 71 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP-NVPIILVANKKDLRSD 124 + + Y I++ + V +S N+ ++W+ E+ + NV +LV NK DL + Sbjct: 72 FRTITSSYYRGAHGIIVVYDVTDQESYANV-KQWLQEIDRYASENVNKLLVGNKSDLTTK 130 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRYG 184 + V A+ + + +LE SAK V + F T A ++KR G Sbjct: 131 KVVDNTTAKEFADSL-------------GIPFLETSAKNATNVEQAFMTMA-AEIKKRMG 176 >2RHD-A nrPDB Length = 175 Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 16/169 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++GD GK+CLL+ F+ D + + Y+ T+ ++ + I ++ K V+L +WDTAGQE Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQER 70 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRSD 124 + + Y I++ + V DS +N+ + W+ E+ + NV +LV NK DL S Sbjct: 71 FRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAMENVNKLLVGNKCDLVS- 128 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFET 173 + V +D+GR +A ++E SAK V + F T Sbjct: 129 -----------KRVVTSDEGRELADS-HGIKFIETSAKNAYNVEQAFHT 165 >3L0I-B nrPDB Length = 199 Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 17/180 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ + IE+DGK ++L +WDTAGQE Sbjct: 35 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 94 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP-NVPIILVANKKDLRSD 124 + + Y I++ + V +S N+ ++W+ E+ + NV +LV NK DL + Sbjct: 95 FRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGNKCDLTTK 153 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRYG 184 + V A+ + + +LE SAK V + F T A ++KR G Sbjct: 154 KVVDYTTAKEFADSL-------------GIPFLETSAKNATNVEQSFMTMA-AEIKKRMG 199 >1YZU-A nrPDB Length = 170 Score = 90.1 bits (222), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 91/167 (54%), Gaps = 16/167 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 K+V++G+G GKT L++ + +++F + ++ T+ +++ + + GK+V LA+WDTAGQE Sbjct: 8 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQER 67 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN-VPIILVANKKDLRSD 124 + L P+ Y D++ ++ + + DS + + + WV E++ N + + +V NK DL + Sbjct: 68 FHALGPIYYRDSNGAILVYDITDEDSFQKV-KNWVKELRKMLGNEICLCIVGNKIDLEKE 126 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 HV + A E V + SAK +G+ E+F Sbjct: 127 RHVSIQEAESYAESV-------------GAKHYHTSAKQNKGIEELF 160 >1Z0A-A nrPDB Length = 174 Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 16/167 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 K +++GD GK+CLL+ F+ F V+ T+ + A I +DGKQ++L +WDTAGQE Sbjct: 12 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 71 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSD 124 + + Y L+ + + D+ ++ W+ + + H N+ I+L+ NK DL S Sbjct: 72 FRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHSNSNMVIMLIGNKSDLESR 130 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 V+ E +G A A R ++E SAKT V E F Sbjct: 131 REVKKE------------EGEAFA-REHGLIFMETSAKTASNVEEAF 164 >2F9L-A nrPDB Length = 199 Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 16/169 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 K+V++GD GK+ LL F+++EF T+ E I+VDGK ++ +WDTAGQE Sbjct: 7 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 66 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSD 124 Y R+ Y L+ + + + EN+ E+W+ E++ H N+ I+LV NK DLR Sbjct: 67 YRRITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR-- 123 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFET 173 H+R V TD+ RA A + ++E SA V E F+ Sbjct: 124 -HLR---------AVPTDEARAFAEK-NNLSFIETSALDSTNVEEAFKN 161 >3CPH-A nrPDB Length = 213 Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 17/177 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 K++++GD GK+CLL+ F +D+F ++ T+ ++ + ++++GK+V+L LWDTAGQE Sbjct: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSD 124 + + Y I++ + V + NI + W V +H ++LV NK D Sbjct: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLVGNKSD---- 136 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 M+ V D G A+A + ++E SAK + V E+F T + +K Sbjct: 137 ---------METRVVTADQGEALAKEL-GIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 >2OCY-C nrPDB Length = 170 Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 17/177 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 K++++GD GK+CLL+ F +D+F ++ T+ ++ + ++++GK+V+L LWDTAGQE Sbjct: 5 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 64 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSD 124 + + Y I++ + V + NI + W V +H ++LV NK D Sbjct: 65 FRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLVGNKSD---- 119 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 M+ V D G A+A + ++E SAK + V E+F T + +K Sbjct: 120 ---------METRVVTADQGEALAKEL-GIPFIESSAKNDDNVNEIFFTLAKLIQEK 166 >2WWX-A nrPDB Length = 175 Score = 87.4 bits (215), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 17/180 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ + IE+DGK ++L +WDTAGQE Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP-NVPIILVANKKDLRSD 124 + + Y I++ + V +S N+ ++W+ E+ + NV +LV K DL + Sbjct: 70 FRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGIKCDLTTK 128 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRYG 184 + V A+ + + +LE SAK V + F T A ++KR G Sbjct: 129 KVVDYTTAKEFADSL-------------GIPFLETSAKNATNVEQSFMTMA-AEIKKRMG 174 >4LHX-A nrPDB Length = 186 Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 16/172 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++GD GKTC+L FS+D F ++ T+ ++ + IE+DGK+++L +WDTAGQE Sbjct: 12 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 71 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSD 124 + + Y I++ + + + S +NI W+ + +H +V +++ NK D+ Sbjct: 72 FRTITTAYYRGAMGIMLVYDITNEKSFDNI-RNWIRNIEEHASADVEKMILGNKCDVNDK 130 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 V E + E + D G ++E SAK V F T R Sbjct: 131 RQVSKE----RGEKLALDYG---------IKFMETSAKANINVENAFFTLAR 169 >2KE5-A nrPDB Length = 174 Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 55/167 (32%), Positives = 84/167 (50%), Gaps = 15/167 (8%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K+++VG G GK+ L + F DEF E Y PT ++Y + +DG++V++ + DTAG EDY Sbjct: 5 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 64 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWVPEVKHFCPNVPIILVANKKDLRSD 124 +R + + L+ FS+ +S E + + VK +P+++V NK DL Sbjct: 65 AAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEER 124 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 V E AR K E Y+E SAKT+ V +VF Sbjct: 125 RQVPVEEARSKAEE-------------WGVQYVETSAKTRANVDKVF 158 >5SZI-A nrPDB Length = 209 Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 16/172 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++GD GKTC+L FS+D F ++ T+ ++ + IE+DGK+++L +WDTAGQE Sbjct: 12 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 71 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSD 124 + + Y I++ + + + S +NI W+ + +H +V +++ NK D+ Sbjct: 72 FRTITTAYYRGAMGIMLVYDITNEKSFDNI-RNWIRNIEEHASADVEKMILGNKCDVNDK 130 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 V E + E + D G ++E SAK V F T R Sbjct: 131 RQVSKE----RGEKLALDYG---------IKFMETSAKANINVENAFFTLAR 169 >6O62-A nrPDB Length = 184 Score = 86.7 bits (213), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 88/167 (52%), Gaps = 16/167 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL++VGD GK+CLL+ F +D+F ++ T+ ++ + IE GK+++L +WDTAGQE Sbjct: 16 KLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQER 75 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSD 124 + + Y I++ + V S EN+ E W V +H + I LV NK D D Sbjct: 76 FRTITTAYYRGAMGIVLIYDVTDSRSFENV-ENWFQTVTQHANEDAQIFLVGNKCD---D 131 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 E R V + G+ +A ++ +LE SAK+ E V +F Sbjct: 132 EVNR---------QVSKEQGQELAAKLNV-PFLEASAKSNENVDSIF 168 >4G01-B nrPDB Length = 181 Score = 86.7 bits (213), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 16/171 (9%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTA 61 +I KLV++GD GK+ L++ F KD+F E T+ + + + V+ V+ +WDTA Sbjct: 10 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 69 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKD 120 GQE Y L P+ Y ++ F V + S E +KWV E++ PN+ + L NK D Sbjct: 70 GQERYHSLAPMYYRGAAAAIIVFDVTNQASFER-AKKWVQELQAQGNPNMVMALAGNKSD 128 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 L V E A+ + ++G ++E SAKT V+E+F Sbjct: 129 LLDARKVTAEDAQTYAQ----ENG---------LFFMETSAKTATNVKEIF 166 >5FBL-B nrPDB Length = 221 Score = 86.3 bits (212), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 57/169 (33%), Positives = 87/169 (51%), Gaps = 16/169 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 K+V++GD GK+ LL F+++EF T+ E I+VDGK ++ +WDTAGQE Sbjct: 18 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 77 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSD 124 Y + Y L+ + + + EN+ E+W+ E++ H N+ I+LV NK DLR Sbjct: 78 YRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR-- 134 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFET 173 H+R V TD+ RA A + ++E SA V F+T Sbjct: 135 -HLR---------AVPTDEARAFAEK-NGLSFIETSALDSTNVEAAFQT 172 >2OCB-A nrPDB Length = 180 Score = 86.3 bits (212), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 86/179 (48%), Gaps = 20/179 (11%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65 K++++GDG GK+ L+ + ++F T+ ++ D+EVDG+ V L +WDTAGQE Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQER 68 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-----PNVPIILVANKKD 120 + LR Y D L+ FSVD S EN+ W E ++ + P +++ NK D Sbjct: 69 FKSLRTPFYRGADCCLLTFSVDDRQSFENLG-NWQKEFIYYADVKDPEHFPFVVLGNKVD 127 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 + D V TE A + + Y YLE SAK V FE A R L Sbjct: 128 -KEDRQVTTEEA------------QTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVL 173 >2A5J-A nrPDB Length = 191 Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 16/167 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 K +++GD GK+CLL+ F+ F V+ T+ + A + +DGKQ++L +WDTAGQE Sbjct: 23 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQES 82 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSD 124 + + Y L+ + + ++ ++ W+ + + H N+ I+L+ NK DL S Sbjct: 83 FRSITRSYYRGAAGALLVYDITRRETFNHLT-SWLEDARQHSSSNMVIMLIGNKSDLES- 140 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 + V+ ++G A A R ++E SAKT V E F Sbjct: 141 -----------RRDVKREEGEAFA-REHGLIFMETSAKTACNVEEAF 175 >6IF2-B nrPDB Length = 186 Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 92/177 (51%), Gaps = 15/177 (8%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++GD GK+ LL+ F+ + F Y+ T+ ++ + +E++G++V+L +WDTAG E Sbjct: 16 KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGLER 75 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDE 125 + + Y T +++ + V S +S N+ ++W+ E+ C +V ILV NK D Sbjct: 76 FRTITSTYYRGTHGVIVVYDVTSAESFVNV-KRWLHEINQNCDDVCRILVGNKND----- 129 Query: 126 HVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 182 +++ V T+D A ++ E SAK V E+F T L+ + Sbjct: 130 -------DPERKVVETEDAYKFAGQM-GIQLFETSAKENVNVEEMFNCITELVLRAK 178 >5YOZ-A nrPDB Length = 177 Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 15/173 (8%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWD 59 M A K+V++G+ GK+ + + F+++EF T+ +++ + +DG+ ++ +WD Sbjct: 11 MEATSAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWD 70 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANK 118 TAG E + L P+ Y L+ + + + +SL+ + W+ E++ P++ I+LV NK Sbjct: 71 TAGLERFRSLAPIYYRGASGALVVYDITNSESLKK-AQTWIKELRANADPSLIIVLVGNK 129 Query: 119 KDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 KDL S V E DG+ +A Q + E SAK V +VF Sbjct: 130 KDLGSLRQVSFE------------DGQRLAAEEQLAAFYEASAKDNNNVEQVF 170 >1WMS-A nrPDB Length = 177 Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/179 (33%), Positives = 89/179 (49%), Gaps = 20/179 (11%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQED 65 K++++GDG GK+ L+ + ++F T+ ++ D+EVDG V + +WDTAGQE Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQER 68 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-----PNVPIILVANKKD 120 + LR Y +D L+ FSVD S +N+ W E ++ + P +++ NK D Sbjct: 69 FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESFPFVILGNKID 127 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 + S+ V TE A Q R D+G Y Y E SAK V FE A R L Sbjct: 128 I-SERQVSTEEA---QAWCR-DNGD--------YPYFETSAKDATNVAAAFEEAVRRVL 173 >4QXA-A nrPDB Length = 208 Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 20/179 (11%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQED 65 K++++GDG GK+ L+ + ++F T+ ++ D+EVDG V + +WDTAG E Sbjct: 10 KIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGLER 69 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-----PNVPIILVANKKD 120 + LR Y +D L+ FSVD S +N+ W E ++ + P +++ NK D Sbjct: 70 FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESFPFVILGNKTD 128 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 + K+ V T++ +A Y Y E SAK V FE A R L Sbjct: 129 I-------------KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRIL 174 >4FMC-F nrPDB Length = 117 Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 41/118 (34%), Positives = 70/118 (59%), Gaps = 3/118 (2%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDY 66 L+++GD GK+CLL+ F+ D + E Y+ T+ ++ + IE+DGK ++L +WDTAGQE + Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP-NVPIILVANKKDLRS 123 + Y I++ + V +S N+ + W+ E+ + NV +LV NK DL + Sbjct: 61 RTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGNKCDLTT 117 >4UJ4-A nrPDB Length = 185 Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 16/169 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 K+V++GD GK+ LL F+++EF T+ E I+VDGK ++ +WDTAG E Sbjct: 12 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLER 71 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSD 124 Y + Y L+ + + + EN+ E+W+ E++ H N+ I+LV NK DLR Sbjct: 72 YRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR-- 128 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFET 173 H+R V TD+ RA A + ++E SA V F+T Sbjct: 129 -HLR---------AVPTDEARAFAEK-NGLSFIETSALDSTNVEAAFQT 166 >1ZC4-A nrPDB Length = 175 Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 55/167 (32%), Positives = 84/167 (50%), Gaps = 16/167 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K+++VG G GK+ L + F DEF E Y PT ++Y + +DG++V++ + DTAG EDY Sbjct: 8 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 67 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWVPEVKHFCPNVPIILVANKKDLRSD 124 +R + + L FS+ +S + + + VK NVP +LV NK DL Sbjct: 68 AAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKE-DENVPFLLVGNKSDLEDK 126 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 V E A+ + E +Y+E SAKT+ V +VF Sbjct: 127 RQVSVEEAKNRAEQWNV-------------NYVETSAKTRANVDKVF 160 >2G6B-A nrPDB Length = 180 Score = 84.0 bits (206), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 22/181 (12%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEF-PEVYVPTV---FENYVADIEVDGKQVELALWDTAG 62 K+++VGD GKTCLL+ F F ++ TV F N V D VDG +V+L +WDTAG Sbjct: 12 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLD--VDGVKVKLQMWDTAG 69 Query: 63 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN-VPIILVANKKDL 121 QE + + Y D +L+ + V + S +NI + W+ E+ + + V ++L+ NK D Sbjct: 70 QERFRSVTHAYYRDAHALLLLYDVTNKASFDNI-QAWLTEIHEYAQHDVALMLLGNKVD- 127 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 H R V+ +DG +A + ++E SAKT V F TA L++ Sbjct: 128 --SAHERV---------VKREDGEKLA-KEYGLPFMETSAKTGLNVDLAF-TAIAKELKR 174 Query: 182 R 182 R Sbjct: 175 R 175 >5LPN-A nrPDB Length = 177 Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 16/177 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++GD GKTC+L FS D F ++ T+ ++ + +E+ GK+++L +WDTAGQE Sbjct: 13 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 72 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSD 124 + + Y I++ + + + S ENI KW+ + +H +V +L+ NK D+ D Sbjct: 73 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDM-DD 130 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 + V + + K E + R +R + E SAK + + F T L+K Sbjct: 131 KRV---VPKGKGEQI----AREHGIR-----FFETSAKANINIEKAFLTLAEDILRK 175 >5SZJ-A nrPDB Length = 202 Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 16/177 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++GD GKTC+L FS D F ++ T+ ++ + +E+ GK+++L +WDTAGQE Sbjct: 13 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 72 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSD 124 + + Y I++ + + + S ENI KW+ + +H +V +L+ NK D+ D Sbjct: 73 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDM-DD 130 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 + V + + K E + R +R + E SAK + + F T L+K Sbjct: 131 KRV---VPKGKGEQI----AREHGIR-----FFETSAKANINIEKAFLTLAEDILRK 175 >2EW1-A nrPDB Length = 201 Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 20/188 (10%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 K+V++G+ GKTCL+ F++ FP T+ ++ + +E++G++V+L +WDTAGQE Sbjct: 28 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQER 87 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN-VPIILVANKKDLRSD 124 + + Y + +++ + + +S +PE W+ E++ + N V +LV NK DL Sbjct: 88 FRSITQSYYRSANALILTYDITCEESFRCLPE-WLREIEQYASNKVITVLVGNKIDLAER 146 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF-ETATRAALQKRY 183 V + A E Q YLE SAK + V ++F + A R + R Sbjct: 147 REVSQQRAEEFSEA-------------QDMYYLETSAKESDNVEKLFLDLACRLISEAR- 192 Query: 184 GSQNGCIN 191 QN +N Sbjct: 193 --QNTLVN 198 >4RKE-A nrPDB Length = 176 Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 16/167 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 K +++GD GK+CLL+ F+ F V+ T+ + A I +DGKQ++L +WDTAG E Sbjct: 12 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGLEA 71 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSD 124 + + Y L+ + + ++ ++ W+ + + H N+ I+L+ NK DL S Sbjct: 72 FRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHSNSNMVIMLIGNKSDLDSR 130 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 V+ E +G A A R ++E SA+T V E F Sbjct: 131 REVKKE------------EGEAFA-REHGLVFMETSARTAANVEEAF 164 >5CM8-B nrPDB Length = 203 Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 16/167 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K+++VG G GK+ L + F DEF E Y PT ++Y + +DG++V++ + DTAGQEDY Sbjct: 15 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDY 74 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWVPEVKHFCPNVPIILVANKKDLRSD 124 +R + + L FS+ +S + E + + VK+ ++P +LV NK DL Sbjct: 75 AAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKN-DESIPFLLVGNKCDLNDK 133 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 V +++ + A Y+E SAKT+E V +VF Sbjct: 134 RKVPLSECQLRAQQ-------------WAVPYVETSAKTRENVDKVF 167 >3CUE-F nrPDB Length = 206 Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 87/172 (50%), Gaps = 16/172 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++G+ GK+CLL+ FS D + Y+ T+ ++ + +E+DGK V+L +WDTAGQE Sbjct: 10 KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQER 69 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPI-ILVANKKDLRSD 124 + + Y + I++ + V +S + + W+ E+ + + + +LV NK DL+ Sbjct: 70 FRTITSSYYRGSHGIIIVYDVTDQESFNGV-KMWLQEIDRYATSTVLKLLVGNKCDLKDK 128 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 V ++A+ D M +LE SA V + F T R Sbjct: 129 RVVEYDVAK------EFADANKMP-------FLETSALDSTNVEDAFLTMAR 167 >1X3S-A nrPDB Length = 195 Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 87/177 (49%), Gaps = 18/177 (10%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEF-PEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K++++G+ GK+ LL+ F+ D F PE+ + V I VDG + +LA+WDTAGQE Sbjct: 17 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQER 76 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPII--LVANKKDLRS 123 + L P Y +++ + V D+ + + W+ E++ +C I+ LV NK D + Sbjct: 77 FRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKEN 135 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 E R E + R + ++E SAKT +GV+ FE +Q Sbjct: 136 REVDRNEGLKF--------------ARKHSMLFIEASAKTCDGVQCAFEELVEKIIQ 178 >4M8N-E nrPDB Length = 199 Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 15/172 (8%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 KLVV+G G GK+ L + F + F E Y PT+ ++Y +EVD +Q L + DTAG E + Sbjct: 8 KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQF 67 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWVPEVKHFCPNVPIILVANKKDLRSD 124 +R L + + +S+ + + ++ + + + VK +VP+ILV NK DL D Sbjct: 68 TAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TDDVPMILVGNKCDLE-D 125 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 E V V + G+ +A + +LE SAK+K V E+F R Sbjct: 126 ERV-----------VGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVR 166 >1YZN-A nrPDB Length = 185 Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 87/172 (50%), Gaps = 16/172 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++G+ GK+CLL+ FS D + Y+ T+ ++ + +E+DGK V+L +WDTAGQE Sbjct: 23 KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQER 82 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPI-ILVANKKDLRSD 124 + + Y + I++ + V +S + + W+ E+ + + + +LV NK DL+ Sbjct: 83 FRTITSSYYRGSHGIIIVYDVTDQESFNGV-KMWLQEIDRYATSTVLKLLVGNKCDLKDK 141 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 V ++A+ D M +LE SA V + F T R Sbjct: 142 RVVEYDVAK------EFADANKMP-------FLETSALDSTNVEDAFLTMAR 180 >3DZ8-A nrPDB Length = 191 Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 16/168 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++G+ + GKT L ++ D F +V TV ++ V + K+V+L +WDTAGQE Sbjct: 25 KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQER 84 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRSD 124 Y + Y ++ + + + +S N + W ++K + N +ILV NK D+ + Sbjct: 85 YRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCDMEEE 143 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFE 172 V TE ++ E + +D+ E SAK VR+ FE Sbjct: 144 RVVPTEKGQLLAEQL-------------GFDFFEASAKENISVRQAFE 178 >4KYI-B nrPDB Length = 170 Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 16/167 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 KLV++G+ A GK+ L++ F K +F E T+ ++ + +D V+ +WDTAG E Sbjct: 11 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLER 70 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSD 124 Y L P+ Y ++ + + + D+ + WV E+ + PN+ I L NK DL S Sbjct: 71 YHSLAPMYYRGAQAAIVVYDITNTDTFAR-AKNWVKELQRQASPNIVIALAGNKADLASK 129 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 V ++ DD + ++E SAKT V E+F Sbjct: 130 RAV-----EFQEAQAYADDNSLL--------FMETSAKTAMNVNEIF 163 >1Z22-A nrPDB Length = 168 Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 15/176 (8%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65 K+VVVG+GA GK+ ++ + K F + Y T+ +++ I+V+ + V L LWDTAGQE+ Sbjct: 7 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEE 66 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDE 125 +D + Y ++ FS +S E I W +V ++P LV NK DL D Sbjct: 67 FDAITKAYYRGAQACVLVFSTTDRESFEAISS-WREKVVAEVGDIPTALVQNKIDLLDDS 125 Query: 126 HVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 ++ E A +G A ++++ Y S K V EVF+ LQK Sbjct: 126 CIKNEEA----------EGLAKRLKLRFY---RTSVKEDLNVSEVFKYLAEKHLQK 168 >5XR6-A nrPDB Length = 194 Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 55/167 (32%), Positives = 84/167 (50%), Gaps = 16/167 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 KLV++GD GK+ LL F+K+EF T+ E +V+GK V+ +WDTAGQE Sbjct: 27 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQER 86 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSD 124 Y + Y L+ + V + EN +W+ E++ H PN+ ++L+ NK DLR Sbjct: 87 YRAITSAYYRGAVGALLIYDVTRHATFEN-AARWLRELRGHTDPNIVVMLIGNKCDLR-- 143 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 H+ V+T++ +A A R Y ++E SA V F Sbjct: 144 -HL---------VAVKTEEAKAFAERESLY-FMETSALDATNVENAF 179 >2GF9-A nrPDB Length = 189 Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/168 (30%), Positives = 87/168 (51%), Gaps = 16/168 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++G+ + GKT L ++ D F +V TV ++ V + K+++L +WDTAGQE Sbjct: 24 KLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQER 83 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRSD 124 Y + Y L+ + + + +S + + W ++K + N +ILV NK DL D Sbjct: 84 YRTITTAYYRGAMGFLLMYDIANQESFAAVQD-WATQIKTYSWDNAQVILVGNKCDL-ED 141 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFE 172 E V V +DGR +A + +++ E SAK V++VFE Sbjct: 142 ERV-----------VPAEDGRRLADDL-GFEFFEASAKENINVKQVFE 177 >1TU4-A nrPDB Length = 171 Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 16/167 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 KLV++G+ A GK+ L++ F K +F E T+ ++ + +D V+ +WDTAGQE Sbjct: 9 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 68 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSD 124 Y L P+ Y ++ + + + +S + WV E+ + PN+ I L NK DL + Sbjct: 69 YHSLAPMYYRGAQAAIVVYDITNEESFAR-AKNWVKELQRQASPNIVIALSGNKADLANK 127 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 V + A+ DD + ++E SAKT V E+F Sbjct: 128 RAVDFQEAQ-----SYADDNSLL--------FMETSAKTSMNVNEIF 161 >2FFQ-A nrPDB Length = 171 Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 16/176 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 KLV +G+ + GKT L+ F D F Y T+ ++++ + ++ + V L LWDTAGQE Sbjct: 4 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 63 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSD 124 + L P D+ V ++ + + + +S + KW+ +V+ +V I+LV NK Sbjct: 64 FRSLIPSYIRDSTVAVVVYDITNLNSFQQ-TSKWIDDVRTERGSDVIIMLVGNK------ 116 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 T+LA +Q + + RA + + ++E SAKT V+++F A L+ Sbjct: 117 ----TDLADKRQITIEEGEQRAKELSVM---FIETSAKTGYNVKQLFRRVASALLE 165 >1EK0-A nrPDB Length = 170 Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 13/167 (7%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 KLV++G+ A GK+ +++ F ++F E PT+ ++ + ++ V+ +WDTAGQE Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 64 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSD 124 + L P+ Y + L+ + V P S WV E+ + ++ I LV NK D+ + Sbjct: 65 FASLAPMYYRNAQAALVVYDVTKPQSFIK-ARHWVKELHEQASKDIIIALVGNKIDMLQE 123 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 R ++AR + E + + G + E SAKT E V +VF Sbjct: 124 GGER-KVAREEGEKLAEEKGLL---------FFETSAKTGENVNDVF 160 >4DXA-A nrPDB Length = 169 Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 55/172 (31%), Positives = 87/172 (50%), Gaps = 15/172 (8%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 KLVV+G GK+ L + F + F E Y PT+ ++Y +EVD +Q L + DTAG E + Sbjct: 7 KLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQF 66 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWVPEVKHFCPNVPIILVANKKDLRSD 124 +R L + + +S+ + + ++ + + + VK +VP+ILV NK DL D Sbjct: 67 TAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKD-TDDVPMILVGNKCDL-ED 124 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 E V V + G+ +A + +LE SAK+K V E+F R Sbjct: 125 ERV-----------VGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVR 165 >3RAB-A nrPDB Length = 169 Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 87/168 (51%), Gaps = 16/168 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 K++++G+ + GKT L ++ D F +V TV ++ V I + K+++L +WDTAGQE Sbjct: 7 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQER 66 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRSD 124 Y + Y ++ + + + +S N + W ++K + N ++LV NK D+ D Sbjct: 67 YRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCDME-D 124 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFE 172 E V V ++ GR +A + +++ E SAK V++ FE Sbjct: 125 ERV-----------VSSERGRQLADHL-GFEFFEASAKDNINVKQTFE 160 >4RKF-A nrPDB Length = 190 Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 16/168 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL+++G+ + GKT L ++ D F +V TV ++ V + K+V+L +WDTAG E Sbjct: 25 KLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGLER 84 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRSD 124 Y + Y ++ + V + DS ++ + WV ++K + N +ILV NK D+ Sbjct: 85 YRTITTAYYRGAMGFILMYDVTNEDSFNSVQD-WVTQIKTYSWDNAQVILVGNKCDMED- 142 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFE 172 Q + + GR +A ++ ++ E SAK V+ VFE Sbjct: 143 -----------QRVISFERGRQLADQL-GVEFFETSAKENVNVKAVFE 178 >2BMD-A nrPDB Length = 186 Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 82/178 (46%), Gaps = 18/178 (10%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADI-EVDGKQVELALWDTAGQED 65 K +V+G+ GK+CLL F + +F + T+ + + I V GK V+L +WDTAGQE Sbjct: 12 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQER 71 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP-NVPIILVANKKDLRSD 124 + + Y L+ + + S ++ N W+ + + N+ IIL NKKDL +D Sbjct: 72 FRSVTRSYYRGAAGALLVYDITSRETY-NALTNWLTDARMLASQNIVIILCGNKKDLDAD 130 Query: 125 EHVR-TELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 V E +R QE +LE SA T E V E F R L K Sbjct: 131 REVTFLEASRFAQE--------------NELMFLETSALTGENVEEAFVQCARKILNK 174 >5UB8-A nrPDB Length = 222 Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 6/124 (4%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 K+V++GD GK+ LL F++DEF T+ E +E+DGK+V+ +WDTAGQE Sbjct: 17 KIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQER 76 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSD 124 Y + Y L+ + + +S E++ +W+ E+K H N+ I LV NK DL Sbjct: 77 YRAITSAYYRGAVGALIVYDIAKTESYESVS-RWLKELKEHADANIIIELVGNKSDL--- 132 Query: 125 EHVR 128 +H+R Sbjct: 133 DHLR 136 >1Z06-A nrPDB Length = 189 Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 75/131 (57%), Gaps = 5/131 (3%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 K++V+GD GKTCL F FP+ T+ ++ +++DG+++++ LWDTAGQE Sbjct: 22 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQER 81 Query: 66 YDR-LRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPN-VPIILVANKKDLR 122 + + + Y + ++ + + + S ++P W+ E K H N +P ILV NK DLR Sbjct: 82 FRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPA-WIEECKQHLLANDIPRILVGNKCDLR 140 Query: 123 SDEHVRTELAR 133 S V T+LA+ Sbjct: 141 SAIQVPTDLAQ 151 >2G77-B nrPDB Length = 198 Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 75/131 (57%), Gaps = 5/131 (3%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 K++V+GD GKTCL F FP+ T+ ++ +++DG+++++ LWDTAGQE Sbjct: 31 KIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQER 90 Query: 66 YDR-LRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPN-VPIILVANKKDLR 122 + + + Y + ++ + + + S ++P W+ E K H N +P ILV NK DLR Sbjct: 91 FRKSMVQHYYRNVHAVVFVYDMTNMASFHSLP-AWIEECKQHLLANDIPRILVGNKCDLR 149 Query: 123 SDEHVRTELAR 133 S V T+LA+ Sbjct: 150 SAIQVPTDLAQ 160 >1Z0F-A nrPDB Length = 179 Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 22/180 (12%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEF----PEVYVPTVFENYVADIEVDGKQVELALWDTAG 62 K +++GD GK+CLL F++ +F P + F + IEV G++++L +WDTAG Sbjct: 17 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHT-IGVEFGTRI--IEVSGQKIKLQIWDTAG 73 Query: 63 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDL 121 QE + + Y LM + + + S N W+ + ++ PN IIL+ NK DL Sbjct: 74 QERFRAVTRSYYRGAAGALMVYDI-TRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADL 132 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 + V E A+ E ++G +LE SAKT E V + F A + Q Sbjct: 133 EAQRDVTYEEAKQFAE----ENGLL---------FLEASAKTGENVEDAFLEAAKKIYQN 179 >2IL1-A nrPDB Length = 192 Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 15/172 (8%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDT 60 A + +++++G GKT L+ F+ D F E TV ++ + +E+ GK++ L +WDT Sbjct: 23 ADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDT 82 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKK 119 AGQE ++ + Y I++ + + ++ +++P KW+ + K+ + ++LV NK Sbjct: 83 AGQERFNSITSAYYRSAKGIILVYDITKKETFDDLP-KWMKMIDKYASEDAELLLVGNKL 141 Query: 120 DLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 D +D + + G A +I + E SAK V E+F Sbjct: 142 DCETDREITRQ------------QGEKFAQQITGMRFCEASAKDNFNVDEIF 181 >2HEI-A nrPDB Length = 179 Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 16/167 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65 KLV++G+ A GK+ L++ F K +F E T+ ++ + +D V+ +WDTAGQE Sbjct: 10 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 69 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSD 124 Y L P+ Y ++ + + + ++ + WV E+ + P++ I L NK DL + Sbjct: 70 YHSLAPMYYRGAQAAIVVYDITNQETFAR-AKTWVKELQRQASPSIVIALAGNKADLANK 128 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 V E A+ DD + ++E SAKT V ++F Sbjct: 129 RMVEYEEAQ-----AYADDNSLL--------FMETSAKTAMNVNDLF 162 >2HUP-A nrPDB Length = 201 Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 21/170 (12%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KLV+VGD + GKTC++ F F E T+ ++ + +E+ GK+V+L +WDTAGQE Sbjct: 31 KLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQER 90 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRSD 124 + + Y + ++ + + S ++P W+ +V+ + N+ +L+ NK DL Sbjct: 91 FRTITQSYYRSANGAILAYDITKRSSFLSVPH-WIEDVRKYAGSNIVQLLIGNKSDL--- 146 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYL---ECSAKTKEGVREVF 171 +EL V + +++A + YD L E SAK V E F Sbjct: 147 ----SEL-----REVSLAEAQSLA---EHYDILCAIETSAKDSSNVEEAF 184 >2O52-A nrPDB Length = 200 Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 18/178 (10%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADI-EVDGKQVELALWDTAGQED 65 K +V+G GK+CLL F +++F + T+ + + + V GK V+L +WDTAGQE Sbjct: 27 KFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQER 86 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRSD 124 + + Y L+ + + S ++ ++ W+ + + PN+ +IL NKKDL + Sbjct: 87 FRSVTRSYYRGAAGALLVYDITSRETYNSLA-AWLTDARTLASPNIVVILCGNKKDLDPE 145 Query: 125 EHVR-TELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 V E +R QE +LE SA T E V E F R L K Sbjct: 146 REVTFLEASRFAQE--------------NELMFLETSALTGENVEEAFLKCARTILNK 189 >3CPJ-B nrPDB Length = 223 Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 16/177 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65 K+V++GD GK+ LL F+K+EF T+ + +E++GK+++ +WDTAGQE Sbjct: 15 KIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTAGQER 74 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRSD 124 Y + Y L+ + + S EN W+ E++ NV + L+ NK DL Sbjct: 75 YRAITSAYYRGAVGALIVYDISKSSSYENC-NHWLSELRENADDNVAVGLIGNKSDL--- 130 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 H+R V T++ + A Q + E SA E V + FE QK Sbjct: 131 AHLR---------AVPTEESKTFAQENQLL-FTETSALNSENVDKAFEELINTIYQK 177 >1ZBD-A nrPDB Length = 203 Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 16/168 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 K++++G+ + GKT L ++ D F +V TV ++ V I + K+++L +WDTAG E Sbjct: 10 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGLER 69 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRSD 124 Y + Y ++ + + + +S N + W ++K + N ++LV NK D+ D Sbjct: 70 YRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCDME-D 127 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFE 172 E V V ++ GR +A + +++ E SAK V++ FE Sbjct: 128 ERV-----------VSSERGRQLADHL-GFEFFEASAKDNINVKQTFE 163 >3BFK-A nrPDB Length = 181 Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 7/125 (5%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV-FENYVADIEV-DGKQVELALWDTAGQE 64 K+V++GD GK+ LL F++DEF T+ E I++ + K ++ +WDTAGQE Sbjct: 9 KIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQE 68 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRS 123 Y + Y L+ + + +S ENI EKW+ E++ N+ I+LV NK DL+ Sbjct: 69 RYRAITSAYYRGAVGALLVYDITKKNSFENI-EKWLKELRDNADSNIVILLVGNKSDLK- 126 Query: 124 DEHVR 128 H+R Sbjct: 127 --HLR 129 >2P5S-A nrPDB Length = 199 Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 12/162 (7%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 K+V+ GD A GK+ L+ K+EF E T+ ++ + + VDG++ L LWDTAGQE Sbjct: 30 KIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQER 89 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRSD 124 + + + D +L+ + V S NI E WV ++ VPI+LV NK D+R Sbjct: 90 FRSIAKSYFRKADGVLLLYDVTCEKSFLNIRE-WVDMIEDAAHETVPIMLVGNKADIRDT 148 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEG 166 A Q+ V G +A+ Y L C K+G Sbjct: 149 A------ATEGQKCVPGHFGEKLAM---TYGALFCETSAKDG 181 >2GIL-A nrPDB Length = 162 Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 16/167 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 KLV +G+ + GKT L+ F D F Y T+ ++++ + ++ + V L LWDTAGQE Sbjct: 3 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 62 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSD 124 + L P D+ V ++ + + + +S + KW+ +V+ +V I+LV NK Sbjct: 63 FRSLIPSYIRDSTVAVVVYDITNVNSFQQTT-KWIDDVRTERGSDVIIMLVGNK------ 115 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 T+LA +Q + + +A + + ++E SAK V+++F Sbjct: 116 ----TDLADKRQVSIEEGERKAKELNVM---FIETSAKAGYNVKQLF 155 >2ERX-A nrPDB Length = 172 Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 15/168 (8%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++ V G G GK+ L++ F K F E Y+PTV + Y I D L + DT G + Sbjct: 5 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQF 64 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKW--VPEVKHFCPNVPIILVANKKDLRSD 124 ++ LS ++ +S+ S SLE + + + E+K ++PI+LV NK D Sbjct: 65 PAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCD---- 120 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFE 172 V++ + A+A R ++E SAK V+E+F+ Sbjct: 121 --------ESPSREVQSSEAEALA-RTWKCAFMETSAKLNHNVKELFQ 159 >3T5G-A nrPDB Length = 181 Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 20/170 (11%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 +K+ ++G + GK+ L I F + +F + Y PT+ + I V+G++ L L DTAGQ++ Sbjct: 7 RKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDE 66 Query: 66 YDRLRPLSYP-DTDVILMCFSVDSPDSLENIP---EKWVPEVKHFCPNVPIILVANKKDL 121 Y + P +Y D + ++ +SV S S E I K + V +PI+LV NKKDL Sbjct: 67 YS-IFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKV--QIPIMLVGNKKDL 123 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 + + E +G+A+A A +LE SAK + +VF Sbjct: 124 HMERVISYE------------EGKALAESWNA-AFLESSAKENQTAVDVF 160 >2N1B-A nrPDB Length = 261 Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 4 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV-FENYVADIEVDGKQVELALWDTAG 62 ++ KLV+VGDG GKT + EF + YV T+ E + + ++ +WDTAG Sbjct: 50 VQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAG 109 Query: 63 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLR 122 QE + LR Y ++ F V S + +N+P W ++ C N+PI+L NK D++ Sbjct: 110 QEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCENIPIVLCGNKVDIK 168 >5WDQ-A nrPDB Length = 170 Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 17/165 (10%) Query: 18 KTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I ++ F + Y PT+ ++Y + +DG+ L + DTAGQE+Y +R Sbjct: 20 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 79 Query: 78 DVILMCFSVDSPDSLENIPE--KWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMK 135 + L F++++ S E+I + + + VK +VP++LV NK D RT +R Sbjct: 80 EGFLCVFAINNTKSFEDIHQYREQIKRVKD-SDDVPMVLVGNK----CDAAARTVESRQA 134 Query: 136 QEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 Q+ R+ Y+E SAKT++GV + F T R Q Sbjct: 135 QDLARS----------YGIPYIETSAKTRQGVEDAFYTLVREIRQ 169 >5LEF-A nrPDB Length = 191 Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 86/167 (51%), Gaps = 16/167 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 KLV +G+ + GKT L+ F D F Y T+ ++++ + ++ + V L LWDTAG E Sbjct: 11 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGLER 70 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSD 124 + L P D+ V ++ + + + +S + KW+ +V+ +V I+LV NK Sbjct: 71 FRSLIPSYIRDSTVAVVVYDITNVNSFQQTT-KWIDDVRTERGSDVIIMLVGNK------ 123 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 T+LA +Q + + +A + + ++E SAK V+++F Sbjct: 124 ----TDLADKRQVSIEEGERKAKELNVM---FIETSAKAGYNVKQLF 163 >3CON-A nrPDB Length = 190 Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 21/174 (12%) Query: 18 KTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I ++ F + Y PT+ ++Y + +DG+ L + DTAGQE+Y +R Sbjct: 34 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 93 Query: 78 DVILMCFSVDSPDSLE--NIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMK 135 + L F++++ S N+ + + VK +VP++LV NK DL Sbjct: 94 EGFLCVFAINNSKSFADINLYREQIKRVKD-SDDVPMVLVGNKCDL-------------- 138 Query: 136 QEPVRTDDGRAMAVRIQAYD--YLECSAKTKEGVREVFETATRAALQKRYGSQN 187 P RT D + ++Y ++E SAKT++GV + F T R Q R N Sbjct: 139 --PTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLN 190 >5UWI-A nrPDB Length = 237 Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 4 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV-FENYVADIEVDGKQVELALWDTAG 62 ++ KLV+VGDG GKT + EF + YV T+ E + + ++ +WDTAG Sbjct: 30 VQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAG 89 Query: 63 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLR 122 QE + LR Y ++ F V S + +N+P W ++ C N+PI+L NK D++ Sbjct: 90 QEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCENIPIVLCGNKVDIK 148 >5CLL-A nrPDB Length = 191 Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 2/120 (1%) Query: 4 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV-FENYVADIEVDGKQVELALWDTAG 62 ++ KLV+VGDG GKT + EF + YV T+ E + + ++ +WDTAG Sbjct: 9 VQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAG 68 Query: 63 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLR 122 QE + LR Y ++ F V S + +N+P W ++ C N+PI+L NK D++ Sbjct: 69 QEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCENIPIVLCGNKVDIK 127 >5XOJ-A nrPDB Length = 182 Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 2/117 (1%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 KLV+VGDG GKT + EF + Y+ T+ E + + +++ +WDTAG E Sbjct: 14 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGLEK 73 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLR 122 + LR Y + ++ F V S + +N+P W ++ C N+PI+L NK D++ Sbjct: 74 FGGLRDGYYINAQCAIIMFDVTSRITYKNVPN-WHRDLVRVCENIPIVLCGNKVDVK 129 >5LDD-C nrPDB Length = 207 Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 16/180 (8%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65 K++++GD GKT L+ + +F Y T+ +++ ++ VD +QV + LWDTAGQE Sbjct: 12 KVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTAGQER 71 Query: 66 YDRLRPLSYPDTDVILMCFSVD---SPDSLENIPEKWVPEVKHFCP-NVPIILVANKKDL 121 + L Y D ++ F V+ S D+L++ ++++ + P N P +++ K D+ Sbjct: 72 FQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPENFPFVVLGIKIDV 131 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 + V + T + Y E SAK V E F+ R AL + Sbjct: 132 EESKRV-----------ISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNALMQ 180 >2FG5-A nrPDB Length = 192 Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 91/178 (51%), Gaps = 17/178 (9%) Query: 2 AAIRK-KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQV-ELALWD 59 +AIR+ K+ ++GD GK+ ++ F +D F PT+ +++ G ++ + +WD Sbjct: 19 SAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWD 78 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP-NVPIILVANK 118 TAGQE + L P+ Y + ++ + + DS + +KWV E+K P N+ + + NK Sbjct: 79 TAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTL-KKWVKELKEHGPENIVMAIAGNK 137 Query: 119 KDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 D L+ +++ P++ D + A I A +E SAK + E+F+ +R Sbjct: 138 CD----------LSDIREVPLK--DAKEYAESIGAI-VVETSAKNAINIEELFQGISR 182 >3RWM-B nrPDB Length = 185 Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 16/176 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 K+V++GD GK+ LL F+ DEF T+ E IEV+ K+++ +WDTAG E Sbjct: 12 KIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGLER 71 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRSD 124 Y + Y L+ + + S EN W+ E++ NV + L+ NK DL Sbjct: 72 YRAITSAYYRGAVGALIVYDISKSSSYENCNH-WLTELRENADDNVAVGLIGNKSDL--- 127 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 H+R V TD+ + A+ Q + E SA + V + F A Q Sbjct: 128 AHLR---------AVPTDEAKNFAMENQML-FTETSALNSDNVDKAFRELIVAIFQ 173 >3WYF-A nrPDB Length = 219 Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 2/117 (1%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 KLV+VGDG GKT + EF + Y+ T+ E + + +++ +WDTAG E Sbjct: 14 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGLEK 73 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLR 122 + LR Y + ++ F V S + +N+P W ++ C N+PI+L NK D++ Sbjct: 74 FGGLRDGYYINAQCAIIMFDVTSRITYKNVPN-WHRDLVRVCENIPIVLCGNKVDVK 129 >4KLZ-A nrPDB Length = 173 Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 16/177 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 KLV++G G GK+ + + F FPE + PT+ + Y I +D + L + DTAGQ ++ Sbjct: 7 KLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEF 66 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWVPEVKHFCPNVPIILVANKKDLRSD 124 +R + ++C+S+ S + E + + V+ + P++LV NK DL+ Sbjct: 67 TAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRR-TDDTPVVLVGNKSDLK-- 123 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 +++Q V ++G A+A R + + E SA + + +VF R +K Sbjct: 124 --------QLRQ--VTKEEGLALA-REFSCPFFETSAAYRYYIDDVFHALVREIRRK 169 >5UHV-A nrPDB Length = 166 Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 21/167 (12%) Query: 18 KTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I ++ F + Y PT+ ++Y + +DG+ L + DTAGQE+Y +R Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 75 Query: 78 DVILMCFSVDSPDSLE--NIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMK 135 + L F++++ S N+ + + VK +VP++LV NK DL Sbjct: 76 EGFLCVFAINNSKSFADINLYREQIKRVKD-SDDVPMVLVGNKCDL-------------- 120 Query: 136 QEPVRTDDGRAMAVRIQAYD--YLECSAKTKEGVREVFETATRAALQ 180 P RT D + ++Y ++E SAKT++GV + F T R Q Sbjct: 121 --PTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQ 165 >1D5C-A nrPDB Length = 162 Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 17/173 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 KLV +G+ A GKT ++ F D F Y T+ ++++ + +D V L LWDTAGQE Sbjct: 3 KLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQER 62 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSD 124 + L P D+ ++ + + + S EN KW+ ++ +V I LV NK DL Sbjct: 63 FRSLIPSYIRDSAAAIVVYDITNRQSFENTT-KWIQDILNERGKDVIIALVGNKTDLGDL 121 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF-ETATR 176 V E K + T + E SAK ++ +F +TA++ Sbjct: 122 RKVTYEEGMQKAQEYNT-------------MFHETSAKAGHNIKVLFKKTASK 161 >4KU4-A nrPDB Length = 206 Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 36/202 (17%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 I K+ ++G+G GKT L + +K F E Y PT+ ++Y +DG L + DTA Sbjct: 11 GKITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCVIDGIPSHLEILDTA 70 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-----------KH----- 105 GQE+Y LR ++ ++ F V S E E+ EV +H Sbjct: 71 GQEEYGALREQWIRQNELFVIVFDVTRRSSFE-AAERLFEEVIQTKRKLDETRRHPGDRH 129 Query: 106 -----FCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECS 160 F P++ ++LV NK DL + + V T +G ++A ++ ++E S Sbjct: 130 PDDLPFAPSL-VVLVGNKCDLDT------------RREVGTLEGSSLAKKL-GCGFVETS 175 Query: 161 AKTKEGVREVFETATRAALQKR 182 AK V E F + RA +++ Sbjct: 176 AKLGTNVEEAFFSVVRADRRRK 197 >2F7S-A nrPDB Length = 217 Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 75/180 (41%), Gaps = 27/180 (15%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV---------FENYVADIEVDGK--QVEL 55 KL+ +GD GKT L ++ ++F ++ TV N GK +V L Sbjct: 27 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 86 Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK--HFCPNVPII 113 LWDTAGQE + L + D L+ F + S S N+ W+ +++ +C N I+ Sbjct: 87 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIV 145 Query: 114 LVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFET 173 L+ NK DL V AR + Y E SA T + V + ET Sbjct: 146 LIGNKADLPDQREVNERQARELADKY-------------GIPYFETSAATGQNVEKAVET 192 >2IEY-A nrPDB Length = 195 Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 27/180 (15%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-----VADIE-VDGK-----QVEL 55 KL+ +GD GKT L ++ ++F ++ TV ++ V D + DG +V L Sbjct: 13 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHL 72 Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK--HFCPNVPII 113 LWDTAG E + L + D L+ F + S S N+ W+ +++ +C N I+ Sbjct: 73 QLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIV 131 Query: 114 LVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFET 173 L+ NK DL V AR E Y E SA T + V + ET Sbjct: 132 LIGNKADLPDQREVNERQARELAEKY-------------GIPYFETSAATGQNVEKSVET 178 >2IEZ-A nrPDB Length = 220 Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 27/180 (15%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-----VADIE-VDGK-----QVEL 55 KL+ +GD GKT L ++ ++F ++ TV ++ V D + DG +V L Sbjct: 13 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHL 72 Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK--HFCPNVPII 113 LWDTAG E + L + D L+ F + S S N+ W+ +++ +C N I+ Sbjct: 73 QLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIV 131 Query: 114 LVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFET 173 L+ NK DL V AR E Y E SA T + V + ET Sbjct: 132 LIGNKADLPDQREVNERQARELAEKY-------------GIPYFETSAATGQNVEKSVET 178 >4PHF-A nrPDB Length = 184 Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 19/183 (10%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVA-DIEVDGKQV-ELALWDTAGQE 64 K++++GD GKT L+ + D++ Y T+ +++ ++ VDG +V + +WDTAGQE Sbjct: 12 KVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQE 71 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPE-VKHFCPN----VPIILVANKK 119 + L Y D ++ + V + S ENI + W E + H N P +++ NK Sbjct: 72 RFQSLGVAFYRGADCCVLVYDVTNASSFENI-KSWRDEFLVHANVNSPETFPFVILGNKI 130 Query: 120 DLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 D + + +E + QE +A + SAK V FE R+AL Sbjct: 131 DAEESKKIVSE--KSAQE---------LAKSLGDIPLFLTSAKNAINVDTAFEEIARSAL 179 Query: 180 QKR 182 Q+ Sbjct: 180 QQN 182 >4WA7-A nrPDB Length = 170 Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 21/163 (12%) Query: 18 KTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I ++ F + Y PT+ ++Y + +DG+ L + DTAG E+Y +R Sbjct: 17 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGLEEYSAMRDQYMRTG 76 Query: 78 DVILMCFSVDSPDSLENIPEKWVPEVKHF--CPNVPIILVANKKDLRSDEHVRTELARMK 135 + L F++++ S E+I + ++K +VP++LV NK DL Sbjct: 77 EGFLCVFAINNTKSFEDI-HHYREQIKRVKDSEDVPMVLVGNKCDL-------------- 121 Query: 136 QEPVRTDDGRAMAVRIQAYD--YLECSAKTKEGVREVFETATR 176 P RT D + ++Y ++E SAKT++GV + F T R Sbjct: 122 --PSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVR 162 >6IYB-A nrPDB Length = 199 Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 21/181 (11%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65 K++++GD GKT L+ + +F Y T+ +++ ++ VD + V + +WDTAG E Sbjct: 15 KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGLER 74 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPE-VKHFCP----NVPIILVANKKD 120 + Y D ++ F V +P++ + + + W E + P N P +++ NK D Sbjct: 75 FQSGVAF-YRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKID 132 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 L + + V T +A Y E SAK V + F+T R AL+ Sbjct: 133 LENRQ-------------VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 179 Query: 181 K 181 + Sbjct: 180 Q 180 >5WDR-A nrPDB Length = 171 Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 61/178 (34%), Positives = 88/178 (49%), Gaps = 16/178 (8%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 MA +LVVVG G GK+ L I + F Y PT+ ++Y + +D + L + DT Sbjct: 3 MAMTEYRLVVVGTGGVGKSALTIQLIQQHFVTEYDPTIEDSYRKHVSIDDEACLLDILDT 62 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWVPEVKHFCPNVPIILVANK 118 AGQEDY +R + L +S+DS SL+ I + + VK VP+ILV NK Sbjct: 63 AGQEDYSAMRDQYMRTGEGFLCVYSIDSQQSLDEIHSFREQILRVKD-QDEVPMILVGNK 121 Query: 119 KDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 DL +EH V T+ G+A+A + + ++E SAK + V E F R Sbjct: 122 CDL--EEH----------REVSTEAGQAVA-KSYSIPFMETSAKKRINVEEAFYQLVR 166 >3TSO-A nrPDB Length = 178 Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 16/177 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 65 K+V++G+ GKT LL F+++EF T+ E + + V+ +WDTAG E Sbjct: 12 KVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLER 71 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSD 124 Y + Y L+ F + + + E+W+ E+ H + ++LV NK DL Sbjct: 72 YRAITSAYYRGAVGALLVFDLTKHQTYA-VVERWLKELYDHAEATIVVMLVGNKSDLSQA 130 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 V TE ARM E ++G +LE SA V FET + K Sbjct: 131 REVPTEEARMFAE----NNGLL---------FLETSALDSTNVELAFETVLKEIFAK 174 >3OES-A nrPDB Length = 201 Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 18/188 (9%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 +K+V++G GKT L F + EF E Y PTV Y + + + L L DTAGQ++ Sbjct: 25 RKVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYSKIVTLGKDEFHLHLVDTAGQDE 84 Query: 66 YDRLRPLSY-PDTDVILMCFSVDSPDSLENIPEKWVP-EVKHFCPNVPIILVANKKDLRS 123 Y L P S+ ++ +SV S S + I + H VP++LV NK DL Sbjct: 85 YSIL-PYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVLVGNKADLSP 143 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR--AALQK 181 + V+ +G+ +A A ++E SA+ + + +F + A ++ Sbjct: 144 E------------REVQAVEGKKLAESWGA-TFMESSARENQLTQGIFTKVIQEIARVEN 190 Query: 182 RYGSQNGC 189 YG + C Sbjct: 191 SYGQERRC 198 >2GF0-A nrPDB Length = 199 Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 16/157 (10%) Query: 18 KTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L++ F K F + Y+PT+ + Y I D L + DT G + ++ LS Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKG 80 Query: 78 DVILMCFSVDSPDSLENIPE--KWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMK 135 ++ FSV S SLE + K + ++K ++P++LV NK D Sbjct: 81 HAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCD-------------ET 127 Query: 136 QEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFE 172 Q V T + +A+A + ++E SAK V+E+F+ Sbjct: 128 QREVDTREAQAVAQEWKCA-FMETSAKMNYNVKELFQ 163 >6HUF-A nrPDB Length = 182 Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 4/134 (2%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQED 65 K + +GD GKT +L ++ +F ++ TV ++ I + K+++L LWDTAG E Sbjct: 11 KFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQLWDTAGLER 70 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKH--FCPNVPIILVANKKDLRS 123 + L + D L+ F + + +S N+ W+ ++K + N I+L NK DL Sbjct: 71 FRSLTTAFFRDAMGFLLLFDLTNEESFLNV-RNWISQLKTHAYSENPDIVLCGNKSDLED 129 Query: 124 DEHVRTELARMKQE 137 + V AR E Sbjct: 130 ERVVAAAEARQLAE 143 >2ERY-A nrPDB Length = 172 Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 16/161 (9%) Query: 18 KTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I F + F Y PT+ ++Y +D + L + DTAGQE++ +R Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTG 77 Query: 78 DVILMCFSVDSPDSLENIP--EKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMK 135 + L+ FSV S E I ++ + VK P+IL+ NK DL +H Sbjct: 78 EGFLLVFSVTDRGSFEEIYKFQRQILRVKD-RDEFPMILIGNKADL---DH--------- 124 Query: 136 QEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 Q V ++G+ +A +++ Y+E SAK + V + F R Sbjct: 125 QRQVTQEEGQQLARQLKV-TYMEASAKIRMNVDQAFHELVR 164 >4DJT-A nrPDB Length = 218 Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 17/160 (10%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV--FENYVADIEVDGKQVELALWDTAGQE 64 K+ ++GDG GKT + F + Y TV + V ++ G ++ +WDTAGQE Sbjct: 13 KICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAGQE 72 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN-VPIILVANKKDLRS 123 L+ + Y ++ F V S + +N+ +WV E + N PI++ ANK D+++ Sbjct: 73 KKAVLKDVYYIGASGAILFFDVTSRITCQNLA-RWVKEFQAVVGNEAPIVVCANKIDIKN 131 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKT 163 + + +L ++ + Y+Y E SAKT Sbjct: 132 RQKISKKLV-------------MEVLKGKNYEYFEISAKT 158 >2ATV-A nrPDB Length = 196 Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 14/177 (7%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 KL + G GK+ L++ F F Y PT+ Y +D + V + + DTAGQED Sbjct: 30 KLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQEDT 89 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 + +L+ D E +P K + + NV +ILV NK DL +H Sbjct: 90 IQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADL---DH 146 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEG-VREVFETATRAALQKR 182 R V T++G +A + A + ECSA T EG + E+F R ++R Sbjct: 147 SR---------QVSTEEGEKLATEL-ACAFYECSACTGEGNITEIFYELCREVRRRR 193 >3BC1-A nrPDB Length = 195 Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 14/140 (10%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEV-----------DGKQVEL 55 K + +GD GKT +L ++ +F ++ TV ++ V G+++ L Sbjct: 13 KFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIHL 72 Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKH--FCPNVPII 113 LWDTAG E + L + D L+ F + + S N+ W+ +++ + N I+ Sbjct: 73 QLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNV-RNWISQLQMHAYSENPDIV 131 Query: 114 LVANKKDLRSDEHVRTELAR 133 L NK DL V+ E AR Sbjct: 132 LCGNKSDLEDQRAVKEEEAR 151 >1YVD-A nrPDB Length = 169 Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/172 (25%), Positives = 83/172 (48%), Gaps = 16/172 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 65 K+ ++GD GK+ ++ F +D F PT+ +++ ++ + + +WDTAGQE Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQER 66 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSD 124 + L P+ Y + ++ + + ++ + + WV E++ H P++ + + NK DL Sbjct: 67 FRALAPMYYRGSAAAIIVYDITKEETFSTL-KNWVRELRQHGPPSIVVAIAGNKCDLTD- 124 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 VR + R D + A I A ++E SAK + E+F +R Sbjct: 125 --VREVMER---------DAKDYADSIHAI-FVETSAKNAININELFIEISR 164 >3E5H-A nrPDB Length = 178 Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 10/129 (7%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV-FENYVADIEVDGK-QVELALWDTAGQE 64 K+VV+GDGA GKT L F+++ F + Y T+ + ++ I + G V L +WD GQ Sbjct: 8 KIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQT 67 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKW---VPEVKHFCPNVPII-LVANKKD 120 ++ +L+ + + + S EN+ E W V +V P++ LV NK D Sbjct: 68 IGGKMLDKYIYGAQGVLLVYDITNYQSFENL-EDWYTVVKKVSEESETQPLVALVGNKID 126 Query: 121 LRSDEHVRT 129 L EH+RT Sbjct: 127 L---EHMRT 132 >3PIR-A nrPDB Length = 183 Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 57/158 (36%), Positives = 81/158 (51%), Gaps = 16/158 (10%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 KLVVVGDG GK+ L I F + F Y PT+ ++Y+ E+D + L + DTAGQE++ Sbjct: 20 KLVVVGDGGVGKSALTIQFFQKIFVPEYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEF 79 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIP--EKWVPEVKHFCPNVPIILVANKKDLRSD 124 +R D L+ +SV S E++ + + VK + P+ILVANK DL Sbjct: 80 SAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKD-RESFPMILVANKVDLM-- 136 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAK 162 H+R V D G+ MA + Y+E SAK Sbjct: 137 -HLRK---------VTRDQGKEMATKYNI-PYIETSAK 163 >3CBQ-A nrPDB Length = 195 Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 18/180 (10%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFEN-YVADIEVDGKQVELALWDTAGQED 65 K+++VG+ GK+ L F + + P E+ Y I VD ++V L ++D Q D Sbjct: 25 KVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVVYDIWEQGD 84 Query: 66 YDR-LRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN--VPIILVANKKDLR 122 LR D L+ FSV S +PE + ++ P+ +P+ILV NK D Sbjct: 85 AGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVPETLL-RLRAGRPHHDLPVILVGNKSD-- 141 Query: 123 SDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 182 LAR ++ V ++GR +A + ++E SA RE+FE A R +R Sbjct: 142 --------LARSRE--VSLEEGRHLAGTLSC-KHIETSAALHHNTRELFEGAVRQIRLRR 190 >2FN4-A nrPDB Length = 181 Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 20/172 (11%) Query: 18 KTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I F + F Y PT+ ++Y VDG L + DTAGQE++ +R Sbjct: 22 KSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAG 81 Query: 78 DVILMCFSVDSPDSLENIPEKW--VPEVKHFCPNVPIILVANKKDLRSDEHV-RTELARM 134 L+ F+++ S + + + + VK + P++LV NK DL S V R+E + Sbjct: 82 HGFLLVFAINDRQSFNEVGKLFTQILRVKD-RDDFPVVLVGNKADLESQRQVPRSEASAF 140 Query: 135 KQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRYGSQ 186 G + V Y E SAK + V E FE RA ++Y Q Sbjct: 141 ---------GASHHVA-----YFEASAKLRLNVDEAFEQLVRAV--RKYQEQ 176 >3RAP-R nrPDB Length = 167 Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 16/161 (9%) Query: 18 KTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L + F F E Y PT+ + Y +IEVD L + DTAG E + +R L + Sbjct: 16 KSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNG 75 Query: 78 DVILMCFSVDSPDSLENIP--EKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMK 135 ++ +S+ + S ++I + VK + VP+ILV NK DL S+ V + Sbjct: 76 QGFILVYSLVNQQSFQDIKPMRDQIIRVKRY-EKVPVILVGNKVDLESEREVSSSE---- 130 Query: 136 QEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 GRA+A ++E SAK+K V E+F R Sbjct: 131 --------GRALAEE-WGCPFMETSAKSKTMVDELFAEIVR 162 >3Q85-A nrPDB Length = 169 Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 18/180 (10%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVY-VPTVFENYVADIEVDGKQVELALWDTAGQED 65 K+++VG+ GK+ L F + + + + Y I VD ++V L ++D Q D Sbjct: 4 KVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQGD 63 Query: 66 YDR-LRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN--VPIILVANKKDLR 122 L+ D L+ FSV S +PE + ++ P+ +P+ILV NK D Sbjct: 64 AGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVPETLL-RLRAGRPHHDLPVILVGNKSD-- 120 Query: 123 SDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 182 LAR ++ V ++GR +A + ++E SA RE+FE A R +R Sbjct: 121 --------LARSRE--VSLEEGRHLAGTLSC-KHIETSAALHHNTRELFEGAVRQIRLRR 169 >3CLV-A nrPDB Length = 208 Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/203 (22%), Positives = 82/203 (40%), Gaps = 54/203 (26%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV---FENYVADIEVDGK------------ 51 K V++G+ + GK+ +++ +KD F E T+ F YV ++ Sbjct: 9 KTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNEKNNNI 68 Query: 52 -----------------------QVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDS 88 ++ +WDTAGQE Y + PL Y ++ F + + Sbjct: 69 NSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIVVFDISN 128 Query: 89 PDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMA 148 ++L+ + WV ++K N IILVANK D + E+ + Q D + Sbjct: 129 SNTLDR-AKTWVNQLK-ISSNYIIILVANKIDKNKFQVDILEVQKYAQ------DNNLL- 179 Query: 149 VRIQAYDYLECSAKTKEGVREVF 171 +++ SAKT ++ +F Sbjct: 180 -------FIQTSAKTGTNIKNIF 195 >5XC3-A nrPDB Length = 176 Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 4/118 (3%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD--IEVDGKQVELALWDTAGQE 64 K++++G GK+ ++ F + PT+ + + I +GK ++L +WDTAGQE Sbjct: 7 KIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQE 66 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIIL-VANKKDL 121 + + + Y ++ L+ F V +S +++ W+ +++ C IL VANK D+ Sbjct: 67 RFRSITKMYYTNSLGCLVVFDVTDRESFDDVYY-WINDLRINCHTTYYILVVANKIDI 123 >5C1S-A nrPDB Length = 391 Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 15/167 (8%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 +L+VVG GKT L D F E + E +++D + +++ D AGQ+ + Sbjct: 64 RLLVVGSSGVGKTTLC-----DCFFESHQSQGEETREKHVQIDNDFIRISISDIAGQQSF 118 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP-NVPIILVANKKDLRSDE 125 Y D IL+ + + S ++ W+P++ +C + II++ NKKD D Sbjct: 119 YACDN-PYDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIGNKKDQEIDR 177 Query: 126 HV-RTELARMKQ-------EPVRTDDGRAMAVRIQAYDYLECSAKTK 164 + R E + Q E DD + + D+L+C K + Sbjct: 178 IITRKEAEQFAQDRLCQFYEISTKDDSCQLLFDCISRDFLQCDIKIR 224 >2NZJ-A nrPDB Length = 175 Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 20/171 (11%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++V++GD GKT L +F+ + +++ + Y + VDG+ L + DT E Sbjct: 6 RVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERTLTVDGEDTTLVVVDTWEAEKL 65 Query: 67 DR--LRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRS 123 D+ + ++ +S+ S E+ E + + H +VPIILV NK D Sbjct: 66 DKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNKAD--- 122 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYD--YLECSAKTKEGVREVFE 172 LAR ++ V ++GRA AV +D ++E SA + V E+FE Sbjct: 123 -------LARCRE--VSVEEGRACAV---VFDCKFIETSATLQHNVAELFE 161 >3Q72-A nrPDB Length = 166 Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 21/180 (11%) Query: 7 KLVVVGDGACGKTCLLIVFSK-DEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K++++G GK+ L +F ++ PE Y I VDG++ L ++D Q+ Sbjct: 4 KVLLLGAPGVGKSALARIFGGVEDGPEA--EAAGHTYDRSIVVDGEEASLMVYDIWEQDG 61 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSD 124 L D ++ +SV S E E V + +VPIILV NK DL Sbjct: 62 GRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDL--- 118 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYD--YLECSAKTKEGVREVFETATRAALQKR 182 ++ V D+GRA AV +D ++E SA V+ +FE R +R Sbjct: 119 ---------VRSREVSVDEGRACAV---VFDCKFIETSAALHHNVQALFEGVVRQIRLRR 166 >2CJW-A nrPDB Length = 192 Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 31/187 (16%) Query: 7 KLVVVGDGACGKTCLLIVF-----SKDEFPEVYVPTVFENYVADIEVDGKQ---VELALW 58 ++V++G+ GK+ L +F S D EV +E + VDG+ + L +W Sbjct: 8 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLM---VDGESATIILLDMW 64 Query: 59 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVAN 117 + G+ ++ L D L+ +S+ S E E + + ++PIILV N Sbjct: 65 ENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGN 122 Query: 118 KKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYD--YLECSAKTKEGVREVFETAT 175 K DL ++ V +GRA AV +D ++E SA + V+E+FE Sbjct: 123 KSDL------------VRCREVSVSEGRACAV---VFDCKFIETSAAVQHNVKELFEGIV 167 Query: 176 RAALQKR 182 R +R Sbjct: 168 RQVRLRR 174 >2G3Y-A nrPDB Length = 211 Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 31/187 (16%) Query: 7 KLVVVGDGACGKTCLLIVF-----SKDEFPEVYVPTVFENYVADIEVDGKQ---VELALW 58 ++V++G+ GK+ L +F S D EV +E + VDG+ + L +W Sbjct: 39 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLM---VDGESATIILLDMW 95 Query: 59 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVAN 117 + G+ ++ L D L+ +S+ S E E + + ++PIILV N Sbjct: 96 ENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGN 153 Query: 118 KKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYD--YLECSAKTKEGVREVFETAT 175 K DL ++ V +GRA AV +D ++E SA + V+E+FE Sbjct: 154 KSDL------------VRCREVSVSEGRACAV---VFDCKFIETSAAVQHNVKELFEGIV 198 Query: 176 RAALQKR 182 R +R Sbjct: 199 RQVRLRR 205 >6FF8-A nrPDB Length = 181 Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 8/125 (6%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADI-EVDGKQ-VELALWDTAGQE 64 K++V+G+ GKT ++ + F + Y T+ ++ + D + V L LWD AG E Sbjct: 10 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGLE 69 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV--KHFCPN---VPIILVANKK 119 + + + Y + + F + + E + KW ++ K PN +P +L+ANK Sbjct: 70 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 128 Query: 120 DLRSD 124 D D Sbjct: 129 DQNKD 133 >2YC4-C nrPDB Length = 208 Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 11/142 (7%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSK--DEFPEVYVPTV-FENYVADIEVDGK--QVELA 56 A +R K+ VVG+ GK+ L+ +F+ +F + Y T E VA + + VEL Sbjct: 17 ATLRCKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELF 76 Query: 57 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN----VPI 112 L DTAG + Y + ++ F V S +S E+ + W +K P+ + Sbjct: 77 LLDTAGSDLYKEQISQYWNGVYYAILVFDVSSMESFESC-KAWFELLKSARPDRERPLRA 135 Query: 113 ILVANKKDLRSDEH-VRTELAR 133 +LVANK DL H VR ++A+ Sbjct: 136 VLVANKTDLPPQRHQVRLDMAQ 157 >4CZ2-A nrPDB Length = 230 Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 8/125 (6%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADI-EVDGKQ-VELALWDTAGQE 64 K++V+G+ GKT ++ + F + Y T+ ++ + D + V L LWD AG E Sbjct: 32 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGLE 91 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV--KHFCPN---VPIILVANKK 119 + + + Y + + F + + E + KW ++ K PN +P +L+ANK Sbjct: 92 RFGNMTRVYYKEAMGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 150 Query: 120 DLRSD 124 D D Sbjct: 151 DQNKD 155 >4YLG-A nrPDB Length = 173 Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 17/122 (13%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++++VG A GKT +L E +PT+ N V+ K + +WD GQ Sbjct: 15 RILMVGLDAAGKTSILYKLKLGEIVTT-IPTIGFNVET---VEYKNISFTVWDVGGQ--- 67 Query: 67 DRLRPL---SYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHF----CPNVPIILVANKK 119 D++RPL Y +T I+ F VDS D + I E +K N +++ ANK Sbjct: 68 DKIRPLWRHYYQNTQAII--FVVDSNDR-DRIGEAREELMKMLNEDEMRNAILLVFANKH 124 Query: 120 DL 121 DL Sbjct: 125 DL 126 >1YZG-A nrPDB Length = 179 Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 9/121 (7%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K+++VG GKT +L F +E PT+ N V +I V K +WD GQE Sbjct: 17 HKVIIVGLDNAGKTTILYQFLMNEVVHT-SPTIGSN-VEEIVV--KNTHFLMWDIGGQES 72 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPD--SLENIPEKWVPEVKHF-CPNVPIILVANKKDLR 122 Y +T+ I++ VDS D L E+ + H +++ ANK+D++ Sbjct: 73 LRSSWNTYYSNTEFIILV--VDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMK 130 Query: 123 S 123 Sbjct: 131 G 131 >3D6T-B nrPDB Length = 171 Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 7/128 (5%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VAD--IEVDGKQ---VELALWDT 60 KL++VG+ GKT LL K + ++ + + V D I++ K+ + L +WD Sbjct: 2 KLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWDF 61 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKD 120 AG+E++ P + L + + + + + W+ +K + P+ILV D Sbjct: 62 AGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSSPVILVGTHLD 121 Query: 121 LRSDEHVR 128 + SDE R Sbjct: 122 V-SDEKQR 128 >5DE3-A nrPDB Length = 169 Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust. Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 37/178 (20%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 +++V+G GKT +L S+++ + PT N + + DG L +WD GQ+ Sbjct: 2 RILVLGLDNAGKTTILKALSEEDITTI-TPTQGFN-IKSLSRDG--FNLKIWDIGGQKS- 56 Query: 67 DRLRPL--SYPD-TDVILMCFSVDSPDSLENIPEKWVPEVKHF----CPNVPIILVANKK 119 +RP +Y D TD ++ + +DS DS + + E + VP+++ ANK+ Sbjct: 57 --IRPYWRNYFDQTDALI--YVIDSADS-KRLSESEFELTELLQEEKMTGVPLLVFANKQ 111 Query: 120 D----LRSDEHVRT-ELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFE 172 D L +DE T +L ++ P +IQA CSAK G++E E Sbjct: 112 DLVGALAADEIASTLDLTSIRDRP----------WQIQA-----CSAKQGTGLKEGME 154 >2AL7-A nrPDB Length = 186 Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 20/124 (16%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 +L +VG GKT + V + +F E +PTV N +V V + +WD GQ + Sbjct: 24 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMR---KVTKGNVTIKIWDIGGQPRF 80 Query: 67 DRLRPLSYPDTDVILMCFSVDSPD---------SLENIPEKWVPEVKHFCPNVPIILVAN 117 + + I+ + +D+ D L N+ +K P+++ +P++++ N Sbjct: 81 RSMWERYCRGVNAIV--YMIDAADREKIEASRNELHNLLDK--PQLQ----GIPVLVLGN 132 Query: 118 KKDL 121 K+DL Sbjct: 133 KRDL 136 >3LRP-A nrPDB Length = 181 Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 25/126 (19%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVY--VPTVFENYVADIEVDGKQVELALWDTAGQE 64 ++++VG A GKT +L K + EV +PT+ N V+ + + +WD GQ Sbjct: 19 RILMVGLDAAGKTTILY---KVKLGEVVTTIPTIGFNVET---VEFRNISFTVWDVGGQ- 71 Query: 65 DYDRLRPL---SYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN------VPIILV 115 D++RPL Y +TD ++ F VDS D E I + E H N I++ Sbjct: 72 --DKIRPLWRHYYSNTDGLI--FVVDSNDR-ERIDD--AREELHRMINEEELKDAIILVF 124 Query: 116 ANKKDL 121 ANK+DL Sbjct: 125 ANKQDL 130 >4ILE-A nrPDB Length = 184 Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 20/124 (16%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 +L +VG GKT + V + +F E +PTV N ++ V + LWD GQ + Sbjct: 24 ELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMR---KITKGNVTIKLWDIGGQPRF 80 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDS---------LENIPEKWVPEVKHFCPNVPIILVAN 117 + I+ + VD+ D L N+ +K P+++ +P++++ N Sbjct: 81 RSMWERYCRGVSAIV--YMVDAADQEKIEASKNELHNLLDK--PQLQ----GIPVLVLGN 132 Query: 118 KKDL 121 K+DL Sbjct: 133 KRDL 136 >2H16-A nrPDB Length = 183 Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K+++VG GKT +L FS +E PT+ N V +I ++ + +WD GQE Sbjct: 24 KVIIVGLDNAGKTTILYQFSMNEVVHTS-PTIGSN-VEEIVINNTR--FLMWDIGGQESL 79 Query: 67 DRLRPLSYPDTDVILMCFSVDSPD 90 Y +T+ +++ VDS D Sbjct: 80 RSSWNTYYTNTEFVIVV--VDSTD 101 >3C5C-A nrPDB Length = 187 Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 77/178 (43%), Gaps = 22/178 (12%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 L ++G GK+ L + F F Y P + + Y ++ VD + V L + DTA D Sbjct: 23 NLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQPVHLRVMDTA---DL 79 Query: 67 DRLRPLS-YPD-TDVILMCFSVDSPDSLENIP---EKWVPEVKHFCPNVPIILVANKKDL 121 D R Y + L+ +SVDS S ++ E K ++P +L+ NK D Sbjct: 80 DTPRNCERYLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLGNKLD- 138 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSA-KTKEGVREVFETATRAA 178 +A+ +Q V +G A+A R + E SA E V+ VF A R A Sbjct: 139 ---------MAQYRQ--VTKAEGVALAGRFGCL-FFEVSACLDFEHVQHVFHEAVREA 184 >4ZI3-A nrPDB Length = 190 Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust. Identities = 40/169 (23%), Positives = 80/169 (47%), Gaps = 25/169 (14%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 +++++G GKT LL + ++ + PT N + V + +L +WD GQ Sbjct: 19 RILLLGLDNAGKTTLLKQLASEDISHI-TPTQGFNIKS---VQSQGFKLNVWDIGGQR-- 72 Query: 67 DRLRPL---SYPDTDVILMCFSVDSPDS--LENIPEKWVPEVKHFCPN-VPIILVANKKD 120 ++RP + +TD+++ + +DS D E ++ ++ + VP+++ ANK+D Sbjct: 73 -KIRPYWRSYFENTDILI--YVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQD 129 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVRE 169 L + +E+A + +R + + CSA T EGV++ Sbjct: 130 LLTAAPA-SEIA---------EGLNLHTIRDRVWQIQSCSALTGEGVQD 168 >5UF8-A nrPDB Length = 181 Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 8/85 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++++VG A GKT +L E +PT+ N V+ K + +WD GQ Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVET---VEYKNISFTVWDVGGQ--- 71 Query: 67 DRLRPL-SYPDTDVILMCFSVDSPD 90 D++RPL Y + + F VDS D Sbjct: 72 DKIRPLWRYYFQNTQGIIFVVDSND 96 >4WNR-A nrPDB Length = 349 Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust. Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 13/119 (10%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDG-----KQVELALWDTA 61 K+++VGDG GKT LL K E + + +I+ G K++++ WD Sbjct: 43 KVLLVGDGEAGKTSLL----KRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIKVNFWDFG 98 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKD 120 GQE + ++ + E W+ ++ F + P+++ NK D Sbjct: 99 GQEIMHATHQFFLSKRSLYILVLDSRRDEK----AEYWLKHIRSFGGDSPVLVALNKID 153 >2LKD-A nrPDB Length = 178 Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 18/168 (10%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 + ++G GKT LL + E + + ++ +V ++ DT G E + Sbjct: 11 VTIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQ-HIGAYQVTVNDKKITFLDTPGHEAFT 69 Query: 68 RLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHF-CPNVPIILVANKKDLRSDEH 126 +R TD++++ + D + + + V + H NVPII+ NK D Sbjct: 70 TMRARGAQVTDIVILVVAAD-----DGVMPQTVEAINHAKAANVPIIVAINKMDKPEANP 124 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLEC--SAKTKEGVREVFE 172 R M+ V + G D + C SAKTKEG+ + E Sbjct: 125 DRVMQELMEYNLVPEEWGG---------DTIFCKLSAKTKEGLDHLLE 163 >6FAE-B nrPDB Length = 213 Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust. Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 17/122 (13%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++++VG A GKT +L E +PT+ N V +E K + +WD GQ Sbjct: 51 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFN-VETVEY--KNISFTVWDVGGQ--- 103 Query: 67 DRLRPL---SYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP----NVPIILVANKK 119 D++RPL + +T ++ F VDS D E + E ++ + +++ ANK+ Sbjct: 104 DKIRPLWRHYFQNTQGLI--FVVDSNDR-ERVNEAREELMRMLAEDELRDAVLLVFANKQ 160 Query: 120 DL 121 DL Sbjct: 161 DL 162 >3AQ4-A nrPDB Length = 184 Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 12/87 (13%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++++VG A GKT +L E +PT+ N V +E K + +WD GQ Sbjct: 22 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFN-VETVEY--KNISFTVWDVGGQ--- 74 Query: 67 DRLRPL---SYPDTDVILMCFSVDSPD 90 D++RPL + +T ++ F VDS D Sbjct: 75 DKIRPLWRHYFQNTQGLI--FVVDSND 99 >3O47-A nrPDB Length = 329 Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 17/122 (13%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++++VG A GKT +L E +PT+ N V+ K + +WD GQ Sbjct: 167 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVET---VEYKNISFTVWDVGGQ--- 219 Query: 67 DRLRPL---SYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP----NVPIILVANKK 119 D++RPL + +T ++ F VDS D E + E ++ + +++ ANK+ Sbjct: 220 DKIRPLWRHYFQNTQGLI--FVVDSNDR-ERVNEAREELMRMLAEDELRDAVLLVFANKQ 276 Query: 120 DL 121 DL Sbjct: 277 DL 278 >2H57-A nrPDB Length = 190 Score = 33.9 bits (76), Expect = 0.040, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 11/77 (14%) Query: 53 VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKW-------VPEVKH 105 + ++D +GQ Y L Y + I+ F +DS D L + K P++KH Sbjct: 67 LSFTVFDMSGQGRYRNLWEHYYKEGQAII--FVIDSSDRLRMVVAKEELDTLLNHPDIKH 124 Query: 106 FCPNVPIILVANKKDLR 122 +PI+ ANK DLR Sbjct: 125 --RRIPILFFANKMDLR 139 >5NZV-F nrPDB Length = 181 Score = 33.9 bits (76), Expect = 0.048, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 19/123 (15%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++++VG GKT +L E +PT+ N V K + +WD GQ Sbjct: 19 RILMVGLDGAGKTTVLYKLKLGEVITT-IPTIGFNVET---VQYKNISFTVWDVGGQ--- 71 Query: 67 DRLRPL---SYPDTDVILMCFSVDSPD-----SLENIPEKWVPEVKHFCPNVPIILVANK 118 DR+R L Y +T+ ++ F VDS D + ++ + E + N ++ ANK Sbjct: 72 DRIRSLWRHYYRNTEGVI--FVVDSNDRSRIGEAREVMQRMLNEDE--LRNAAWLVFANK 127 Query: 119 KDL 121 +DL Sbjct: 128 QDL 130 >3T1O-A nrPDB Length = 198 Score = 33.5 bits (75), Expect = 0.057, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 83/205 (40%), Gaps = 41/205 (20%) Query: 4 IRKKLVVVGDGACGKTC-LLIVFSKDEFPE------VYVPT------VFENYVADI-EVD 49 I K+V G G GKT L ++SK PE V + T F+ DI EV Sbjct: 13 INFKIVYYGPGLSGKTTNLKWIYSK--VPEGRKGEMVSLATEDERTLFFDFLPLDIGEVK 70 Query: 50 GKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSP--------DSLENIPEKWVP 101 G + L+ GQ Y+ R L D I F DS +S+ N+ E + Sbjct: 71 GFKTRFHLYTVPGQVFYNASRKLILRGVDGI--VFVADSAPNRLRANAESMRNMREN-LA 127 Query: 102 EVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSA 161 E +VPI++ NK+DL + + E+ R +P +G+ + LE A Sbjct: 128 EYGLTLDDVPIVIQVNKRDL--PDALPVEMVRAVVDP----EGK--------FPVLEAVA 173 Query: 162 KTKEGVREVFETATRAALQKRYGSQ 186 +GV E + +R L + G Sbjct: 174 TEGKGVFETLKEVSRLVLARVAGGS 198 >4V0N-A nrPDB Length = 169 Score = 33.5 bits (75), Expect = 0.059, Method: Compositional matrix adjust. Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 15/127 (11%) Query: 2 AAIRKKLVVVGDGACGKTCLL--IVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWD 59 A+ + ++VVG GKT ++ + + EV PTV + D EV+ + ++D Sbjct: 3 ASKKVNVLVVGLDNSGKTTIIERLKPRPRQAAEV-APTV--GFTVD-EVEKGPLTFTVFD 58 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN-----VPIIL 114 +G Y L Y + D ++ F VDS D L + + E++H + VPI+ Sbjct: 59 MSGAGRYRTLWEQYYREADAVV--FVVDSADKLRMVVAR--DEMEHMLKHSNMRKVPILY 114 Query: 115 VANKKDL 121 ANKKDL Sbjct: 115 FANKKDL 121 >3BH6-A nrPDB Length = 164 Score = 33.1 bits (74), Expect = 0.086, Method: Compositional matrix adjust. Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 25/169 (14%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 +++++G GKT LL + ++ + PT N + V + +L +WD G Sbjct: 6 RILLLGLDNAGKTTLLKQLASEDISHI-TPTQGFNIKS---VQSQGFKLNVWDIGG---L 58 Query: 67 DRLRPL---SYPDTDVILMCFSVDSPDS--LENIPEKWVPEVKHFCPN-VPIILVANKKD 120 ++RP + +TD+++ + +DS D E ++ ++ + VP+++ ANK+D Sbjct: 59 RKIRPYWRSYFENTDILI--YVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQD 116 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVRE 169 L + +E+A + +R + + CSA T EGV++ Sbjct: 117 LLTAAPA-SEIA---------EGLNLHTIRDRVWQIQSCSALTGEGVQD 155 >6CES-A nrPDB Length = 313 Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust. Identities = 33/153 (21%), Positives = 70/153 (45%), Gaps = 21/153 (13%) Query: 2 AAIRKKLVVVGDGACGKTCLL-IVFSKDEFPEVYVPTVFENYVADIEVDGKQVE------ 54 A++KK++++G GKT + I+F+ Y+ A I+V+ V Sbjct: 4 TAMKKKVLLMGKSGSGKTSMRSIIFAN------YIARDTRRLGATIDVEHSHVRFLGNLV 57 Query: 55 LALWDTAGQED-----YDRLRPLSYPDTDVILMCFSVDSPDSLENIP--EKWVPEVKHFC 107 L LWD GQ+ + R + + +V++ F V+S + +++ + + + Sbjct: 58 LNLWDCGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNS 117 Query: 108 PNVPIILVANKKDLRSDEHVRTELARMKQEPVR 140 P+ I + +K DL ++ R + + ++E +R Sbjct: 118 PDAKIFCLVHKMDLVQEDQ-RDLIFKEREEDLR 149 >3DPU-A nrPDB Length = 535 Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust. Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 13/123 (10%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVE---------LAL 57 K+ ++GDG GKT LL + F T N V + K +E Sbjct: 43 KVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFHF 102 Query: 58 WDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVAN 117 WD GQE + V ++ + DS ++ W+ ++ + P+I+V N Sbjct: 103 WDFGGQEIMHASHQFFMTRSSVYMLLLDSRT-DSNKHY---WLRHIEKYGGKSPVIVVMN 158 Query: 118 KKD 120 K D Sbjct: 159 KID 161 >2HJR-A nrPDB Length = 328 Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 18/129 (13%) Query: 4 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA-- 61 +RKK+ ++G G G T L++ KD +VY+ + E +D + A Sbjct: 13 MRKKISIIGAGQIGSTIALLLGQKD-LGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKI 71 Query: 62 -GQEDYDRLRPLSYPDTDVILMCFSVD-----SPDSLENIPEKWVPEVKH----FCPNVP 111 G+ +Y+ L+ ++DV+++ V + L + K V V +CPN Sbjct: 72 FGENNYEYLQ-----NSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAF 126 Query: 112 IILVANKKD 120 +I + N D Sbjct: 127 VICITNPLD 135 >2QAG-A nrPDB Length = 361 Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 10/68 (14%) Query: 8 LVVVGDGACGKTCLL-IVFSKDEFPEVYVPTV---------FENYVADIEVDGKQVELAL 57 L+VVG+ GK+ L+ +F D +PE +P E +IE G ++ L + Sbjct: 40 LMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLRLTV 99 Query: 58 WDTAGQED 65 DT G D Sbjct: 100 VDTPGYGD 107 >3H2Y-A nrPDB Length = 368 Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust. Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 7/63 (11%) Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLE-------NIPEKWVPEVKHFCPNVPIILVANK 118 Y+ ++ +S D D + + + D+L + W+P + F N ++LV NK Sbjct: 46 YNEIQDVSLTDDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNK 105 Query: 119 KDL 121 DL Sbjct: 106 ADL 108 >3FTQ-A nrPDB Length = 274 Score = 30.4 bits (67), Expect = 0.51, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 10/68 (14%) Query: 8 LVVVGDGACGKTCLL-IVFSKDEFPEVYVPTV---------FENYVADIEVDGKQVELAL 57 L+VVG+ GK+ L+ +F D +PE +P E +IE G ++ L + Sbjct: 8 LMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLRLTV 67 Query: 58 WDTAGQED 65 DT G D Sbjct: 68 VDTPGYGD 75 >6DQW-A nrPDB Length = 585 Score = 29.6 bits (65), Expect = 0.77, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 12/66 (18%) Query: 33 VYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSL 92 +Y P + E++V IE + +W G E R P+S CF+V PD + Sbjct: 78 LYKPELKESFVEMIERGWMSISSPVWANMGTE---RGLPIS---------CFNVHVPDKI 125 Query: 93 ENIPEK 98 E I K Sbjct: 126 EGITHK 131 >3P7M-A nrPDB Length = 321 Score = 29.6 bits (65), Expect = 0.77, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 18/132 (13%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQ---VELALW 58 A RKK+ +VG G G T + K + +V + + + +D Q +E + Sbjct: 2 AMARKKITLVGAGNIGGTLAHLALIK-QLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDF 60 Query: 59 DTAGQEDYDRLRPLSYPDTDVILMCFSVD-----SPDSLENIPEKWVPEV----KHFCPN 109 G DY L ++DV+++ V S D L I K + V KH CPN Sbjct: 61 KVRGTNDYKDLE-----NSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPN 115 Query: 110 VPIILVANKKDL 121 +I + N D+ Sbjct: 116 AFVICITNPLDI 127 >4ND4-A nrPDB Length = 321 Score = 29.6 bits (65), Expect = 0.90, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 18/129 (13%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA--- 61 R+K+ V+G G G IV KD +V + + E +D + T+ Sbjct: 4 RRKIAVIGSGQIGGNIAYIV-GKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVI 62 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSV------DSPDSL---ENIPEKWVPEVKHFCPNVPI 112 G DY + +DV+++ S+ D + L I + VK +CPN + Sbjct: 63 GTNDYADIS-----GSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFV 117 Query: 113 ILVANKKDL 121 I + N D+ Sbjct: 118 ICITNPLDV 126 >5YMX-A nrPDB Length = 203 Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 54/135 (40%), Gaps = 23/135 (17%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVP----------TVFENY--VADIEVDGKQVE 54 K+V G G CGKT L E T+F ++ ++ E+ G + Sbjct: 14 KIVYYGPGLCGKTTNLQYIYNKTAAETKGKLISLSTETDRTLFFDFLPLSLGEIRGFKTR 73 Query: 55 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSP--------DSLENIPEKWVPEVKHF 106 L+ GQ YD R L D ++ F DS +SLEN+ + E + Sbjct: 74 FHLYTVPGQVFYDASRKLILKGVDGVV--FVADSQIERMEANMESLENL-RINLAEQGYD 130 Query: 107 CPNVPIILVANKKDL 121 +P ++ NK+DL Sbjct: 131 LNKIPYVIQYNKRDL 145 >5NTF-A nrPDB Length = 520 Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Query: 15 ACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71 A G+TC +++ PE +V T F + VAD+ KQV A AGQ + L P Sbjct: 432 ASGETCFPVLYC----PEYHV-TEFRSPVADMRNSVKQVNNASVSCAGQFVANHLSP 483 >4PLW-A nrPDB Length = 326 Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust. Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 18/129 (13%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDT---A 61 RKK+ ++G G G T ++ K E +V + + E +D + Sbjct: 4 RKKISLIGAGNIGGTLAHLIAQK-ELGDVVLFDIVEGMPQGKALDISHSSPIMGSNVKIT 62 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVD-----SPDSLENIPEKWVPEV----KHFCPNVPI 112 G +Y+ ++ +DV+++ + S D L ++ K + +V K +CPN + Sbjct: 63 GTNNYEDIK-----GSDVVIITAGIPRKPGMSRDDLLSVNAKIMKDVAENIKKYCPNAFV 117 Query: 113 ILVANKKDL 121 I+V N D+ Sbjct: 118 IVVTNPLDV 126 >4PLF-A nrPDB Length = 334 Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 23/134 (17%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 RKK+ ++G G G T + K E +V + V +N GK ++L+ + Sbjct: 8 RKKISLIGSGMIGGTMAYLCAQK-ELGDVVLFDVVKNMP-----QGKALDLSHSSSIADT 61 Query: 65 DYDRLRPLSYPD---TDVILMCFSVD----------SPDSLENIPEKWVPEV----KHFC 107 + SY D +DV+++ + S D L K + EV K +C Sbjct: 62 NVKVTGTNSYEDIKGSDVVIITAGLTKAPGKSDKEWSRDDLLPFNAKIMREVGENIKKYC 121 Query: 108 PNVPIILVANKKDL 121 PN +I++ N D+ Sbjct: 122 PNAFVIVITNPLDV 135 >6HLU-A nrPDB Length = 974 Score = 28.1 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 21/127 (16%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-----------VADIEVDG--KQV 53 K+ ++GDG GKT LL K E + P + + + +E D K+ Sbjct: 482 KVHLIGDGMAGKTSLL----KQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKEC 537 Query: 54 ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPII 113 WD GQE + V ++ + DS ++ W+ ++ + P+I Sbjct: 538 LFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRT-DSNKHY---WLRHIEKYGGKSPVI 593 Query: 114 LVANKKD 120 +V NK D Sbjct: 594 VVMNKID 600 >1JXH-A nrPDB Length = 288 Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust. Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 15/73 (20%) Query: 78 DVILMCFSVD---SPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARM 134 D +++ S D SP ++E + + +P+V PN+P L H RTE + Sbjct: 127 DTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLP-----EAAALLDAPHARTEQEML 181 Query: 135 KQEPVRTDDGRAM 147 Q GRA+ Sbjct: 182 AQ-------GRAL 187 >3CB4-D nrPDB Length = 599 Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust. Identities = 14/28 (50%), Positives = 17/28 (60%) Query: 149 VRIQAYDYLECSAKTKEGVREVFETATR 176 V I A D + CSAKT GV++V E R Sbjct: 151 VGIDATDAVRCSAKTGVGVQDVLERLVR 178 >5WU6-A nrPDB Length = 485 Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Query: 19 TCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71 T L+I F + P V +PTV + + +G+QVE+ WD + D RL P Sbjct: 313 TLLVIYFLQTRDPPV-LPTV--SQLTQKAGEGEQVEVDGWDCSFPRDASRLEP 362 >5WU3-A nrPDB Length = 573 Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Query: 19 TCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71 T L+I F + P V +PTV + + +G+QVE+ WD + D RL P Sbjct: 226 TLLVIYFLQTRDPPV-LPTV--SQLTQKAGEGEQVEVDGWDCSFPRDASRLEP 275 >3V7N-A nrPDB Length = 487 Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust. Identities = 12/52 (23%), Positives = 24/52 (46%) Query: 104 KHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYD 155 +H P VP++++ + ++ E +R L + P D A+ R + D Sbjct: 420 EHLRPGVPMVVLETAQPIKFGESIREALGQEPSRPAAFDGLEALPQRFEVVD 471 >1MOZ-A nrPDB Length = 183 Score = 26.9 bits (58), Expect = 5.4, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 12/87 (13%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 +++++G GKT +L E PT+ N + K ++L +WD GQ Sbjct: 20 RILILGLDGAGKTTILYRLQIGEVVTTK-PTIGFNVET---LSYKNLKLNVWDLGGQTS- 74 Query: 67 DRLRPL---SYPDTDVILMCFSVDSPD 90 +RP Y DT ++ F VDS D Sbjct: 75 --IRPYWRCYYADTAAVI--FVVDSTD 97 >5IRR-A nrPDB Length = 308 Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust. Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Query: 75 PDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARM 134 P D+ + C P L I K++ E+ P VP++ A+ +R RTE+A Sbjct: 142 PRVDLCIFCIP---PHRLRPIDLKYMFELGKHVPVVPVVTKADTMTIREANTYRTEVANR 198 Query: 135 KQEPV 139 P+ Sbjct: 199 IANPM 203 >3EC1-A nrPDB Length = 369 Score = 26.2 bits (56), Expect = 8.6, Method: Compositional matrix adjust. Identities = 10/23 (43%), Positives = 15/23 (65%) Query: 99 WVPEVKHFCPNVPIILVANKKDL 121 ++P + F + PI+LV NK DL Sbjct: 88 FIPGLPRFAADNPILLVGNKADL 110 >6HV9-A nrPDB Length = 914 Score = 26.2 bits (56), Expect = 9.9, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 9/77 (11%) Query: 24 VFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMC 83 + + EFP++ V++N V D+ VD V L +A D + +D++ Sbjct: 405 IMNDSEFPKINNSGVYDNVVLDVGVDNLTVNTIL-TSALINDAE--------GSDLVNNN 455 Query: 84 FSVDSPDSLENIPEKWV 100 +D D++ N P ++V Sbjct: 456 MGIDDKDAVINSPSEFV 472 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2FV8-A nrPDB 284 2e-77 5C2K-A nrPDB 281 1e-76 5ZHX-e nrPDB 279 5e-76 5JCP-B nrPDB 265 9e-72 5ZVP-A nrPDB 242 6e-65 3TH5-A nrPDB 240 2e-64 3A58-B nrPDB 239 5e-64 3RYT-C nrPDB 238 1e-63 2NTY-C nrPDB 233 4e-62 2J1L-A nrPDB 232 6e-62 3BWD-D nrPDB 232 6e-62 2WKQ-A nrPDB 232 6e-62 2WBL-C nrPDB 232 8e-62 2W2X-A nrPDB 230 2e-61 1RYH-A nrPDB 230 3e-61 2ATX-A nrPDB 228 1e-60 2J0V-A nrPDB 225 7e-60 3VHL-B nrPDB 225 9e-60 4U5X-A nrPDB 222 8e-59 5VCU-A nrPDB 221 1e-58 2Q3H-A nrPDB 221 1e-58 4MIT-A nrPDB 213 3e-56 1GWN-A nrPDB 210 4e-55 1M7B-A nrPDB 207 2e-54 5SZH-B nrPDB 206 4e-54 2RHD-A nrPDB 206 6e-54 3L0I-B nrPDB 205 1e-53 3CUE-F nrPDB 200 4e-52 5SZI-A nrPDB 200 4e-52 4LHX-A nrPDB 199 6e-52 1YZN-A nrPDB 199 7e-52 1Z0A-A nrPDB 199 7e-52 2WWX-A nrPDB 198 1e-51 5SZJ-A nrPDB 198 1e-51 2A5J-A nrPDB 198 1e-51 5LPN-A nrPDB 198 2e-51 3CPH-A nrPDB 198 2e-51 5FBL-B nrPDB 197 2e-51 4QXA-A nrPDB 197 3e-51 1WMS-A nrPDB 196 3e-51 6O62-A nrPDB 196 3e-51 2OCY-C nrPDB 196 6e-51 2OCB-A nrPDB 195 1e-50 2F9L-A nrPDB 195 1e-50 4G01-B nrPDB 195 2e-50 1ZBD-A nrPDB 194 2e-50 2GF9-A nrPDB 194 2e-50 1Z0F-A nrPDB 193 3e-50 4M8N-E nrPDB 193 5e-50 6IF2-B nrPDB 193 5e-50 3CPJ-B nrPDB 192 6e-50 1X3S-A nrPDB 191 1e-49 2O52-A nrPDB 191 1e-49 1TU4-A nrPDB 191 1e-49 2EW1-A nrPDB 191 2e-49 4RKE-A nrPDB 191 2e-49 2HEI-A nrPDB 190 2e-49 5XR6-A nrPDB 190 2e-49 5CM8-B nrPDB 190 2e-49 4UJ4-A nrPDB 190 2e-49 5YOZ-A nrPDB 190 3e-49 3RAB-A nrPDB 190 3e-49 3DZ8-A nrPDB 190 4e-49 2BMD-A nrPDB 189 7e-49 2IL1-A nrPDB 188 9e-49 4RKF-A nrPDB 188 1e-48 2KE5-A nrPDB 188 2e-48 2HUP-A nrPDB 188 2e-48 2REX-B nrPDB 188 2e-48 4DXA-A nrPDB 188 2e-48 4KYI-B nrPDB 187 2e-48 2G6B-A nrPDB 187 2e-48 2FG5-A nrPDB 187 2e-48 1EK0-A nrPDB 187 3e-48 5LDD-C nrPDB 186 5e-48 4KLZ-A nrPDB 185 8e-48 1ZC4-A nrPDB 185 1e-47 5UB8-A nrPDB 185 1e-47 3BFK-A nrPDB 184 2e-47 4PHF-A nrPDB 183 3e-47 6IYB-A nrPDB 183 4e-47 2F7S-A nrPDB 183 4e-47 3REG-A nrPDB 183 5e-47 2FFQ-A nrPDB 182 1e-46 1YVD-A nrPDB 181 1e-46 3RWM-B nrPDB 181 2e-46 3CON-A nrPDB 181 2e-46 2G77-B nrPDB 180 3e-46 1YZU-A nrPDB 180 5e-46 1Z06-A nrPDB 180 5e-46 1D5C-A nrPDB 179 9e-46 3TSO-A nrPDB 178 1e-45 6HUF-A nrPDB 178 1e-45 2IEZ-A nrPDB 178 2e-45 2P5S-A nrPDB 177 2e-45 2IEY-A nrPDB 177 3e-45 2GIL-A nrPDB 176 4e-45 5LEF-A nrPDB 176 5e-45 4KU4-A nrPDB 175 8e-45 3BC1-A nrPDB 174 2e-44 2ERX-A nrPDB 173 4e-44 5UHV-A nrPDB 173 5e-44 5WDQ-A nrPDB 172 8e-44 5WDR-A nrPDB 172 1e-43 2ATV-A nrPDB 172 1e-43 4WA7-A nrPDB 171 1e-43 1Z22-A nrPDB 171 2e-43 2FN4-A nrPDB 171 2e-43 5HZH-A nrPDB 170 2e-43 4FMC-F nrPDB 168 2e-42 2ERY-A nrPDB 167 3e-42 3OES-A nrPDB 162 7e-41 3PIR-A nrPDB 162 9e-41 3CBQ-A nrPDB 159 9e-40 5UWI-A nrPDB 158 1e-39 2N1B-A nrPDB 158 1e-39 3Q72-A nrPDB 158 2e-39 5CLL-A nrPDB 157 3e-39 3WYF-A nrPDB 157 3e-39 2G3Y-A nrPDB 156 7e-39 2CJW-A nrPDB 155 9e-39 5XOJ-A nrPDB 155 1e-38 3RAP-R nrPDB 155 2e-38 2GF0-A nrPDB 153 3e-38 3Q85-A nrPDB 153 5e-38 3T5G-A nrPDB 153 6e-38 2NZJ-A nrPDB 148 2e-36 4CZ2-A nrPDB 147 3e-36 6FF8-A nrPDB 146 5e-36 4DJT-A nrPDB 144 2e-35 5XC3-A nrPDB 143 5e-35 3CLV-A nrPDB 143 5e-35 3E5H-A nrPDB 136 7e-33 5C1S-A nrPDB 127 4e-30 2YC4-C nrPDB 110 3e-25 3D6T-B nrPDB 105 1e-23 2AL7-A nrPDB 101 2e-22 4ILE-A nrPDB 99 1e-21 1YZG-A nrPDB 98 2e-21 4YLG-A nrPDB 95 2e-20 3LRP-A nrPDB 93 1e-19 5DE3-A nrPDB 81 3e-16 Sequences not found previously or not previously below threshold: 3C5C-A nrPDB 105 1e-23 2H16-A nrPDB 93 5e-20 3LVQ-E nrPDB 93 6e-20 6FAE-B nrPDB 93 1e-19 3O47-A nrPDB 92 2e-19 1Z6X-A nrPDB 91 2e-19 2A5F-A nrPDB 91 4e-19 3AQ4-A nrPDB 90 5e-19 5NZV-F nrPDB 90 6e-19 6BBQ-A nrPDB 89 1e-18 6DFF-C nrPDB 89 1e-18 1J2J-A nrPDB 88 2e-18 2B6H-A nrPDB 88 3e-18 5UF8-A nrPDB 88 3e-18 4ZI3-A nrPDB 85 2e-17 5EE5-B nrPDB 85 2e-17 3IHW-A nrPDB 84 4e-17 3BH6-A nrPDB 81 2e-16 1MOZ-A nrPDB 81 4e-16 1KSG-A nrPDB 80 8e-16 4WNR-A nrPDB 78 3e-15 2IWR-A nrPDB 78 3e-15 6HLU-A nrPDB 77 6e-15 3DPU-A nrPDB 76 9e-15 2H57-A nrPDB 70 5e-13 4V0N-A nrPDB 70 5e-13 2X77-A nrPDB 68 3e-12 2GAO-A nrPDB 64 4e-11 1M2O-B nrPDB 62 1e-10 6GNI-B nrPDB 62 2e-10 4BAS-A nrPDB 59 1e-09 1F6B-A nrPDB 59 1e-09 5DI3-B nrPDB 58 4e-09 4C0K-A nrPDB 57 5e-09 4M9Q-A nrPDB 57 5e-09 4ARZ-A nrPDB 56 1e-08 2GJ9-A nrPDB 53 9e-08 3GEH-A nrPDB 53 1e-07 6CES-A nrPDB 52 2e-07 2LKD-A nrPDB 51 2e-07 6GDG-D nrPDB 51 5e-07 6IAE-A nrPDB 49 1e-06 3T1O-A nrPDB 49 1e-06 2YWH-A nrPDB 48 2e-06 2DYK-A nrPDB 48 3e-06 1MKY-A nrPDB 48 3e-06 6G79-A nrPDB 48 3e-06 1XZP-A nrPDB 46 8e-06 5LAD-A nrPDB 46 1e-05 5YMX-A nrPDB 46 1e-05 1WF3-A nrPDB 46 1e-05 3J8G-X nrPDB 46 2e-05 3GEE-A nrPDB 45 2e-05 5IMR-C nrPDB 44 4e-05 5J8B-z nrPDB 44 4e-05 5DN8-A nrPDB 44 6e-05 2Q3F-A nrPDB 43 8e-05 3LLU-A nrPDB 43 1e-04 2GTP-A nrPDB 42 1e-04 6D4G-A nrPDB 42 2e-04 6GB2-BC nrPDB 42 2e-04 2ODE-A nrPDB 42 2e-04 3CB4-D nrPDB 41 3e-04 2QAG-A nrPDB 41 3e-04 5KU1-A nrPDB 41 4e-04 3FTQ-A nrPDB 41 4e-04 6CES-C nrPDB 41 4e-04 5KSO-A nrPDB 41 4e-04 2E87-A nrPDB 40 5e-04 3C5H-A nrPDB 40 6e-04 3V00-C nrPDB 40 7e-04 3R9W-A nrPDB 40 7e-04 6D9H-A nrPDB 39 0.001 3IZY-P nrPDB 39 0.001 4DCU-A nrPDB 39 0.001 2CXX-A nrPDB 39 0.001 4V7F-o nrPDB 39 0.001 3IEU-A nrPDB 39 0.002 5YT0-A nrPDB 38 0.002 3EC1-A nrPDB 38 0.003 5KH0-A nrPDB 38 0.004 4ZKD-A nrPDB 38 0.004 5FG3-A nrPDB 38 0.004 5ZZM-A nrPDB 38 0.004 5CYO-A nrPDB 38 0.004 5G06-P nrPDB 37 0.005 3T5D-A nrPDB 37 0.006 1SHZ-A nrPDB 37 0.006 4KJZ-A nrPDB 37 0.006 4B44-A nrPDB 37 0.006 3H2Y-A nrPDB 37 0.007 1HEY-A nrPDB 36 0.008 3K53-A nrPDB 36 0.008 3J4J-A nrPDB 36 0.010 6OIK-A nrPDB 36 0.011 2QAG-C nrPDB 36 0.013 5KUT-A nrPDB 36 0.014 4WQY-BZ nrPDB 35 0.019 4YMS-J nrPDB 35 0.020 3JB9-B nrPDB 35 0.023 6OIJ-A nrPDB 35 0.025 4QJ3-A nrPDB 34 0.029 2BCJ-Q nrPDB 34 0.030 4V8Y-CP nrPDB 34 0.032 5NON-A nrPDB 34 0.033 2VNE-A nrPDB 34 0.033 4NCF-A nrPDB 34 0.042 4V8Z-CV nrPDB 34 0.044 3WBI-A nrPDB 34 0.045 4TN1-B nrPDB 34 0.052 5IRR-A nrPDB 33 0.062 4N3G-A nrPDB 33 0.063 4NCL-A nrPDB 33 0.065 2YYZ-A nrPDB 33 0.071 3PR1-A nrPDB 33 0.073 1G7S-A nrPDB 33 0.073 1IRQ-A nrPDB 33 0.080 5VAI-A nrPDB 33 0.096 6F1T-i nrPDB 33 0.11 6F1Y-j nrPDB 33 0.13 1ZCB-A nrPDB 33 0.13 1ZCA-A nrPDB 32 0.15 6HZK-A nrPDB 32 0.18 4UJC-AB nrPDB 32 0.20 5OCH-A nrPDB 32 0.20 1PUJ-A nrPDB 32 0.20 3V70-A nrPDB 32 0.21 4TLD-A nrPDB 31 0.25 2NQ2-C nrPDB 31 0.25 2IW3-A nrPDB 31 0.27 5X4B-A nrPDB 31 0.28 3S1A-A nrPDB 31 0.28 1LNZ-A nrPDB 31 0.30 4AC9-A nrPDB 31 0.30 1YE8-A nrPDB 31 0.38 4Z54-A nrPDB 31 0.45 2IYT-A nrPDB 31 0.47 4U00-A nrPDB 30 0.52 1M0T-A nrPDB 30 0.53 1SUL-A nrPDB 30 0.58 2NQL-A nrPDB 30 0.61 5C78-A nrPDB 30 0.64 6O81-S nrPDB 30 0.65 4MKI-B nrPDB 30 0.68 6FEC-S nrPDB 30 0.70 5MKK-A nrPDB 30 0.70 5IDV-A nrPDB 30 0.70 6I3O-A nrPDB 30 0.71 1R6B-X nrPDB 30 0.71 5B3F-A nrPDB 30 0.73 2YV5-A nrPDB 30 0.73 1QVR-A nrPDB 30 0.76 4KV9-A nrPDB 30 0.77 5AR1-A nrPDB 30 0.79 4V89-AW nrPDB 30 0.79 2QTH-A nrPDB 30 0.84 2P8Y-T nrPDB 30 0.84 1NI3-A nrPDB 30 0.88 5EE0-A nrPDB 29 0.89 2OHF-A nrPDB 29 0.89 2GZA-A nrPDB 29 0.93 5MRE-WW nrPDB 29 0.96 6IC4-I nrPDB 29 0.98 5OFO-C nrPDB 29 1.0 4RI0-A nrPDB 29 1.0 4HSE-A nrPDB 29 1.0 4MYH-A nrPDB 29 1.0 4CIU-A nrPDB 29 1.1 1WXQ-A nrPDB 29 1.1 1U0L-A nrPDB 29 1.2 3LLM-A nrPDB 29 1.2 4KXX-A nrPDB 29 1.2 6ED3-A nrPDB 29 1.2 5JSZ-B nrPDB 29 1.2 5D4W-A nrPDB 29 1.2 1JBK-A nrPDB 29 1.2 2BDT-A nrPDB 29 1.3 3N5F-A nrPDB 29 1.3 6H7G-A nrPDB 29 1.3 4RY2-A nrPDB 29 1.3 5VHD-D nrPDB 29 1.4 6D00-1 nrPDB 29 1.5 4N1A-A nrPDB 29 1.5 3J3U-A nrPDB 29 1.5 3PXG-A nrPDB 29 1.5 4YPL-A nrPDB 29 1.6 3PXI-A nrPDB 29 1.6 2RGK-A nrPDB 29 1.6 6G2G-A nrPDB 29 1.7 4YPN-A nrPDB 29 1.7 3B5X-A nrPDB 29 1.7 3FVQ-A nrPDB 29 1.9 3GD7-A nrPDB 29 1.9 1HXH-A nrPDB 29 2.0 2P65-A nrPDB 28 2.0 6G12-A nrPDB 28 2.1 4O0M-A nrPDB 28 2.1 5GM6-Y nrPDB 28 2.2 5M04-A nrPDB 28 2.2 4QIW-C nrPDB 28 2.2 6C2V-A nrPDB 28 2.3 5AJ2-A nrPDB 28 2.4 4MRS-A nrPDB 28 2.4 6QUZ-B nrPDB 28 2.4 2PJZ-A nrPDB 28 2.6 5ZLU-EE nrPDB 28 2.6 1IHU-A nrPDB 28 2.6 3PV0-A nrPDB 28 2.6 5ZME-A nrPDB 28 2.6 6HA8-V nrPDB 28 2.7 5JWO-A nrPDB 28 2.7 2WIC-A nrPDB 28 2.7 4CSU-9 nrPDB 28 2.8 2ZBL-A nrPDB 28 2.8 1YR7-A nrPDB 28 2.8 2GHI-A nrPDB 28 2.8 2IT1-A nrPDB 28 2.9 3DEF-A nrPDB 28 3.0 6EM8-A nrPDB 28 3.0 1JAL-A nrPDB 28 3.1 4A9A-A nrPDB 28 3.1 5LJA-A nrPDB 28 3.1 5NIK-J nrPDB 28 3.3 5B57-C nrPDB 28 3.3 2PCL-A nrPDB 28 3.4 4Q7L-A nrPDB 28 3.4 2P5T-B nrPDB 28 3.4 6EMW-E nrPDB 28 3.4 5LKM-A nrPDB 28 3.5 3VX4-A nrPDB 28 3.8 2WJG-A nrPDB 28 4.0 2GA8-A nrPDB 28 4.1 6FOC-D nrPDB 28 4.1 6FA9-A nrPDB 28 4.2 1IM2-A nrPDB 28 4.3 2OCP-A nrPDB 28 4.4 1E94-E nrPDB 28 4.4 5GKO-A nrPDB 27 4.4 4HZI-A nrPDB 27 4.4 2QU8-A nrPDB 27 4.4 1OFI-A nrPDB 27 4.5 2XTZ-A nrPDB 27 4.5 1H65-A nrPDB 27 4.7 1IY1-A nrPDB 27 4.7 5DO7-A nrPDB 27 4.8 5D0U-A nrPDB 27 4.9 1EZ4-A nrPDB 27 4.9 4HUQ-A nrPDB 27 5.0 2DHR-A nrPDB 27 5.1 3L43-A nrPDB 27 5.2 4UUD-B nrPDB 27 5.2 2AKA-B nrPDB 27 5.2 5H7J-A nrPDB 27 5.2 2D62-A nrPDB 27 5.2 2X2E-A nrPDB 27 5.6 4XGC-E nrPDB 27 5.7 4WIA-A nrPDB 27 5.7 4FID-A nrPDB 27 5.7 5I8Q-A nrPDB 27 5.8 6QUZ-A nrPDB 27 5.8 2QAG-B nrPDB 27 5.9 1Z6G-A nrPDB 27 5.9 2OUK-A nrPDB 27 6.0 4Q7K-A nrPDB 27 6.0 6BZR-B nrPDB 27 6.3 6FKI-F nrPDB 27 6.5 4F4J-A nrPDB 27 6.5 4C3Z-A nrPDB 27 6.5 3WMF-A nrPDB 27 6.5 2W6I-D nrPDB 27 6.5 2ONJ-A nrPDB 27 6.5 2CBZ-A nrPDB 27 6.5 4R98-A nrPDB 27 6.5 3D0O-A nrPDB 27 6.7 5A3F-A nrPDB 27 6.7 5H7K-A nrPDB 27 6.8 1WDT-A nrPDB 27 6.8 5IK2-D nrPDB 27 7.0 5CDF-E nrPDB 27 7.1 5A9Z-CA nrPDB 27 7.1 2XND-D nrPDB 27 7.1 2R6F-A nrPDB 27 7.2 1IQP-A nrPDB 27 7.3 6DLV-b nrPDB 27 7.3 3EPJ-A nrPDB 27 7.3 1TAG-A nrPDB 27 7.3 3UX8-A nrPDB 27 7.4 6DJQ-A nrPDB 26 7.5 3KAO-A nrPDB 26 7.8 4A2I-V nrPDB 26 8.0 4XRP-A nrPDB 26 8.2 5XU1-A nrPDB 26 8.4 5CA8-A nrPDB 26 8.4 4NP6-A nrPDB 26 8.4 3OZX-A nrPDB 26 8.4 1T9H-A nrPDB 26 8.4 5NO4-Z nrPDB 26 8.5 2ZBK-A nrPDB 26 8.5 6AMN-A nrPDB 26 8.7 5FM7-A nrPDB 26 9.1 4XD7-D nrPDB 26 9.4 2YKR-W nrPDB 26 9.4 5VY8-A nrPDB 26 9.6 2I3B-A nrPDB 26 9.6 4XIG-S nrPDB 26 9.7 >2FV8-A nrPDB Length = 207 Score = 284 bits (726), Expect = 2e-77, Method: Composition-based stats. Identities = 184/186 (98%), Positives = 185/186 (99%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 + IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA Sbjct: 22 SMIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 81 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDL 121 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDL Sbjct: 82 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDL 141 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK Sbjct: 142 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 201 Query: 182 RYGSQN 187 RYGSQN Sbjct: 202 RYGSQN 207 >5C2K-A nrPDB Length = 415 Score = 281 bits (719), Expect = 1e-76, Method: Composition-based stats. Identities = 163/191 (85%), Positives = 177/191 (92%), Gaps = 1/191 (0%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 MAAIRKKLV+VGDGACGKTCLLIVFSKD+FPEVYVPTVFENYVADIEVDGKQVELALWDT Sbjct: 8 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 67 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKD 120 AGQEDYDRLRPLSYPDTDVILMCFS+DSPDSLENIPEKW PEVKHFCPNVPIILV NKKD Sbjct: 68 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 127 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 LR+DEH R ELA+MKQEPV+ ++GR MA RI A+ Y+ECSAKTK+GVREVFE ATRAALQ Sbjct: 128 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 187 Query: 181 KRYG-SQNGCI 190 R G ++GC+ Sbjct: 188 ARRGKKKSGCL 198 >5ZHX-e nrPDB Length = 198 Score = 279 bits (715), Expect = 5e-76, Method: Composition-based stats. Identities = 163/191 (85%), Positives = 177/191 (92%), Gaps = 1/191 (0%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 MAAIRKKLV+VGDGACGKTCLLIVFSKD+FPEVYVPTVFENYVADIEVDGKQVELALWDT Sbjct: 6 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 65 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKD 120 AGQEDYDRLRPLSYPDTDVILMCFS+DSPDSLENIPEKW PEVKHFCPNVPIILV NKKD Sbjct: 66 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 125 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 LR+DEH R ELA+MKQEPV+ ++GR MA RI A+ Y+ECSAKTK+GVREVFE ATRAALQ Sbjct: 126 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 185 Query: 181 KRYG-SQNGCI 190 R G ++GC+ Sbjct: 186 ARRGKKKSGCL 196 >5JCP-B nrPDB Length = 419 Score = 265 bits (678), Expect = 9e-72, Method: Composition-based stats. Identities = 157/179 (87%), Positives = 168/179 (93%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 AAIRKKLV+VGDGACGKTCLLIV SKD+FPEVYVPTVFENYVADIEVDGKQVELALWDTA Sbjct: 240 AAIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 299 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDL 121 GQEDYDRLRPLSYPDTDVILMCFS+DSPDSLENIPEKW PEVKHFCPNVPIILV NKKDL Sbjct: 300 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 359 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 R+DEH R ELA+MKQEPV+ ++GR MA RI A+ Y+ECSAKTK+GVREVFE ATRAALQ Sbjct: 360 RNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 418 >5ZVP-A nrPDB Length = 181 Score = 242 bits (619), Expect = 6e-65, Method: Composition-based stats. Identities = 129/179 (72%), Positives = 146/179 (81%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 MA IR+KLV+VGDGACGKTCLLIV SK FPEVYVPTVFENYVAD+EVDGK VELALWDT Sbjct: 1 MAEIRRKLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDT 60 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKD 120 AGQEDYDRLRPLSYPD+ VIL+CF++DSPDSL+N+ EKW+ EV HFC +PIILV KKD Sbjct: 61 AGQEDYDRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKD 120 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 LR D EL + Q+PV + G + +I AY YLECSA+T EGVREVFE ATRAAL Sbjct: 121 LRHDPKTIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAAL 179 >3TH5-A nrPDB Length = 204 Score = 240 bits (614), Expect = 2e-64, Method: Composition-based stats. Identities = 104/173 (60%), Positives = 122/173 (70%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K VVVGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDTAGQEDY Sbjct: 32 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 91 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 DRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CPN PIILV K DLR D+ Sbjct: 92 DRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKD 151 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 +L K P+ G AMA I A YLECSA T+ G++ VF+ A RA L Sbjct: 152 TIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 204 >3A58-B nrPDB Length = 188 Score = 239 bits (611), Expect = 5e-64, Method: Composition-based stats. Identities = 123/180 (68%), Positives = 149/180 (82%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 62 +IR+KLV+VGDGACGKTCLLIV SK +FPEVYVPTVFENYVAD+EVDG++VELALWDTAG Sbjct: 8 SIRRKLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAG 67 Query: 63 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLR 122 QEDYDRLRPLSYPD++V+L+CFS+D PDSLEN+ EKW+ EV HFC VPIILV K DLR Sbjct: 68 QEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLR 127 Query: 123 SDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 182 +D +L + Q+PV + +G+++A +I A Y ECSAKT GVREVFE ATRA+L + Sbjct: 128 NDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGK 187 >3RYT-C nrPDB Length = 180 Score = 238 bits (607), Expect = 1e-63, Method: Composition-based stats. Identities = 103/173 (59%), Positives = 121/173 (69%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K VVVGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDTAG EDY Sbjct: 8 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGLEDY 67 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 DRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CPN PIILV K DLR D+ Sbjct: 68 DRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKD 127 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 +L K P+ G AMA I A YLECSA T+ G++ VF+ A RA L Sbjct: 128 TIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 180 >2NTY-C nrPDB Length = 180 Score = 233 bits (594), Expect = 4e-62, Method: Composition-based stats. Identities = 89/181 (49%), Positives = 121/181 (66%), Gaps = 3/181 (1%) Query: 1 MAAIRK-KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWD 59 M+A R K V VGDGA GKTC+LI ++ + FP YVPTVF+N+ A++ VDG V L LWD Sbjct: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKK 119 TAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW+PE++H+ P VPIILV K Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120 Query: 120 DLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 DLR D+ + P+ T+ G + I + Y+ECS+KT++ V+ VF+ A + L Sbjct: 121 DLRDDKQFFID--HPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVL 178 Query: 180 Q 180 Q Sbjct: 179 Q 179 >2J1L-A nrPDB Length = 214 Score = 232 bits (593), Expect = 6e-62, Method: Composition-based stats. Identities = 95/176 (53%), Positives = 119/176 (67%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K+V+VGDG CGKT LL+VF+ FPE Y PTVFE Y+ +++V GK V L +WDTAGQ+DY Sbjct: 36 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 95 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 DRLRPL YPD V+L+CF V SP+S +NI +W PEV HFC VPII+V K DLR D+ Sbjct: 96 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLRKDKS 155 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 182 + +L R EPV G+ MA + A YLECSA+ + V VF+ A AL R Sbjct: 156 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVALSSR 211 >3BWD-D nrPDB Length = 182 Score = 232 bits (593), Expect = 6e-62, Method: Composition-based stats. Identities = 91/181 (50%), Positives = 120/181 (66%), Gaps = 3/181 (1%) Query: 1 MAAIRK-KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWD 59 M+A R K V VGDGA GKTCLLI ++ + FP YVPTVF+N+ A++ V+G V L LWD Sbjct: 3 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 62 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKK 119 TAGQEDY+RLRPLSY DV ++ FS+ S S EN+ +KW+PE+KH+ P VPI+LV K Sbjct: 63 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 122 Query: 120 DLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 DLR D+ + P+ T G + I A Y+ECS+K++E V+ VF+ A R L Sbjct: 123 DLRDDKQFFID--HPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVL 180 Query: 180 Q 180 Q Sbjct: 181 Q 181 >2WKQ-A nrPDB Length = 332 Score = 232 bits (593), Expect = 6e-62, Method: Composition-based stats. Identities = 101/173 (58%), Positives = 120/173 (69%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K VVVGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDTAG EDY Sbjct: 157 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGLEDY 216 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 DRLRPLSYP TDV L+CFS+ SP S ++ KW PEV+H CPN PIILV K DLR D+ Sbjct: 217 DRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKD 276 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 +L K P+ G AMA I A YLECSA T+ G++ VF+ A RA L Sbjct: 277 TIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 329 >2WBL-C nrPDB Length = 180 Score = 232 bits (592), Expect = 8e-62, Method: Composition-based stats. Identities = 92/181 (50%), Positives = 120/181 (66%), Gaps = 3/181 (1%) Query: 1 MAAIRK-KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWD 59 M+ R K V VGDGA GKTC+LI ++ + FP YVPTVF+N+ A++ VDG V L LWD Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKK 119 TAGQEDY+RLRPLSY DV L+ FS+ S S ENI +KW+PE+KH+ P +PI+LV K Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKL 120 Query: 120 DLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 DLR D+ + + T G + I A YLECS+KT++ V+ VF+TA R AL Sbjct: 121 DLRDDKQFLKD--HPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVAL 178 Query: 180 Q 180 + Sbjct: 179 R 179 >2W2X-A nrPDB Length = 185 Score = 230 bits (588), Expect = 2e-61, Method: Composition-based stats. Identities = 99/173 (57%), Positives = 120/173 (69%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K VVVGD A GKTCLLI ++ + FP Y+PTVF+NY A++ VD K V L LWDTAGQEDY Sbjct: 11 KCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDY 70 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 DRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CP+ PIILV K DLR D+ Sbjct: 71 DRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLRDDKD 130 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 +L K P+ G A+A I + YLECSA T+ G++ VF+ A RA L Sbjct: 131 TIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVL 183 >1RYH-A nrPDB Length = 203 Score = 230 bits (586), Expect = 3e-61, Method: Composition-based stats. Identities = 103/192 (53%), Positives = 121/192 (63%), Gaps = 19/192 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K VVVGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDTAGQEDY Sbjct: 7 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 66 Query: 67 DRLRPLSYPD-------------------TDVILMCFSVDSPDSLENIPEKWVPEVKHFC 107 DRLRPLSYP DV L+CFS+ SP S EN+ KW PEV+H C Sbjct: 67 DRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEVRHHC 126 Query: 108 PNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGV 167 PN PIILV K DLR D+ +L K P+ G AMA I A YLECSA T+ G+ Sbjct: 127 PNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGL 186 Query: 168 REVFETATRAAL 179 + VF+ A RA L Sbjct: 187 KTVFDEAIRAVL 198 >2ATX-A nrPDB Length = 194 Score = 228 bits (582), Expect = 1e-60, Method: Composition-based stats. Identities = 95/178 (53%), Positives = 125/178 (70%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 A+ K VVVGDGA GKTCLL+ ++ D FPE YVPTVF++Y + V GKQ L L+DTA Sbjct: 15 GALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTA 74 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDL 121 GQEDYDRLRPLSYP TDV L+CFSV +P S +N+ E+WVPE+K + PNVP +L+ + DL Sbjct: 75 GQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDL 134 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 R D L MK++P+ + G+ +A I A Y+ECSA T++G++ VF+ A A L Sbjct: 135 RDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAIL 192 >2J0V-A nrPDB Length = 212 Score = 225 bits (575), Expect = 7e-60, Method: Composition-based stats. Identities = 84/180 (46%), Positives = 120/180 (66%), Gaps = 4/180 (2%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V VGDGA GKTC+LI ++ ++FP Y+PTVF+N+ A++ VDG+ V L LWDTAGQEDY Sbjct: 11 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWDTAGQEDY 70 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 RLRPLSY D+ ++ FS+ S S EN+ +KW+PE++ F PNVPI+LV K DLR D+ Sbjct: 71 SRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRDDKG 130 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRYGSQ 186 + + + + G + +I A Y+ECS+KT++ V+ VF+TA + LQ + Sbjct: 131 YLADHTNV----ITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKE 186 >3VHL-B nrPDB Length = 195 Score = 225 bits (574), Expect = 9e-60, Method: Composition-based stats. Identities = 93/179 (51%), Positives = 122/179 (68%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 K VVVGDGA GK CLLI ++ ++FP YVPTVF+NY + + G+ L L+DTA Sbjct: 7 GMQTIKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 66 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDL 121 GQEDYDRLRPLSYP TDV L+CFSV SP S EN+ EKWVPE+ H CP P +LV + DL Sbjct: 67 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDL 126 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 R D +LA+ KQ+P+ + +A ++A Y+ECSA T++G++ VF+ A AAL+ Sbjct: 127 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 185 >4U5X-A nrPDB Length = 178 Score = 222 bits (566), Expect = 8e-59, Method: Composition-based stats. Identities = 82/174 (47%), Positives = 113/174 (64%), Gaps = 2/174 (1%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V VGDGA GKTC+LI ++ ++FP Y+PTVF+N+ A++ VDG V L LWDTAG EDY Sbjct: 7 KCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGLEDY 66 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 RLRPLSY DV ++ FS+ S S EN+ +KW+PE++ F P VP++LV K DLR D Sbjct: 67 SRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLREDRA 126 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 + + T+ G + I A Y+ECS+KT+ ++ VF+TA + LQ Sbjct: 127 YLAD--HPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 178 >5VCU-A nrPDB Length = 208 Score = 221 bits (564), Expect = 1e-58, Method: Composition-based stats. Identities = 97/178 (54%), Positives = 122/178 (68%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K VVVGDGA GKT LLI +S FPE YVPTVF+NY +I V +AL+DTAGQEDY Sbjct: 13 KCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYNKNIPYGDGIVSIALYDTAGQEDY 72 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 DRLRPLSYPDTDV L+CFS+++P+SLEN KW E+KH+ P+ PI+LV K DL+ DE Sbjct: 73 DRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHYNPDTPIVLVGTKLDLKKDEE 132 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRYG 184 +L K PV T+ G+ M +I+A Y+ECSAKT E + E F A A+++R Sbjct: 133 YVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAMKQRLK 190 >2Q3H-A nrPDB Length = 201 Score = 221 bits (564), Expect = 1e-58, Method: Composition-based stats. Identities = 85/180 (47%), Positives = 123/180 (68%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V+VGDGA GKT L++ ++ + +P Y+PT F+N+ A + VDG+ V L L DTAGQ+++ Sbjct: 22 KCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDEF 81 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 D+LRPL Y +TD+ L+CFSV SP S +N+ EKWVPE++ CP PIILV + DLR D Sbjct: 82 DKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDVK 141 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRYGSQ 186 V EL + K++PV + + +A I+A Y+ECSA T++ ++EVF+ A A +Q Q Sbjct: 142 VLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFDAAIVAGIQYSDTQQ 201 >4MIT-A nrPDB Length = 186 Score = 213 bits (544), Expect = 3e-56, Method: Composition-based stats. Identities = 90/178 (50%), Positives = 114/178 (64%) Query: 4 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 KLVVVGDGA GKTCLLI +S +FPE Y+PTVF+NYV + +Q++LALWDTAG Sbjct: 9 TSIKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTAGTRQIQLALWDTAGL 68 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRS 123 E+YD+LRPLSY + L+CFSV S S +N+ KW PEV HF P VPIILV K D R+ Sbjct: 69 EEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVGTKLDTRN 128 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 D + L + T G + RI+A Y+ECSAKT E ++ VF+ A + L Sbjct: 129 DPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAVKTVLMN 186 >1GWN-A nrPDB Length = 205 Score = 210 bits (534), Expect = 4e-55, Method: Composition-based stats. Identities = 91/179 (50%), Positives = 124/179 (69%), Gaps = 1/179 (0%) Query: 4 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 ++ K+VVVGD CGKT LL VF+KD FPE YVPTVFENY A E+D +++EL+LWDT+G Sbjct: 27 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGS 86 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRS 123 YD +RPLSYPD+D +L+CF + P++L+++ +KW E++ FCPN ++LV K DLR+ Sbjct: 87 PYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRT 146 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEG-VREVFETATRAALQK 181 D EL+ +Q PV D G MA +I A Y+ECSA E VR++F AT A + K Sbjct: 147 DVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNK 205 >1M7B-A nrPDB Length = 184 Score = 207 bits (528), Expect = 2e-54, Method: Composition-based stats. Identities = 91/179 (50%), Positives = 124/179 (69%), Gaps = 1/179 (0%) Query: 4 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 ++ K+VVVGD CGKT LL VF+KD FPE YVPTVFENY A E+D +++EL+LWDT+G Sbjct: 6 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGS 65 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRS 123 YD +RPLSYPD+D +L+CF + P++L+++ +KW E++ FCPN ++LV K DLR+ Sbjct: 66 PYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRT 125 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEG-VREVFETATRAALQK 181 D EL+ +Q PV D G MA +I A Y+ECSA E VR++F AT A + K Sbjct: 126 DVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNK 184 >5SZH-B nrPDB Length = 203 Score = 206 bits (525), Expect = 4e-54, Method: Composition-based stats. Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 17/181 (9%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ + IE+DGK ++L +WDTAGQE Sbjct: 11 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRS 123 + + Y I++ + V +S N+ ++W+ E+ + NV +LV NK DL + Sbjct: 71 RFRTITSSYYRGAHGIIVVYDVTDQESYANV-KQWLQEIDRYASENVNKLLVGNKSDLTT 129 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRY 183 + V A+ + + +LE SAK V + F T +KR Sbjct: 130 KKVVDNTTAKEFADSL-------------GIPFLETSAKNATNVEQAFMTMAAEI-KKRM 175 Query: 184 G 184 G Sbjct: 176 G 176 >2RHD-A nrPDB Length = 175 Score = 206 bits (524), Expect = 6e-54, Method: Composition-based stats. Identities = 53/178 (29%), Positives = 91/178 (51%), Gaps = 16/178 (8%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KL+++GD GK+CLL+ F+ D + + Y+ T+ ++ + I ++ K V+L +WDTAGQE Sbjct: 10 FKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQE 69 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRS 123 + + Y I++ + V DS +N+ ++W+ E+ + NV +LV NK DL S Sbjct: 70 RFRTITSSYYRGAHGIIIVYDVTDRDSFDNV-KQWIQEIDRYAMENVNKLLVGNKCDLVS 128 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 V +D+GR +A ++E SAK V + F T ++ Sbjct: 129 KRV------------VTSDEGRELADS-HGIKFIETSAKNAYNVEQAFHTMAGEIKKR 173 >3L0I-B nrPDB Length = 199 Score = 205 bits (521), Expect = 1e-53, Method: Composition-based stats. Identities = 55/181 (30%), Positives = 92/181 (50%), Gaps = 17/181 (9%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ + IE+DGK ++L +WDTAGQE Sbjct: 34 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 93 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRS 123 + + Y I++ + V +S N+ ++W+ E+ + NV +LV NK DL + Sbjct: 94 RFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGNKCDLTT 152 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRY 183 + V A+ + + +LE SAK V + F T +KR Sbjct: 153 KKVVDYTTAKEFADSL-------------GIPFLETSAKNATNVEQSFMTMAAEI-KKRM 198 Query: 184 G 184 G Sbjct: 199 G 199 >3CUE-F nrPDB Length = 206 Score = 200 bits (508), Expect = 4e-52, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 90/184 (48%), Gaps = 17/184 (9%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KL+++G+ GK+CLL+ FS D + Y+ T+ ++ + +E+DGK V+L +WDTAGQE Sbjct: 9 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 68 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPI-ILVANKKDLRS 123 + + Y + I++ + V +S + + W+ E+ + + + +LV NK DL+ Sbjct: 69 RFRTITSSYYRGSHGIIIVYDVTDQESFNGV-KMWLQEIDRYATSTVLKLLVGNKCDLKD 127 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRY 183 V ++A+ + +LE SA V + F T R ++ Sbjct: 128 KRVVEYDVAKEFADA-------------NKMPFLETSALDSTNVEDAFLTMARQI-KESM 173 Query: 184 GSQN 187 QN Sbjct: 174 SQQN 177 >5SZI-A nrPDB Length = 209 Score = 200 bits (508), Expect = 4e-52, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 16/185 (8%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KL+++GD GKTC+L FS+D F ++ T+ ++ + IE+DGK+++L +WDTAGQE Sbjct: 11 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRS 123 + + Y I++ + + + S +NI W+ + +H +V +++ NK D+ Sbjct: 71 RFRTITTAYYRGAMGIMLVYDITNEKSFDNI-RNWIRNIEEHASADVEKMILGNKCDVND 129 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRY 183 V + G +A+ ++E SAK V F T R K Sbjct: 130 KRQ------------VSKERGEKLALD-YGIKFMETSAKANINVENAFFTLARDIKAKMD 176 Query: 184 GSQNG 188 G Sbjct: 177 KKLEG 181 >4LHX-A nrPDB Length = 186 Score = 199 bits (507), Expect = 6e-52, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 16/185 (8%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KL+++GD GKTC+L FS+D F ++ T+ ++ + IE+DGK+++L +WDTAGQE Sbjct: 11 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRS 123 + + Y I++ + + + S +NI W+ + +H +V +++ NK D+ Sbjct: 71 RFRTITTAYYRGAMGIMLVYDITNEKSFDNI-RNWIRNIEEHASADVEKMILGNKCDVND 129 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRY 183 V + G +A+ ++E SAK V F T R K Sbjct: 130 KRQ------------VSKERGEKLALD-YGIKFMETSAKANINVENAFFTLARDIKAKMD 176 Query: 184 GSQNG 188 G Sbjct: 177 KKLEG 181 >1YZN-A nrPDB Length = 185 Score = 199 bits (506), Expect = 7e-52, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 16/177 (9%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KL+++G+ GK+CLL+ FS D + Y+ T+ ++ + +E+DGK V+L +WDTAGQE Sbjct: 22 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 81 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPI-ILVANKKDLRS 123 + + Y + I++ + V +S + + W+ E+ + + + +LV NK DL+ Sbjct: 82 RFRTITSSYYRGSHGIIIVYDVTDQESFNGV-KMWLQEIDRYATSTVLKLLVGNKCDLKD 140 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 V ++A+ + +LE SA V + F T R + Sbjct: 141 KRVVEYDVAKEFADA-------------NKMPFLETSALDSTNVEDAFLTMARQIKE 184 >1Z0A-A nrPDB Length = 174 Score = 199 bits (506), Expect = 7e-52, Method: Composition-based stats. Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 16/178 (8%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K +++GD GK+CLL+ F+ F V+ T+ + I +DGKQ++L +WDTAGQE Sbjct: 11 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRS 123 + + Y L+ + + D+ N W+ + + H N+ I+L+ NK DL S Sbjct: 71 SFRSITRSYYRGAAGALLVYDITRRDTF-NHLTTWLEDARQHSNSNMVIMLIGNKSDLES 129 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 V+ ++G A A ++E SAKT V E F + +K Sbjct: 130 RR------------EVKKEEGEAFARE-HGLIFMETSAKTASNVEEAFINTAKEIYEK 174 >2WWX-A nrPDB Length = 175 Score = 198 bits (505), Expect = 1e-51, Method: Composition-based stats. Identities = 54/181 (29%), Positives = 91/181 (50%), Gaps = 17/181 (9%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ + IE+DGK ++L +WDTAGQE Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRS 123 + + Y I++ + V +S N+ ++W+ E+ + NV +LV K DL + Sbjct: 69 RFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGIKCDLTT 127 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRY 183 + V A+ + + +LE SAK V + F T +KR Sbjct: 128 KKVVDYTTAKEFADSL-------------GIPFLETSAKNATNVEQSFMTMAAEI-KKRM 173 Query: 184 G 184 G Sbjct: 174 G 174 >5SZJ-A nrPDB Length = 202 Score = 198 bits (505), Expect = 1e-51, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 16/181 (8%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTA 61 + KL+++GD GKTC+L FS D F ++ T+ ++ + +E+ GK+++L +WDTA Sbjct: 9 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 68 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKD 120 GQE + + Y I++ + + + S ENI KW+ + +H +V +L+ NK D Sbjct: 69 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCD 127 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 + V G +A + E SAK + + F T L+ Sbjct: 128 MDDKRV------------VPKGKGEQIARE-HGIRFFETSAKANINIEKAFLTLAEDILR 174 Query: 181 K 181 K Sbjct: 175 K 175 >2A5J-A nrPDB Length = 191 Score = 198 bits (504), Expect = 1e-51, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 16/182 (8%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDT 60 + K +++GD GK+CLL+ F+ F V+ T+ + + +DGKQ++L +WDT Sbjct: 18 GSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 77 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKK 119 AGQE + + Y L+ + + ++ N W+ + + H N+ I+L+ NK Sbjct: 78 AGQESFRSITRSYYRGAAGALLVYDITRRETF-NHLTSWLEDARQHSSSNMVIMLIGNKS 136 Query: 120 DLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 DL S V+ ++G A A ++E SAKT V E F + Sbjct: 137 DLESRR------------DVKREEGEAFARE-HGLIFMETSAKTACNVEEAFINTAKEIY 183 Query: 180 QK 181 +K Sbjct: 184 RK 185 >5LPN-A nrPDB Length = 177 Score = 198 bits (503), Expect = 2e-51, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 16/181 (8%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTA 61 + KL+++GD GKTC+L FS D F ++ T+ ++ + +E+ GK+++L +WDTA Sbjct: 9 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 68 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKD 120 GQE + + Y I++ + + + S ENI KW+ + +H +V +L+ NK D Sbjct: 69 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCD 127 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 + V G +A + E SAK + + F T L+ Sbjct: 128 MDDKRV------------VPKGKGEQIARE-HGIRFFETSAKANINIEKAFLTLAEDILR 174 Query: 181 K 181 K Sbjct: 175 K 175 >3CPH-A nrPDB Length = 213 Score = 198 bits (503), Expect = 2e-51, Method: Composition-based stats. Identities = 51/177 (28%), Positives = 92/177 (51%), Gaps = 17/177 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 K++++GD GK+CLL+ F +D+F ++ T+ ++ + ++++GK+V+L LWDTAGQE Sbjct: 22 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 81 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSD 124 + + Y I++ + V + NI ++W V +H ++LV NK D+ + Sbjct: 82 FRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDMET- 139 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 V D G A+A + ++E SAK + V E+F T + +K Sbjct: 140 ------------RVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQEK 183 >5FBL-B nrPDB Length = 221 Score = 197 bits (502), Expect = 2e-51, Method: Composition-based stats. Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 16/183 (8%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K+V++GD GK+ LL F+++EF T+ + I+VDGK ++ +WDTAGQE Sbjct: 17 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 76 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRS 123 Y + Y L+ + + + EN+ E+W+ E++ H N+ I+LV NK DLR Sbjct: 77 RYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLRH 135 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRY 183 V TD+ RA A + ++E SA V F+T + Sbjct: 136 LR------------AVPTDEARAFAEK-NGLSFIETSALDSTNVEAAFQTILTEIYRIVS 182 Query: 184 GSQ 186 Q Sbjct: 183 QKQ 185 >4QXA-A nrPDB Length = 208 Score = 197 bits (501), Expect = 3e-51, Method: Composition-based stats. Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 20/180 (11%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQE 64 K++++GDG GK+ L+ + ++F T+ ++ D+EVDG V + +WDTAG E Sbjct: 9 FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGLE 68 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-----PNVPIILVANKK 119 + LR Y +D L+ FSVD S +N+ W E ++ + P +++ NK Sbjct: 69 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESFPFVILGNKT 127 Query: 120 DLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 D+ K+ V T++ +A Y Y E SAK V FE A R L Sbjct: 128 DI-------------KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRIL 174 >1WMS-A nrPDB Length = 177 Score = 196 bits (500), Expect = 3e-51, Method: Composition-based stats. Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 20/180 (11%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQE 64 K++++GDG GK+ L+ + ++F T+ ++ D+EVDG V + +WDTAGQE Sbjct: 8 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 67 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-----PNVPIILVANKK 119 + LR Y +D L+ FSVD S +N+ W E ++ + P +++ NK Sbjct: 68 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESFPFVILGNKI 126 Query: 120 DLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 D+ + V T++ +A Y Y E SAK V FE A R L Sbjct: 127 DIS-------------ERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 173 >6O62-A nrPDB Length = 184 Score = 196 bits (500), Expect = 3e-51, Method: Composition-based stats. Identities = 55/183 (30%), Positives = 93/183 (50%), Gaps = 17/183 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 KL++VGD GK+CLL+ F +D+F ++ T+ ++ + IE GK+++L +WDTAGQE Sbjct: 16 KLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQER 75 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSD 124 + + Y I++ + V S EN+ E W V +H + I LV NK D Sbjct: 76 FRTITTAYYRGAMGIVLIYDVTDSRSFENV-ENWFQTVTQHANEDAQIFLVGNKCD---- 130 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRYG 184 V + G+ +A ++ +LE SAK+ E V +F + +Q+++ Sbjct: 131 --------DEVNRQVSKEQGQELAAKLN-VPFLEASAKSNENVDSIFYELA-SIIQEKHV 180 Query: 185 SQN 187 +N Sbjct: 181 EEN 183 >2OCY-C nrPDB Length = 170 Score = 196 bits (498), Expect = 6e-51, Method: Composition-based stats. Identities = 51/177 (28%), Positives = 92/177 (51%), Gaps = 17/177 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 65 K++++GD GK+CLL+ F +D+F ++ T+ ++ + ++++GK+V+L LWDTAGQE Sbjct: 5 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQER 64 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSD 124 + + Y I++ + V + NI ++W V +H ++LV NK D+ + Sbjct: 65 FRTITTAYYRGAMGIILVYDVTDERTFTNI-KQWFKTVNEHANDEAQLLLVGNKSDMET- 122 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 V D G A+A + ++E SAK + V E+F T + +K Sbjct: 123 ------------RVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQEK 166 >2OCB-A nrPDB Length = 180 Score = 195 bits (496), Expect = 1e-50, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 86/183 (46%), Gaps = 20/183 (10%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQVELALWDTA 61 ++ K++++GDG GK+ L+ + ++F T+ ++ D+EVDG+ V L +WDTA Sbjct: 5 SLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTA 64 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-----PNVPIILVA 116 GQE + LR Y D L+ FSVD S EN+ W E ++ + P +++ Sbjct: 65 GQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLG-NWQKEFIYYADVKDPEHFPFVVLG 123 Query: 117 NKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 NK D V T++ + + Y YLE SAK V FE A R Sbjct: 124 NKVDKED-------------RQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVR 170 Query: 177 AAL 179 L Sbjct: 171 QVL 173 >2F9L-A nrPDB Length = 199 Score = 195 bits (496), Expect = 1e-50, Method: Composition-based stats. Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 16/188 (8%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWD 59 M K+V++GD GK+ LL F+++EF T+ + I+VDGK ++ +WD Sbjct: 1 MYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 60 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANK 118 TAGQE Y R+ Y L+ + + + EN+ E+W+ E++ H N+ I+LV NK Sbjct: 61 TAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNK 119 Query: 119 KDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAA 178 DLR V TD+ RA A + ++E SA V E F+ Sbjct: 120 SDLRHLR------------AVPTDEARAFAEK-NNLSFIETSALDSTNVEEAFKNILTEI 166 Query: 179 LQKRYGSQ 186 + Q Sbjct: 167 YRIVSQKQ 174 >4G01-B nrPDB Length = 181 Score = 195 bits (495), Expect = 2e-50, Method: Composition-based stats. Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 16/176 (9%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFE-NYVADIEVDGKQVELALWDTA 61 +I KLV++GD GK+ L++ F KD+F E T+ + + V+ V+ +WDTA Sbjct: 10 SINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTA 69 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHF-CPNVPIILVANKKD 120 GQE Y L P+ Y ++ F V + S E +KWV E++ PN+ + L NK D Sbjct: 70 GQERYHSLAPMYYRGAAAAIIVFDVTNQASFERA-KKWVQELQAQGNPNMVMALAGNKSD 128 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 L V E A+ + ++E SAKT V+E+F R Sbjct: 129 LLDARKVTAEDAQTYAQE-------------NGLFFMETSAKTATNVKEIFYEIAR 171 >1ZBD-A nrPDB Length = 203 Score = 194 bits (494), Expect = 2e-50, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 16/183 (8%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWD 59 M K++++G+ + GKT L ++ D F +V TV ++ V I + K+++L +WD Sbjct: 4 MFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWD 63 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANK 118 TAG E Y + Y ++ + + + +S N + W ++K + N ++LV NK Sbjct: 64 TAGLERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNK 122 Query: 119 KDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAA 178 D+ + V ++ GR +A + +++ E SAK V++ FE Sbjct: 123 CDMEDERV------------VSSERGRQLADHLG-FEFFEASAKDNINVKQTFERLVDVI 169 Query: 179 LQK 181 +K Sbjct: 170 CEK 172 >2GF9-A nrPDB Length = 189 Score = 194 bits (493), Expect = 2e-50, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 16/182 (8%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDT 60 + KL+++G+ + GKT L ++ D F +V TV ++ V + K+++L +WDT Sbjct: 19 SDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDT 78 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKK 119 AGQE Y + Y L+ + + + +S + + W ++K + N +ILV NK Sbjct: 79 AGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQD-WATQIKTYSWDNAQVILVGNKC 137 Query: 120 DLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 DL + V +DGR +A + +++ E SAK V++VFE Sbjct: 138 DLEDERV------------VPAEDGRRLADDLG-FEFFEASAKENINVKQVFERLVDVIC 184 Query: 180 QK 181 +K Sbjct: 185 EK 186 >1Z0F-A nrPDB Length = 179 Score = 193 bits (492), Expect = 3e-50, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 16/178 (8%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K +++GD GK+CLL F++ +F T+ + IEV G++++L +WDTAGQE Sbjct: 16 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 75 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRS 123 + + Y LM + + + ++ W+ + ++ PN IIL+ NK DL + Sbjct: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSS-WLTDARNLTNPNTVIILIGNKADLEA 134 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 V E A+ E +LE SAKT E V + F A + Q Sbjct: 135 QRDVTYEEAKQFAEE-------------NGLLFLEASAKTGENVEDAFLEAAKKIYQN 179 >4M8N-E nrPDB Length = 199 Score = 193 bits (490), Expect = 5e-50, Method: Composition-based stats. Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 13/175 (7%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 KLVV+G G GK+ L + F + F E Y PT+ ++Y +EVD +Q L + DTAG E Sbjct: 6 EYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTE 65 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRS 123 + +R L + + +S+ + + ++ + ++ +VP+ILV NK DL Sbjct: 66 QFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLED 125 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAA 178 + V + G+ +A + +LE SAK+K V E+F R Sbjct: 126 ERV------------VGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 168 >6IF2-B nrPDB Length = 186 Score = 193 bits (490), Expect = 5e-50, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 15/178 (8%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 KL+++GD GK+ LL+ F+ + F Y+ T+ ++ + +E++G++V+L +WDTAG E Sbjct: 15 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGLE 74 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSD 124 + + Y T +++ + V S +S N+ ++W+ E+ C +V ILV NK D Sbjct: 75 RFRTITSTYYRGTHGVIVVYDVTSAESFVNV-KRWLHEINQNCDDVCRILVGNKND---- 129 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 182 +++ V T+D A ++ E SAK V E+F T L+ + Sbjct: 130 --------DPERKVVETEDAYKFAGQMG-IQLFETSAKENVNVEEMFNCITELVLRAK 178 >3CPJ-B nrPDB Length = 223 Score = 192 bits (489), Expect = 6e-50, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 81/186 (43%), Gaps = 16/186 (8%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTA 61 + K+V++GD GK+ LL F+K+EF T+ + +E++GK+++ +WDTA Sbjct: 11 DLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTA 70 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKD 120 GQE Y + Y L+ + + S EN W+ E++ NV + L+ NK D Sbjct: 71 GQERYRAITSAYYRGAVGALIVYDISKSSSYENC-NHWLSELRENADDNVAVGLIGNKSD 129 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 L V TE ++ + + E SA E V + FE Q Sbjct: 130 LAHLRAVPTEESKTFAQE-------------NQLLFTETSALNSENVDKAFEELINTIYQ 176 Query: 181 KRYGSQ 186 K Q Sbjct: 177 KVSKHQ 182 >1X3S-A nrPDB Length = 195 Score = 191 bits (487), Expect = 1e-49, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 18/180 (10%) Query: 4 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAG 62 K++++G+ GK+ LL+ F+ D F T+ ++ V I VDG + +LA+WDTAG Sbjct: 14 TTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAG 73 Query: 63 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP--NVPIILVANKKD 120 QE + L P Y +++ + V D+ + + W+ E++ +C ++ +LV NK D Sbjct: 74 QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKID 132 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 + V ++G A + + ++E SAKT +GV+ FE +Q Sbjct: 133 KEN-------------REVDRNEGLKFARK-HSMLFIEASAKTCDGVQCAFEELVEKIIQ 178 >2O52-A nrPDB Length = 200 Score = 191 bits (487), Expect = 1e-49, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 16/182 (8%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDT 60 + K +V+G GK+CLL F +++F + T+ + + V GK V+L +WDT Sbjct: 22 SDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDT 81 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKH-FCPNVPIILVANKK 119 AGQE + + Y L+ + + S ++ ++ W+ + + PN+ +IL NKK Sbjct: 82 AGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLA-AWLTDARTLASPNIVVILCGNKK 140 Query: 120 DLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 DL + V A + +LE SA T E V E F R L Sbjct: 141 DLDPEREVTFLEASRFAQE-------------NELMFLETSALTGENVEEAFLKCARTIL 187 Query: 180 QK 181 K Sbjct: 188 NK 189 >1TU4-A nrPDB Length = 171 Score = 191 bits (486), Expect = 1e-49, Method: Composition-based stats. Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 16/175 (9%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQ 63 + KLV++G+ A GK+ L++ F K +F E T+ ++ + +D V+ +WDTAGQ Sbjct: 7 QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQ 66 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLR 122 E Y L P+ Y ++ + + + +S + WV E+ + PN+ I L NK DL Sbjct: 67 ERYHSLAPMYYRGAQAAIVVYDITNEESFARA-KNWVKELQRQASPNIVIALSGNKADLA 125 Query: 123 SDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRA 177 + V + A+ + + ++E SAKT V E+F + Sbjct: 126 NKRAVDFQEAQSYADD-------------NSLLFMETSAKTSMNVNEIFMAIAKK 167 >2EW1-A nrPDB Length = 201 Score = 191 bits (486), Expect = 2e-49, Method: Composition-based stats. Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 20/192 (10%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTA 61 K+V++G+ GKTCL+ F++ FP T+ ++ + +E++G++V+L +WDTA Sbjct: 24 DFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTA 83 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN-VPIILVANKKD 120 GQE + + Y + +++ + + +S +PE W+ E++ + N V +LV NK D Sbjct: 84 GQERFRSITQSYYRSANALILTYDITCEESFRCLPE-WLREIEQYASNKVITVLVGNKID 142 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF-ETATRAAL 179 L V + A E Q YLE SAK + V ++F + A R Sbjct: 143 LAERREVSQQRAEEFSEA-------------QDMYYLETSAKESDNVEKLFLDLACRLIS 189 Query: 180 QKRYGSQNGCIN 191 + R QN +N Sbjct: 190 EAR---QNTLVN 198 >4RKE-A nrPDB Length = 176 Score = 191 bits (486), Expect = 2e-49, Method: Composition-based stats. Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 16/178 (8%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K +++GD GK+CLL+ F+ F V+ T+ + I +DGKQ++L +WDTAG E Sbjct: 11 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGLE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRS 123 + + Y L+ + + ++ N W+ + + H N+ I+L+ NK DL S Sbjct: 71 AFRSITRSYYRGAAGALLVYDITRRETF-NHLTTWLEDARQHSNSNMVIMLIGNKSDLDS 129 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 V+ ++G A A ++E SA+T V E F + +K Sbjct: 130 RR------------EVKKEEGEAFARE-HGLVFMETSARTAANVEEAFINTAKEIYEK 174 >2HEI-A nrPDB Length = 179 Score = 190 bits (484), Expect = 2e-49, Method: Composition-based stats. Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 16/175 (9%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQ 63 + KLV++G+ A GK+ L++ F K +F E T+ ++ + +D V+ +WDTAGQ Sbjct: 8 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQ 67 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLR 122 E Y L P+ Y ++ + + + ++ + WV E+ + P++ I L NK DL Sbjct: 68 ERYHSLAPMYYRGAQAAIVVYDITNQETFARA-KTWVKELQRQASPSIVIALAGNKADLA 126 Query: 123 SDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRA 177 + V E A+ + + ++E SAKT V ++F + Sbjct: 127 NKRMVEYEEAQAYADD-------------NSLLFMETSAKTAMNVNDLFLAIAKK 168 >5XR6-A nrPDB Length = 194 Score = 190 bits (484), Expect = 2e-49, Method: Composition-based stats. Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 16/180 (8%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWD 59 M KLV++GD GK+ LL F+K+EF T+ + +V+GK V+ +WD Sbjct: 21 MYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWD 80 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANK 118 TAGQE Y + Y L+ + V + EN +W+ E++ H PN+ ++L+ NK Sbjct: 81 TAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHTDPNIVVMLIGNK 139 Query: 119 KDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAA 178 DLR V+T++ +A A R Y ++E SA V F Sbjct: 140 CDLRH------------LVAVKTEEAKAFAERESLY-FMETSALDATNVENAFTEVLTQI 186 >5CM8-B nrPDB Length = 203 Score = 190 bits (484), Expect = 2e-49, Method: Composition-based stats. Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 14/178 (7%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K+++VG G GK+ L + F DEF E Y PT ++Y + +DG++V++ + DTAGQED Sbjct: 14 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQED 73 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSD 124 Y +R + + L FS+ +S + E ++ ++P +LV NK DL Sbjct: 74 YAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDLNDK 133 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 182 V +++ + A Y+E SAKT+E V +VF R ++ Sbjct: 134 RKVPLSECQLRAQQ-------------WAVPYVETSAKTRENVDKVFFDLMREIRSRK 178 >4UJ4-A nrPDB Length = 185 Score = 190 bits (484), Expect = 2e-49, Method: Composition-based stats. Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 16/183 (8%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K+V++GD GK+ LL F+++EF T+ + I+VDGK ++ +WDTAG E Sbjct: 11 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRS 123 Y + Y L+ + + + EN+ E+W+ E++ H N+ I+LV NK DLR Sbjct: 71 RYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLRH 129 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRY 183 V TD+ RA A + ++E SA V F+T + Sbjct: 130 LR------------AVPTDEARAFAEK-NGLSFIETSALDSTNVEAAFQTILTEIYRIVS 176 Query: 184 GSQ 186 Q Sbjct: 177 QKQ 179 >5YOZ-A nrPDB Length = 177 Score = 190 bits (483), Expect = 3e-49, Method: Composition-based stats. Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 15/177 (8%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQVELALWD 59 M A K+V++G+ GK+ + + F+++EF T+ ++ + +DG+ ++ +WD Sbjct: 11 MEATSAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWD 70 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANK 118 TAG E + L P+ Y L+ + + + +SL+ + W+ E++ P++ I+LV NK Sbjct: 71 TAGLERFRSLAPIYYRGASGALVVYDITNSESLKKA-QTWIKELRANADPSLIIVLVGNK 129 Query: 119 KDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETAT 175 KDL S V +DG+ +A Q + E SAK V +VF Sbjct: 130 KDLGSLRQ------------VSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLA 174 >3RAB-A nrPDB Length = 169 Score = 190 bits (483), Expect = 3e-49, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 16/181 (8%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTA 61 K++++G+ + GKT L ++ D F +V TV ++ V I + K+++L +WDTA Sbjct: 3 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTA 62 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKD 120 GQE Y + Y ++ + + + +S N + W ++K + N ++LV NK D Sbjct: 63 GQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWSTQIKTYSWDNAQVLLVGNKCD 121 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 + + V ++ GR +A + +++ E SAK V++ FE + Sbjct: 122 MEDERV------------VSSERGRQLADHLG-FEFFEASAKDNINVKQTFERLVDVICE 168 Query: 181 K 181 K Sbjct: 169 K 169 >3DZ8-A nrPDB Length = 191 Score = 190 bits (483), Expect = 4e-49, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 16/178 (8%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTA 61 KL+++G+ + GKT L ++ D F +V TV ++ V + K+V+L +WDTA Sbjct: 21 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTA 80 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKD 120 GQE Y + Y ++ + + + +S N + W ++K + N +ILV NK D Sbjct: 81 GQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCD 139 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAA 178 + + V T+ G+ +A ++ +D+ E SAK VR+ FE A Sbjct: 140 MEEERV------------VPTEKGQLLAEQLG-FDFFEASAKENISVRQAFERLVDAI 184 >2BMD-A nrPDB Length = 186 Score = 189 bits (480), Expect = 7e-49, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 78/181 (43%), Gaps = 16/181 (8%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTA 61 K +V+G+ GK+CLL F + +F + T+ + I V GK V+L +WDTA Sbjct: 8 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 67 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP-NVPIILVANKKD 120 GQE + + Y L+ + + S ++ N W+ + + N+ IIL NKKD Sbjct: 68 GQERFRSVTRSYYRGAAGALLVYDITSRETY-NALTNWLTDARMLASQNIVIILCGNKKD 126 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 L +D V A + +LE SA T E V E F R L Sbjct: 127 LDADREVTFLEASRFAQE-------------NELMFLETSALTGENVEEAFVQCARKILN 173 Query: 181 K 181 K Sbjct: 174 K 174 >2IL1-A nrPDB Length = 192 Score = 188 bits (479), Expect = 9e-49, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 87/182 (47%), Gaps = 15/182 (8%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDT 60 A + +++++G GKT L+ F+ D F E TV ++ + +E+ GK++ L +WDT Sbjct: 23 ADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDT 82 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKK 119 AGQE ++ + Y I++ + + ++ +++P KW+ + K+ + ++LV NK Sbjct: 83 AGQERFNSITSAYYRSAKGIILVYDITKKETFDDLP-KWMKMIDKYASEDAELLLVGNKL 141 Query: 120 DLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 D +D + G A +I + E SAK V E+F L Sbjct: 142 DCETDR------------EITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDIL 189 Query: 180 QK 181 +K Sbjct: 190 KK 191 >4RKF-A nrPDB Length = 190 Score = 188 bits (479), Expect = 1e-48, Method: Composition-based stats. Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 16/178 (8%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTA 61 KL+++G+ + GKT L ++ D F +V TV ++ V + K+V+L +WDTA Sbjct: 21 DYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTA 80 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKD 120 G E Y + Y ++ + V + DS ++ + WV ++K + N +ILV NK D Sbjct: 81 GLERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQD-WVTQIKTYSWDNAQVILVGNKCD 139 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAA 178 + Q + + GR +A ++ ++ E SAK V+ VFE Sbjct: 140 MED------------QRVISFERGRQLADQLG-VEFFETSAKENVNVKAVFERLVDII 184 >2KE5-A nrPDB Length = 174 Score = 188 bits (477), Expect = 2e-48, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 15/182 (8%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K+++VG G GK+ L + F DEF E Y PT ++Y + +DG++V++ + DTAG ED Sbjct: 4 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLED 63 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWVPEVKHFCPNVPIILVANKKDLRS 123 Y +R + + L+ FS+ +S E + + VK +P+++V NK DL Sbjct: 64 YAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEE 123 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRY 183 V E AR K E Y+E SAKT+ V +VF R K+ Sbjct: 124 RRQVPVEEARSKAEE-------------WGVQYVETSAKTRANVDKVFFDLMREIRTKKM 170 Query: 184 GS 185 Sbjct: 171 SE 172 >2HUP-A nrPDB Length = 201 Score = 188 bits (477), Expect = 2e-48, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 15/184 (8%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTA 61 KLV+VGD + GKTC++ F F E T+ ++ + +E+ GK+V+L +WDTA Sbjct: 27 DFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTA 86 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKD 120 GQE + + Y + ++ + + S ++P W+ +V+ + N+ +L+ NK D Sbjct: 87 GQERFRTITQSYYRSANGAILAYDITKRSSFLSVPH-WIEDVRKYAGSNIVQLLIGNKSD 145 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 L V + +++A +E SAK V E F + Sbjct: 146 LSELR------------EVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIM 193 Query: 181 KRYG 184 + G Sbjct: 194 RHGG 197 >2REX-B nrPDB Length = 197 Score = 188 bits (477), Expect = 2e-48, Method: Composition-based stats. Identities = 80/178 (44%), Positives = 117/178 (65%), Gaps = 1/178 (0%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 R KLV+VGD CGKT +L V +KD +PE YVPTVFENY A +E + ++VEL+LWDT+G Sbjct: 10 RCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVELSLWDTSGSP 69 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSD 124 YD +RPL Y D+D +L+CF + P+++++ +KW E+ +CP+ ++L+ K DLR+D Sbjct: 70 YYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLIGCKTDLRTD 129 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKE-GVREVFETATRAALQK 181 EL+ KQ P+ + G A+A ++ A YLE SA T E + +F TA+ L K Sbjct: 130 LSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTASMLCLNK 187 >4DXA-A nrPDB Length = 169 Score = 188 bits (477), Expect = 2e-48, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 13/178 (7%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 + KLVV+G GK+ L + F + F E Y PT+ ++Y +EVD +Q L + DTA Sbjct: 2 SMREYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTA 61 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKD 120 G E + +R L + + +S+ + + ++ + ++ +VP+ILV NK D Sbjct: 62 GTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCD 121 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAA 178 L + V + G+ +A + +LE SAK+K V E+F R Sbjct: 122 LEDERV------------VGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 167 >4KYI-B nrPDB Length = 170 Score = 187 bits (476), Expect = 2e-48, Method: Composition-based stats. Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 16/175 (9%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQ 63 + KLV++G+ A GK+ L++ F K +F E T+ ++ + +D V+ +WDTAG Sbjct: 9 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGL 68 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLR 122 E Y L P+ Y ++ + + + D+ + WV E+ + PN+ I L NK DL Sbjct: 69 ERYHSLAPMYYRGAQAAIVVYDITNTDTFARA-KNWVKELQRQASPNIVIALAGNKADLA 127 Query: 123 SDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRA 177 S V + A+ + + ++E SAKT V E+F + Sbjct: 128 SKRAVEFQEAQAYADD-------------NSLLFMETSAKTAMNVNEIFMAIAKK 169 >2G6B-A nrPDB Length = 180 Score = 187 bits (476), Expect = 2e-48, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 17/185 (9%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEF-PEVYVPTVFENYV-ADIEVDGKQVELALWDT 60 + K+++VGD GKTCLL+ F F ++ TV ++ ++VDG +V+L +WDT Sbjct: 8 DVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDT 67 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP-NVPIILVANKK 119 AGQE + + Y D +L+ + V + S +NI + W+ E+ + +V ++L+ NK Sbjct: 68 AGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNI-QAWLTEIHEYAQHDVALMLLGNKV 126 Query: 120 DLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 D + V+ +DG +A ++E SAKT V F + Sbjct: 127 D------------SAHERVVKREDGEKLAKE-YGLPFMETSAKTGLNVDLAFTAIAKELK 173 Query: 180 QKRYG 184 ++ Sbjct: 174 RRSMK 178 >2FG5-A nrPDB Length = 192 Score = 187 bits (476), Expect = 2e-48, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 17/180 (9%) Query: 2 AAIR-KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQVELALWD 59 +AIR K+ ++GD GK+ ++ F +D F PT+ +++ + + + +WD Sbjct: 19 SAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWD 78 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANK 118 TAGQE + L P+ Y + ++ + + DS + +KWV E+K H N+ + + NK Sbjct: 79 TAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTL-KKWVKELKEHGPENIVMAIAGNK 137 Query: 119 KDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAA 178 DL V D + A I A +E SAK + E+F+ +R Sbjct: 138 CDLSDIR------------EVPLKDAKEYAESIGAIV-VETSAKNAINIEELFQGISRQI 184 >1EK0-A nrPDB Length = 170 Score = 187 bits (475), Expect = 3e-48, Method: Composition-based stats. Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 13/180 (7%) Query: 4 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAG 62 KLV++G+ A GK+ +++ F ++F E PT+ ++ + ++ V+ +WDTAG Sbjct: 2 TSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAG 61 Query: 63 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP-NVPIILVANKKDL 121 QE + L P+ Y + L+ + V P S WV E+ ++ I LV NK D+ Sbjct: 62 QERFASLAPMYYRNAQAALVVYDVTKPQSFIKA-RHWVKELHEQASKDIIIALVGNKIDM 120 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 L + V ++G +A + + E SAKT E V +VF K Sbjct: 121 ---------LQEGGERKVAREEGEKLAEE-KGLLFFETSAKTGENVNDVFLGIGEKIPLK 170 >5LDD-C nrPDB Length = 207 Score = 186 bits (473), Expect = 5e-48, Method: Composition-based stats. Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 18/190 (9%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQVELALWDTA 61 + K++++GD GKT L+ + +F Y T+ +++ ++ VD +QV + LWDTA Sbjct: 8 KVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTA 67 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-----PNVPIILVA 116 GQE + L Y D ++ F V++ S + + + W E N P +++ Sbjct: 68 GQERFQSLGVAFYRGADCCVLVFDVNNAKSFDAL-DSWRDEFLIQASPRDPENFPFVVLG 126 Query: 117 NKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 K D+ + V + T + Y E SAK V E F+ R Sbjct: 127 IKIDVEESKRV-----------ISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIAR 175 Query: 177 AALQKRYGSQ 186 AL + + Sbjct: 176 NALMQEESEE 185 >4KLZ-A nrPDB Length = 173 Score = 185 bits (471), Expect = 8e-48, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 14/181 (7%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 ++ KLV++G G GK+ + + F FPE + PT+ + Y I +D + L + DTA Sbjct: 2 SSREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTA 61 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPE-KWVPEVKHFCPNVPIILVANKKD 120 GQ ++ +R + ++C+S+ S + E K + + P++LV NK D Sbjct: 62 GQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSD 121 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 L+ V ++G A+A + + E SA + + +VF R + Sbjct: 122 LKQLRQ------------VTKEEGLALAREF-SCPFFETSAAYRYYIDDVFHALVREIRR 168 Query: 181 K 181 K Sbjct: 169 K 169 >1ZC4-A nrPDB Length = 175 Score = 185 bits (470), Expect = 1e-47, Method: Composition-based stats. Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 14/179 (7%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K+++VG G GK+ L + F DEF E Y PT ++Y + +DG++V++ + DTAG ED Sbjct: 7 HKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLED 66 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSD 124 Y +R + + L FS+ +S + ++ NVP +LV NK DL Sbjct: 67 YAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLEDK 126 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRY 183 V E A+ + E +Y+E SAKT+ V +VF R ++ Sbjct: 127 RQVSVEEAKNRAEQ-------------WNVNYVETSAKTRANVDKVFFDLMREIRARKM 172 >5UB8-A nrPDB Length = 222 Score = 185 bits (469), Expect = 1e-47, Method: Composition-based stats. Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 16/177 (9%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K+V++GD GK+ LL F++DEF T+ + +E+DGK+V+ +WDTAGQE Sbjct: 16 YKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQE 75 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP-NVPIILVANKKDLRS 123 Y + Y L+ + + +S E++ +W+ E+K N+ I LV NK DL Sbjct: 76 RYRAITSAYYRGAVGALIVYDIAKTESYESVS-RWLKELKEHADANIIIELVGNKSDLDH 134 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 V TE A+ + E SA + + V F + + Sbjct: 135 LRAVPTEEAKNFAME-------------NNLLFTEASALSSDNVDLSFHQLLKNIYE 178 >3BFK-A nrPDB Length = 181 Score = 184 bits (467), Expect = 2e-47, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 17/186 (9%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEV-DGKQVELALWDTAGQ 63 K+V++GD GK+ LL F++DEF T+ + I++ + K ++ +WDTAGQ Sbjct: 8 FKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQ 67 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP-NVPIILVANKKDLR 122 E Y + Y L+ + + +S ENI EKW+ E++ N+ I+LV NK DL+ Sbjct: 68 ERYRAITSAYYRGAVGALLVYDITKKNSFENI-EKWLKELRDNADSNIVILLVGNKSDLK 126 Query: 123 SDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 182 + A + +A ++E SA V F R Sbjct: 127 HLRVINDNDATQYAKK------EKLA-------FIETSALEATNVELAFHQLLNEIYNVR 173 Query: 183 YGSQNG 188 Q Sbjct: 174 QKKQAT 179 >4PHF-A nrPDB Length = 184 Score = 183 bits (466), Expect = 3e-47, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 19/183 (10%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQV-ELALWDTAGQE 64 K++++GD GKT L+ + D++ Y T+ +++ ++ VDG +V + +WDTAGQE Sbjct: 12 KVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQE 71 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-----PNVPIILVANKK 119 + L Y D ++ + V + S ENI + W E P +++ NK Sbjct: 72 RFQSLGVAFYRGADCCVLVYDVTNASSFENI-KSWRDEFLVHANVNSPETFPFVILGNKI 130 Query: 120 DLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 D + + V + +A + SAK V FE R+AL Sbjct: 131 DAEESKKI-----------VSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSAL 179 Query: 180 QKR 182 Q+ Sbjct: 180 QQN 182 >6IYB-A nrPDB Length = 199 Score = 183 bits (465), Expect = 4e-47, Method: Composition-based stats. Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 21/185 (11%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQVELALWDTA 61 + K++++GD GKT L+ + +F Y T+ +++ ++ VD + V + +WDTA Sbjct: 11 KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 70 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-----PNVPIILVA 116 G E + Y D ++ F V +P++ + + + W E N P +++ Sbjct: 71 GLERFQS-GVAFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLG 128 Query: 117 NKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 NK DL + V T +A Y E SAK V + F+T R Sbjct: 129 NKIDLEN-------------RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 175 Query: 177 AALQK 181 AL++ Sbjct: 176 NALKQ 180 >2F7S-A nrPDB Length = 217 Score = 183 bits (465), Expect = 4e-47, Method: Composition-based stats. Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 27/188 (14%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEV---------DGK--QVEL 55 KL+ +GD GKT L ++ ++F ++ TV ++ V GK +V L Sbjct: 27 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHL 86 Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK--HFCPNVPII 113 LWDTAGQE + L + D L+ F + S S N+ W+ +++ +C N I+ Sbjct: 87 QLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIV 145 Query: 114 LVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFET 173 L+ NK DL Q V R +A + Y E SA T + V + ET Sbjct: 146 LIGNKADLPD------------QREVNERQARELADK-YGIPYFETSAATGQNVEKAVET 192 Query: 174 ATRAALQK 181 +++ Sbjct: 193 LLDLIMKR 200 >3REG-A nrPDB Length = 194 Score = 183 bits (464), Expect = 5e-47, Method: Composition-based stats. Identities = 79/176 (44%), Positives = 107/176 (60%), Gaps = 10/176 (5%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K+VVVGDGA GKTCLL+ FSK E P YVPTVFEN+ ++ ++ L LWDTAGQE+Y Sbjct: 25 KIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILHLWDTAGQEEY 84 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126 DRLRPLSY D+DV+L+CF+V++ S +NI KW PE+KH+ +LV K DLR D Sbjct: 85 DRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYIDTAKTVLVGLKVDLRKD-- 142 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 182 + V +G + ++ Y+E S+ K G+ EVFE + + Sbjct: 143 --------GSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCIFSNK 190 >2FFQ-A nrPDB Length = 171 Score = 182 bits (462), Expect = 1e-46, Method: Composition-based stats. Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 16/178 (8%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQ 63 + KLV +G+ + GKT L+ F D F Y T+ +++ + ++ + V L LWDTAGQ Sbjct: 2 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 61 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLR 122 E + L P D+ V ++ + + + +S + KW+ +V+ +V I+LV NK DL Sbjct: 62 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTS-KWIDDVRTERGSDVIIMLVGNKTDLA 120 Query: 123 SDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 + E + + + ++E SAKT V+++F A L+ Sbjct: 121 DKRQITIEEGEQRAKELS-------------VMFIETSAKTGYNVKQLFRRVASALLE 165 >1YVD-A nrPDB Length = 169 Score = 181 bits (461), Expect = 1e-46, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 80/176 (45%), Gaps = 16/176 (9%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQ 63 K+ ++GD GK+ ++ F +D F PT+ +++ ++ + + +WDTAGQ Sbjct: 5 ELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQ 64 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLR 122 E + L P+ Y + ++ + + ++ + + WV E++ H P++ + + NK DL Sbjct: 65 ERFRALAPMYYRGSAAAIIVYDITKEETFSTL-KNWVRELRQHGPPSIVVAIAGNKCDLT 123 Query: 123 SDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAA 178 V D + A I A ++E SAK + E+F +R Sbjct: 124 DVREVMER------------DAKDYADSIHAI-FVETSAKNAININELFIEISRRI 166 >3RWM-B nrPDB Length = 185 Score = 181 bits (459), Expect = 2e-46, Method: Composition-based stats. Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 16/177 (9%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K+V++GD GK+ LL F+ DEF T+ + IEV+ K+++ +WDTAG E Sbjct: 11 FKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGLE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRS 123 Y + Y L+ + + S EN W+ E++ NV + L+ NK DL Sbjct: 71 RYRAITSAYYRGAVGALIVYDISKSSSYENC-NHWLTELRENADDNVAVGLIGNKSDLAH 129 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 V TD+ + A+ Q + E SA + V + F A Q Sbjct: 130 LR------------AVPTDEAKNFAMENQML-FTETSALNSDNVDKAFRELIVAIFQ 173 >3CON-A nrPDB Length = 190 Score = 181 bits (459), Expect = 2e-46, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 17/172 (9%) Query: 18 KTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I ++ F + Y PT+ ++Y + +DG+ L + DTAGQE+Y +R Sbjct: 34 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 93 Query: 78 DVILMCFSVDSPDSLE--NIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMK 135 + L F++++ S N+ + + VK +VP++LV NK DL + Sbjct: 94 EGFLCVFAINNSKSFADINLYREQIKRVKD-SDDVPMVLVGNKCDLPT------------ 140 Query: 136 QEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRYGSQN 187 V T +A ++E SAKT++GV + F T R Q R N Sbjct: 141 -RTVDTKQAHELAKS-YGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLN 190 >2G77-B nrPDB Length = 198 Score = 180 bits (458), Expect = 3e-46, Method: Composition-based stats. Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 21/177 (11%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQE 64 K++V+GD GKTCL F FP+ T+ ++ +++DG+++++ LWDTAGQE Sbjct: 30 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQE 89 Query: 65 DYD-RLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHF--CPNVPIILVANKKDL 121 + + Y + ++ + + + S ++P W+ E K ++P ILV NK DL Sbjct: 90 RFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLP-AWIEECKQHLLANDIPRILVGNKCDL 148 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAK---TKEGVREVFETAT 175 RS V T+LA+ + E SAK + V +F T Sbjct: 149 RSAIQVPTDLAQKFA-------------DTHSMPLFETSAKNPNDNDHVEAIFMTLA 192 >1YZU-A nrPDB Length = 170 Score = 180 bits (456), Expect = 5e-46, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 95/180 (52%), Gaps = 16/180 (8%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQVELALWDTA 61 A K+V++G+G GKT L++ + +++F + ++ T+ +++ + + GK+V LA+WDTA Sbjct: 4 AYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTA 63 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN-VPIILVANKKD 120 GQE + L P+ Y D++ ++ + + DS + + + WV E++ N + + +V NK D Sbjct: 64 GQERFHALGPIYYRDSNGAILVYDITDEDSFQKV-KNWVKELRKMLGNEICLCIVGNKID 122 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 L + HV + A E V + SAK +G+ E+F + ++ Sbjct: 123 LEKERHVSIQEAESYAESV-------------GAKHYHTSAKQNKGIEELFLDLCKRMIE 169 >1Z06-A nrPDB Length = 189 Score = 180 bits (456), Expect = 5e-46, Method: Composition-based stats. Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 21/177 (11%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQE 64 K++V+GD GKTCL F FP+ T+ ++ +++DG+++++ LWDTAGQE Sbjct: 21 FKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQE 80 Query: 65 DYD-RLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHF--CPNVPIILVANKKDL 121 + + Y + ++ + + + S ++P W+ E K ++P ILV NK DL Sbjct: 81 RFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLP-AWIEECKQHLLANDIPRILVGNKCDL 139 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAK---TKEGVREVFETAT 175 RS V T+LA+ + E SAK + V +F T Sbjct: 140 RSAIQVPTDLAQKFA-------------DTHSMPLFETSAKNPNDNDHVEAIFMTLA 183 >1D5C-A nrPDB Length = 162 Score = 179 bits (454), Expect = 9e-46, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 16/175 (9%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQ 63 + KLV +G+ A GKT ++ F D F Y T+ +++ + +D V L LWDTAGQ Sbjct: 1 KYKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQ 60 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLR 122 E + L P D+ ++ + + + S EN KW+ ++ +V I LV NK DL Sbjct: 61 ERFRSLIPSYIRDSAAAIVVYDITNRQSFENT-TKWIQDILNERGKDVIIALVGNKTDLG 119 Query: 123 SDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRA 177 V E K + T + E SAK ++ +F+ Sbjct: 120 DLRKVTYEEGMQKAQEYNT-------------MFHETSAKAGHNIKVLFKKTASK 161 >3TSO-A nrPDB Length = 178 Score = 178 bits (453), Expect = 1e-45, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 16/178 (8%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K+V++G+ GKT LL F+++EF T+ + + + V+ +WDTAG E Sbjct: 11 FKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLE 70 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP-NVPIILVANKKDLRS 123 Y + Y L+ F + + + E+W+ E+ + ++LV NK DL Sbjct: 71 RYRAITSAYYRGAVGALLVFDLTKHQTYAVV-ERWLKELYDHAEATIVVMLVGNKSDLSQ 129 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 V TE ARM E +LE SA V FET + K Sbjct: 130 AREVPTEEARMFAE-------------NNGLLFLETSALDSTNVELAFETVLKEIFAK 174 >6HUF-A nrPDB Length = 182 Score = 178 bits (452), Expect = 1e-45, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 17/178 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQED 65 K + +GD GKT +L ++ +F ++ TV ++ I + K+++L LWDTAG E Sbjct: 11 KFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQLWDTAGLER 70 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK--HFCPNVPIILVANKKDLRS 123 + L + D L+ F + + +S N+ W+ ++K + N I+L NK DL Sbjct: 71 FRSLTTAFFRDAMGFLLLFDLTNEESFLNV-RNWISQLKTHAYSENPDIVLCGNKSDLED 129 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 + V AR E Y E SA + + E +++ Sbjct: 130 ERVVAAAEARQLAEH-------------YGIPYFETSAANGTNISQAIEMLLDLIMKR 174 >2IEZ-A nrPDB Length = 220 Score = 178 bits (451), Expect = 2e-45, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 27/188 (14%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGK----------QVEL 55 KL+ +GD GKT L ++ ++F ++ TV ++ + D + +V L Sbjct: 13 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHL 72 Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK--HFCPNVPII 113 LWDTAG E + L + D L+ F + S S N+ W+ +++ +C N I+ Sbjct: 73 QLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIV 131 Query: 114 LVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFET 173 L+ NK DL Q V R +A + Y E SA T + V + ET Sbjct: 132 LIGNKADLPD------------QREVNERQARELAEK-YGIPYFETSAATGQNVEKSVET 178 Query: 174 ATRAALQK 181 +++ Sbjct: 179 LLDLIMKR 186 >2P5S-A nrPDB Length = 199 Score = 177 bits (450), Expect = 2e-45, Method: Composition-based stats. Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 10/178 (5%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQE 64 K+V+ GD A GK+ L+ K+EF E T+ ++ + + VDG++ L LWDTAGQE Sbjct: 29 YKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQE 88 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRS 123 + + + D +L+ + V S NI E WV ++ VPI+LV NK D+R Sbjct: 89 RFRSIAKSYFRKADGVLLLYDVTCEKSFLNIRE-WVDMIEDAAHETVPIMLVGNKADIRD 147 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 A Q+ V G +A+ A + E SAK + E R ++ Sbjct: 148 ------TAATEGQKCVPGHFGEKLAMTYGAL-FCETSAKDGSNIVEAVLHLAREVKKR 198 >2IEY-A nrPDB Length = 195 Score = 177 bits (449), Expect = 3e-45, Method: Composition-based stats. Identities = 49/188 (26%), Positives = 81/188 (43%), Gaps = 27/188 (14%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGK----------QVEL 55 KL+ +GD GKT L ++ ++F ++ TV ++ + D + +V L Sbjct: 13 KLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVHL 72 Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK--HFCPNVPII 113 LWDTAG E + L + D L+ F + S S N+ W+ +++ +C N I+ Sbjct: 73 QLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNV-RNWMSQLQANAYCENPDIV 131 Query: 114 LVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFET 173 L+ NK DL Q V R +A + Y E SA T + V + ET Sbjct: 132 LIGNKADLPD------------QREVNERQARELAEK-YGIPYFETSAATGQNVEKSVET 178 Query: 174 ATRAALQK 181 +++ Sbjct: 179 LLDLIMKR 186 >2GIL-A nrPDB Length = 162 Score = 176 bits (447), Expect = 4e-45, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 16/175 (9%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQ 63 + KLV +G+ + GKT L+ F D F Y T+ +++ + ++ + V L LWDTAGQ Sbjct: 1 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 60 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLR 122 E + L P D+ V ++ + + + +S + KW+ +V+ +V I+LV NK DL Sbjct: 61 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQT-TKWIDDVRTERGSDVIIMLVGNKTDLA 119 Query: 123 SDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRA 177 V ++G A + ++E SAK V+++F A Sbjct: 120 DKRQ------------VSIEEGERKAKELNVM-FIETSAKAGYNVKQLFRRVAAA 161 >5LEF-A nrPDB Length = 191 Score = 176 bits (447), Expect = 5e-45, Method: Composition-based stats. Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 16/175 (9%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQ 63 + KLV +G+ + GKT L+ F D F Y T+ +++ + ++ + V L LWDTAG Sbjct: 9 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGL 68 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLR 122 E + L P D+ V ++ + + + +S + KW+ +V+ +V I+LV NK DL Sbjct: 69 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQT-TKWIDDVRTERGSDVIIMLVGNKTDLA 127 Query: 123 SDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRA 177 V ++G A + ++E SAK V+++F A Sbjct: 128 DKRQ------------VSIEEGERKAKELNVM-FIETSAKAGYNVKQLFRRVAAA 169 >4KU4-A nrPDB Length = 206 Score = 175 bits (445), Expect = 8e-45, Method: Composition-based stats. Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 34/202 (16%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 I K+ ++G+G GKT L + +K F E Y PT+ ++Y +DG L + DTA Sbjct: 11 GKITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCVIDGIPSHLEILDTA 70 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK---------------HF 106 GQE+Y LR ++ ++ F V S E E+ EV Sbjct: 71 GQEEYGALREQWIRQNELFVIVFDVTRRSSFE-AAERLFEEVIQTKRKLDETRRHPGDRH 129 Query: 107 CPNVP-----IILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSA 161 ++P ++LV NK DL + V T +G ++A ++ ++E SA Sbjct: 130 PDDLPFAPSLVVLVGNKCDLDTRR------------EVGTLEGSSLAKKLG-CGFVETSA 176 Query: 162 KTKEGVREVFETATRAALQKRY 183 K V E F + RA +++ Sbjct: 177 KLGTNVEEAFFSVVRADRRRKR 198 >3BC1-A nrPDB Length = 195 Score = 174 bits (442), Expect = 2e-44, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 27/188 (14%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEV-----------DGKQVEL 55 K + +GD GKT +L ++ +F ++ TV ++ V G+++ L Sbjct: 13 KFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIHL 72 Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK--HFCPNVPII 113 LWDTAG E + L + D L+ F + + S N+ W+ +++ + N I+ Sbjct: 73 QLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNV-RNWISQLQMHAYSENPDIV 131 Query: 114 LVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFET 173 L NK DL Q V+ ++ R +A + Y E SA + E Sbjct: 132 LCGNKSDLED------------QRAVKEEEARELAEK-YGIPYFETSAANGTNISHAIEM 178 Query: 174 ATRAALQK 181 +++ Sbjct: 179 LLDLIMKR 186 >2ERX-A nrPDB Length = 172 Score = 173 bits (439), Expect = 4e-44, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 15/178 (8%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 ++ V G G GK+ L++ F K F E Y+PTV + Y I D L + DT G Sbjct: 4 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQ 63 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWVPEVKHFCPNVPIILVANKKDLRS 123 + ++ LS ++ +S+ S SLE + + + E+K ++PI+LV NK D Sbjct: 64 FPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCD--- 120 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 V++ + A+A + ++E SAK V+E+F+ ++ Sbjct: 121 ---------ESPSREVQSSEAEALARTWK-CAFMETSAKLNHNVKELFQELLNLEKRR 168 >5UHV-A nrPDB Length = 166 Score = 173 bits (439), Expect = 5e-44, Method: Composition-based stats. Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 17/165 (10%) Query: 18 KTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I ++ F + Y PT+ ++Y + +DG+ L + DTAGQE+Y +R Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 75 Query: 78 DVILMCFSVDSPDSLE--NIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMK 135 + L F++++ S N+ + + VK +VP++LV NK DL + Sbjct: 76 EGFLCVFAINNSKSFADINLYREQIKRVKD-SDDVPMVLVGNKCDLPT------------ 122 Query: 136 QEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 V T +A ++E SAKT++GV + F T R Q Sbjct: 123 -RTVDTKQAHELAKS-YGIPFIETSAKTRQGVEDAFYTLVREIRQ 165 >5WDQ-A nrPDB Length = 170 Score = 172 bits (437), Expect = 8e-44, Method: Composition-based stats. Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 17/165 (10%) Query: 18 KTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I ++ F + Y PT+ ++Y + +DG+ L + DTAGQE+Y +R Sbjct: 20 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 79 Query: 78 DVILMCFSVDSPDSLENIPE--KWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMK 135 + L F++++ S E+I + + + VK +VP++LV NK D Sbjct: 80 EGFLCVFAINNTKSFEDIHQYREQIKRVKD-SDDVPMVLVGNKCD-------------AA 125 Query: 136 QEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 V + + +A Y+E SAKT++GV + F T R Q Sbjct: 126 ARTVESRQAQDLARS-YGIPYIETSAKTRQGVEDAFYTLVREIRQ 169 >5WDR-A nrPDB Length = 171 Score = 172 bits (436), Expect = 1e-43, Method: Composition-based stats. Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 16/165 (9%) Query: 18 KTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I + F Y PT+ ++Y + +D + L + DTAGQEDY +R Sbjct: 20 KSALTIQLIQQHFVTEYDPTIEDSYRKHVSIDDEACLLDILDTAGQEDYSAMRDQYMRTG 79 Query: 78 DVILMCFSVDSPDSLENIP--EKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMK 135 + L +S+DS SL+ I + + VK VP+ILV NK DL Sbjct: 80 EGFLCVYSIDSQQSLDEIHSFREQILRVKDQDE-VPMILVGNKCDLEEHR---------- 128 Query: 136 QEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 V T+ G+A+A + ++E SAK + V E F R + Sbjct: 129 --EVSTEAGQAVAKS-YSIPFMETSAKKRINVEEAFYQLVREIRK 170 >2ATV-A nrPDB Length = 196 Score = 172 bits (436), Expect = 1e-43, Method: Composition-based stats. Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 16/185 (8%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 62 + KL + G GK+ L++ F F Y PT+ Y +D + V + + DTAG Sbjct: 26 SAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAG 85 Query: 63 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENI-PEKWVPEVKHFCPNVPIILVANKKDL 121 QED + R + ++ + + S E + P K + + NV +ILV NK DL Sbjct: 86 QEDTIQ-REGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADL 144 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKE-GVREVFETATRAALQ 180 V T++G +A + A + ECSA T E + E+F R + Sbjct: 145 DHSRQ------------VSTEEGEKLATEL-ACAFYECSACTGEGNITEIFYELCREVRR 191 Query: 181 KRYGS 185 +R Sbjct: 192 RRMVQ 196 >4WA7-A nrPDB Length = 170 Score = 171 bits (434), Expect = 1e-43, Method: Composition-based stats. Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 17/167 (10%) Query: 18 KTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I ++ F + Y PT+ ++Y + +DG+ L + DTAG E+Y +R Sbjct: 17 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGLEEYSAMRDQYMRTG 76 Query: 78 DVILMCFSVDSPDSLENIP--EKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMK 135 + L F++++ S E+I + + VK +VP++LV NK DL S Sbjct: 77 EGFLCVFAINNTKSFEDIHHYREQIKRVKD-SEDVPMVLVGNKCDLPS------------ 123 Query: 136 QEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 182 V T + +A ++E SAKT++GV + F T R + + Sbjct: 124 -RTVDTKQAQDLARS-YGIPFIETSAKTRQGVDDAFYTLVREIRKHK 168 >1Z22-A nrPDB Length = 168 Score = 171 bits (433), Expect = 2e-43, Method: Composition-based stats. Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 15/181 (8%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYV-ADIEVDGKQVELALWDT 60 + + K+VVVG+GA GK+ ++ + K F + Y T+ +++ I+V+ + V L LWDT Sbjct: 2 SEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDT 61 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKD 120 AGQE++D + Y ++ FS +S E I W +V ++P LV NK D Sbjct: 62 AGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISS-WREKVVAEVGDIPTALVQNKID 120 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 L D ++ ++ +A R++ + S K V EVF+ LQ Sbjct: 121 LLDD------------SCIKNEEAEGLAKRLK-LRFYRTSVKEDLNVSEVFKYLAEKHLQ 167 Query: 181 K 181 K Sbjct: 168 K 168 >2FN4-A nrPDB Length = 181 Score = 171 bits (433), Expect = 2e-43, Method: Composition-based stats. Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 16/170 (9%) Query: 18 KTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I F + F Y PT+ ++Y VDG L + DTAGQE++ +R Sbjct: 22 KSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAG 81 Query: 78 DVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSDEHVRTELARMKQ 136 L+ F+++ S + + + ++ + P++LV NK DL S V A Sbjct: 82 HGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAFG 141 Query: 137 EPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRYGSQ 186 Y E SAK + V E FE RA ++Y Q Sbjct: 142 AS-------------HHVAYFEASAKLRLNVDEAFEQLVRAV--RKYQEQ 176 >5HZH-A nrPDB Length = 332 Score = 170 bits (432), Expect = 2e-43, Method: Composition-based stats. Identities = 76/140 (54%), Positives = 90/140 (64%) Query: 40 ENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKW 99 + ++ GK V L LWDTAG EDYDRLRPLSYP TDV L+CFS+ SP S EN+ KW Sbjct: 190 DEAAKELGSGGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKW 249 Query: 100 VPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLEC 159 PEV+H CPN PIILV K DLR D+ +L K P+ G AMA I A YLEC Sbjct: 250 YPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLEC 309 Query: 160 SAKTKEGVREVFETATRAAL 179 SA T+ G++ VF+ A RA L Sbjct: 310 SALTQRGLKTVFDEAIRAVL 329 Score = 72.2 bits (176), Expect = 1e-13, Method: Composition-based stats. Identities = 28/44 (63%), Positives = 35/44 (79%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDG 50 K VVVGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDG Sbjct: 8 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG 51 >4FMC-F nrPDB Length = 117 Score = 168 bits (425), Expect = 2e-42, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 70/116 (60%), Gaps = 3/116 (2%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDY 66 L+++GD GK+CLL+ F+ D + E Y+ T+ ++ + IE+DGK ++L +WDTAGQE + Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDL 121 + Y I++ + V +S N+ ++W+ E+ + NV +LV NK DL Sbjct: 61 RTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKLLVGNKCDL 115 >2ERY-A nrPDB Length = 172 Score = 167 bits (423), Expect = 3e-42, Method: Composition-based stats. Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 16/165 (9%) Query: 18 KTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I F + F Y PT+ ++Y +D + L + DTAGQE++ +R Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTG 77 Query: 78 DVILMCFSVDSPDSLENIPE--KWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMK 135 + L+ FSV S E I + + + VK P+IL+ NK DL Sbjct: 78 EGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDE-FPMILIGNKADLDH------------ 124 Query: 136 QEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 Q V ++G+ +A +++ Y+E SAK + V + F R + Sbjct: 125 QRQVTQEEGQQLARQLK-VTYMEASAKIRMNVDQAFHELVRVIRK 168 >3OES-A nrPDB Length = 201 Score = 162 bits (411), Expect = 7e-41, Method: Composition-based stats. Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 16/187 (8%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 +K+V++G GKT L F + EF E Y PTV Y + + + L L DTAGQ++ Sbjct: 25 RKVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYSKIVTLGKDEFHLHLVDTAGQDE 84 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPE-VKHFCPNVPIILVANKKDLRSD 124 Y L ++ +SV S S + I + H VP++LV NK DL + Sbjct: 85 YSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVLVGNKADLSPE 144 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAA--LQKR 182 V+ +G+ +A A ++E SA+ + + +F + ++ Sbjct: 145 R------------EVQAVEGKKLAESWGA-TFMESSARENQLTQGIFTKVIQEIARVENS 191 Query: 183 YGSQNGC 189 YG + C Sbjct: 192 YGQERRC 198 >3PIR-A nrPDB Length = 183 Score = 162 bits (410), Expect = 9e-41, Method: Composition-based stats. Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 17/167 (10%) Query: 18 KTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L I F + F Y PT+ ++Y+ E+D + L + DTAGQE++ +R Sbjct: 31 KSALTIQFFQKIFVPEYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTG 90 Query: 78 DVILMCFSVDSPDSLENIPE--KWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMK 135 D L+ +SV S E++ + + VK + P+ILVANK DL Sbjct: 91 DGFLIVYSVTDKASFEHVDRFHQLILRVKDR-ESFPMILVANKVDLMHLRK--------- 140 Query: 136 QEPVRTDDGRAMAVRIQAYDYLECSAKT-KEGVREVFETATRAALQK 181 V D G+ MA + Y+E SAK V + F R Q+ Sbjct: 141 ---VTRDQGKEMATKYN-IPYIETSAKDPPLNVDKTFHDLVRVIRQQ 183 >3CBQ-A nrPDB Length = 195 Score = 159 bits (402), Expect = 9e-40, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 18/181 (9%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQE 64 K+++VG+ GK+ L F + + P + Y I VD ++V L ++D Q Sbjct: 24 FKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVVYDIWEQG 83 Query: 65 D-YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP--NVPIILVANKKDL 121 D LR D L+ FSV S +PE + ++ P ++P+ILV NK DL Sbjct: 84 DAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVPETLL-RLRAGRPHHDLPVILVGNKSDL 142 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 + V ++GR +A + + ++E SA RE+FE A R + Sbjct: 143 A------------RSREVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVRQIRLR 189 Query: 182 R 182 R Sbjct: 190 R 190 >5UWI-A nrPDB Length = 237 Score = 158 bits (401), Expect = 1e-39, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 17/177 (9%) Query: 4 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVF-ENYVADIEVDGKQVELALWDTAG 62 ++ KLV+VGDG GKT + EF + YV T+ E + + ++ +WDTAG Sbjct: 30 VQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAG 89 Query: 63 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLR 122 QE + LR Y ++ F V S + +N+P W ++ C N+PI+L NK D++ Sbjct: 90 QEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVLCGNKVDIK 148 Query: 123 SDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 + + +++ Y + SAK+ + F R + Sbjct: 149 DRKVKAKSIVFHRKK---------------NLQYYDISAKSNYNFEKPFLWLARKLI 190 >2N1B-A nrPDB Length = 261 Score = 158 bits (401), Expect = 1e-39, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 17/177 (9%) Query: 4 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVF-ENYVADIEVDGKQVELALWDTAG 62 ++ KLV+VGDG GKT + EF + YV T+ E + + ++ +WDTAG Sbjct: 50 VQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAG 109 Query: 63 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLR 122 QE + LR Y ++ F V S + +N+P W ++ C N+PI+L NK D++ Sbjct: 110 QEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVLCGNKVDIK 168 Query: 123 SDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 + + +++ Y + SAK+ + F R + Sbjct: 169 DRKVKAKSIVFHRKK---------------NLQYYDISAKSNYNFEKPFLWLARKLI 210 >3Q72-A nrPDB Length = 166 Score = 158 bits (400), Expect = 2e-39, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 15/178 (8%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 K++++G GK+ L +F E Y I VDG++ L ++D Q+ Sbjct: 3 YKVLLLGAPGVGKSALARIFGGVEDGPEAEA-AGHTYDRSIVVDGEEASLMVYDIWEQDG 61 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSD 124 L D ++ +SV S E E V + +VPIILV NK DL Sbjct: 62 GRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDL--- 118 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 182 ++ V D+GRA AV + ++E SA V+ +FE R +R Sbjct: 119 ---------VRSREVSVDEGRACAV-VFDCKFIETSAALHHNVQALFEGVVRQIRLRR 166 >5CLL-A nrPDB Length = 191 Score = 157 bits (398), Expect = 3e-39, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 17/177 (9%) Query: 4 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVF-ENYVADIEVDGKQVELALWDTAG 62 ++ KLV+VGDG GKT + EF + YV T+ E + + ++ +WDTAG Sbjct: 9 VQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAG 68 Query: 63 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLR 122 QE + LR Y ++ F V S + +N+P W ++ C N+PI+L NK D++ Sbjct: 69 QEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVLCGNKVDIK 127 Query: 123 SDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179 + + +++ Y + SAK+ + F R + Sbjct: 128 DRKVKAKSIVFHRKK---------------NLQYYDISAKSNYNFEKPFLWLARKLI 169 >3WYF-A nrPDB Length = 219 Score = 157 bits (397), Expect = 3e-39, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 17/174 (9%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVF-ENYVADIEVDGKQVELALWDTAGQ 63 KLV+VGDG GKT + EF + Y+ T+ E + + +++ +WDTAG Sbjct: 12 TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGL 71 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRS 123 E + LR Y + ++ F V S + +N+P W ++ C N+PI+L NK D++ Sbjct: 72 EKFGGLRDGYYINAQCAIIMFDVTSRITYKNVP-NWHRDLVRVCENIPIVLCGNKVDVKE 130 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRA 177 ++K + + + + Y + SAK+ + F R Sbjct: 131 R--------KVKAKTITFHRKKNL-------QYYDISAKSNYNFEKPFLWLARK 169 >2G3Y-A nrPDB Length = 211 Score = 156 bits (394), Expect = 7e-39, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 21/192 (10%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVF--SKDEFPEVYVPTVFENYVADIEVDGKQ---VELA 56 ++V++G+ GK+ L +F D + Y + VDG+ + L Sbjct: 34 GNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLD 93 Query: 57 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILV 115 +W+ G+ ++ L D L+ +S+ S E E + + ++PIILV Sbjct: 94 MWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILV 151 Query: 116 ANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETAT 175 NK DL ++ V +GRA AV + ++E SA + V+E+FE Sbjct: 152 GNKSDL------------VRCREVSVSEGRACAV-VFDCKFIETSAAVQHNVKELFEGIV 198 Query: 176 RAALQKRYGSQN 187 R +R + Sbjct: 199 RQVRLRRDSKEK 210 >2CJW-A nrPDB Length = 192 Score = 155 bits (393), Expect = 9e-39, Method: Composition-based stats. Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 21/192 (10%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVF--SKDEFPEVYVPTVFENYVADIEVDGKQ---VELA 56 ++V++G+ GK+ L +F D + Y + VDG+ + L Sbjct: 3 GMTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLD 62 Query: 57 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILV 115 +W+ G+ ++ L D L+ +S+ S E E + + ++PIILV Sbjct: 63 MWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILV 120 Query: 116 ANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETAT 175 NK DL ++ V +GRA AV + ++E SA + V+E+FE Sbjct: 121 GNKSDL------------VRCREVSVSEGRACAV-VFDCKFIETSAAVQHNVKELFEGIV 167 Query: 176 RAALQKRYGSQN 187 R +R + Sbjct: 168 RQVRLRRDSKEK 179 >5XOJ-A nrPDB Length = 182 Score = 155 bits (393), Expect = 1e-38, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 17/174 (9%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVF-ENYVADIEVDGKQVELALWDTAGQ 63 KLV+VGDG GKT + EF + Y+ T+ E + + +++ +WDTAG Sbjct: 12 TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGL 71 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRS 123 E + LR Y + ++ F V S + +N+P W ++ C N+PI+L NK D++ Sbjct: 72 EKFGGLRDGYYINAQCAIIMFDVTSRITYKNVP-NWHRDLVRVCENIPIVLCGNKVDVKE 130 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRA 177 ++K + + + + Y + SAK+ + F R Sbjct: 131 R--------KVKAKTITFHRKKNL-------QYYDISAKSNYNFEKPFLWLARK 169 >3RAP-R nrPDB Length = 167 Score = 155 bits (391), Expect = 2e-38, Method: Composition-based stats. Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 16/162 (9%) Query: 18 KTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L + F F E Y PT+ + Y +IEVD L + DTAG E + +R L + Sbjct: 16 KSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNG 75 Query: 78 DVILMCFSVDSPDSLENIP--EKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMK 135 ++ +S+ + S ++I + VK + VP+ILV NK DL S+ V + Sbjct: 76 QGFILVYSLVNQQSFQDIKPMRDQIIRVKRY-EKVPVILVGNKVDLESEREVSSSE---- 130 Query: 136 QEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRA 177 GRA+A ++E SAK+K V E+F R Sbjct: 131 --------GRALAEEWG-CPFMETSAKSKTMVDELFAEIVRQ 163 >2GF0-A nrPDB Length = 199 Score = 153 bits (388), Expect = 3e-38, Method: Composition-based stats. Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 16/168 (9%) Query: 18 KTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDT 77 K+ L++ F K F + Y+PT+ + Y I D L + DT G + ++ LS Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKG 80 Query: 78 DVILMCFSVDSPDSLENIPE--KWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMK 135 ++ FSV S SLE + K + ++K ++P++LV NK D Sbjct: 81 HAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCD-------------ET 127 Query: 136 QEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRY 183 Q V T + +A+A + ++E SAK V+E+F+ ++ Sbjct: 128 QREVDTREAQAVAQEWK-CAFMETSAKMNYNVKELFQELLTLETRRNM 174 >3Q85-A nrPDB Length = 169 Score = 153 bits (387), Expect = 5e-38, Method: Composition-based stats. Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 18/181 (9%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPT-VFENYVADIEVDGKQVELALWDTAGQE 64 K+++VG+ GK+ L F + + + Y I VD ++V L ++D Q Sbjct: 3 FKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQG 62 Query: 65 D-YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP--NVPIILVANKKDL 121 D L+ D L+ FSV S +PE + ++ P ++P+ILV NK DL Sbjct: 63 DAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVPETLL-RLRAGRPHHDLPVILVGNKSDL 121 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 + V ++GR +A + + ++E SA RE+FE A R + Sbjct: 122 A------------RSREVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVRQIRLR 168 Query: 182 R 182 R Sbjct: 169 R 169 >3T5G-A nrPDB Length = 181 Score = 153 bits (386), Expect = 6e-38, Method: Composition-based stats. Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 18/177 (10%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 +K+ ++G + GK+ L I F + +F + Y PT+ + I V+G++ L L DTAGQ+ Sbjct: 6 SRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQD 65 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIP---EKWVPEVKHFCPNVPIILVANKKDL 121 +Y D + ++ +SV S S E I K + V +PI+LV NKKDL Sbjct: 66 EYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKV--QIPIMLVGNKKDL 123 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAA 178 + + ++G+A+A A +LE SAK + +VF A Sbjct: 124 HMERV------------ISYEEGKALAESWNA-AFLESSAKENQTAVDVFRRIILEA 167 >2NZJ-A nrPDB Length = 175 Score = 148 bits (374), Expect = 2e-36, Method: Composition-based stats. Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 16/175 (9%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 + ++V++GD GKT L +F+ + +++ + Y + VDG+ L + DT Sbjct: 1 SMALYRVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERTLTVDGEDTTLVVVDTW 60 Query: 62 GQEDYDRLRPL--SYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANK 118 E D+ ++ +S+ S E+ E + + H +VPIILV NK Sbjct: 61 EAEKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNK 120 Query: 119 KDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFET 173 DL + V ++GRA AV + ++E SA + V E+FE Sbjct: 121 ADLA------------RCREVSVEEGRACAV-VFDCKFIETSATLQHNVAELFEG 162 >4CZ2-A nrPDB Length = 230 Score = 147 bits (371), Expect = 3e-36, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 20/181 (11%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQ-VELALWDTAGQ 63 K++V+G+ GKT ++ + F + Y T+ ++ + + D + V L LWD AG Sbjct: 31 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGL 90 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV--KHFCPN---VPIILVANK 118 E + + + Y + + F + + E + KW ++ K PN +P +L+ANK Sbjct: 91 ERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 149 Query: 119 KDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAA 178 D D + + E SAK + E Sbjct: 150 CDQNKDSSM------------SPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKM 197 Query: 179 L 179 L Sbjct: 198 L 198 >6FF8-A nrPDB Length = 181 Score = 146 bits (370), Expect = 5e-36, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 68/181 (37%), Gaps = 20/181 (11%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQ-VELALWDTAGQ 63 K++V+G+ GKT ++ + F + Y T+ ++ + + D + V L LWD AG Sbjct: 9 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGL 68 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV--KHFCPN---VPIILVANK 118 E + + + Y + + F + + E + KW ++ K PN +P +L+ANK Sbjct: 69 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 127 Query: 119 KDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAA 178 D D + E SAK + E Sbjct: 128 CDQNKDSSQ------------SPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 175 Query: 179 L 179 L Sbjct: 176 L 176 >4DJT-A nrPDB Length = 218 Score = 144 bits (365), Expect = 2e-35, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 17/177 (9%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFE--NYVADIEVDGKQVELALWDT 60 + K+ ++GDG GKT + F + Y TV + V ++ G ++ +WDT Sbjct: 9 ELTYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDT 68 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN-VPIILVANKK 119 AGQE L+ + Y ++ F V S + +N+ +WV E + N PI++ ANK Sbjct: 69 AGQEKKAVLKDVYYIGASGAILFFDVTSRITCQNLA-RWVKEFQAVVGNEAPIVVCANKI 127 Query: 120 DLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 D+++ + + +L ++ + Y+Y E SAKT F R Sbjct: 128 DIKNRQKISKKLVME-------------VLKGKNYEYFEISAKTAHNFGLPFLHLAR 171 >5XC3-A nrPDB Length = 176 Score = 143 bits (361), Expect = 5e-35, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 77/178 (43%), Gaps = 16/178 (8%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEV--DGKQVELALW 58 M K++++G GK+ ++ F + PT+ + + + +GK ++L +W Sbjct: 1 MENNGYKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIW 60 Query: 59 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIIL-VAN 117 DTAGQE + + + Y ++ L+ F V +S +++ W+ +++ C IL VAN Sbjct: 61 DTAGQERFRSITKMYYTNSLGCLVVFDVTDRESFDDVYY-WINDLRINCHTTYYILVVAN 119 Query: 118 KKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETAT 175 K D+ + V ++ + DY+ S+ + V +F Sbjct: 120 KIDIDKN-----------NWRVSENEIKKFCRD-NDCDYVFASSFESDTVNNLFGKMI 165 >3CLV-A nrPDB Length = 208 Score = 143 bits (361), Expect = 5e-35, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 82/217 (37%), Gaps = 54/217 (24%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIE--------------- 47 K V++G+ + GK+ +++ +KD F E T+ ++ + Sbjct: 5 KSSYKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNEK 64 Query: 48 --------------VDGK---------QVELALWDTAGQEDYDRLRPLSYPDTDVILMCF 84 + + ++ +WDTAGQE Y + PL Y ++ F Sbjct: 65 NNNINSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIVVF 124 Query: 85 SVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDG 144 + + ++L+ + WV ++K N IILVANK D + E+ + Q+ Sbjct: 125 DISNSNTLDRA-KTWVNQLK-ISSNYIIILVANKIDKNKFQVDILEVQKYAQD------- 175 Query: 145 RAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 +++ SAKT ++ +F + Sbjct: 176 -------NNLLFIQTSAKTGTNIKNIFYMLAEEIYKN 205 >3E5H-A nrPDB Length = 178 Score = 136 bits (343), Expect = 7e-33, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 20/181 (11%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVF-ENYVADIEVDGK-QVELALWDTAG 62 + K+VV+GDGA GKT L F+++ F + Y T+ + ++ I + G V L +WD G Sbjct: 6 QLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGG 65 Query: 63 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKW---VPEVKHFCPNVPII-LVANK 118 Q ++ +L+ + + + S EN+ E W V +V P++ LV NK Sbjct: 66 QTIGGKMLDKYIYGAQGVLLVYDITNYQSFENL-EDWYTVVKKVSEESETQPLVALVGNK 124 Query: 119 KDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAA 178 DL ++ + + SAKT + V F+ Sbjct: 125 IDLEH------------MRTIKPEKHLRFCQENGFSSHF-VSAKTGDSVFLCFQKVAAEI 171 Query: 179 L 179 L Sbjct: 172 L 172 >5C1S-A nrPDB Length = 391 Score = 127 bits (319), Expect = 4e-30, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 15/174 (8%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 + +L+VVG GKT L D F E + E +++D + +++ D Sbjct: 58 IGKKEIRLLVVGSSGVGKTTLC-----DCFFESHQSQGEETREKHVQIDNDFIRISISDI 112 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP-NVPIILVANKK 119 AGQ+ + Y D IL+ + + S ++ W+P++ +C + II++ NKK Sbjct: 113 AGQQSFYAC-DNPYDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIGNKK 171 Query: 120 DLRSDEHVRTELARMKQ--------EPVRTDDGRAMAVRIQAYDYLECSAKTKE 165 D D + + A E DD + + D+L+C K + Sbjct: 172 DQEIDRIITRKEAEQFAQDRLCQFYEISTKDDSCQLLFDCISRDFLQCDIKIRM 225 Score = 80.7 bits (198), Expect = 4e-16, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 76/195 (38%), Gaps = 34/195 (17%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGK--QVELAL--- 57 I+ ++++VGD GKT + F+ + PT +++ I + +++ + Sbjct: 220 DIKIRMLMVGDQNVGKTTFIRKFA------LQDPT-GHDFMNAITTRFEMEKIKYEIIMI 272 Query: 58 -WDTAGQEDYDRL---RPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPII 113 W Y++L P + IL+ + + + +S +NI K+ P + + +V + Sbjct: 273 DWGF-----YNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAGV 327 Query: 114 LVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFET 173 +V K DL Q + D +A Y Y+E S+K E + + Sbjct: 328 IVGYKTDLE------------AQRKITMGDALTLA-DWLGYKYVEMSSKDTEDHSSIIKA 374 Query: 174 ATRAALQKRYGSQNG 188 + R + Sbjct: 375 LAHSIRINRLKIEQS 389 >2YC4-C nrPDB Length = 208 Score = 110 bits (276), Expect = 3e-25, Method: Composition-based stats. Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 22/169 (13%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKD--EFPEVYVPTVF-ENYVADIEVDGKQVE--LA 56 A +R K+ VVG+ GK+ L+ +F+ +F + Y T E VA + + V L Sbjct: 17 ATLRCKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELF 76 Query: 57 LWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN----VPI 112 L DTAG + Y + ++ F V S +S E+ + W +K P+ + Sbjct: 77 LLDTAGSDLYKEQISQYWNGVYYAILVFDVSSMESFESC-KAWFELLKSARPDRERPLRA 135 Query: 113 ILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSA 161 +LVANK DL H VR D + A D+ + SA Sbjct: 136 VLVANKTDLPPQRH-----------QVRLDMAQDWATT-NTLDFFDVSA 172 >3D6T-B nrPDB Length = 171 Score = 105 bits (263), Expect = 1e-23, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 64/137 (46%), Gaps = 6/137 (4%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEV--YVPTVFENYVA-DIEVDGKQ---VELALWDT 60 KL++VG+ GKT LL K + ++ TV + I++ K+ + L +WD Sbjct: 2 KLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWDF 61 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKD 120 AG+E++ P + L + + + + + W+ +K + P+ILV D Sbjct: 62 AGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSSPVILVGTHLD 121 Query: 121 LRSDEHVRTELARMKQE 137 + ++ + ++++ +E Sbjct: 122 VSDEKQRKACMSKITKE 138 >3C5C-A nrPDB Length = 187 Score = 105 bits (262), Expect = 1e-23, Method: Composition-based stats. Identities = 45/177 (25%), Positives = 70/177 (39%), Gaps = 18/177 (10%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 L ++G GK+ L + F F Y P + + Y ++ VD + V L + DTA + Sbjct: 24 LAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQPVHLRVMDTADLDTPR 83 Query: 68 RLRPLSYPDTDVILMCFSVDSPDSLENIP---EKWVPEVKHFCPNVPIILVANKKDLRSD 124 L+ +SVDS S ++ E K ++P +L+ NK D+ Sbjct: 84 NCER-YLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLGNKLDMAQY 142 Query: 125 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTK-EGVREVFETATRAALQ 180 V +G A+A R + E SA E V+ VF A R A + Sbjct: 143 RQ------------VTKAEGVALAGRFGCL-FFEVSACLDFEHVQHVFHEAVREARR 186 >2AL7-A nrPDB Length = 186 Score = 101 bits (253), Expect = 2e-22, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 61/162 (37%), Gaps = 14/162 (8%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 L +VG GKT + V + +F E +PTV N V V + +WD GQ + Sbjct: 25 LTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRK---VTKGNVTIKIWDIGGQPRFR 81 Query: 68 RLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSDEH 126 + + I+ + +E + + K +P++++ NK+DL + Sbjct: 82 SMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALD 141 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVR 168 + + +M + D I S K K+ + Sbjct: 142 EKQLIEKMNLSAI--QDREICCYSI--------SCKEKDNID 173 >4ILE-A nrPDB Length = 184 Score = 98.8 bits (245), Expect = 1e-21, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 57/162 (35%), Gaps = 14/162 (8%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 L +VG GKT + V + +F E +PTV N + V + LWD GQ + Sbjct: 25 LTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRK---ITKGNVTIKLWDIGGQPRFR 81 Query: 68 RLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSDEH 126 + I+ + +E + + K +P++++ NK+DL Sbjct: 82 SMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPG--A 139 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVR 168 + + K D I S K K+ + Sbjct: 140 LDEKELIEKMNLSAIQDREICCYSI--------SCKEKDNID 173 >1YZG-A nrPDB Length = 179 Score = 98.0 bits (243), Expect = 2e-21, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 5/119 (4%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 K+++VG GKT +L F +E PT+ N + K +WD GQE Sbjct: 16 EHKVIIVGLDNAGKTTILYQFLMNEVVHT-SPTIGSNVEEIVV---KNTHFLMWDIGGQE 71 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLR 122 Y +T+ I++ + L E+ + H +++ ANK+D++ Sbjct: 72 SLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMK 130 >4YLG-A nrPDB Length = 173 Score = 95.3 bits (236), Expect = 2e-20, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 5/141 (3%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 + ++++VG A GKT +L E +PT+ N V+ K + +WD Sbjct: 9 LGKKEMRILMVGLDAAGKTSILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDV 64 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKK 119 GQ+ L Y +T I+ + D + E+ + + + N +++ ANK Sbjct: 65 GGQDKIRPLWRHYYQNTQAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAILLVFANKH 124 Query: 120 DLRSDEHVRTELARMKQEPVR 140 DL + ++ + ++ Sbjct: 125 DLPQAMSISEVTEKLGLQTIK 145 >2H16-A nrPDB Length = 183 Score = 93.4 bits (231), Expect = 5e-20, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 5/120 (4%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 K+++VG GKT +L FS +E PT+ N V +I ++ +WD GQE Sbjct: 22 EHKVIIVGLDNAGKTTILYQFSMNEVVHT-SPTIGSN-VEEIVIN--NTRFLMWDIGGQE 77 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRS 123 Y +T+ +++ + + E+ + H +++ ANK+D++ Sbjct: 78 SLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKE 137 >3LVQ-E nrPDB Length = 497 Score = 93.4 bits (231), Expect = 6e-20, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 5/124 (4%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 ++ +++++G A GKT +L + +PTV N V K V+ +WD Sbjct: 318 LSNKEMRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVGFNVE---TVTYKNVKFNVWDV 373 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKK 119 GQ+ L Y T ++ D ++ ++ + + I++ ANK+ Sbjct: 374 GGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQ 433 Query: 120 DLRS 123 DL Sbjct: 434 DLPD 437 >6FAE-B nrPDB Length = 213 Score = 92.6 bits (229), Expect = 1e-19, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 53/118 (44%), Gaps = 5/118 (4%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++++VG A GKT +L E +PT+ N V+ K + +WD GQ+ Sbjct: 51 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQDKI 106 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRS 123 L + +T ++ + + + E+ + + + + +++ ANK+DL + Sbjct: 107 RPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 164 >3LRP-A nrPDB Length = 181 Score = 92.6 bits (229), Expect = 1e-19, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 5/118 (4%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++++VG A GKT +L E +PT+ N V+ + + +WD GQ+ Sbjct: 19 RILMVGLDAAGKTTILYKVKLGEVVTT-IPTIGFNVE---TVEFRNISFTVWDVGGQDKI 74 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRS 123 L Y +TD ++ + + +++ E+ + + + I++ ANK+DL + Sbjct: 75 RPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDLPN 132 >3O47-A nrPDB Length = 329 Score = 91.8 bits (227), Expect = 2e-19, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 53/123 (43%), Gaps = 5/123 (4%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 ++++VG A GKT +L E +PT+ N V+ K + +WD Sbjct: 162 GKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVG 217 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKD 120 GQ+ L + +T ++ + + + E+ + + + + +++ ANK+D Sbjct: 218 GQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQD 277 Query: 121 LRS 123 L + Sbjct: 278 LPN 280 >1Z6X-A nrPDB Length = 180 Score = 91.4 bits (226), Expect = 2e-19, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 55/129 (42%), Gaps = 5/129 (3%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 + ++++VG A GKT +L E +PT+ N V+ K + +WD Sbjct: 14 GKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNICFTVWDVG 69 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPE-VKHFCPNVPIILVANKKD 120 GQ+ L + +T ++ + + ++ + ++ + + ++L ANK+D Sbjct: 70 GQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQD 129 Query: 121 LRSDEHVRT 129 L + + Sbjct: 130 LPNAMAISE 138 >2A5F-A nrPDB Length = 175 Score = 90.7 bits (224), Expect = 4e-19, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 5/120 (4%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 +++++G A GKT +L + +PTV N V K V+ +WD GQ+ Sbjct: 13 EMRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVGFNVE---TVTYKNVKFNVWDVGGQD 68 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRS 123 L Y T ++ D ++ ++ + + I++ ANK+DL Sbjct: 69 KIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPD 128 >3AQ4-A nrPDB Length = 184 Score = 90.3 bits (223), Expect = 5e-19, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 5/123 (4%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 A ++++VG A GKT +L E +PT+ N V+ K + +WD Sbjct: 17 AKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVG 72 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKD 120 GQ+ L + +T ++ + D + ++ + + + +++ ANK+D Sbjct: 73 GQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQD 132 Query: 121 LRS 123 L + Sbjct: 133 LPN 135 >5NZV-F nrPDB Length = 181 Score = 89.9 bits (222), Expect = 6e-19, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 5/120 (4%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 ++++VG GKT +L E +PT+ N V K + +WD GQ+ Sbjct: 17 EMRILMVGLDGAGKTTVLYKLKLGEVITT-IPTIGFNVE---TVQYKNISFTVWDVGGQD 72 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRS 123 L Y +T+ ++ + + E + + N ++ ANK+DL Sbjct: 73 RIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQDLPE 132 >6BBQ-A nrPDB Length = 520 Score = 88.7 bits (219), Expect = 1e-18, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 5/120 (4%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 +++++G A GKT +L + +PTV N V K V+ +WD G + Sbjct: 359 EMRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVGFNVE---TVTYKNVKFNVWDVGGLD 414 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRS 123 L Y T ++ D ++ ++ + + I++ ANK+DL Sbjct: 415 KIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPD 474 >6DFF-C nrPDB Length = 193 Score = 88.7 bits (219), Expect = 1e-18, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 5/120 (4%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 ++++VG A GKT +L E +PT+ N V+ K + +WD G + Sbjct: 29 EMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGLD 84 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRS 123 L + +T ++ + + + E+ + + + + +++ ANK+DL + Sbjct: 85 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 144 >1J2J-A nrPDB Length = 166 Score = 88.4 bits (218), Expect = 2e-18, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 52/118 (44%), Gaps = 5/118 (4%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++++VG A GKT +L E +PT+ N V+ K + +WD G + Sbjct: 4 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGLDKI 59 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRS 123 L + +T ++ + + + E+ + + + + +++ ANK+DL + Sbjct: 60 RPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 117 >2B6H-A nrPDB Length = 192 Score = 88.0 bits (217), Expect = 3e-18, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 55/129 (42%), Gaps = 5/129 (3%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 + ++++VG A GKT +L E +PT+ N V+ K + +WD Sbjct: 26 GKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNICFTVWDVG 81 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKH-FCPNVPIILVANKKD 120 GQ+ L + +T ++ + + ++ ++ ++ + +++ ANK+D Sbjct: 82 GQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQD 141 Query: 121 LRSDEHVRT 129 + + V Sbjct: 142 MPNAMPVSE 150 >5UF8-A nrPDB Length = 181 Score = 87.6 bits (216), Expect = 3e-18, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 5/120 (4%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 ++++VG A GKT +L E +PT+ N V+ K + +WD GQ+ Sbjct: 17 EMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQD 72 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRS 123 L + +T I+ + D + E+ + + + +++ ANK+DL + Sbjct: 73 KIRPLWRYYFQNTQGIIFVVDSNDRDRIAEAREELQQMLNEDELRDALLLVFANKQDLPN 132 >4ZI3-A nrPDB Length = 190 Score = 84.9 bits (209), Expect = 2e-17, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 73/177 (41%), Gaps = 15/177 (8%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 +++++G GKT LL + ++ PT N + ++ G +L +WD GQ Sbjct: 19 RILLLGLDNAGKTTLLKQLASEDISH-ITPTQGFN-IKSVQSQG--FKLNVWDIGGQRKI 74 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN-VPIILVANKKDLRSDE 125 + +TD+++ E ++ ++ + VP+++ ANK+DL Sbjct: 75 RPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDL---- 130 Query: 126 HVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 182 + A E + R +IQ+ CSA T EGV++ + K+ Sbjct: 131 -LTAAPASEIAEGLNLHTIRDRVWQIQS-----CSALTGEGVQDGMNWVCKNVNAKK 181 >5EE5-B nrPDB Length = 171 Score = 84.9 bits (209), Expect = 2e-17, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 65/179 (36%), Gaps = 15/179 (8%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 +++++G GKT +L E +PT+ N V K ++ +WD G Sbjct: 7 EMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVE---TVTYKNLKFQVWDLGGLT 62 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRS 123 Y +TD ++ D + + V + + +++ ANK+D+ Sbjct: 63 SIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDME- 121 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 182 +E+A P A++ + + + SA G+ E E ++ Sbjct: 122 QAMTSSEMANSLGLP---------ALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSRQ 171 >3IHW-A nrPDB Length = 184 Score = 83.7 bits (206), Expect = 4e-17, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 65/181 (35%), Gaps = 17/181 (9%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 K+ +VG+ + GK+ L+ + + + P + +I VDG+ L + D G Sbjct: 20 ELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGG-RFKKEIVVDGQSYLLLIRDEGGPP 78 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRS 123 + D ++ FS++ S + + ++ VP++LV + Sbjct: 79 EL-----QFAAWVDAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQ----- 128 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRY 183 ++ + R ++ ++ Y E A V VF+ + + R Sbjct: 129 -----DAISAANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKVVALRK 183 Query: 184 G 184 Sbjct: 184 K 184 >3BH6-A nrPDB Length = 164 Score = 81.4 bits (200), Expect = 2e-16, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 70/178 (39%), Gaps = 15/178 (8%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 +++++G GKT LL + ++ PT N + ++ G +L +WD Sbjct: 1 GGSEVRILLLGLDNAGKTTLLKQLASEDISH-ITPTQGFN-IKSVQSQG--FKLNVWDIG 56 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN-VPIILVANKKD 120 G + +TD+++ E ++ ++ + VP+++ ANK+D Sbjct: 57 GLRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQD 116 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAA 178 L + A E + R +IQ+ CSA T EGV++ + Sbjct: 117 L-----LTAAPASEIAEGLNLHTIRDRVWQIQS-----CSALTGEGVQDGMNWVCKNV 164 >5DE3-A nrPDB Length = 169 Score = 81.0 bits (199), Expect = 3e-16, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 21/177 (11%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 +++V+G GKT +L S+++ PT N + + DG L +WD GQ+ Sbjct: 1 ARILVLGLDNAGKTTILKALSEEDI-TTITPTQGFN-IKSLSRDG--FNLKIWDIGGQKS 56 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV----KHFCPNVPIILVANKKDL 121 + TD ++ + +DS DS + + E + VP+++ ANK+DL Sbjct: 57 IRPYWRNYFDQTDALI--YVIDSADS-KRLSESEFELTELLQEEKMTGVPLLVFANKQDL 113 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAA 178 V A + R +IQA CSAK G++E E + Sbjct: 114 -----VGALAADEIASTLDLTSIRDRPWQIQA-----CSAKQGTGLKEGMEWMMKQV 160 >1MOZ-A nrPDB Length = 183 Score = 80.7 bits (198), Expect = 4e-16, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 62/177 (35%), Gaps = 15/177 (8%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 +++++G GKT +L E PT+ N + K ++L +WD GQ Sbjct: 18 ELRILILGLDGAGKTTILYRLQIGEVVTT-KPTIGFNVE---TLSYKNLKLNVWDLGGQT 73 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRS 123 Y DT ++ D + ++ ++ + +++ ANK+D Sbjct: 74 SIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPG 133 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 A + + + + + I A SA EG+ E + + Sbjct: 134 ALS-----ASEVSKELNLVELKDRSWSIVA-----SSAIKGEGITEGLDWLIDVIKE 180 >1KSG-A nrPDB Length = 186 Score = 79.5 bits (195), Expect = 8e-16, Method: Composition-based stats. Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 15/162 (9%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 +L+++G GKT +L F E + PT+ N + +E G +L +WD GQ+ Sbjct: 18 ELRLLMLGLDNAGKTTILKKF-NGEDVDTISPTLGFN-IKTLEHRG--FKLNIWDVGGQK 73 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIP-EKWVPEVKHFCPNVPIILVANKKDLRS 123 + TD ++ +++ E V+ +++ ANK+DL Sbjct: 74 SLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPG 133 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKE 165 QE + D R+ RIQ CSA T E Sbjct: 134 ALS-----CNAIQEALELDSIRSHHWRIQG-----CSAVTGE 165 >4WNR-A nrPDB Length = 349 Score = 77.6 bits (190), Expect = 3e-15, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 65/176 (36%), Gaps = 20/176 (11%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 65 K+++VGDG GKT LL + F T N + K++++ WD GQE Sbjct: 43 KVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIKVNFWDFGGQEI 102 Query: 66 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDE 125 + ++ +DS + E W+ ++ F + P+++ NK D Sbjct: 103 MHATHQFFLSKRSLYILV--LDSRR--DEKAEYWLKHIRSFGGDSPVLVALNKIDENPSF 158 Query: 126 HVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 181 + + + K ++ + S K G+ E F + L K Sbjct: 159 ELNRKFLQEKYPSIK--------------GFFRISCKEDRGI-EGFSQKLKKELLK 199 >2IWR-A nrPDB Length = 178 Score = 77.6 bits (190), Expect = 3e-15, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 69/186 (37%), Gaps = 21/186 (11%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 +L V+GD GK+ L+ F + +V T E Y ++ VDG+ + + + AG Sbjct: 7 ELRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLIREEAGAP 65 Query: 65 DYDRLRPLSYPD-TDVILMCFSVDSPDSLENIPEK--WVPEVK-HFCPNVPIILVANKKD 120 D + D ++ FS++ +S + + + ++ + + LV + Sbjct: 66 DAK------FSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQ-- 117 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 ++ V RA+ ++ Y E A V VF+ + + Sbjct: 118 --------DRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVT 169 Query: 181 KRYGSQ 186 R Q Sbjct: 170 LRKQQQ 175 >6HLU-A nrPDB Length = 974 Score = 76.8 bits (188), Expect = 6e-15, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 62/184 (33%), Gaps = 26/184 (14%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-------IEVDG--KQVEL 55 K+ ++GDG GKT LL + F T N V +E D K+ Sbjct: 480 EIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLF 539 Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILV 115 WD GQE + V ++ ++ W+ ++ + P+I+V Sbjct: 540 HFWDFGGQEIMHASHQFFMTRSSVYMLLLD----SRTDSNKHYWLRHIEKYGGKSPVIVV 595 Query: 116 ANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETAT 175 NK D ++ + + + + S K +GV + ++ Sbjct: 596 MNKIDENPSYNIEQKKINERFPAIENR-------------FHRISCKNGDGVESIAKSLK 642 Query: 176 RAAL 179 A L Sbjct: 643 SAVL 646 >3DPU-A nrPDB Length = 535 Score = 76.0 bits (186), Expect = 9e-15, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 62/184 (33%), Gaps = 26/184 (14%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-------IEVDG--KQVEL 55 K+ ++GDG GKT LL + F T N V +E D K+ Sbjct: 41 EIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLF 100 Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILV 115 WD GQE + V ++ ++ W+ ++ + P+I+V Sbjct: 101 HFWDFGGQEIMHASHQFFMTRSSVYMLLLD----SRTDSNKHYWLRHIEKYGGKSPVIVV 156 Query: 116 ANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETAT 175 NK D ++ + + + + S K +GV + ++ Sbjct: 157 MNKIDENPSYNIEQKKINERFPAIENR-------------FHRISCKNGDGVESIAKSLK 203 Query: 176 RAAL 179 A L Sbjct: 204 SAVL 207 >2H57-A nrPDB Length = 190 Score = 70.3 bits (171), Expect = 5e-13, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 47/122 (38%), Gaps = 11/122 (9%) Query: 8 LVVVGDGACGKTCLLIVFS-KDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++ +G GKT ++ + + +PT+ + + ++D +GQ Y Sbjct: 24 VLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEKF---KSSSLSFTVFDMSGQGRY 80 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKW-----VPEVKHFCPNVPIILVANKKDL 121 L Y + I+ + E+ P++KH +PI+ ANK DL Sbjct: 81 RNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRR--IPILFFANKMDL 138 Query: 122 RS 123 R Sbjct: 139 RD 140 >4V0N-A nrPDB Length = 169 Score = 70.3 bits (171), Expect = 5e-13, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 5/123 (4%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFS-KDEFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 A+ + ++VVG GKT ++ + PTV EV+ + ++D Sbjct: 3 ASKKVNVLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVGFTVD---EVEKGPLTFTVFDM 59 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKH-FCPNVPIILVANKK 119 +G Y L Y + D ++ + ++ +KH VPI+ ANKK Sbjct: 60 SGAGRYRTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYFANKK 119 Query: 120 DLR 122 DL Sbjct: 120 DLP 122 >2X77-A nrPDB Length = 189 Score = 67.6 bits (164), Expect = 3e-12, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 65/184 (35%), Gaps = 15/184 (8%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 A + +++++G GKT +L + V + K + +WD Sbjct: 19 ADRKIRVLMLGLDNAGKTSILYRLHLGDVVTTVP----TVGVNLETLQYKNISFEVWDLG 74 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKD 120 GQ + DTD ++ D + + + + +++ ANK+D Sbjct: 75 GQTGVRPYWRCYFSDTDAVIYVVDSTDRDRMGVAKHELYALLDEDELRKSLLLIFANKQD 134 Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 L +E +Q V + R + ++ S+KT +G+ E + + Sbjct: 135 LPD---AASEAEIAEQLGVSSIMNRTWTI-------VKSSSKTGDGLVEGMDWLVERLRE 184 Query: 181 KRYG 184 + G Sbjct: 185 QGLG 188 >2GAO-A nrPDB Length = 208 Score = 64.1 bits (155), Expect = 4e-11, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 61/176 (34%), Gaps = 9/176 (5%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 KLV +G GKT LL + D +VPT+ ++ + G + +D G E Sbjct: 37 KLVFLGLDNAGKTTLLHMLKDDRLG-QHVPTLHPT-SEELTIAG--MTFTTFDLGGHEQA 92 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSL-ENIPEKWVPEVKHFCPNVPIILVANKKDLRSDE 125 R+ P + I+ L E+ E NVPI+++ NK D Sbjct: 93 RRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAI 152 Query: 126 HVRTELARMKQEPVRTDDGRAMAVRIQAYDYLE---CSAKTKEGVREVFETATRAA 178 T G + A +E CS ++G E F ++ Sbjct: 153 SEEKLREIFGLYGQTTGKGNVTLKELNARP-MEVFMCSVLKRQGYGEGFRWLSQYI 207 >1M2O-B nrPDB Length = 190 Score = 62.2 bits (150), Expect = 1e-10, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 66/180 (36%), Gaps = 22/180 (12%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFP---EVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 KL+ +G GKT LL + D + PT E + ++ +D G Sbjct: 25 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAI-------GNIKFTTFDLGGH 77 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKW-----VPEVKHFCPNVPIILVANK 118 RL +P+ + I+ P+ + + + E+K +VP +++ NK Sbjct: 78 IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELK----DVPFVILGNK 133 Query: 119 KDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAA 178 D + V R + T + + + ++ CS + G E F+ ++ Sbjct: 134 IDAPN--AVSEAELRSALGLLNTTGSQRIEGQRPVEVFM-CSVVMRNGYLEAFQWLSQYI 190 >6GNI-B nrPDB Length = 167 Score = 61.8 bits (149), Expect = 2e-10, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 64/174 (36%), Gaps = 22/174 (12%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFP---EVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 KL+ +G GKT LL + D + PT E + ++ +D G Sbjct: 3 KLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAI-------GNIKFTTFDLGGH 55 Query: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKW-----VPEVKHFCPNVPIILVANK 118 RL +P+ + I+ P+ + + + E+K +VP +++ NK Sbjct: 56 IQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELK----DVPFVILGNK 111 Query: 119 KDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFE 172 D + V R + T + + + ++ CS + G E F+ Sbjct: 112 IDAPN--AVSEAELRSALGLLNTTGSQRIEGQRPVEVFM-CSVVMRNGYLEAFQ 162 >4BAS-A nrPDB Length = 199 Score = 59.1 bits (142), Expect = 1e-09, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 64/191 (33%), Gaps = 29/191 (15%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYV-PTVFENYVADIEVDGKQVELALWDT 60 + + ++V+ G GKT ++ + ++ TV N + +V ++D Sbjct: 14 SKTKLQVVMCGLDNSGKTTIINQVKPAQSSSKHITATVGYNVETF---EKGRVAFTVFDM 70 Query: 61 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC--------PNVPI 112 G + + L Y + D ++ L + + +KH VP Sbjct: 71 GGAKKFRGLWETYYDNIDAVIFVVDSSDHLRLCVVKSEIQAMLKHEDIRRELPGGGRVPF 130 Query: 113 ILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDY-LECS-AKTKEGVREV 170 + ANK D A + + + + + + + S GV E Sbjct: 131 LFFANKMD-----------AAGAKTAAELVEILDLTTLMGDHPFVIFASNGLKGTGVHEG 179 Query: 171 F----ETATRA 177 F ETA+R Sbjct: 180 FSWLQETASRQ 190 >1F6B-A nrPDB Length = 198 Score = 59.1 bits (142), Expect = 1e-09, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 60/176 (34%), Gaps = 9/176 (5%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 KLV +G GKT LL + D +VPT+ ++ + G + +D G Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDRLG-QHVPTLHPT-SEELTIAG--MTFTTFDLGGHIQA 82 Query: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-PNVPIILVANKKDLRSDE 125 R+ P + I+ + L E+ + NVPI+++ NK D Sbjct: 83 RRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAI 142 Query: 126 HVRTELARMKQEPVRTDDGRAMAVRIQAYD---YLECSAKTKEGVREVFETATRAA 178 T G + A ++ CS ++G E F + Sbjct: 143 SEERLREMFGLYGQTTGKGSVSLKELNARPLEVFM-CSVLKRQGYGEGFRWMAQYI 197 >5DI3-B nrPDB Length = 263 Score = 57.5 bits (138), Expect = 4e-09, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 16/156 (10%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 + ++G GKT LL + E PT N ++ + ++ ++D G ++ Sbjct: 7 IALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFN---STTLNEGKYKIEVFDLGGGKNIR 62 Query: 68 RLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSDEH 126 + + I+ P E ++ F + PI + ANK+DL + Sbjct: 63 GVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIFANKQDLPT--- 119 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAK 162 G +A +++ C+AK Sbjct: 120 --------AAPAAEVVKGLGLATCRNSHNVFPCTAK 147 >4C0K-A nrPDB Length = 423 Score = 57.2 bits (137), Expect = 5e-09, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 52/125 (41%), Gaps = 8/125 (6%) Query: 6 KKLVVVGDGACGKTCLLIVFS---KDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 62 K V+G GKT + F + T N + ++V G++ L L D Sbjct: 247 YKCHVIGPKGSGKTGMCRGFLVEDMHKLIGKEFKTNVVNCINSVQVYGQEKHLILRDIDV 306 Query: 63 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN-VPIILVANKKDL 121 + D L+P + DV + + +P S E + ++ K++ + +P+++V K D+ Sbjct: 307 RHALDPLQPQEV-NCDVACLVYDSSNPRSFEYVARIYI---KYYAESKIPVMIVGTKCDM 362 Query: 122 RSDEH 126 Sbjct: 363 DERRQ 367 >4M9Q-A nrPDB Length = 227 Score = 57.2 bits (137), Expect = 5e-09, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 16/156 (10%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 + ++G GKT LL + E PT N ++ + ++ ++D G ++ Sbjct: 7 IALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFN---STTLNEGKYKIEVFDLGGGKNIR 62 Query: 68 RLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSDEH 126 + + I+ P E ++ F + PI + ANK+DL + Sbjct: 63 GVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIFANKQDLPT--- 119 Query: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAK 162 G +A +++ C+AK Sbjct: 120 --------AAPAAEVVKGLGLATCRNSHNVFPCTAK 147 >4ARZ-A nrPDB Length = 310 Score = 55.6 bits (133), Expect = 1e-08, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 63/152 (41%), Gaps = 14/152 (9%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKD--EFPE-VYVPTVFENYVADIEVDGKQVELALWDTA 61 RKKL+++G GK+ + + + F T+ + + + L LWD Sbjct: 6 RKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLG--NMTLNLWDCG 63 Query: 62 GQE-----DYDRLRPLSYPDTDVILMCFSVDSPDSLENIP--EKWVPEVKHFCPNVPIIL 114 GQ+ + + + + V++ F V+S + L++I K + +++ + P+ I + Sbjct: 64 GQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFV 123 Query: 115 VANKKDL--RSDEHVRTELARMKQEPVRTDDG 144 + +K DL ++ ++ G Sbjct: 124 LLHKMDLVQLDKREELFQIMMKNLSETSSEFG 155 >2GJ9-A nrPDB Length = 172 Score = 52.9 bits (126), Expect = 9e-08, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 64/189 (33%), Gaps = 40/189 (21%) Query: 7 KLVVVGDGACGKTCLLIVFSKDE--FPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ- 63 K+V+ G GK+ LL + E T + I +DG L + DTAG Sbjct: 6 KVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMP--LHIIDTAGLR 63 Query: 64 ------EDYDRLRP-LSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVA 116 E R D +L + D+++ E W + +PI +V Sbjct: 64 EASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPA-EIWPEFIARLPAKLPITVVR 122 Query: 117 NKKDLRSDEHVRTELARMKQEPVRTDDGRAMAV-RIQAYDYLECSAKTKEGVREVFETAT 175 NK D+ G + + + + + SA+T EGV Sbjct: 123 NKADIT---------------------GETLGMSEVNGHALIRLSARTGEGVD-----VL 156 Query: 176 RAALQKRYG 184 R L++ G Sbjct: 157 RNHLKQSMG 165 >3GEH-A nrPDB Length = 462 Score = 52.5 bits (125), Expect = 1e-07, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 64/191 (33%), Gaps = 50/191 (26%) Query: 7 KLVVVGDGACGKTCLLIVFSKDE--FPEVYVPTVFENYVADIEVDGKQVELALWDTAG-- 62 K+ +VG GK+ LL +S+ + T + + + V G V + DTAG Sbjct: 226 KVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVVGGIPV--QVLDTAGIR 283 Query: 63 ----Q------EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWV---PEVKHFCPN 109 Q E + D++L+ W E+ + Sbjct: 284 ETSDQVEKIGVERSRQAAN----TADLVLLTID---------AATGWTTGDQEIYEQVKH 330 Query: 110 VPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVRE 169 P+ILV NK DL + + + + + +A K+G+ Sbjct: 331 RPLILVMNKIDLVEKQLITSLEYPENITQI-----------------VHTAAAQKQGIDS 373 Query: 170 VFETATRAALQ 180 + ETA +Q Sbjct: 374 L-ETAILEIVQ 383 >6CES-A nrPDB Length = 313 Score = 52.2 bits (124), Expect = 2e-07, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 58/157 (36%), Gaps = 14/157 (8%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEV---YVPTVFENYVADIEVDGKQVELALWD 59 A++KK++++G GKT + + + T+ + + + L LWD Sbjct: 5 AMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLG--NLVLNLWD 62 Query: 60 TAGQE-----DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKW--VPEVKHFCPNVPI 112 GQ+ + R + + +V++ F V+S + +++ + + P+ I Sbjct: 63 CGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKI 122 Query: 113 ILVANKKDL--RSDEHVRTELARMKQEPVRTDDGRAM 147 + +K DL + + + A Sbjct: 123 FCLVHKMDLVQEDQRDLIFKEREEDLRRLSRPLECAC 159 >2LKD-A nrPDB Length = 178 Score = 51.4 bits (122), Expect = 2e-07, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 64/165 (38%), Gaps = 26/165 (15%) Query: 17 GKTCLL--IVFSKDEFPEVYVPT--VFENYVADIEVDGKQVELALWDTAGQEDYDRLRPL 72 GKT LL I SK E T + + V+ K++ DT G E + +R Sbjct: 20 GKTTLLDAIRHSKVTEQEAGGITQHIGA---YQVTVNDKKITF--LDTPGHEAFTTMRAR 74 Query: 73 SYPDTDVILMCFSVDS---PDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRT 129 TD++++ + D P ++E I NVPII+ NK D R Sbjct: 75 GAQVTDIVILVVAADDGVMPQTVEAINH-------AKAANVPIIVAINKMDKPEANPDRV 127 Query: 130 ELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETA 174 M+ V + G + + SAKTKEG+ + E Sbjct: 128 MQELMEYNLVPEEWG-------GDTIFCKLSAKTKEGLDHLLEMI 165 >6GDG-D nrPDB Length = 248 Score = 50.6 bits (120), Expect = 5e-07, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 17/131 (12%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 +L+++G GK+ ++ + +VD +V ++D GQ Sbjct: 35 THRLLLLGADNSGKSTIVKQMRILHGGSGGSGGTSGIFETKFQVD--KVNFHMFDVGGQR 92 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIP--------EKWVPEVKHFCPNVPIILVA 116 D R + D I+ + L+ +W+ + +IL Sbjct: 93 DERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNLFKSIWNNRWLR-------TISVILFL 145 Query: 117 NKKDLRSDEHV 127 NK+DL +++ + Sbjct: 146 NKQDLLAEKVL 156 >6IAE-A nrPDB Length = 223 Score = 49.1 bits (116), Expect = 1e-06, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 67/212 (31%), Gaps = 38/212 (17%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVF--SKDEFPEVYVPTVFENYVA-DIEVDG------- 50 M+ K++V+G GK+ + ++D + Y T + +I +D Sbjct: 5 MSDDLVKILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVEIALDDTRRSGRQ 64 Query: 51 ----KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHF 106 K+ + LWD G + P + D I+ F+ + S + + W Sbjct: 65 AAGLKKAVVQLWDVGGSSKHQAGWPAIASNADGIIYVFNPEVKGSEKELL-LWYKNFAL- 122 Query: 107 CPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGR-----------AMAVRIQAYD 155 N+ +L D + + + M ++Q Sbjct: 123 ----------NQDELDDDNNFKMRVTDGHSLIFSHHSSLPEFAVGDNAIPPMPKQLQGIR 172 Query: 156 YLECSAK-TKEGVREVFETATRAALQKRYGSQ 186 LE S + +E F+ + R ++ Sbjct: 173 ALETSLDYQSDNFKEAFDALVEQIIASRLAAE 204 >3T1O-A nrPDB Length = 198 Score = 49.1 bits (116), Expect = 1e-06, Method: Composition-based stats. Identities = 47/197 (23%), Positives = 75/197 (38%), Gaps = 33/197 (16%) Query: 3 AIRKKLVVVGDGACGKTC-LLIVFSKD---------EFPEVYVPTVFENYV-ADI-EVDG 50 I K+V G G GKT L ++SK T+F +++ DI EV G Sbjct: 12 EINFKIVYYGPGLSGKTTNLKWIYSKVPEGRKGEMVSLATEDERTLFFDFLPLDIGEVKG 71 Query: 51 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSV------DSPDSLENIPEKWVPEVK 104 + L+ GQ Y+ R L D I+ + +S+ N+ E + E Sbjct: 72 FKTRFHLYTVPGQVFYNASRKLILRGVDGIVFVADSAPNRLRANAESMRNMREN-LAEYG 130 Query: 105 HFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTK 164 +VPI++ NK+DL + + RA+ + LE A Sbjct: 131 LTLDDVPIVIQVNKRDLPD--------------ALPVEMVRAVVDPEGKFPVLEAVATEG 176 Query: 165 EGVREVFETATRAALQK 181 +GV E + +R L + Sbjct: 177 KGVFETLKEVSRLVLAR 193 >2YWH-A nrPDB Length = 600 Score = 48.3 bits (114), Expect = 2e-06, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 57/181 (31%), Gaps = 35/181 (19%) Query: 17 GKTCLLIVF-------SKDEFPEVYVPTVFENYVADIEV------------DGKQVELAL 57 GK+ L S+ E E + T+ I V DG +L L Sbjct: 18 GKSTLADRLLEYTGAISEREKREQLLDTLDVERERGITVKMQAVRMFYKAKDGNTYKLHL 77 Query: 58 WDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVAN 117 DT G D+ + + L+ + + W K ++ II V N Sbjct: 78 IDTPGHVDFSYEVSRALAACEGALLLIDASQGIEAQTVANFW----KAVEQDLVIIPVIN 133 Query: 118 KKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRA 177 K DL S + R + + + ++ + SAK G+ E+ E Sbjct: 134 KIDLPSADVDRVKKQIEEVLGLDPEEA------------ILASAKEGIGIEEILEAIVNR 181 Query: 178 A 178 Sbjct: 182 I 182 >2DYK-A nrPDB Length = 161 Score = 47.9 bits (113), Expect = 3e-06, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 44/127 (34%), Gaps = 19/127 (14%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAG-- 62 K+V+VG GK+ L K V + + V+ + L DT G Sbjct: 1 MHKVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRGRFLLVDTGGLW 60 Query: 63 ---------QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPII 113 QE DR D ++ F+VD L + ++ P+I Sbjct: 61 SGDKWEKKIQEKVDRALE------DAEVVLFAVDGRAELTQADYEVAEYLRRKGK--PVI 112 Query: 114 LVANKKD 120 LVA K D Sbjct: 113 LVATKVD 119 >1MKY-A nrPDB Length = 439 Score = 47.9 bits (113), Expect = 3e-06, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 58/179 (32%), Gaps = 34/179 (18%) Query: 7 KLVVVGDGACGKTCLLIVFSKDE--FPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 K+ +VG GK+ L E T + ++ +DG++ DTAG Sbjct: 182 KVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVF--VDTAGLR 239 Query: 65 DYDRLRP------LSYP------DTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPI 112 R+ P +Y DV+++ + ++ + E + Sbjct: 240 RKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRAS---- 295 Query: 113 ILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDY---LECSAKTKEGVR 168 ++V NK DL R + + + ++ DY + SA + Sbjct: 296 VVVFNKWDLVVHREKRYD-----------EFTKLFREKLYFIDYSPLIFTSADKGWNID 343 Score = 42.5 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 62/189 (32%), Gaps = 40/189 (21%) Query: 8 LVVVGDGACGKTCLLIVFSKDE--FPEVYVPTVFENYVADIEVDGKQVELALWDTAG--- 62 +++VG GK+ L K + E + +E GK +L DT G Sbjct: 4 VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKL--VDTCGVFD 61 Query: 63 ------QEDYDRLRPLSYPDTDVILMCFS----VDSPDSLENIPEKWVPEVKHFCPNVPI 112 + + + D++L + D E++ + V Sbjct: 62 NPQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKED--ESLADFLRK------STVDT 113 Query: 113 ILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFE 172 ILVANK E++R +K E G + V SA+ + + E Sbjct: 114 ILVANKA-----ENLREFEREVKPELYSLGFGEPIPV----------SAEHNINLDTMLE 158 Query: 173 TATRAALQK 181 T + +K Sbjct: 159 TIIKKLEEK 167 >6G79-A nrPDB Length = 225 Score = 47.5 bits (112), Expect = 3e-06, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 68/208 (32%), Gaps = 32/208 (15%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 AA KL+++G GK+ ++ + + + K + L+D Sbjct: 27 AAKDVKLLLLGADNSGKSTIVKQ--MKIIHGGSGGSGGTTGIVETHFTFKNLHFRLFDVG 84 Query: 62 GQEDYDRLRPLSYPDTDVILMCFSVDSPDS-------LENIPEKWVPEVKHFCPNVPIIL 114 GQ + + D I+ C + + ++I F + IIL Sbjct: 85 GQRSERKKWIHCFEDVTAIIFCVDLSDYNRMHESLMLFDSICNN------KFFIDTSIIL 138 Query: 115 VANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQA-------------YDYLECSA 161 NKKDL ++ ++ L E + A IQA Y ++ C A Sbjct: 139 FLNKKDLFGEKIKKSPLTICFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCHMTC-A 197 Query: 162 KTKEGVREVFETATRAALQKRYGSQNGC 189 + +F+ T + GC Sbjct: 198 TDTNNAQVIFDAVTDIIIANN---LRGC 222 >1XZP-A nrPDB Length = 482 Score = 46.4 bits (109), Expect = 8e-06, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 64/195 (32%), Gaps = 32/195 (16%) Query: 7 KLVVVGDGACGKTCLLIVFSKDE--FPEVYVPTVFENYVADIEVDGKQVELALWDTAG-- 62 ++V+VG GK+ LL ++ T + +I + G + + DTAG Sbjct: 245 RMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRG--ILFRIVDTAGVR 302 Query: 63 ------QEDYDRLRPLS-YPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILV 115 E R L D++L SP E+ ++ N ++V Sbjct: 303 SETNDLVERLGIERTLQEIEKADIVLFVLDASSPLDEED------RKILERIKNKRYLVV 356 Query: 116 ANKKD----LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 NK D + +E + G + ++ Y E +E+F Sbjct: 357 INKVDVVEKINEEEIKNKLGTDRHMVKISALKGEGLEKLEESI-YRET--------QEIF 407 Query: 172 ETATRAALQKRYGSQ 186 E + + + Q Sbjct: 408 ERGSDSLITNLRQKQ 422 >5LAD-A nrPDB Length = 404 Score = 46.0 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 48/135 (35%), Gaps = 20/135 (14%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKD--EFPEVYVPTVFENYVADIEV-DGKQVELALW 58 A R+ +VV G GK+ + Y T + +E+ V L Sbjct: 6 AGFRRYIVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTTTDPVYKSMELYPVGPVTL--V 63 Query: 59 DTAGQEDYDRL--------RPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNV 110 DT G +D L R + Y D ++ P E+ E++ + Sbjct: 64 DTPGLDDVGELGRLRVEKARRVFYR-ADCGILVTD-SEPTPYEDDVVNLFKEME-----I 116 Query: 111 PIILVANKKDLRSDE 125 P ++V NK D+ ++ Sbjct: 117 PFVVVVNKIDVLGEK 131 >5YMX-A nrPDB Length = 203 Score = 46.0 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 71/196 (36%), Gaps = 36/196 (18%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDE-----------FPEVYVPTVFENY--VADIEVD 49 I K+V G G CGKT L + ++ T+F ++ ++ E+ Sbjct: 10 EINCKIVYYGPGLCGKTTNL-QYIYNKTAAETKGKLISLSTETDRTLFFDFLPLSLGEIR 68 Query: 50 GKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSV------DSPDSLENIPEKWVPEV 103 G + L+ GQ YD R L D ++ + +SLEN+ + Sbjct: 69 GFKTRFHLYTVPGQVFYDASRKLILKGVDGVVFVADSQIERMEANMESLENLRINLAEQ- 127 Query: 104 KHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKT 163 + +P ++ NK+DL + V ++ R A+ + + A T Sbjct: 128 GYDLNKIPYVIQYNKRDLPN--------------AVTVEEMRK-ALNHRNIPEYQAVAPT 172 Query: 164 KEGVREVFETATRAAL 179 GV + + + L Sbjct: 173 GVGVFDTLKAVAKLVL 188 >1WF3-A nrPDB Length = 301 Score = 45.6 bits (107), Expect = 1e-05, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 70/207 (33%), Gaps = 36/207 (17%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVY-VPTVFENYVADIEVDGKQVELALWDTAG---- 62 + +VG GK+ LL + + P + I +G++ ++ DT G Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRR-QIVFVDTPGLHKP 68 Query: 63 ---------QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPII 113 QE Y+ L D + ++ + P + E+ E +K VPI+ Sbjct: 69 MDALGEFMDQEVYEALA-----DVNAVVWVVDLRHPPTPED--ELVARALKPLVGKVPIL 121 Query: 114 LVANKKDLRSDEHVRTE-------------LARMKQEPVRTDDGRAMAVRIQAYDYL-EC 159 LV NK D + L+ + + V +A+ + + E Sbjct: 122 LVGNKLDAAKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLALMPEGPFFYPED 181 Query: 160 SAKTKEGVREVFETATRAALQKRYGSQ 186 AK+ + E R KR + Sbjct: 182 YAKSDQTFGEWVAEILREEAMKRLWHE 208 >3J8G-X nrPDB Length = 490 Score = 45.6 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 75/191 (39%), Gaps = 35/191 (18%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVP--TVFENYVADIEVDGKQVELALWDT 60 ++ KL +VG GK+ L +E VY T ++ +E DG++ L DT Sbjct: 200 SLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLI--DT 257 Query: 61 AG----------QEDYDRLRPL-SYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN 109 AG E + ++ L + D +V+++ +D+ + + + + + + + Sbjct: 258 AGVRKRGKITDAVEKFSVIKTLQAIEDANVVMLV--IDAREGISDQDLSLLGFILNSGRS 315 Query: 110 VPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDY---LECSAKTKEG 166 + I++ NK D + V+ + R+ D+ SA G Sbjct: 316 LVIVV--NKWD-------------GLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSG 360 Query: 167 VREVFETATRA 177 V +FE+ A Sbjct: 361 VGNLFESVREA 371 Score = 32.5 bits (73), Expect = 0.10, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 13/129 (10%) Query: 8 LVVVGDGACGKTCLLIVF--SKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE- 64 + +VG GK+ L ++D + + E++G++ + + DT G + Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREF-ICI-DTGGIDG 62 Query: 65 -----DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKK 119 + + ++ F VD+ L E ++ P LVANK Sbjct: 63 TEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAIAKHLRSREK--PTFLVANKT 120 Query: 120 D-LRSDEHV 127 D L D+ V Sbjct: 121 DGLDPDQAV 129 >3GEE-A nrPDB Length = 476 Score = 45.2 bits (106), Expect = 2e-05, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 8/119 (6%) Query: 9 VVVGDGACGKTCLLIVFS-KDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 V+ G GK+ LL ++ ++P +Y+ + + K + L DTAG + Sbjct: 237 VIAGKPNAGKSTLLNTLLGQERAIVSHMPGTTRDYIEECFIHDKTM-FRLTDTAGLREAG 295 Query: 68 ------RLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKD 120 +R + L+ + +D + + E+K P + VANK D Sbjct: 296 EEIEHEGIRRSRMKMAEADLILYLLDLGTERLDDELTEIRELKAAHPAAKFLTVANKLD 354 >5IMR-C nrPDB Length = 610 Score = 44.1 bits (103), Expect = 4e-05, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 35/181 (19%) Query: 17 GKTCLLIVF-------SKDEFPEVYVPTVFENYVADIEV------------DGKQVELAL 57 GK+ L S E E ++ ++ I + DG++ L Sbjct: 21 GKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDGEEYVFHL 80 Query: 58 WDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVAN 117 DT G D+ + + +L+ E + + ++ ++H +P+I N Sbjct: 81 IDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYMA-LEHGHVIIPVI---N 136 Query: 118 KKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRA 177 K DL + + L + + D+ + S KT EGV E+ E + Sbjct: 137 KIDLPNARPLEVALEVEEVLGLPADEA------------IFASGKTGEGVEEILEAIVQR 184 Query: 178 A 178 Sbjct: 185 I 185 >5J8B-z nrPDB Length = 679 Score = 44.1 bits (103), Expect = 4e-05, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 35/181 (19%) Query: 17 GKTCLLIVF-------SKDEFPEVYVPTVFENYVADIEV------------DGKQVELAL 57 GK+ L S E E ++ ++ I + DG++ L Sbjct: 90 GKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDGEEYVFHL 149 Query: 58 WDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVAN 117 DT G D+ + + +L+ E + + ++ ++H +P+I N Sbjct: 150 IDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYMA-LEHGHVIIPVI---N 205 Query: 118 KKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRA 177 K DL + + L + + D+ + S KT EGV E+ E + Sbjct: 206 KIDLPNARPLEVALEVEEVLGLPADEA------------IFASGKTGEGVEEILEAIVQR 253 Query: 178 A 178 Sbjct: 254 I 254 >5DN8-A nrPDB Length = 446 Score = 43.7 bits (102), Expect = 6e-05, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 62/179 (34%), Gaps = 25/179 (13%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVP--TVFENYVADIEVDGKQVELALWDTAGQE 64 K+ ++G GK+ L+ +E VY T ++ + + L DTAG Sbjct: 180 KIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLI--DTAGIR 237 Query: 65 DYDRLRPL--------SYPDTDVI-LMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILV 115 +++ S ++ F +D+ + + + + ++ I + Sbjct: 238 RRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVEAGVSLIIAV- 296 Query: 116 ANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETA 174 NK D L +++ VR R M A Y SA GV ++F Sbjct: 297 -NKWD---------GLNIEERDNVRNAIDRRMPFVDFARRYF-ISALHGTGVGKLFRAI 344 Score = 27.1 bits (59), Expect = 4.9, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 8/60 (13%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTV-FENYVAD---IEVDGKQVELALWDTAGQ 63 + +VG GK+ L +K V V +D ++ L L DT G Sbjct: 8 IAIVGRPNVGKSTLFNYLTKSR--AALVADVPGVTRDRQYGETTIDSQR--LLLVDTGGL 63 >2Q3F-A nrPDB Length = 181 Score = 42.9 bits (100), Expect = 8e-05, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 18/188 (9%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDG----KQVELAL 57 ++ +++++G GK+ + V P T+F I + V + Sbjct: 1 GEVKPRILLMGLRRSGKSSIQKVVFHKMSPNE---TLFLESTNKICREDVSNSSFVNFQI 57 Query: 58 WDTAGQEDYDRLRPLS---YPDTDVILMCFSVDSPDSLENIPEKWVPEVKHF---CPNVP 111 WD GQ D+ + T ++ F +DS D + V ++ Sbjct: 58 WDFPGQIDFFDPTFDYEMIFRGTGALI--FVIDSQDDYMEALARLHLTVTRAYKVNTDIN 115 Query: 112 IILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 + +K D SD+H + Q DD + + S + E F Sbjct: 116 FEVFIHKVDGLSDDHKIETQRDIHQR--ANDDLADAGLEKIHLSFYLTSI-YDHSIFEAF 172 Query: 172 ETATRAAL 179 + + Sbjct: 173 SKVVQKLI 180 >3LLU-A nrPDB Length = 196 Score = 42.5 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 59/183 (32%), Gaps = 18/183 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDG----KQVELALWDTAG 62 +++++G GK+ + V P T+F I D V +WD G Sbjct: 22 RILLMGLRRSGKSSIQKVVFHKMSPNE---TLFLESTNKIYKDDISNSSFVNFQIWDFPG 78 Query: 63 QEDYDRLRPLS---YPDTDVILMCFSVDSPDSLENIPEKWVPEVKHF---CPNVPIILVA 116 Q D+ + T ++ + +D+ D + V P++ + Sbjct: 79 QMDFFDPTFDYEMIFRGTGALI--YVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFI 136 Query: 117 NKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 +K D SD+H + Q DD + + S + E F + Sbjct: 137 HKVDGLSDDHKIETQRDIHQR--ANDDLADAGLEKLHLSFYLTSI-YDHSIFEAFSKVVQ 193 Query: 177 AAL 179 + Sbjct: 194 KLI 196 >2GTP-A nrPDB Length = 323 Score = 42.1 bits (98), Expect = 1e-04, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 61/186 (32%), Gaps = 34/186 (18%) Query: 32 EVYVPTVFENYVADIEVDG--------KQVELALWDTAGQEDYDRLRPLSYPDTDVILMC 83 Y+PT + ++ G K + ++D GQ + + I+ C Sbjct: 134 PNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFC 193 Query: 84 -----FSVDSPDSLE-NIPEKWVPEVKHFCPN-----VPIILVANKKDLRSDEHVRTELA 132 + + + E N + + C N IIL NKKDL ++ ++ L Sbjct: 194 VALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLT 253 Query: 133 RMKQEPVRTDDGRAMAVRIQA--------------YDYLECSAKTKEGVREVFETATRAA 178 E ++ A IQ Y + C A + V+ VF+ T Sbjct: 254 ICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTC-ATDTKNVQFVFDAVTDVI 312 Query: 179 LQKRYG 184 ++ Sbjct: 313 IKNNLK 318 Score = 26.3 bits (57), Expect = 8.7, Method: Composition-based stats. Identities = 6/18 (33%), Positives = 12/18 (66%) Query: 7 KLVVVGDGACGKTCLLIV 24 KL+++G G GK+ ++ Sbjct: 4 KLLLLGAGESGKSTIVKQ 21 >6D4G-A nrPDB Length = 271 Score = 41.8 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 19/113 (16%) Query: 78 DVILMCFSVDS--PDSLENIPEKWVPEVKHFCPNV--PIILVANKKDLRSDEHVRTELAR 133 D L+ V + ++ K+V + + PI++V K D + ++R Sbjct: 163 DGFLLGIDVSRGMNRNFDD-QLKFVSNLYNQLAKTKKPIVIVLTKCDEGVERYIR----- 216 Query: 134 MKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRYGSQ 186 D A+ + +E SA++ V F T + + R ++ Sbjct: 217 ---------DAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLIDKSRGKTK 260 >6GB2-BC nrPDB Length = 657 Score = 41.8 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 23/157 (14%) Query: 17 GKTCLLIVFSKDEFPEVYVPTVFEN-----YVADIEVDGKQVELALWDTAGQEDYDRLRP 71 GKT LL F K + V T ++ + G+++ DT G + +R Sbjct: 122 GKTTLLDKFRKTQV--AAVETGGITQHIGAFLVSLP-SGEKITF--LDTPGHAAFSAMRA 176 Query: 72 LSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP-NVPIILVANKKDLRSDEHVRTE 130 TD++++ + D + ++ V ++H VPIIL NK D + + + Sbjct: 177 RGAQVTDIVVLVVAADDG-----VMKQTVESIQHAKDAQVPIILAVNKCDKAEADPEKVK 231 Query: 131 LARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGV 167 + + V D G +QA SA T + + Sbjct: 232 KELLAYDVVCEDYG----GDVQAVPV---SALTGDNL 261 >2ODE-A nrPDB Length = 350 Score = 41.8 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 61/194 (31%), Gaps = 48/194 (24%) Query: 32 EVYVPTVFENYVADIEVDG--------KQVELALWDTAGQEDYDRLRPLSYPDTDVILMC 83 Y+PT + ++ G K + ++D GQ + + I+ C Sbjct: 164 SNYIPTQQDVLRTRVKTTGIVETHFTFKDLYFKMFDVGGQRSERKKWIHCFEGVTAIIFC 223 Query: 84 -----FSVD------------SPDSLENI-PEKWVPEVKHFCPNVPIILVANKKDLRSDE 125 + + S ++I KW E IIL NKKDL ++ Sbjct: 224 VALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTE-------TSIILFLNKKDLFEEK 276 Query: 126 HVRTELARMKQEPVRTDDGRAMAVRIQA--------------YDYLECSAKTKEGVREVF 171 R+ L E ++ A IQ Y + C A + V+ VF Sbjct: 277 IKRSPLTICYPEYTGSNTYEEAAAYIQCQFEDLNRRKDTKEIYTHFTC-ATDTKNVQFVF 335 Query: 172 ETATRAALQKRYGS 185 + T ++ Sbjct: 336 DAVTDVIIKNNLKE 349 Score = 27.5 bits (60), Expect = 3.9, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 14/23 (60%) Query: 2 AAIRKKLVVVGDGACGKTCLLIV 24 AA KL+++G G GK+ ++ Sbjct: 29 AAKEVKLLLLGAGESGKSTIVKQ 51 >3CB4-D nrPDB Length = 599 Score = 41.4 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 46/133 (34%), Gaps = 22/133 (16%) Query: 49 DGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSV---DSPDSLENIPEKWVPEVKH 105 DG+ +L DT G D+ S + L+ +L N +++ Sbjct: 67 DGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMDLEV 126 Query: 106 FCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKE 165 VP++ NK DL + + R + D + CSAKT Sbjct: 127 ----VPVL---NKIDLPAADPERVAEEIEDIVGIDATDA------------VRCSAKTGV 167 Query: 166 GVREVFETATRAA 178 GV++V E R Sbjct: 168 GVQDVLERLVRDI 180 >2QAG-A nrPDB Length = 361 Score = 41.0 bits (95), Expect = 3e-04, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 10/65 (15%) Query: 8 LVVVGDGACGKTCLLIV-FSKDEFPEVYVPTVFENYVADIEVD---------GKQVELAL 57 L+VVG+ GK+ L+ F D +PE +P E ++++ G ++ L + Sbjct: 40 LMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLRLTV 99 Query: 58 WDTAG 62 DT G Sbjct: 100 VDTPG 104 >5KU1-A nrPDB Length = 424 Score = 41.0 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 17/128 (13%) Query: 6 KKLVVVGDGACGKT----CLLIVFS--KDEFPEVYVPTVFENYVADIEVDGKQVELALWD 59 + V+G CGK+ LL + + E + N + V G++ L L D Sbjct: 243 FRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSYYAIN---TVYVYGQEKYLLLHD 299 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN-VPIILVANK 118 + E + DV+ + + V +P S E + HF + +P ++VA K Sbjct: 300 ISESEFLTEAEIIC----DVVCLVYDVSNPKSFEYCARIFKQ---HFMDSRIPCLIVAAK 352 Query: 119 KDLRSDEH 126 DL + Sbjct: 353 SDLHEVKQ 360 >3FTQ-A nrPDB Length = 274 Score = 40.6 bits (94), Expect = 4e-04, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 10/65 (15%) Query: 8 LVVVGDGACGKTCLLIV-FSKDEFPEVYVPTVFENYVADIEVD---------GKQVELAL 57 L+VVG+ GK+ L+ F D +PE +P E ++++ G ++ L + Sbjct: 8 LMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLRLTV 67 Query: 58 WDTAG 62 DT G Sbjct: 68 VDTPG 72 >6CES-C nrPDB Length = 399 Score = 40.6 bits (94), Expect = 4e-04, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 18/187 (9%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDG----KQVELALW 58 + + +++++G GK + V P T+F I D V +W Sbjct: 59 SSKPRILLMGLRRSGKNSIQKVVFHKMSPNE---TLFLESTNKIYKDDISNSSFVNFQIW 115 Query: 59 DTAGQEDYDRLRPLS---YPDTDVILMCFSVDSPDSLENIPEKWVPEVKHF---CPNVPI 112 D GQ D+ + T ++ + +D+ D + V P++ Sbjct: 116 DFPGQMDFFDPTFDYEMIFRGTGALI--YVIDAQDDYMEALTRLHITVSKAYKVNPDMNF 173 Query: 113 ILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFE 172 + +K D SD+H + Q DD + + S + E F Sbjct: 174 EVFIHKVDGLSDDHKIETQRDIHQR--ANDDLADAGLEKLHLSFYLTSI-YDHSIFEAFS 230 Query: 173 TATRAAL 179 + + Sbjct: 231 KVVQKLI 237 >5KSO-A nrPDB Length = 190 Score = 40.6 bits (94), Expect = 4e-04, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 17/128 (13%) Query: 6 KKLVVVGDGACGKT----CLLIVFS--KDEFPEVYVPTVFENYVADIEVDGKQVELALWD 59 + V+G CGK+ LL + + E + N + V G++ L L D Sbjct: 9 FRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSYYAIN---TVYVYGQEKYLLLHD 65 Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN-VPIILVANK 118 + E + DV+ + + V +P S E + HF + +P ++VA K Sbjct: 66 ISESEFLTEAEIIC----DVVCLVYDVSNPKSFEYCARIFKQ---HFMDSRIPCLIVAAK 118 Query: 119 KDLRSDEH 126 DL + Sbjct: 119 SDLHEVKQ 126 >2E87-A nrPDB Length = 357 Score = 40.2 bits (93), Expect = 5e-04, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 61/188 (32%), Gaps = 38/188 (20%) Query: 8 LVVVGDGACGKTCLLIVFSKDE--FPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 65 +V+ G GK+ LL + + T N + + + DT G D Sbjct: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVG---QFEDGYFRYQIIDTPGLLD 226 Query: 66 YDRLRPLSYPD-------------TDVILMCFSVDSPDSL-ENIPEKWVPEVKHFCPNVP 111 RP+S + ++I+ F EV ++P Sbjct: 227 ----RPISERNEIEKQAILALRYLGNLIIYIFDPSEHCGFPLEEQIHLFEEVHGEFKDLP 282 Query: 112 IILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 ++V NK D+ +E+++ +K++ + ++ SA G+ V Sbjct: 283 FLVVINKIDVADEENIKRLEKFVKEKGLNP---------------IKISALKGTGIDLVK 327 Query: 172 ETATRAAL 179 E + Sbjct: 328 EEIIKTLR 335 >3C5H-A nrPDB Length = 255 Score = 40.2 bits (93), Expect = 6e-04, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 19/105 (18%) Query: 78 DVILMCFSVDS--PDSLENIPEKWVPEVKHFCPNV--PIILVANKKDLRSDEHVRTELAR 133 D L+ V + ++ K+V + + PI++V K D + ++R Sbjct: 164 DGFLLGIDVSRGMNRNFDD-QLKFVSNLYNQLAKTKKPIVVVLTKCDEGVERYIR----- 217 Query: 134 MKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAA 178 D A+ + +E SA++ V F T + Sbjct: 218 ---------DAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLI 253 >3V00-C nrPDB Length = 356 Score = 40.2 bits (93), Expect = 7e-04, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 60/187 (32%), Gaps = 34/187 (18%) Query: 31 PEVYVPTVFENYVADIEVDG--------KQVELALWDTAGQEDYDRLRPLSYPDTDVILM 82 YVPT + + ++ G K + ++D GQ + + I+ Sbjct: 166 TPGYVPTEQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTAIIF 225 Query: 83 C-----FSVDSPDSLE-NIPEKWVPEVKHFCPN-----VPIILVANKKDLRSDEHVRTEL 131 C + + + E N + + C N IIL NKKDL ++ ++ L Sbjct: 226 CVALSDYDLVLAEDEEMNRMHESMHLFNSICNNKWFTDTSIILFLNKKDLFEEKIKKSPL 285 Query: 132 ARMKQEPVRTDDGRAMAVRIQAYDYLE--------------CSAKTKEGVREVFETATRA 177 E + A +LE A + V+ VF+ T Sbjct: 286 TICYPE-YAGSNTYEEAGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVTDI 344 Query: 178 ALQKRYG 184 +++ Sbjct: 345 IIKENLK 351 Score = 26.7 bits (58), Expect = 7.3, Method: Composition-based stats. Identities = 6/18 (33%), Positives = 12/18 (66%) Query: 7 KLVVVGDGACGKTCLLIV 24 KL+++G G GK+ ++ Sbjct: 37 KLLLLGAGESGKSTIVKQ 54 >3R9W-A nrPDB Length = 307 Score = 39.8 bits (92), Expect = 7e-04, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 43/127 (33%), Gaps = 20/127 (15%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELAL--WDTAGQED 65 + +VG GK+ LL + P + + V E + DT G + Sbjct: 12 VAIVGKPNVGKSTLLNNLL-GTKVSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIYE 70 Query: 66 YDR----------LRPLSYPDTDVILMCFSVDS--PDSLENIPEKWVPEVKHFCPNVPII 113 + + S + DVIL E I + ++ + N P+I Sbjct: 71 PKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPL-----NKPVI 125 Query: 114 LVANKKD 120 +V NK D Sbjct: 126 VVINKID 132 >6D9H-A nrPDB Length = 355 Score = 39.4 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 33/193 (17%), Positives = 59/193 (30%), Gaps = 48/193 (24%) Query: 32 EVYVPTVFENYVADIEVDG--------KQVELALWDTAGQEDYDRLRPLSYPDTDVILMC 83 Y+PT + ++ G K + ++D Q + + I+ C Sbjct: 166 SDYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGAQRSERKKWIHCFEGVTAIIFC 225 Query: 84 -----FSVD------------SPDSLENI-PEKWVPEVKHFCPNVPIILVANKKDLRSDE 125 + + S ++I KW + IIL NKKDL ++ Sbjct: 226 VALSAYDLVLAEDEEMNRMHASMKLFDSICNNKWFT-------DTSIILFLNKKDLFEEK 278 Query: 126 HVRTELARMKQE--------------PVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVF 171 + L E + +D + Y + CS TK V+ VF Sbjct: 279 ITHSPLTICFPEYTGANKYDEAASYIQSKFEDLNKRKDTKEIYTHFTCSTDTK-NVQFVF 337 Query: 172 ETATRAALQKRYG 184 + T ++ Sbjct: 338 DAVTDVIIKNNLK 350 >3IZY-P nrPDB Length = 537 Score = 39.4 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 17/153 (11%) Query: 17 GKTCLLIVFSKDEFP--EVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSY 74 GKT LL K + E T G+++ DT G + +R Sbjct: 16 GKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLPSGEKITF--LDTPGHAAFSAMRARGT 73 Query: 75 PDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP-NVPIILVANKKDLRSDEHVRTELAR 133 TD++++ + D + ++ V ++H +VPI+L NK D + + + Sbjct: 74 QVTDIVILVVAADDG-----VMKQTVESIQHAKDAHVPIVLAINKCDKAEADPEKVKKEL 128 Query: 134 MKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEG 166 + + V D G + SA T E Sbjct: 129 LAYDVVCEDYG-------GDVQAVHVSALTGEN 154 >4DCU-A nrPDB Length = 456 Score = 39.1 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 61/195 (31%), Gaps = 25/195 (12%) Query: 9 VVVGDGACGKTCLLIVFSKDE--FPEVYVPTVFENYVADIEVDGKQVELALWDTAG---- 62 ++G GK+ L+ +E T + + ++ + DTAG Sbjct: 199 CLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQQE--FVIVDTAGMRKK 256 Query: 63 ------QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVA 116 E Y LR L D ++ V + +K + H +I+V Sbjct: 257 GKVYETTEKYSVLRALKAIDRSEVVAV--VLDGEEGIIEQDKRIAGYAHEAGKAVVIVV- 313 Query: 117 NKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 NK D + + ++ R + L SA TK+ + + + Sbjct: 314 NKWDAVDKDESTMKEFE--------ENIRDHFQFLDYAPILFMSALTKKRIHTLMPAIIK 365 Query: 177 AALQKRYGSQNGCIN 191 A+ Q +N Sbjct: 366 ASENHSLRVQTNVLN 380 Score = 31.0 bits (69), Expect = 0.35, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 16/123 (13%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVE--LALWDTAG--- 62 + +VG GK+ + + + V T I + + L DT G Sbjct: 26 VAIVGRPNVGKSTIFNRIAGERISIVED-TPGVT-RDRIYSSAEWLNYDFNLIDTGGIDI 83 Query: 63 -----QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVAN 117 + ++ + DVI+ F V+ + + E+ + + P++L N Sbjct: 84 GDEPFLAQIRQQAEIAMDEADVII--FMVNGREGVTAADEEVAKIL--YRTKKPVVLAVN 139 Query: 118 KKD 120 K D Sbjct: 140 KLD 142 >2CXX-A nrPDB Length = 190 Score = 39.1 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 65/203 (32%), Gaps = 48/203 (23%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAG----- 62 ++ G GK+ L+ + + P V IE++ K + + D G Sbjct: 4 IIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVT---RKIIEIEWKNHK--IIDMPGFGFMM 58 Query: 63 ------QEDYDRLRPLSY----PDTDVILMCFSVDSPDSLENIPEKWVPE---------- 102 QE + DV ++ + I ++W Sbjct: 59 GLPKEVQERIKDEIVHFIEDNAKNIDVAVLV---VDGKAAPEIIKRWEKRGEIPIDVEFY 115 Query: 103 --VKHFCPNVPIILVANKKD-LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLEC 159 ++ ++P I+ NK D +++ + V LA + P+ D ++ Sbjct: 116 QFLREL--DIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEID----------KVFIPI 163 Query: 160 SAKTKEGVREVFETATRAALQKR 182 SAK + + + +++ Sbjct: 164 SAKFGDNIERLKNRIFEVIRERQ 186 >4V7F-o nrPDB Length = 647 Score = 38.7 bits (89), Expect = 0.001, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 67/190 (35%), Gaps = 23/190 (12%) Query: 8 LVVVGDGACGKTCLLIVFSK-DEFPEVYVPTVFENYVADIEVDGKQVELALWDTAG---- 62 L++ G GK+ L +K D + Y T YV D K + DT G Sbjct: 170 LLICGYPNVGKSSFLRCITKSDVDVQPYAFTTKSLYVGHF--DYKYLRFQAIDTPGILDR 227 Query: 63 -QEDYDRLRPLS-YPDTDV--ILMCF-SVDSPDSLE-NIPEKWVPEVKHFCPNVPIILVA 116 E+ + + S Y + ++ F + K +K N +++V Sbjct: 228 PTEEMNNIEMQSIYAIAHLRSCVLYFMDLSEQCGFTIEAQVKLFHSIKPLFANKSVMVVI 287 Query: 117 NKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 NK D+ E + E A++ + + + + S + +E V EV A Sbjct: 288 NKTDIIRPEDLDEERAQLLESV----------KEVPGVEIMTSSCQLEENVMEVRNKACE 337 Query: 177 AALQKRYGSQ 186 L R ++ Sbjct: 338 KLLASRIENK 347 >3IEU-A nrPDB Length = 301 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 60/185 (32%), Gaps = 35/185 (18%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFP-EVYVPTVFENYVADIEVDGKQVELALWDTAGQ--E 64 + +VG GK+ LL + + + I +G + + DT G E Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYV-DTPGLHME 69 Query: 65 DYDRLRPLSYPDT-----DVILMCFSVDSPDSLENIPEKWVPE-----VKHFCPNVPIIL 114 + + L DV L+ F V+ +W P+ K P+IL Sbjct: 70 EKRAINRLMNKAASSSIGDVELVIFVVE--------GTRWTPDDEMVLNKLREGKAPVIL 121 Query: 115 VANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETA 174 NK D ++ + +A ++ D + SA+T V + Sbjct: 122 AVNKVDNVQEKADLLPHLQF------------LASQMNFLDIVPISAETGLNVDTI-AAI 168 Query: 175 TRAAL 179 R L Sbjct: 169 VRKHL 173 >5YT0-A nrPDB Length = 364 Score = 38.3 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 78/225 (34%), Gaps = 54/225 (24%) Query: 8 LVVVGDGACGKTCLL--IVFSKDEFPEVYVPT--VFENYVADIEVDGK--------QVEL 55 +VV+G GKT LL I + E T + + V ++ V+L Sbjct: 19 VVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKL 78 Query: 56 AL-----WDTAGQEDYDRLRPLSYPDTDVILMCFSVD---SPDSLENIPEKWVPEVKHFC 107 + DT G E + LR D ++ + P + E + + + E + Sbjct: 79 VIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEAL--ELLKERR--- 133 Query: 108 PNVPIILVANKKD-------------LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAY 154 VP ++ ANK D + + ++ + ++ V G+ + A Sbjct: 134 --VPFLIAANKIDRIPGWKPNPDAPFIETIRRQDPKVREILEQRVYEIVGKMYEAGLPAE 191 Query: 155 DYLEC------------SAKTKEGVREVFETATRAALQKRYGSQN 187 + SA+T EG+ E+ A A L + Y + Sbjct: 192 LFTRIKDFRRKIAIVPVSARTGEGIPEL--LAVLAGLTQTYLKER 234 >3EC1-A nrPDB Length = 369 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 15/98 (15%) Query: 100 VPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLEC 159 +P + F + PI+LV NK DL +L R + MA + C Sbjct: 89 IPGLPRFAADNPILLVGNKADLLPRSVKYPKLLRWMRR---------MAEELGLCPVDVC 139 Query: 160 --SAKTKEGVREVFETATRAALQKRYGSQNGCINCCKV 195 SA G+ +V E A + R G + C V Sbjct: 140 LVSAAKGIGMAKVME----AINRYREGGDVYVVGCTNV 173 >5KH0-A nrPDB Length = 396 Score = 37.5 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 20/143 (13%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDE--FPEVYVPTVFENYVADIEVDG-KQVELALW 58 RK + + G GK+ + E T + +E+ + L Sbjct: 5 GGFRKYIAITGRRNVGKSSFMNALIGQEVSIVSNVAGTTTDPVFKSMELSPVGPITLI-- 62 Query: 59 DTAGQEDYDRL--------RPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNV 110 DT G +D L + Y IL+ + P + E K E++ + Sbjct: 63 DTPGLDDVGELGIKRIKKAKKSLYRADCGILIVDDI--PGNFEEQIIKLFKELE-----I 115 Query: 111 PIILVANKKDLRSDEHVRTELAR 133 P + NK D E++ E + Sbjct: 116 PYFIAINKIDTIDHENIEKEYKK 138 >4ZKD-A nrPDB Length = 499 Score = 37.5 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 78/234 (33%), Gaps = 60/234 (25%) Query: 8 LVVVGDGACGKTCLLIVFSKD-------------EFPEVYVPT-------VFEN------ 41 + +GD GK+ LL D + P+ + +N Sbjct: 22 CLFLGDTNAGKSTLLGHLLYDLNEISMSSMRELQKKSSNLDPSSSNSFKVILDNTKTERE 81 Query: 42 -----YVADIEVDGKQV----ELALWDTAGQEDY---DRLRPLSYPDTDVILMCFSVDSP 89 + I+V+ + L L DT G Y + L + D +V ++ + Sbjct: 82 NGFSMFKKVIQVENDLLPPSSTLTLIDTPGSIKYFNKETLNSILTFDPEVYVLVIDC-NY 140 Query: 90 DSLENI---PEKWVPEVKH---------FCPNVPIILVANKKDLRSDEHVRTELARMKQE 137 DS E P + E+ C IIL+ NK DL S + R E+ + + Sbjct: 141 DSWEKSLDGPNNQIYEILKVISYLNKNSACKKHLIILL-NKADLISWDKHRLEMIQSELN 199 Query: 138 PVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRYGSQNGCIN 191 V ++ + ++ CS + + T + +Y S+ IN Sbjct: 200 YVLKEN---FQWTDAEFQFIPCSGLLGSNLNK-----TENITKSKYKSEFDSIN 245 >5FG3-A nrPDB Length = 623 Score = 37.5 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 78/225 (34%), Gaps = 54/225 (24%) Query: 8 LVVVGDGACGKTCLL--IVFSKDEFPEVYVPT--VFENYVADIEVDGK--------QVEL 55 +VV+G GKT LL I + E T + + V ++ V+L Sbjct: 19 VVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKL 78 Query: 56 AL-----WDTAGQEDYDRLRPLSYPDTDVILMCFSVD---SPDSLENIPEKWVPEVKHFC 107 + DT G E + LR D ++ + P + E + + + E + Sbjct: 79 VIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEAL--ELLKERR--- 133 Query: 108 PNVPIILVANKKD-------------LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAY 154 VP ++ ANK D + + ++ + ++ V G+ + A Sbjct: 134 --VPFLIAANKIDRIPGWKPNPDAPFIETIRRQDPKVREILEQRVYEIVGKMYEAGLPAE 191 Query: 155 DYLEC------------SAKTKEGVREVFETATRAALQKRYGSQN 187 + SA+T EG+ E+ A A L + Y + Sbjct: 192 LFTRIKDFRRKIAIVPVSARTGEGIPEL--LAVLAGLTQTYLKER 234 >5ZZM-A nrPDB Length = 426 Score = 37.5 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 63/186 (33%), Gaps = 43/186 (23%) Query: 8 LVVVGDGACGKTCLLIV------FSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 + +VG GK+ L ++ D+ PT+ D+ G+ V L DT Sbjct: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTL---RRIDVADVGETV---LADTV 253 Query: 62 GQEDYDRLRPLSY-----------PDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNV 110 G + R P ++L ENI + + Sbjct: 254 G---FIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEI 310 Query: 111 PIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREV 170 P +LV NK D+ D R + R ++ + V + SA+T G+ ++ Sbjct: 311 PTLLVMNKIDMLEDFEPRID---------RDEENKPNRVWL--------SAQTGAGIPQL 353 Query: 171 FETATR 176 F+ T Sbjct: 354 FQALTE 359 >5CYO-A nrPDB Length = 274 Score = 37.5 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 10/69 (14%) Query: 4 IRKKLVVVGDGACGKTCLLIVFSKDEFP-EVYVPTVFENYVADIEV---------DGKQV 53 ++VVG GK+ L+ K + + PT E IE+ G ++ Sbjct: 3 FEFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRM 62 Query: 54 ELALWDTAG 62 +L + DT G Sbjct: 63 KLTVIDTPG 71 >5G06-P nrPDB Length = 747 Score = 37.1 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 78/234 (33%), Gaps = 60/234 (25%) Query: 8 LVVVGDGACGKTCLLIVFSKD-------------EFPEVYVPT-------VFEN------ 41 + +GD GK+ LL D + P+ + +N Sbjct: 270 CLFLGDTNAGKSTLLGHLLYDLNEISMSSMRELQKKSSNLDPSSSNSFKVILDNTKTERE 329 Query: 42 -----YVADIEVDGKQV----ELALWDTAGQEDY---DRLRPLSYPDTDVILMCFSVDSP 89 + I+V+ + L L DT G Y + L + D +V ++ + Sbjct: 330 NGFSMFKKVIQVENDLLPPSSTLTLIDTPGSIKYFNKETLNSILTFDPEVYVLVIDC-NY 388 Query: 90 DSLENI---PEKWVPEVKH---------FCPNVPIILVANKKDLRSDEHVRTELARMKQE 137 DS E P + E+ C IIL+ NK DL S + R E+ + + Sbjct: 389 DSWEKSLDGPNNQIYEILKVISYLNKNSACKKHLIILL-NKADLISWDKHRLEMIQSELN 447 Query: 138 PVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRYGSQNGCIN 191 V ++ + ++ CS + + T + +Y S+ IN Sbjct: 448 YVLKEN---FQWTDAEFQFIPCSGLLGSNLNK-----TENITKSKYKSEFDSIN 493 >3T5D-A nrPDB Length = 274 Score = 36.7 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 9/70 (12%) Query: 2 AAIRKKLVVVGDGACGKTCLLIV-FSKDEFPEVY-------VPTVFENYVADIEVDGK-Q 52 + L+VVG+ GK+ L+ F D + Y TV + +G Q Sbjct: 5 SGFEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQ 64 Query: 53 VELALWDTAG 62 + L + DT G Sbjct: 65 LLLTIVDTPG 74 >1SHZ-A nrPDB Length = 340 Score = 36.7 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 52/161 (32%), Gaps = 30/161 (18%) Query: 51 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC--- 107 K + ++D GQ + + I+ C ++ D + + E H Sbjct: 178 KDLHFKMFDVGGQRSERKKWFECFEGVTAIIFCVALSDYD--QVLMEDRQTNRMHESMKL 235 Query: 108 ----------PNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQA---- 153 + IIL NKKDL ++ ++ L E ++ A IQ Sbjct: 236 FDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFED 295 Query: 154 ----------YDYLECSAKTKEGVREVFETATRAALQKRYG 184 Y + C A + V+ VF+ T ++ Sbjct: 296 LNKRKDTKEIYTHFTC-ATDTKNVQFVFDAVTDVIIKNNLK 335 Score = 33.3 bits (75), Expect = 0.062, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 10/65 (15%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVF-------SKDEFPEVYVPTVFENYVA--DIEVDGKQ 52 AA KL+++G G GK+ L E + PT++ N + + VD ++ Sbjct: 9 AAREVKLLLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDARE 68 Query: 53 VELAL 57 +L + Sbjct: 69 -KLHI 72 >4KJZ-A nrPDB Length = 473 Score = 36.7 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 65/171 (38%), Gaps = 20/171 (11%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQEDY 66 +V++G GKT LL K E + ++ A +++ V DT G E + Sbjct: 75 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFI--DTPGHEAF 132 Query: 67 DRLRPLSYPDTDVILMCFSVDS---PDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRS 123 +R D+ ++ + D P + E I K +I NK DL Sbjct: 133 TTIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQ 185 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETA 174 + + + M++ V + G + SAKT +GV+++ E Sbjct: 186 ADPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMI 229 >4B44-A nrPDB Length = 363 Score = 36.7 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 65/171 (38%), Gaps = 20/171 (11%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQEDY 66 +V++G GKT LL K E + ++ A +++ V DT G E + Sbjct: 76 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFI--DTPGHEAF 133 Query: 67 DRLRPLSYPDTDVILMCFSVDS---PDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRS 123 +R D+ ++ + D P + E I K +I NK DL Sbjct: 134 TTIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQ 186 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETA 174 + + + M++ V + G + SAKT +GV+++ E Sbjct: 187 ADPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMI 230 >3H2Y-A nrPDB Length = 368 Score = 36.7 bits (84), Expect = 0.007, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 11/98 (11%) Query: 98 KWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYL 157 W+P + F N ++LV NK DL + + K + + + ++ + + Sbjct: 85 SWLPGLHRFVGNNKVLLVGNKADL-----IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLI 139 Query: 158 ECSAKTKEGVREVFETATRAALQKRYGSQNGCINCCKV 195 SA +G+ E A R G + C V Sbjct: 140 --SAAKGQGIAE----LADAIEYYRGGKDVYVVGCTNV 171 Score = 29.8 bits (66), Expect = 0.85, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 5/59 (8%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELA----LWDTAG 62 + VVG GK+ + K EF + + ++ +D + L L+DT G Sbjct: 163 VYVVGCTNVGKSTFINRMIK-EFSDETENVITTSHFPGTTLDLIDIPLDEESSLYDTPG 220 >1HEY-A nrPDB Length = 128 Score = 36.4 bits (83), Expect = 0.008, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 10/99 (10%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALW--- 58 A K +VVG+G GK+ + + + F V + + ++ G ++ W Sbjct: 1 ADKELKFLVVGNGGTGKSTVRNLLKELGFNNVEDAEDGVDALNKLQAGGYGFVISDWNMP 60 Query: 59 --DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENI 95 D G E +R L V + ENI Sbjct: 61 NMD--GLELLKTIRA---DGAMSALPVLMVTAEAKKENI 94 >3K53-A nrPDB Length = 271 Score = 36.4 bits (83), Expect = 0.008, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 24/169 (14%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 + +VG+ GKT + + P V I + ++ E + D G Sbjct: 6 VALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIM-EYREKEFLVVDLPGIYSLT 64 Query: 68 R------LRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDL 121 + D + ++ VDS + N+ + + N+ ++L NK DL Sbjct: 65 AHSIDELIARNFILDGNADVIVDIVDSTCLMRNLFLT-LELFEMEVKNIILVL--NKFDL 121 Query: 122 RSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREV 170 + + ++ +M++E + +AK EGV E+ Sbjct: 122 LKKKGAKIDIKKMRKEL--------------GVPVIPTNAKKGEGVEEL 156 >3J4J-A nrPDB Length = 569 Score = 36.0 bits (82), Expect = 0.010, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 65/171 (38%), Gaps = 20/171 (11%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQEDY 66 +V++G GKT LL K E + ++ A +++ V DT G E + Sbjct: 76 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFI--DTPGHEAF 133 Query: 67 DRLRPLSYPDTDVILMCFSVDS---PDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRS 123 +R D+ ++ + D P + E I K +I NK DL Sbjct: 134 TTIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQ 186 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETA 174 + + + M++ V + G + SAKT +GV+++ E Sbjct: 187 ADPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMI 230 >6OIK-A nrPDB Length = 354 Score = 36.0 bits (82), Expect = 0.011, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 61/189 (32%), Gaps = 36/189 (19%) Query: 33 VYVPTVFENYVADIEVDG--------KQVELALWDTAGQEDYDRLRPLSYPDTDVILMC- 83 Y PT + ++ G K + L+D GQ + + D I+ C Sbjct: 167 DYQPTEQDILRTRVKTTGIVETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCV 226 Query: 84 ----FS-VDSPDSLENIPEKWVPEVKHFCPN-----VPIILVANKKDLRSDEHVRTELAR 133 + V D N + + C N IIL NKKDL ++ ++ L Sbjct: 227 ALSGYDQVLHEDETTNRMHESLMLFDSICNNKFFIDTSIILFLNKKDLFGEKIKKSPLTI 286 Query: 134 MKQEPVRTDDGRAMAVRIQA-------------YDYLECSAKTKEGVREVFETATRAALQ 180 E + A IQA Y ++ C A ++ VF+ T + Sbjct: 287 CFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCHMTC-ATDTNNIQVVFDAVTDIIIA 345 Query: 181 KRYGSQNGC 189 GC Sbjct: 346 NN---LRGC 351 Score = 29.8 bits (66), Expect = 0.74, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 17/96 (17%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFS-------KDEFPEVYVPTVFENYVADIEVDGKQVE 54 AA KL+++G G GK+ ++ E + Y P V+ N + + V Sbjct: 30 AAKDVKLLLLGAGESGKSTIVKQMKIIHEDGFSGEDVKQYKPVVYSNTIQSLA---AIVR 86 Query: 55 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPD 90 DT G E D+ D ++C V + Sbjct: 87 AM--DTLGIEYGDKE-----RKADAKMVCDVVSRME 115 >2QAG-C nrPDB Length = 418 Score = 35.6 bits (81), Expect = 0.013, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 9/64 (14%) Query: 8 LVVVGDGACGKTCLLIV-FSKDEFPEVY-------VPTVFENYVADIEVDGK-QVELALW 58 L+VVG+ GK+ L+ F D + Y TV + +G Q+ L + Sbjct: 34 LMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLLTIV 93 Query: 59 DTAG 62 DT G Sbjct: 94 DTPG 97 >5KUT-A nrPDB Length = 189 Score = 35.6 bits (81), Expect = 0.014, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 42/143 (29%), Gaps = 32/143 (22%) Query: 10 VVGDGACGKTCLLIVFS-KDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDR 68 VVG GK+ L F + + + ++V+ GQE Y Sbjct: 14 VVGACGVGKSAFLQAFLGRGLGHQDTREQPPGYAIDTVQVN------------GQEKYLI 61 Query: 69 LRPLSYPDTDVIL------------MCFSVDSPDSLENIPEKWVPEVKHFCPN-VPIILV 115 L + TD +L + F P S + + H+ P + V Sbjct: 62 LCEV---GTDGLLATSLDATCDVACLMFDGSDPKSFAHCASVYK---HHYMDGQTPCLFV 115 Query: 116 ANKKDLRSDEHVRTELARMKQEP 138 ++K DL V Sbjct: 116 SSKADLPEGVAVSGPSPAEFCRK 138 >4WQY-BZ nrPDB Length = 758 Score = 35.2 bits (80), Expect = 0.019, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 43/144 (29%), Gaps = 24/144 (16%) Query: 16 CGKTCLLIVFSK-----DEFPEVYVPTVFENYVADIEVDGKQVE------------LALW 58 GKT + EV+ +++ G + + + Sbjct: 90 AGKTTTTERILYYTGRIHKIGEVHEGAATMDFMEQERERGITITAAVTTCFWKDHRINII 149 Query: 59 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANK 118 DT G D+ S D ++ F S W K+ VP I ANK Sbjct: 150 DTPGHVDFTIEVERSMRVLDGAIVVFD-SSQGVEPQSETVWRQAEKY---KVPRIAFANK 205 Query: 119 KDLRSDE---HVRTELARMKQEPV 139 D + +RT R+ PV Sbjct: 206 MDKTGADLWLVIRTMQERLGARPV 229 >4YMS-J nrPDB Length = 240 Score = 35.2 bits (80), Expect = 0.020, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELA 56 +V++G GK+ LL + PT E ++ ++++ +V + Sbjct: 30 VVIIGPSGSGKSTLLR-----CINLLEEPTKGEVFIDGVKINNGKVNIN 73 >3JB9-B nrPDB Length = 984 Score = 34.8 bits (79), Expect = 0.023, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 53/163 (32%), Gaps = 28/163 (17%) Query: 17 GKTCLL------------------IVFSKDEFPE-VYVPTVFENYVADIEVD--GKQVEL 55 GK+ LL + ++ + E V ++ + D GK Sbjct: 153 GKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMSIKSTPLTLAVSDMKGKTFAF 212 Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHF-CPNVPIIL 114 DT G D+ +D +++ V E + +KH ++PI+L Sbjct: 213 QCIDTPGHVDFVDEVAAPMAISDGVVLVVDVI-----EGVMINTTRIIKHAILHDMPIVL 267 Query: 115 VANKKD-LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDY 156 V NK D L + + A K V + + + Y Sbjct: 268 VLNKVDRLILELRLPPNDAYHKLRHVIDEVNDNICQISKDLKY 310 >6OIJ-A nrPDB Length = 353 Score = 34.8 bits (79), Expect = 0.025, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 54/186 (29%), Gaps = 32/186 (17%) Query: 34 YVPTVFENYVADIEVDG--------KQVELALWDTAGQEDYDRLRPLSYPDTDV--ILMC 83 Y+PT + + G + + + D GQ R + + L+ Sbjct: 166 YLPTQQDVLRVRVPTTGIIEYPFDLENIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVA 225 Query: 84 FSVDSPDSLENIPEKWVPEVKHFCPNVP---------IILVANKKDLRSDEHVRTELARM 134 S +E+ E + E K + +IL NKKDL D+ + + L Sbjct: 226 LSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEDKILYSHLVDY 285 Query: 135 KQEPVRTDDGRAMAVRIQAYDYLE-------------CSAKTKEGVREVFETATRAALQK 181 E A +++ A E +R VF LQ Sbjct: 286 FPEFDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQL 345 Query: 182 RYGSQN 187 N Sbjct: 346 NLKEYN 351 >4QJ3-A nrPDB Length = 379 Score = 34.4 bits (78), Expect = 0.029, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 54/189 (28%), Gaps = 32/189 (16%) Query: 31 PEVYVPTVFENYVADIEVDG--------KQVELALWDTAGQEDYDRLRPLSYPDTDV--I 80 Y+PT + + G + V + D GQ R + + Sbjct: 189 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 248 Query: 81 LMCFSVDSPDSLENIPEKWVPEVKHFCPNVP---------IILVANKKDLRSDEHVRTEL 131 L+ S +E+ E + E K + +IL NKKDL ++ + + L Sbjct: 249 LVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHL 308 Query: 132 ARMKQEPVRTDDGRAMAVRIQAYDYLE-------------CSAKTKEGVREVFETATRAA 178 E A +++ A E +R VF Sbjct: 309 VDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTI 368 Query: 179 LQKRYGSQN 187 LQ N Sbjct: 369 LQLNLKEYN 377 >2BCJ-Q nrPDB Length = 353 Score = 34.4 bits (78), Expect = 0.030, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 54/189 (28%), Gaps = 32/189 (16%) Query: 31 PEVYVPTVFENYVADIEVDG--------KQVELALWDTAGQEDYDRLRPLSYPDTDV--I 80 Y+PT + + G + V + D GQ R + + Sbjct: 163 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 222 Query: 81 LMCFSVDSPDSLENIPEKWVPEVKHFCPNVP---------IILVANKKDLRSDEHVRTEL 131 L+ S +E+ E + E K + +IL NKKDL ++ + + L Sbjct: 223 LVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHL 282 Query: 132 ARMKQEPVRTDDGRAMAVRIQAYDYLE-------------CSAKTKEGVREVFETATRAA 178 E A +++ A E +R VF Sbjct: 283 VDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTI 342 Query: 179 LQKRYGSQN 187 LQ N Sbjct: 343 LQLNLKEYN 351 >4V8Y-CP nrPDB Length = 339 Score = 34.4 bits (78), Expect = 0.032, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 64/224 (28%), Gaps = 53/224 (23%) Query: 8 LVVVGDGACGKTCLL--IVFSKDEFPEVYVPT--VFENY--------VADIEVDGKQVEL 55 ++G GKT LL I + + E T + Y + + ++ Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 56 AL-----WDTAGQEDYDRLRPLSYPDT---DVILMCFSVDSPDSLENIPEKWVPEVKHFC 107 + DT G E + LR + ++ ++ + LE + + ++ Sbjct: 68 DVPGLLVIDTPGHESFSNLRS---RGSSLCNIAILVIDI--MHGLEQQTIESIKLLRDR- 121 Query: 108 PNVPIILVANKKDLRSD-------------EHVRTELARMKQEPVRTDDGRAMAVRIQAY 154 P ++ NK D D + Q + + Sbjct: 122 -KAPFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNSE 180 Query: 155 DYLE------------CSAKTKEGVREVFETATRAALQKRYGSQ 186 Y + SA T EGV ++ QKR Q Sbjct: 181 LYFQNKNMSKYVSIVPTSAVTGEGVPDL-LWLLLELTQKRMSKQ 223 >5NON-A nrPDB Length = 165 Score = 34.4 bits (78), Expect = 0.033, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 8/45 (17%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGK 51 KL ++GDG G T L + F EFP Y I VD + Sbjct: 51 KLEIIGDGGVG-TILDMTFVPGEFPHEYK-------EKFILVDNE 87 >2VNE-A nrPDB Length = 201 Score = 34.4 bits (78), Expect = 0.033, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 8/45 (17%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGK 51 KL ++GDG G T L + F EFP Y I VD + Sbjct: 67 KLEIIGDGGVG-TILDMTFVPGEFPHEYK-------EKFILVDNE 103 >4NCF-A nrPDB Length = 457 Score = 34.0 bits (77), Expect = 0.042, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 64/224 (28%), Gaps = 53/224 (23%) Query: 8 LVVVGDGACGKTCLL--IVFSKDEFPEVYVPT--VFENY--------VADIEVDGKQVEL 55 ++G GKT LL I + + E T + Y + + ++ Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 72 Query: 56 AL-----WDTAGQEDYDRLRPLSYPDT---DVILMCFSVDSPDSLENIPEKWVPEVKHFC 107 + DT G E + LR + ++ ++ + LE + + ++ Sbjct: 73 DVPGLLVIDTPGHESFSNLRS---RGSSLCNIAILVIDI--MHGLEQQTIESIKLLRDR- 126 Query: 108 PNVPIILVANKKDLRSD-------------EHVRTELARMKQEPVRTDDGRAMAVRIQAY 154 P ++ NK D D + Q + + Sbjct: 127 -KAPFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNSE 185 Query: 155 DYLE------------CSAKTKEGVREVFETATRAALQKRYGSQ 186 Y + SA T EGV ++ QKR Q Sbjct: 186 LYFQNKNMSKYVSIVPTSAVTGEGVPDL-LWLLLELTQKRMSKQ 228 >4V8Z-CV nrPDB Length = 586 Score = 34.0 bits (77), Expect = 0.044, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 64/224 (28%), Gaps = 53/224 (23%) Query: 8 LVVVGDGACGKTCLL--IVFSKDEFPEVYVPT--VFENY--------VADIEVDGKQVEL 55 ++G GKT LL I + + E T + Y + + ++ Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 56 AL-----WDTAGQEDYDRLRPLSYPDT---DVILMCFSVDSPDSLENIPEKWVPEVKHFC 107 + DT G E + LR + ++ ++ + LE + + ++ Sbjct: 68 DVPGLLVIDTPGHESFSNLRS---RGSSLCNIAILVIDI--MHGLEQQTIESIKLLRDR- 121 Query: 108 PNVPIILVANKKDLRSD-------------EHVRTELARMKQEPVRTDDGRAMAVRIQAY 154 P ++ NK D D + Q + + Sbjct: 122 -KAPFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNSE 180 Query: 155 DYLE------------CSAKTKEGVREVFETATRAALQKRYGSQ 186 Y + SA T EGV ++ QKR Q Sbjct: 181 LYFQNKNMSKYVSIVPTSAVTGEGVPDL-LWLLLELTQKRMSKQ 223 >3WBI-A nrPDB Length = 606 Score = 34.0 bits (77), Expect = 0.045, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 64/224 (28%), Gaps = 53/224 (23%) Query: 8 LVVVGDGACGKTCLL--IVFSKDEFPEVYVPT--VFENY--------VADIEVDGKQVEL 55 ++G GKT LL I + + E T + Y + + ++ Sbjct: 12 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 71 Query: 56 AL-----WDTAGQEDYDRLRPLSYPDT---DVILMCFSVDSPDSLENIPEKWVPEVKHFC 107 + DT G E + LR + ++ ++ + LE + + ++ Sbjct: 72 DVPGLLVIDTPGHESFSNLRS---RGSSLCNIAILVIDI--MHGLEQQTIESIKLLRDR- 125 Query: 108 PNVPIILVANKKDLRSD-------------EHVRTELARMKQEPVRTDDGRAMAVRIQAY 154 P ++ NK D D + Q + + Sbjct: 126 -KAPFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNSE 184 Query: 155 DYLE------------CSAKTKEGVREVFETATRAALQKRYGSQ 186 Y + SA T EGV ++ QKR Q Sbjct: 185 LYFQNKNMSKYVSIVPTSAVTGEGVPDL-LWLLLELTQKRMSKQ 227 >4TN1-B nrPDB Length = 345 Score = 33.7 bits (76), Expect = 0.052, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 27/133 (20%) Query: 8 LVVVGDGACGKTCLL--IVFSKDEFPEVYVPT--VFENY---------VADIEVDGK-QV 53 ++G GKT LL I + + E T + Y A + DGK + Sbjct: 13 CCILGHVRTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 54 E---LALWDTAGQEDYDRLRPLSYPDT---DVILMCFSVDSPDSLENIPEKWVPEVKHFC 107 + L + DT G E + LR + ++ ++ + + I + + Sbjct: 73 KVPGLLIIDTPGHESFSNLRS---RGSSLCNIAILVVDIMHGLEPQTIESLRLLRER--- 126 Query: 108 PNVPIILVANKKD 120 P ++ NK D Sbjct: 127 -KTPFVVALNKID 138 >5IRR-A nrPDB Length = 308 Score = 33.3 bits (75), Expect = 0.062, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 12/21 (57%) Query: 7 KLVVVGDGACGKTCLLIVFSK 27 KL+VVGD GKT L+ Sbjct: 28 KLIVVGDSGLGKTTLIKSLIS 48 >4N3G-A nrPDB Length = 603 Score = 33.3 bits (75), Expect = 0.063, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 27/133 (20%) Query: 8 LVVVGDGACGKTCLL--IVFSKDEFPEVYVPT--VFENY---------VADIEVDGK-QV 53 ++G GKT LL I + + E T + Y A + DGK + Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 54 E---LALWDTAGQEDYDRLRPLSYPDT---DVILMCFSVDSPDSLENIPEKWVPEVKHFC 107 + L + DT G E + LR + ++ ++ + + I + + Sbjct: 73 KVPGLLIIDTPGHESFSNLRS---RGSSLCNIAILVVDIMHGLEPQTIESLRLLRER--- 126 Query: 108 PNVPIILVANKKD 120 P ++ NK D Sbjct: 127 -KTPFVVALNKID 138 >4NCL-A nrPDB Length = 457 Score = 33.3 bits (75), Expect = 0.065, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 27/133 (20%) Query: 8 LVVVGDGACGKTCLL--IVFSKDEFPEVYVPT--VFENY---------VADIEVDGK-QV 53 ++G GKT LL I + + E T + Y A + DGK + Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 54 E---LALWDTAGQEDYDRLRPLSYPDT---DVILMCFSVDSPDSLENIPEKWVPEVKHFC 107 + L + DT G E + LR + ++ ++ + + I + + Sbjct: 73 KVPGLLIIDTPGHESFSNLRS---RGSSLCNIAILVVDIMHGLEPQTIESLRLLRER--- 126 Query: 108 PNVPIILVANKKD 120 P ++ NK D Sbjct: 127 -KTPFVVALNKID 138 >2YYZ-A nrPDB Length = 359 Score = 33.3 bits (75), Expect = 0.071, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 5/43 (11%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDG 50 + ++G CGKT L++ + +Y PT E Y D+ V+ Sbjct: 32 VALLGPSGCGKTTTLLMLAG-----IYKPTSGEIYFDDVLVND 69 >3PR1-A nrPDB Length = 195 Score = 33.3 bits (75), Expect = 0.073, Method: Composition-based stats. Identities = 30/188 (15%), Positives = 65/188 (34%), Gaps = 36/188 (19%) Query: 4 IRKKLVVVGDGACGKTCLLIVFSKDE--FPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 ++ ++ VG GK+ LL + F T + + + + D Sbjct: 22 LKGEVAFVGRSNVGKSSLLNALFNRKIAFVSK---TPGKTRSINFYLVNSKYYF--VDLP 76 Query: 62 G--------QED--YDRLRPLSYPDT----DVILMCFSVDSPDSLENIPEKWVPEVKHFC 107 G +E + RL + + V L+ P + + +W+ + Sbjct: 77 GYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLMMVEWMKSL---- 132 Query: 108 PNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGV 167 N+P +V K D +M + + ++ R + + Y + S+ T EG+ Sbjct: 133 -NIPFTIVLTKMD----------KVKMSERAKKLEEHRKVFSKYGEYTIIPTSSVTGEGI 181 Query: 168 REVFETAT 175 E+ + + Sbjct: 182 SELLDLIS 189 >1G7S-A nrPDB Length = 594 Score = 33.3 bits (75), Expect = 0.073, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 51/150 (34%), Gaps = 33/150 (22%) Query: 29 EFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPD---TDVILMCFS 85 E P + + +++ + L DT G E + LR D+ ++ Sbjct: 46 EIPMDVIEGICGDFLKKFSIRETLPGLFFIDTPGHEAFTTLRK---RGGALADLAILIVD 102 Query: 86 VDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGR 145 ++ + ++ + ++ + P ++ ANK D + R +GR Sbjct: 103 INEG--FKPQTQEALNILRMYR--TPFVVAANKID--------------RIHGWRVHEGR 144 Query: 146 AMAVRIQAYDYLECSAKTKEGVREVFETAT 175 ++E +K V++ +T Sbjct: 145 ---------PFMETFSKQDIQVQQKLDTKV 165 >1IRQ-A nrPDB Length = 71 Score = 32.9 bits (74), Expect = 0.080, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 4/69 (5%) Query: 113 ILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFE 172 ++V N L + + R + ++ + D + + +E AK V+EV + Sbjct: 1 MIVGN---LGAQKAKRNDTPISAKKDIMGDKTVRVRADLHHIIKIET-AKNGGNVKEVMD 56 Query: 173 TATRAALQK 181 A ++K Sbjct: 57 QALEEYIRK 65 >5VAI-A nrPDB Length = 380 Score = 32.9 bits (74), Expect = 0.096, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 19/100 (19%) Query: 42 YVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSL-----ENIP 96 + +VD +V ++D GQ D R + D I+ + S E+ Sbjct: 194 FETKFQVD--KVNFHMFDVGGQRDERRKWIQCFNDVTAIIFV---VASSSYNMVIREDNQ 248 Query: 97 EKWVPEV---------KHFCPNVPIILVANKKDLRSDEHV 127 + E + + +IL NK+DL +++ + Sbjct: 249 TNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVL 288 >6F1T-i nrPDB Length = 492 Score = 32.5 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 2/90 (2%) Query: 86 VDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGR 145 + S EN+ V +P+++V K D S + + +++ R Sbjct: 201 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRR 260 Query: 146 AMAVRIQAYDYLECSAKTKEGVREVFETAT 175 A Y S K ++ + +++ Sbjct: 261 FCLQYGAALIY--TSVKEEKNLDLLYKYIV 288 Score = 27.5 bits (60), Expect = 4.1, Method: Composition-based stats. Identities = 6/18 (33%), Positives = 10/18 (55%) Query: 8 LVVVGDGACGKTCLLIVF 25 ++V G+ GKT L+ Sbjct: 57 ILVFGEDGSGKTTLMTKL 74 >6F1Y-j nrPDB Length = 337 Score = 32.5 bits (73), Expect = 0.13, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 2/90 (2%) Query: 86 VDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGR 145 + S EN+ V +P+++V K D S + + +++ R Sbjct: 165 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRR 224 Query: 146 AMAVRIQAYDYLECSAKTKEGVREVFETAT 175 A Y S K ++ + +++ Sbjct: 225 FCLQYGAALIY--TSVKEEKNLDLLYKYIV 252 Score = 27.1 bits (59), Expect = 4.7, Method: Composition-based stats. Identities = 6/18 (33%), Positives = 10/18 (55%) Query: 8 LVVVGDGACGKTCLLIVF 25 ++V G+ GKT L+ Sbjct: 21 ILVFGEDGSGKTTLMTKL 38 >1ZCB-A nrPDB Length = 362 Score = 32.5 bits (73), Expect = 0.13, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 44/163 (26%), Gaps = 29/163 (17%) Query: 51 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC--- 107 K V + D GQ + + IL F V S + + + E Sbjct: 199 KNVPFKMVDVGGQRSERKRWFECFDSVTSIL--FLVSSSEFDQVLMEDRQTNRLTESLNI 256 Query: 108 ----------PNVPIILVANKKDLRSDEHVRTELARMKQE--------------PVRTDD 143 NV IIL NK DL ++ + E V Sbjct: 257 FETIVNNRVFSNVSIILFLNKTDLLEEKVQVVSIKDYFLEFEGDPHCLRDVQKFLVECFR 316 Query: 144 GRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRYGSQ 186 G+ + + + +A E +R VF L Sbjct: 317 GKRRDQQQRPLYHHFTTAINTENIRLVFRDVKDTILHDNLKQL 359 Score = 32.5 bits (73), Expect = 0.13, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 10/60 (16%) Query: 7 KLVVVGDGACGKTCLLIVF-------SKDEFPEVYVPTVFENYVA--DIEVDGKQVELAL 57 K++++G G GK+ L E + PT++ N + + VD ++ +L + Sbjct: 35 KILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDARE-KLHI 93 >1ZCA-A nrPDB Length = 359 Score = 32.1 bits (72), Expect = 0.15, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 51/158 (32%), Gaps = 24/158 (15%) Query: 51 KQVELALWDTAGQEDYDRLRPLSYPDTDVILMC-----FS---VDSPDSLENIPEKWVPE 102 K++ + D GQ + + IL + ++ + + + E Sbjct: 197 KKIPFKMVDVGGQRSQRQKWFQCFDGITSILFMVSSSEYDQVLMEDRRTNRLVESMNIFE 256 Query: 103 VKHFCP---NVPIILVANKKDLRSDEH----VRTELARMKQEPVRTDDGRAMAVRIQAYD 155 NV IIL NK DL ++ ++ K +P R +D + V+ Sbjct: 257 TIVNNKLFFNVSIILFLNKMDLLVEKVKSVSIKKHFPDFKGDPHRLEDVQRYLVQCFDRK 316 Query: 156 ---------YLECSAKTKEGVREVFETATRAALQKRYG 184 + +A E +R VF LQ+ Sbjct: 317 RRNRSKPLFHHFTTAIDTENIRFVFHAVKDTILQENLK 354 Score = 28.7 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 10/60 (16%) Query: 7 KLVVVGDGACGKTCLLIV---FSKDEFPE----VYVPTVFENYVA--DIEVDGKQVELAL 57 K++++G G GK+ L EF + + T+F+N + + VD + +L + Sbjct: 37 KILLLGAGESGKSTFLKQMRIIHGREFDQKALLEFRDTIFDNILKGSRVLVDARD-KLGI 95 >6HZK-A nrPDB Length = 333 Score = 31.7 bits (71), Expect = 0.18, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 4/35 (11%) Query: 7 KLVVVG---DGACGKTCLLIVFSKDEFPEVYVPTV 38 ++V++G D CGK+ L + D F + + Sbjct: 6 RVVLIGVAGDSGCGKSTFLNRLA-DLFGTELMTVI 39 >4UJC-AB nrPDB Length = 627 Score = 31.7 bits (71), Expect = 0.20, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 71/230 (30%), Gaps = 67/230 (29%) Query: 8 LVVVGDGACGKTCLL--IVFSKDEFPEVYVPT------------VFENYVADIEVDGKQV 53 + V+G GKT +L + + + E T + E D + V Sbjct: 41 ICVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKNFDRENV 100 Query: 54 E---LALWDTAGQEDYDRLRPLSYPDT---DVILMCFSVD---SPDSLENIPEKWVPEVK 104 + + DT G E + LR + D+ ++ + P ++E+I Sbjct: 101 RIPGMLIIDTPGHESFSNLRN---RGSSLCDIAILVVDIMHGLEPQTIESINLL------ 151 Query: 105 HFCPNVPIILVANKKD----------------LRSDEHVRTELARMKQEPVRTDDGRAMA 148 P I+ NK D L+ + + + + + + + Sbjct: 152 -KSKKCPFIVALNKIDRLYDWKKSPDSDVAATLKKQKKNTKDEFEERAKAIIVEFAQQ-- 208 Query: 149 VRIQAYDYLE------------CSAKTKEGVREVFE---TATRAALQKRY 183 + A + E SA T +G+ + T+ L KR Sbjct: 209 -GLNAALFYENKDPRTFVSLVPTSAHTGDGMGSLIYLLVELTQTMLSKRL 257 >5OCH-A nrPDB Length = 612 Score = 31.7 bits (71), Expect = 0.20, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 22/78 (28%), Gaps = 30/78 (38%) Query: 8 LVVVGDGACGKT---CLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 + +VG GKT LL F Y PT + +DG+ Sbjct: 394 VALVGQSGGGKTTVASLLERF--------YDPTAGV-----VMLDGR------------- 427 Query: 65 DYDRLRPLSYPD-TDVIL 81 D L P + Sbjct: 428 DLRTLDPSWLRGQVVGFI 445 >1PUJ-A nrPDB Length = 282 Score = 31.7 bits (71), Expect = 0.20, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 3/56 (5%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 62 + +++G GK+ L+ +K + ++V + L L DT G Sbjct: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKE---LELLDTPG 174 >3V70-A nrPDB Length = 247 Score = 31.7 bits (71), Expect = 0.21, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 55/176 (31%), Gaps = 31/176 (17%) Query: 2 AAIRKKLVVVGDGACGKTCLLIV-FSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDT 60 ++L++VG GK+ + F T + + + DT Sbjct: 18 GESTRRLILVGRTGAGKSATGNSILGQRRFFSRLGATSVTRACTTGSRRWDKCHVEVVDT 77 Query: 61 ------------AGQEDYDRLRPLSY----PDTDVILMCFSVDSPDSLENIPEKWVPEVK 104 G E+ R Y P +L+ ++ V +V+ Sbjct: 78 PDIFSSQVSKTDPGCEE----RGHCYLLSAPGPHALLLV---TQLGRFTAQDQQAVRQVR 130 Query: 105 H-FCPNV---PIILVANKKDLRS---DEHVRTELARMKQEPVRTDDGRAMAVRIQA 153 F +V +I+ K+DL ++V R +E V GR A +A Sbjct: 131 DMFGEDVLKWMVIVFTRKEDLAGGSLHDYVSNTENRALRELVAECGGRVCAFDNRA 186 >4TLD-A nrPDB Length = 253 Score = 31.4 bits (70), Expect = 0.25, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 19/53 (35%) Query: 9 VVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 +V G GKT I F + E P VF + + K WD A Sbjct: 43 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLA 95 >2NQ2-C nrPDB Length = 253 Score = 31.4 bits (70), Expect = 0.25, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 62/201 (30%), Gaps = 44/201 (21%) Query: 8 LVVVGDGACGKTCLL------IVFSKDE--------FPEVYVPTVFENYVADIEVDGKQV 53 L V+G CGK+ LL + + F + + F V DI + G+ Sbjct: 34 LAVLGQNGCGKSTLLDLLLGIHRPIQGKIEVYQSIGFVPQFFSSPFAYSVLDIVLMGRST 93 Query: 54 ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVD--SPDSLENIPEKWVPEV---KHFCP 108 + + + + Y L ++ + ++ + + Sbjct: 94 HIN--------TFAKPKSHDYQVAMQALDYLNLTHLAKREFTSLSGGQRQLILIARAIAS 145 Query: 109 NVPIIL---------VANK-------KDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQ 152 +IL +AN+ DL +++ + V + + + Q Sbjct: 146 ECKLILLDEPTSALDLANQDIVLSLLIDLAQSQNMTVVFTTHQPNQVVAIANKTLLLNKQ 205 Query: 153 AYDYLEC-SAKTKEGVREVFE 172 + + E + T E + +F Sbjct: 206 NFKFGETRNILTSENLTALFH 226 >2IW3-A nrPDB Length = 986 Score = 31.4 bits (70), Expect = 0.27, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD 45 ++ ++ V+G GK+ L+ V + +PT E Y + Sbjct: 697 SLSSRIAVIGPNGAGKSTLINVLTG-----ELLPTSGEVYTHE 734 >5X4B-A nrPDB Length = 162 Score = 31.4 bits (70), Expect = 0.28, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 16/123 (13%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVE--LALWDTAG--- 62 + +VG GK+ + + + V T I + + L DT G Sbjct: 5 VAIVGRPNVGKSTIFNRIAGERISIVED-TPGVT-RDRIYSSAEWLNYDFNLIDTGGIDI 62 Query: 63 -----QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVAN 117 + ++ + DVI+ F V+ + + E+ + + P++L N Sbjct: 63 GDEPFLAQIRQQAEIAMDEADVII--FMVNGREGVTAADEEVAKIL--YRTKKPVVLAVN 118 Query: 118 KKD 120 K D Sbjct: 119 KLD 121 >3S1A-A nrPDB Length = 525 Score = 31.4 bits (70), Expect = 0.28, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 19/53 (35%) Query: 9 VVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 +V G GKT I F + E P VF + + K WD A Sbjct: 43 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLA 95 Score = 26.7 bits (58), Expect = 7.0, Method: Composition-based stats. Identities = 6/21 (28%), Positives = 11/21 (52%) Query: 8 LVVVGDGACGKTCLLIVFSKD 28 ++ G GKT L+ F ++ Sbjct: 284 ILATGATGTGKTLLVSRFVEN 304 >1LNZ-A nrPDB Length = 342 Score = 31.4 bits (70), Expect = 0.30, Method: Composition-based stats. Identities = 40/193 (20%), Positives = 67/193 (34%), Gaps = 37/193 (19%) Query: 4 IRKKLV----VVGDGACGKTCLLIVFS--KDEFPEVYVPTVFENYVADIEVDGKQVELAL 57 + K++ +VG + GK+ LL V S K + + + T+ N DG+ +A Sbjct: 153 LELKVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMA- 211 Query: 58 WD----TAGQEDYDRLRPLSYPD---TDVILMCFSVD---SPDSLEN--IPEKWVPEVKH 105 D G L T VI+ + D ++ + + E Sbjct: 212 -DLPGLIEGAHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNL 270 Query: 106 FCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQ-AYDYLECSAKTK 164 P I+VANK D+ P ++ A ++ Y SA T+ Sbjct: 271 RLTERPQIIVANKMDM----------------PEAAENLEAFKEKLTDDYPVFPISAVTR 314 Query: 165 EGVREVFETATRA 177 EG+RE+ Sbjct: 315 EGLRELLFEVANQ 327 >4AC9-A nrPDB Length = 482 Score = 31.4 bits (70), Expect = 0.30, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 7/62 (11%) Query: 109 NVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVR 168 N+PII+V K D E ++ MK T + ++ + SAKT GV Sbjct: 125 NIPIIVVITKSDNAGTEEIKRTEMIMKSILQSTHN-------LKNSSIIPISAKTGFGVD 177 Query: 169 EV 170 E+ Sbjct: 178 EL 179 >1YE8-A nrPDB Length = 178 Score = 31.0 bits (69), Expect = 0.38, Method: Composition-based stats. Identities = 6/21 (28%), Positives = 12/21 (57%) Query: 7 KLVVVGDGACGKTCLLIVFSK 27 K+++ G+ GKT L+ + Sbjct: 2 KIIITGEPGVGKTTLVKKIVE 22 >4Z54-A nrPDB Length = 287 Score = 30.6 bits (68), Expect = 0.45, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 10/65 (15%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFP--------EVYVP-TVFENYV-ADIEVDGKQVELAL 57 ++VVG GK+ L+ K + E +P TV + IE G +++L + Sbjct: 22 IMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKLTV 81 Query: 58 WDTAG 62 DT G Sbjct: 82 IDTPG 86 >2IYT-A nrPDB Length = 184 Score = 30.6 bits (68), Expect = 0.47, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 26/63 (41%), Gaps = 6/63 (9%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K V+VG GK+ + +K + V G+ + ++ T G++++ Sbjct: 4 KAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRT-----GRSI-ADIFATDGEQEF 57 Query: 67 DRL 69 R+ Sbjct: 58 RRI 60 >4U00-A nrPDB Length = 244 Score = 30.2 bits (67), Expect = 0.52, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 16/51 (31%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTV---FENYVADIEVDGKQVE 54 KLV++G GK+ L+ T+ + ++ VDG V+ Sbjct: 32 KLVIIGPSGSGKSTLIR-------------TINRLEDFQEGEVVVDGLSVK 69 >1M0T-A nrPDB Length = 491 Score = 30.2 bits (67), Expect = 0.53, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 12/87 (13%) Query: 28 DEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVD 87 ++F V F++ + +D K +L + DT QE + + Y ++ Sbjct: 243 EKFGTKSVRLTFDDVNDKLFIDDKTGKLFIRDT-EQE----IAVVYYRTG------YTTT 291 Query: 88 SPDSLENIPEKWVPEVKHFCPNVPIIL 114 S ++ E + K F P +L Sbjct: 292 DYTSEKDW-EARLFLEKSFAIKAPDLL 317 >1SUL-A nrPDB Length = 195 Score = 30.2 bits (67), Expect = 0.58, Method: Composition-based stats. Identities = 15/136 (11%), Positives = 42/136 (30%), Gaps = 39/136 (28%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAG----- 62 + + G GK+ + + + + + ++ D G Sbjct: 26 IALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHF--VDVPGYGFAK 83 Query: 63 -----QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPN-------- 109 +E + R+ + + + L+ + + + +++H N Sbjct: 84 VSKSEREAWGRMIETY------------ITTREELKAVVQ--IVDLRHAPSNDDVQMYEF 129 Query: 110 -----VPIILVANKKD 120 +P+I++A K D Sbjct: 130 LKYYGIPVIVIATKAD 145 >2NQL-A nrPDB Length = 388 Score = 30.2 bits (67), Expect = 0.61, Method: Composition-based stats. Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 55 LALWDTAGQEDYDRLRPL 72 +ALWD AGQE +R L Sbjct: 128 IALWDIAGQEAGKSIRDL 145 >5C78-A nrPDB Length = 564 Score = 30.2 bits (67), Expect = 0.64, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 11/16 (68%) Query: 7 KLVVVGDGACGKTCLL 22 K+ +G+ CGK+ L+ Sbjct: 377 KIAFIGESGCGKSTLV 392 >6O81-S nrPDB Length = 472 Score = 30.2 bits (67), Expect = 0.65, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 34/90 (37%), Gaps = 14/90 (15%) Query: 89 PDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMA 148 P + E++ + ++KH I+++ NK DL + + + ++ T Sbjct: 168 PQTSEHLAAIEIMKLKH------ILILQNKIDLVKESQAKEQYEQILAFVQGTV------ 215 Query: 149 VRIQAYDYLECSAKTKEGVREVFETATRAA 178 + + SA+ K + V E + Sbjct: 216 --AEGAPIIPISAQLKYNIEVVCEYIVKKI 243 >4MKI-B nrPDB Length = 298 Score = 29.8 bits (66), Expect = 0.68, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 5/46 (10%) Query: 10 VVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVEL 55 ++G GK+ L+ + P+ + Y+ I++ K+V L Sbjct: 42 IIGHTGSGKSTLIQQL-----NGLLKPSKGKIYINGIDITDKKVSL 82 >6FEC-S nrPDB Length = 422 Score = 29.8 bits (66), Expect = 0.70, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 34/90 (37%), Gaps = 14/90 (15%) Query: 89 PDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMA 148 P + E++ + ++KH I+++ NK DL + + + ++ T Sbjct: 130 PQTSEHLAAIEIMKLKH------ILILQNKIDLVKESQAKEQYEQILAFVQGTV------ 177 Query: 149 VRIQAYDYLECSAKTKEGVREVFETATRAA 178 + + SA+ K + V E + Sbjct: 178 --AEGAPIIPISAQLKYNIEVVCEYIVKKI 205 >5MKK-A nrPDB Length = 611 Score = 29.8 bits (66), Expect = 0.70, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 11/45 (24%) Query: 7 KLVVVGDGACGKT---CLLIVFSKDEFPEVYVPTVFENYVADIEV 48 K+ +VG GKT L+ F Y P ++ ++V Sbjct: 387 KVALVGATGAGKTSVVSLIARF--------YDPQRGCVFLDGVDV 423 >5IDV-A nrPDB Length = 279 Score = 29.8 bits (66), Expect = 0.70, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 2/34 (5%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFEN 41 + +VG GKT L+ + F EV ++ + Sbjct: 68 VALVGRSGAGKTSLVNMLV--RFQEVSSGQIYLD 99 >6I3O-A nrPDB Length = 677 Score = 29.8 bits (66), Expect = 0.71, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 13/27 (48%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVY 34 L+VVG+ GKT + + + Y Sbjct: 31 LIVVGETGSGKTTQVTQYLAEAGFTKY 57 >1R6B-X nrPDB Length = 758 Score = 29.8 bits (66), Expect = 0.71, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 9 VVVGDGACGKTC----LLIVFSKDEFPE 32 ++VG+ GKT L + + PE Sbjct: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPE 238 >5B3F-A nrPDB Length = 343 Score = 29.8 bits (66), Expect = 0.73, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 1/32 (3%) Query: 10 VVGDGACGKTCLLIVFSKDEFPEVYVPTVFEN 41 V GD GK+ D F E V ++ + Sbjct: 42 VAGDSGSGKSTFT-RAISDIFGEELVSSITVD 72 >2YV5-A nrPDB Length = 302 Score = 29.8 bits (66), Expect = 0.73, Method: Composition-based stats. Identities = 5/22 (22%), Positives = 11/22 (50%) Query: 8 LVVVGDGACGKTCLLIVFSKDE 29 ++ G GK+ +L + +E Sbjct: 168 CILAGPSGVGKSSILSRLTGEE 189 >1QVR-A nrPDB Length = 854 Score = 29.8 bits (66), Expect = 0.76, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 9 VVVGDGACGKTC----LLIVFSKDEFPE 32 V++G+ GKT L K + PE Sbjct: 195 VLIGEPGVGKTAIVEGLAQRIVKGDVPE 222 >4KV9-A nrPDB Length = 412 Score = 29.8 bits (66), Expect = 0.77, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 9/62 (14%) Query: 8 LVVVGDGACGKTCLLIVFSKDEF---PEVYVPTVFENYVADIEVDGKQ----VELALWDT 60 ++ VG+ GK+ LL +F P + T + + + D K+ ++L + +T Sbjct: 44 ILCVGETGIGKSTLLETLFNQKFDFSPSTHDLT--DPKLKAVTYDLKEANVKLKLTVVET 101 Query: 61 AG 62 G Sbjct: 102 CG 103 >5AR1-A nrPDB Length = 303 Score = 29.8 bits (66), Expect = 0.79, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 15/75 (20%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVD------------ 49 I +++VG G++ + + + T+ E+D Sbjct: 24 GGITFTVMIVGQSGSGRSTFINTLCGQQVVDT-STTILLPTDTSTEIDLQLREETVELED 82 Query: 50 --GKQVELALWDTAG 62 G +++L + DT G Sbjct: 83 DEGVKIQLNIIDTPG 97 >4V89-AW nrPDB Length = 534 Score = 29.8 bits (66), Expect = 0.79, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 4/65 (6%) Query: 56 ALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILV 115 L DT G ED+ + D LM +D+ +E+ K + + + PI+ Sbjct: 85 NLLDTPGHEDFSEDTYRTLTAVDCCLMV--IDAAKGVEDRTRKLMEVTRLR--DTPILTF 140 Query: 116 ANKKD 120 NK D Sbjct: 141 MNKLD 145 >2QTH-A nrPDB Length = 364 Score = 29.8 bits (66), Expect = 0.84, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 60/173 (34%), Gaps = 28/173 (16%) Query: 10 VVGDGACGKTCLLIVFSK-DEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED--- 65 +VG GKT L + + + + T I ++ +++ L DT G Sbjct: 184 IVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRYAIPINNRKIML--VDTVGFIRGIP 241 Query: 66 -------YDRLRPLSYPDTDVILMCFSVDSPDSL--ENIPEKWVPEVKHFCPNVPIILVA 116 + L Y +D +++ ++L E + + + PI++ Sbjct: 242 PQIVDAFFVTLSEAKY--SDALILVIDSTFSENLLIETLQSSFEILREIGVSGKPILVTL 299 Query: 117 NKKD-LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVR 168 NK D + D + + +L + + + +D + SA + + Sbjct: 300 NKIDKINGDLYKKLDLVEKLSKELYSP----------IFDVIPISALKRTNLE 342 >2P8Y-T nrPDB Length = 842 Score = 29.8 bits (66), Expect = 0.84, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 35/98 (35%), Gaps = 12/98 (12%) Query: 49 DGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSP---DSLENIPEKWVPEVKH 105 DG + L D+ G D+ + TD L+ + + + +K Sbjct: 94 DGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIK- 152 Query: 106 FCPNVPIILVANKKD--LRSDEHVRTELARMKQEPVRT 141 P++++ NK D L + + +L + V + Sbjct: 153 -----PVVVI-NKVDRALLELQVSKEDLYQTFARTVES 184 >1NI3-A nrPDB Length = 392 Score = 29.8 bits (66), Expect = 0.88, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 30/86 (34%), Gaps = 17/86 (19%) Query: 5 RKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVF--ENYVADIEVDGKQVELALWDTAG 62 K +VG GK+ F + + NY +D ++ ++A+ D Sbjct: 20 NLKTGIVGMPNVGKSTF--------FRAITKSVLGNPANYPY-ATIDPEEAKVAVPD--- 67 Query: 63 QEDYDRLRPLSYPDTD--VILMCFSV 86 E +D L P + L F + Sbjct: 68 -ERFDWLCEAYKPKSRVPAFLTVFDI 92 >5EE0-A nrPDB Length = 395 Score = 29.4 bits (65), Expect = 0.89, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 28/80 (35%), Gaps = 18/80 (22%) Query: 3 AIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVP--TVFENYVADIEVDGKQVE------ 54 + K+ +VG GK+ + +K P P T+ N A + V ++ + Sbjct: 23 SSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPN-EARVYVPDERFDWLCQLY 81 Query: 55 ---------LALWDTAGQED 65 L + D AG Sbjct: 82 KPKSEVSAYLEINDIAGLVR 101 >2OHF-A nrPDB Length = 396 Score = 29.4 bits (65), Expect = 0.89, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 18/77 (23%) Query: 4 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVP--TVFENYVADIEVDGKQVE------- 54 K+ +VG GK+ V + + P T+ N + + V ++ + Sbjct: 21 TSLKIGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPN-ESRVPVPDERFDFLCQYHK 79 Query: 55 --------LALWDTAGQ 63 L + D AG Sbjct: 80 PASKIPAFLNVVDIAGL 96 >2GZA-A nrPDB Length = 361 Score = 29.4 bits (65), Expect = 0.93, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 20/48 (41%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVEL 55 +VV G+ GKT L+ ++ + + T+ + + V L Sbjct: 178 IVVAGETGSGKTTLMKALMQEIPFDQRLITIEDVPELFLPDHPNHVHL 225 >5MRE-WW nrPDB Length = 401 Score = 29.4 bits (65), Expect = 0.96, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 11/19 (57%) Query: 6 KKLVVVGDGACGKTCLLIV 24 KK ++ G+ GKT LL Sbjct: 95 KKFIITGEPGVGKTVLLSQ 113 >6IC4-I nrPDB Length = 233 Score = 29.4 bits (65), Expect = 0.98, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 53/176 (30%), Gaps = 31/176 (17%) Query: 9 VVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDR 68 ++G GKT LL + ++ +DGK D A Sbjct: 31 AIMGPSGTGKTTLL-RLIGGQLVPDQG---------EVLLDGK-------DIAQMSRQRA 73 Query: 69 LRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKD---LRSDE 125 + + + EN+ N+ LVA K + LR E Sbjct: 74 RMGMLFQSGALF------TDMSVYENVAFP--IRAHTLSENLIAELVALKLESVGLRGTE 125 Query: 126 H-VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 180 + TEL+ V RA+A+ Y E A V+ V R+ + Sbjct: 126 QLMPTELSGGMNRRVAL--ARAIALDPDLIMYDEPFAGQDPIVKGVLTRLIRSLRE 179 >5OFO-C nrPDB Length = 871 Score = 29.4 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 12/28 (42%), Gaps = 4/28 (14%) Query: 9 VVVGDGACGKTC----LLIVFSKDEFPE 32 V++G+ GKT L E PE Sbjct: 207 VLIGEPGVGKTAIVEGLAQRIINGEVPE 234 >4RI0-A nrPDB Length = 332 Score = 29.4 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 8/70 (11%) Query: 105 HFCPNVPIILVANKKDLRSDEHVRTELARMK-QEPVRT-------DDGRAMAVRIQAYDY 156 H +P++L+ + DLR E V + Q V T +GR + +R DY Sbjct: 105 HPKKKLPVLLLGHSADLRPGEFVVAIGSPFALQNTVTTGIVSTAQREGRELGLRDSDMDY 164 Query: 157 LECSAKTKEG 166 ++ A G Sbjct: 165 IQTDAIINYG 174 >4HSE-A nrPDB Length = 397 Score = 29.4 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 9 VVVGDGACGKTC----LLIVFSKDEFPE 32 V++G+ GKT L K + PE Sbjct: 58 VLIGEPGVGKTAIVEGLAQRIVKGDVPE 85 >4MYH-A nrPDB Length = 598 Score = 29.4 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 16/51 (31%) Query: 7 KLVVVGDGACGKTC---LLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVE 54 K +VG GK+ L+ F Y P I ++G+ ++ Sbjct: 367 KTAIVGSSGSGKSTILKLVFRF--------YDPESG-----RILINGRDIK 404 >4CIU-A nrPDB Length = 727 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 12/28 (42%), Gaps = 4/28 (14%) Query: 9 VVVGDGACGKTC----LLIVFSKDEFPE 32 V++G+ GKT L E PE Sbjct: 61 VLIGEPGVGKTAIVEGLAQRIINGEVPE 88 >1WXQ-A nrPDB Length = 397 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 6/61 (9%) Query: 102 EVKHFCPNVPIILVANKKDLRSDEH----VRTELARMKQEPVRTDDGRAMAVRIQAYDYL 157 E++ N P+++ ANK D SDE VR E R + + ++ Sbjct: 209 EIRRV--NKPMVIAANKADAASDEQIKRLVREEEKRGYIVIPTSAAAELTLRKAAKAGFI 266 Query: 158 E 158 E Sbjct: 267 E 267 >1U0L-A nrPDB Length = 301 Score = 29.0 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 41/95 (43%), Gaps = 15/95 (15%) Query: 76 DTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMK 135 + D +++ +V P++ I +K++ + +++ NK DL ++ +R R Sbjct: 84 NVDQVILVVTVKMPETSTYIIDKFLVLAEKNELETVMVI--NKMDLYDEDDLRK--VREL 139 Query: 136 QEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREV 170 +E Y ++ SAKT G+ E+ Sbjct: 140 EEIYS-----------GLYPIVKTSAKTGMGIEEL 163 >3LLM-A nrPDB Length = 235 Score = 29.0 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 14/26 (53%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEV 33 +++ G CGKT + F D+F + Sbjct: 79 VIIRGATGCGKTTQVPQFILDDFIQN 104 >4KXX-A nrPDB Length = 637 Score = 29.0 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 21/74 (28%), Gaps = 3/74 (4%) Query: 120 DLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTK---EGVREVFETATR 176 DL V T + V T+ +A + ++ S E F+ Sbjct: 433 DLAMFRSVPTSTVFYPSDGVATEKAVELAANTKGICFIRTSRPENAIIYNNNEDFQVGQA 492 Query: 177 AALQKRYGSQNGCI 190 + K Q I Sbjct: 493 KVVLKSKDDQVTVI 506 >6ED3-A nrPDB Length = 848 Score = 29.0 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 5/37 (13%) Query: 9 VVVGDGACGKTC----LLIVFSKDEFPEVY-VPTVFE 40 V++G+ GKT L + PE T+ Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVA 239 >5JSZ-B nrPDB Length = 287 Score = 29.0 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 10/47 (21%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVE 54 + +VG GK+ L+ F + PT IE+ G + Sbjct: 36 IALVGHTGSGKSTLMQ-----HFNALLKPTSG-----KIEIAGYTIT 72 >5D4W-A nrPDB Length = 926 Score = 29.0 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 5/14 (35%), Positives = 10/14 (71%) Query: 9 VVVGDGACGKTCLL 22 V++G+ GKT ++ Sbjct: 220 VLIGEPGVGKTTIV 233 >1JBK-A nrPDB Length = 195 Score = 29.0 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 12/28 (42%), Gaps = 4/28 (14%) Query: 9 VVVGDGACGKTC----LLIVFSKDEFPE 32 V++G+ GKT L E PE Sbjct: 47 VLIGEPGVGKTAIVEGLAQRIINGEVPE 74 >2BDT-A nrPDB Length = 189 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 55/168 (32%), Gaps = 16/168 (9%) Query: 9 VVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDR 68 ++ G GK+ + Y + + + + V G + ++ Sbjct: 6 IITGPAGVGKSTTCKRLAAQLDNSAY---IEGDIINHMVVGGYRPP------WESDELLA 56 Query: 69 LRPLSYPD-TDVILMC--FSVDSPDSLENIPEKWVPEVKHFCPNVP---IILVANKKDLR 122 L + D T L+ V + + E V+ +V IIL N+++L Sbjct: 57 LTWKNITDLTVNFLLAQNDVVLDYIAFPDEAEALAQTVQAKVDDVEIRFIILWTNREELL 116 Query: 123 SDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREV 170 + +R + +M + + + + I + S + ++ Sbjct: 117 RRDALRKKDEQMGERCLELVE-EFESKGIDERYFYNTSHLQPTNLNDI 163 >3N5F-A nrPDB Length = 408 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 8/61 (13%), Positives = 19/61 (31%), Gaps = 10/61 (16%) Query: 60 TAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKK 119 TA + L + + + E+ + + P+ ++LV + Sbjct: 31 TAEERRAKDLVASYMREAGLFV----------YEDAAGNLIGRKEGTNPDATVVLVGSHL 80 Query: 120 D 120 D Sbjct: 81 D 81 >6H7G-A nrPDB Length = 346 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 13/26 (50%), Gaps = 3/26 (11%) Query: 5 RKKLVVVG---DGACGKTCLLIVFSK 27 + K VV+G D CGK+ + + Sbjct: 4 KDKTVVIGLAADSGCGKSTFMRRMTS 29 >4RY2-A nrPDB Length = 730 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 10/47 (21%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVE 54 + +VG+ GKT L + Y P + I ++G ++ Sbjct: 518 VAIVGESGSGKTTLAKLLMN-----FYSPEKGD-----ILINGHSIK 554 >5VHD-D nrPDB Length = 870 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 13/24 (54%) Query: 9 VVVGDGACGKTCLLIVFSKDEFPE 32 V+ G+ CGKT + F D + E Sbjct: 80 VISGETGCGKTTQVTQFILDNYIE 103 >6D00-1 nrPDB Length = 883 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 11/29 (37%), Gaps = 4/29 (13%) Query: 9 VVVGDGACGKTC----LLIVFSKDEFPEV 33 +VG+ GKT L K + P Sbjct: 203 CLVGEPGVGKTAIAEGLANRIVKGDIPSS 231 >4N1A-A nrPDB Length = 589 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 5/42 (11%) Query: 9 VVVGDGACGKTCLLIVFSKDEFPEVYVPT----VFENYVADI 46 +V GD CGK+ LL E Y P +F +Y + Sbjct: 387 LVFGDTECGKSNLL-RLITAGIIERYTPQQARLIFIDYSRSL 427 >3J3U-A nrPDB Length = 810 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 9 VVVGDGACGKTC----LLIVFSKDEFPE 32 V++G+ GKT L +E PE Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNEVPE 232 >3PXG-A nrPDB Length = 468 Score = 28.7 bits (63), Expect = 1.5, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 9 VVVGDGACGKTC----LLIVFSKDEFPE 32 V++G+ GKT L +E PE Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNEVPE 232 >4YPL-A nrPDB Length = 555 Score = 28.7 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 9/14 (64%) Query: 8 LVVVGDGACGKTCL 21 LV+VG GKT L Sbjct: 113 LVLVGPPGVGKTSL 126 >3PXI-A nrPDB Length = 758 Score = 28.7 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 9 VVVGDGACGKTC----LLIVFSKDEFPE 32 V++G+ GKT L +E PE Sbjct: 205 VLIGEPGVGKTAIAEGLAQQIINNEVPE 232 >2RGK-A nrPDB Length = 421 Score = 28.7 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 17/56 (30%), Gaps = 10/56 (17%) Query: 55 LALWDTA--GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCP 108 L WD A E+Y + + L+ + V +KW+ Sbjct: 155 LESWDEAFSKTEEYRG-GNANMHAVEAFLIVYDVT-------HDKKWLDRAIRVAS 202 >6G2G-A nrPDB Length = 310 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 3/29 (10%) Query: 1 MAAIRKK---LVVVGDGACGKTCLLIVFS 26 M+ + K LV+ G G GK+ + + Sbjct: 1 MSLSQVKHIILVLSGKGGVGKSSVTTQLA 29 >4YPN-A nrPDB Length = 293 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 9/14 (64%) Query: 8 LVVVGDGACGKTCL 21 LV+VG GKT L Sbjct: 146 LVLVGPPGVGKTSL 159 >3B5X-A nrPDB Length = 582 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 5/20 (25%), Positives = 12/20 (60%) Query: 8 LVVVGDGACGKTCLLIVFSK 27 + +VG GK+ + +F++ Sbjct: 372 VALVGRSGSGKSTIANLFTR 391 >3FVQ-A nrPDB Length = 359 Score = 28.7 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 11/19 (57%) Query: 8 LVVVGDGACGKTCLLIVFS 26 L ++G CGKT LL + Sbjct: 33 LFIIGASGCGKTTLLRCLA 51 >3GD7-A nrPDB Length = 390 Score = 28.7 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 16/62 (25%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 ++ ++G GK+ LL F + N +I++DG WD+ E + Sbjct: 49 RVGLLGRTGSGKSTLLSAFLR-----------LLNTEGEIQIDGVS-----WDSITLEQW 92 Query: 67 DR 68 + Sbjct: 93 RK 94 >1HXH-A nrPDB Length = 253 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 6/77 (7%) Query: 121 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVR-EVFETATRAAL 179 L + + E A++ + G+ +A + E S + V E T AA+ Sbjct: 20 LEVVKLLLGEGAKVAFSDINEAAGQQLAAELG-----ERSMFVRHDVSSEADWTLVMAAV 74 Query: 180 QKRYGSQNGCINCCKVL 196 Q+R G+ N +N +L Sbjct: 75 QRRLGTLNVLVNNAGIL 91 >2P65-A nrPDB Length = 187 Score = 28.3 bits (62), Expect = 2.0, Method: Composition-based stats. Identities = 5/14 (35%), Positives = 10/14 (71%) Query: 9 VVVGDGACGKTCLL 22 +++GD GKT ++ Sbjct: 47 ILLGDPGVGKTAIV 60 >6G12-A nrPDB Length = 301 Score = 28.3 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 3/56 (5%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 62 + ++VG GK+ L+ +K + I+V L L DT G Sbjct: 129 RAMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNA---LQLLDTPG 181 >4O0M-A nrPDB Length = 524 Score = 28.3 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 13/37 (35%) Query: 9 VVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD 45 +V G GKT + F + P +F + Sbjct: 44 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTFEES 80 >5GM6-Y nrPDB Length = 876 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 17/40 (42%), Gaps = 1/40 (2%) Query: 8 LVVVGDGACGKTCLLIVF-SKDEFPEVYVPTVFENYVADI 46 L+++G+ GKT L + +D F + + + Sbjct: 242 LIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRV 281 >5M04-A nrPDB Length = 360 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 15/74 (20%) Query: 100 VPEVKHFCPNV---PIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDY 156 + E++ + ++ P LV NK DL D+ E A+ E + +D Y Sbjct: 283 ISELEKYSQDLATKPRWLVFNKIDLL-DKVEAEEKAKAIAEALGWED-----------KY 330 Query: 157 LECSAKTKEGVREV 170 SA + GV+++ Sbjct: 331 YLISAASGLGVKDL 344 >4QIW-C nrPDB Length = 391 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 9/54 (16%) Query: 12 GDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDG----KQVELALWDTA 61 G GKT + E E + T N+ ++V G + +W+ A Sbjct: 225 GLSGVGKT-----IIRKEGDEYVIYTEGSNFKQVLKVPGVDPTRTRTNNIWEIA 273 >6C2V-A nrPDB Length = 115 Score = 28.3 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Query: 8 LVVVGDGACGKTCL--LIVFSKDEFPEVYVPTV 38 +V+VG GKT L L +K+E P+ + TV Sbjct: 5 VVIVGPSGAGKTTLDELARKAKEEVPDAEIRTV 37 Score = 26.7 bits (58), Expect = 6.7, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%), Gaps = 1/39 (2%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADI 46 +V+VG GK+ L + K T+ ++ Sbjct: 58 VVIVGPSGSGKSTLAKI-VKKIIARAGAKTIEVTTEEEL 95 >5AJ2-A nrPDB Length = 355 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 6/27 (22%), Positives = 14/27 (51%) Query: 1 MAAIRKKLVVVGDGACGKTCLLIVFSK 27 + A++ ++ G+ GK+ LL + Sbjct: 158 LEALKSPCLIEGESGKGKSTLLQRIAM 184 >4MRS-A nrPDB Length = 614 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 16/50 (32%) Query: 7 KLVVVGDGACGKTC---LLIVFSKDEFPEVYVPTVFENYVADIEVDGKQV 53 ++ +VG GK+ LL F Y P + I +DG+ + Sbjct: 389 RVAIVGPSGAGKSTIARLLFRF--------YDP-----WEGRILIDGQDI 425 >6QUZ-B nrPDB Length = 599 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 49/145 (33%), Gaps = 41/145 (28%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66 K+ +VG GKT ++ + F ++ I VDG + Sbjct: 383 KVALVGPTGSGKTTIVNLLM--RF--------YDVDRGQILVDGIDI------------- 419 Query: 67 DRLRPLSYPDTDVILM----CFSVDSPDSLE----NIPEKWVPE----------VKHFCP 108 +++ S + I++ FS ++L+ ++ + E +KH Sbjct: 420 RKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPE 479 Query: 109 NVPIILVANKKDLRSDEHVRTELAR 133 +L N +DL + + R Sbjct: 480 GYETVLTDNGEDLSQGQRQLLAITR 504 >2PJZ-A nrPDB Length = 263 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 11/16 (68%) Query: 7 KLVVVGDGACGKTCLL 22 K++++G GKT LL Sbjct: 32 KVIILGPNGSGKTTLL 47 >5ZLU-EE nrPDB Length = 497 Score = 27.9 bits (61), Expect = 2.6, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 12/19 (63%) Query: 7 KLVVVGDGACGKTCLLIVF 25 ++ +VGD GK+ LL V Sbjct: 32 RIGLVGDNGAGKSSLLKVL 50 Score = 27.9 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 14/40 (35%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD 45 K+ + G GKT LL + S+ P Y Sbjct: 323 AKVAITGSNGTGKTSLLKMISERADGLTISPKAEIGYFTQ 362 >1IHU-A nrPDB Length = 589 Score = 27.9 bits (61), Expect = 2.6, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 24/54 (44%), Gaps = 5/54 (9%) Query: 8 LVVVGDGACGKTC----LLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELAL 57 ++++G G GKT + + + F +V++ T + ++G L + Sbjct: 330 IMLMGKGGVGKTTMAAAIAVRLADMGF-DVHLTTSDPAAHLSMTLNGSLNNLQV 382 >3PV0-A nrPDB Length = 381 Score = 27.9 bits (61), Expect = 2.6, Method: Composition-based stats. Identities = 8/15 (53%), Positives = 10/15 (66%) Query: 8 LVVVGDGACGKTCLL 22 +V VG CGK+ LL Sbjct: 32 VVFVGPSGCGKSTLL 46 >5ZME-A nrPDB Length = 687 Score = 27.9 bits (61), Expect = 2.6, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 12/18 (66%), Gaps = 1/18 (5%) Query: 5 RKKLVVV-GDGACGKTCL 21 ++K +++ G G GKT L Sbjct: 11 QRKYIMISGKGGVGKTSL 28 >6HA8-V nrPDB Length = 548 Score = 27.9 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 12/23 (52%) Query: 7 KLVVVGDGACGKTCLLIVFSKDE 29 K+ ++G GKT LL + E Sbjct: 325 KVAIIGPNGSGKTTLLNIILGQE 347 >5JWO-A nrPDB Length = 247 Score = 27.9 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 13/37 (35%) Query: 9 VVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD 45 +V G GKT + F + P +F + Sbjct: 36 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTFEES 72 >2WIC-A nrPDB Length = 267 Score = 27.9 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 13/137 (9%) Query: 10 VVGDGACGKTCLLIVFSKDE--------FPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 ++G+ GKT L + +F + + +L + Sbjct: 8 LIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGIFATTDHQVTLVDLPGTYSLTTIS 67 Query: 62 GQEDYD-RLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKD 120 Q D ++ D ++ VD+ N+ ++ +P ++ N D Sbjct: 68 SQTSLDEQIACHYILSGDADMLINVVDAS----NLERNLYLTLQLLELGIPCVVALNMLD 123 Query: 121 LRSDEHVRTELARMKQE 137 + + VR ++ + Sbjct: 124 IAEKQQVRIDIDALAAR 140 >4CSU-9 nrPDB Length = 390 Score = 27.9 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 15/74 (20%) Query: 100 VPEVKHFCPNV---PIILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDY 156 + E++ + ++ P LV NK DL D+ E A+ E + +D Y Sbjct: 263 ISELEKYSQDLATKPRWLVFNKIDLL-DKVEAEEKAKAIAEALGWED-----------KY 310 Query: 157 LECSAKTKEGVREV 170 SA + GV+++ Sbjct: 311 YLISAASGLGVKDL 324 >2ZBL-A nrPDB Length = 421 Score = 27.9 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 11/74 (14%) Query: 37 TVFENYVADIEVDGKQVELALWDTA-GQ-EDYDRLRPLSYPDTDVILMCFSVDSPDSLEN 94 T+ + +Q+ L WD A Q EDY + + L+ + V Sbjct: 138 TIEV-IEKYFWSEEEQMCLESWDEAFSQTEDYRG-GNANMHAVEAFLIVYDVT------- 188 Query: 95 IPEKWVPEVKHFCP 108 +KW+ Sbjct: 189 HDKKWLDRALRIAS 202 >1YR7-A nrPDB Length = 262 Score = 27.9 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 44/242 (18%), Positives = 71/242 (29%), Gaps = 90/242 (37%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEV-----------------YVPTV---FENYVADIE 47 +V VG GKT L F + E Y P++ V +I Sbjct: 17 VVFVGTAGSGKTTLTGEF--GRYLEDNYKVAYVNLDTGVKELPYEPSIDVREFVTVEEIM 74 Query: 48 VDG-----------------------KQVELA------LWDTAGQ-EDY-------DRLR 70 +G K + L L DT GQ E + + Sbjct: 75 REGYGPNGAIVESYDRLMEKFNEYLNKILRLEKENDYVLIDTPGQMETFLFHEFGVRLME 134 Query: 71 PLSYPDTDVILMCFSVDSPDSLENIPE-------KWVPEVKHFCPNVPIILVANKKDLRS 123 L YP L+ + + P+ L+ + + +++ +P + NK DL S Sbjct: 135 NLPYP-----LVVY-ISDPEILKKPNDYCFVRFFALLIDLRLGATTIPAL---NKVDLLS 185 Query: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLEC---------------SAKTKEGVR 168 +E + T + Y C SAKT+EG Sbjct: 186 EEEKERHRKYFEDIDYLTARLKLDPSMQGLMAYKMCSMMTEVLPPVRVLYLSAKTREGFE 245 Query: 169 EV 170 ++ Sbjct: 246 DL 247 >2GHI-A nrPDB Length = 260 Score = 27.9 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 21/190 (11%), Positives = 50/190 (26%), Gaps = 48/190 (25%) Query: 8 LVVVGDGACGKTC---LLIVFSK------------DEFPEVYVPTVFENYVADIEVDGKQ 52 +VG GK+ LL F +++ + ++ D + + Sbjct: 49 CALVGHTGSGKSTIAKLLYRFYDAEGDIKIGGKNVNKYNRNSIRSIIGIVPQDTILFNET 108 Query: 53 VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPI 112 ++ + Y +L + ++ + + P Sbjct: 109 IKYNIL-------YGKL---------------DATDEEVIKATKSAQLYDFIEALPKKWD 146 Query: 113 ILVANKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFE 172 +V NK + E R R + + + E ++ +F+ Sbjct: 147 TIVGNK-----------GMKLSGGERQRIAIARCLLKDPKIVIFDEATSSLDSKTEYLFQ 195 Query: 173 TATRAALQKR 182 A + R Sbjct: 196 KAVEDLRKNR 205 >2IT1-A nrPDB Length = 362 Score = 27.9 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 17/47 (36%), Gaps = 10/47 (21%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVE 54 + ++G GK+ LL +Y PT I D K V Sbjct: 32 MALLGPSGSGKSTLLY-----TIAGIYKPTSG-----KIYFDEKDVT 68 >3DEF-A nrPDB Length = 262 Score = 27.9 bits (61), Expect = 3.0, Method: Composition-based stats. Identities = 5/22 (22%), Positives = 12/22 (54%) Query: 8 LVVVGDGACGKTCLLIVFSKDE 29 ++V+G G GK+ + ++ Sbjct: 39 VLVLGKGGVGKSSTVNSLIGEQ 60 >6EM8-A nrPDB Length = 818 Score = 27.9 bits (61), Expect = 3.0, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 13/29 (44%), Gaps = 4/29 (13%) Query: 9 VVVGDGACGKTC----LLIVFSKDEFPEV 33 V++G+ GKT L +E PE Sbjct: 205 VLIGEPGVGKTAIAEGLAQAIVNNEVPET 233 >1JAL-A nrPDB Length = 363 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 10/22 (45%) Query: 6 KKLVVVGDGACGKTCLLIVFSK 27 K +VG GK+ L +K Sbjct: 3 FKCGIVGLPNVGKSTLFNALTK 24 >4A9A-A nrPDB Length = 376 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 9/56 (16%) Query: 11 VGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDG----KQVELALWDTAG 62 VG + GK+ LL + E + + V G K ++ + D G Sbjct: 78 VGFPSVGKSTLLSKLTGTE-----SEAAEYEFTTLVTVPGVIRYKGAKIQMLDLPG 128 >5LJA-A nrPDB Length = 231 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 5/18 (27%), Positives = 10/18 (55%) Query: 8 LVVVGDGACGKTCLLIVF 25 + +VG GK+ L+ + Sbjct: 37 VAIVGASGSGKSTLMNIL 54 >5NIK-J nrPDB Length = 654 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 5/18 (27%), Positives = 10/18 (55%) Query: 8 LVVVGDGACGKTCLLIVF 25 + +VG GK+ L+ + Sbjct: 37 VAIVGASGSGKSTLMNIL 54 >5B57-C nrPDB Length = 273 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 19/45 (42%), Gaps = 2/45 (4%) Query: 9 VVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQV 53 ++G GK+ LL F+ E P D+ ++G+ + Sbjct: 31 ALLGRNGAGKSTLLKTFA-GELTGSVAP-HGVRVTGDVTLNGEPL 73 >2PCL-A nrPDB Length = 224 Score = 27.5 bits (60), Expect = 3.4, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 5/42 (11%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVD 49 + ++G GK+ LL + + PT + ++ EVD Sbjct: 33 VSIIGASGSGKSTLLYILGLLD-----APTEGKVFLEGKEVD 69 >4Q7L-A nrPDB Length = 256 Score = 27.5 bits (60), Expect = 3.4, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 12/22 (54%), Gaps = 3/22 (13%) Query: 7 KLVVVGDGACGKTC---LLIVF 25 K+ +VG GKT LL+ F Sbjct: 33 KVALVGPTGSGKTTIVNLLMRF 54 >2P5T-B nrPDB Length = 253 Score = 27.5 bits (60), Expect = 3.4, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 23/126 (18%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 +++ G GKT + + EF V +++ + L L Q++Y Sbjct: 35 ILLGGQSGAGKTTI-HRIKQKEFQGNIVIIDGDSFRSQ-----HPHYLEL-----QQEYG 83 Query: 68 RLRPLSYPDTDVILMCFSVDSPDSL------------ENIPEKWVPEVKHFCPNVPIILV 115 + D ++ V SL ++P+K +K+ V + L+ Sbjct: 84 KDSVEYTKDFAGKMVESLVTKLSSLGYNLLIEGTLRTVDVPKKTAQLLKNKGYEVQLALI 143 Query: 116 ANKKDL 121 A K +L Sbjct: 144 ATKPEL 149 >6EMW-E nrPDB Length = 181 Score = 27.5 bits (60), Expect = 3.4, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 13/29 (44%), Gaps = 4/29 (13%) Query: 9 VVVGDGACGKTC----LLIVFSKDEFPEV 33 V++G+ GKT L +E PE Sbjct: 44 VLIGEPGVGKTAIAEGLAQAIVNNEVPET 72 >5LKM-A nrPDB Length = 452 Score = 27.5 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 7/20 (35%), Positives = 12/20 (60%) Query: 8 LVVVGDGACGKTCLLIVFSK 27 +++ GD GK+ LL+ S Sbjct: 91 VLIGGDPGIGKSTLLLQVST 110 >3VX4-A nrPDB Length = 273 Score = 27.5 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 9/16 (56%) Query: 7 KLVVVGDGACGKTCLL 22 K+ +VG GKT L Sbjct: 63 KVSLVGASGSGKTTLA 78 >2WJG-A nrPDB Length = 188 Score = 27.5 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 24/188 (12%), Positives = 62/188 (32%), Gaps = 27/188 (14%) Query: 5 RKKLVVVGDGACGKTCLLIVFS-KDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 ++ ++G+ GK+ + + ++ + + E + E +G+ + + D G Sbjct: 7 SYEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGE--KFKVVDLPGV 64 Query: 64 EDYDR------LRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVAN 117 + + L+ VD+ + ++ ++L N Sbjct: 65 YSLTANSIDEIIARDYIINEKPDLVVNIVDATA----LERNLYLTLQLMEMGANLLLALN 120 Query: 118 KKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRA 177 K DL + ++ ++ +I + SA K G+ E+ + + A Sbjct: 121 KMDLAKSLGIEIDVDKL--------------EKILGVKVVPLSAAKKMGIEELKKAISIA 166 Query: 178 ALQKRYGS 185 K+ Sbjct: 167 VKDKKTAE 174 >2GA8-A nrPDB Length = 359 Score = 27.5 bits (60), Expect = 4.1, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 2/44 (4%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGK 51 +++VG GK+ + + E Y T + IEV+ + Sbjct: 27 VILVGSPGSGKSTIAEELCQ-IINEKY-HTFLSEHPNVIEVNDR 68 >6FOC-D nrPDB Length = 475 Score = 27.5 bits (60), Expect = 4.1, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 18/70 (25%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALW-------- 58 K+ + G GKT +LI + + T V + +G LW Sbjct: 155 KIALFGGAGVGKT-VLIQEMINRIARNFGGTSVFAGVGERTREGN----DLWVELADANV 209 Query: 59 --DTA---GQ 63 DTA GQ Sbjct: 210 LKDTALVFGQ 219 >6FA9-A nrPDB Length = 655 Score = 27.5 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 11/19 (57%) Query: 8 LVVVGDGACGKTCLLIVFS 26 L++VG+ GKT + + Sbjct: 50 LILVGETGSGKTTQIPQYL 68 >1IM2-A nrPDB Length = 444 Score = 27.5 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 5/20 (25%), Positives = 11/20 (55%) Query: 8 LVVVGDGACGKTCLLIVFSK 27 ++++G GKT + +K Sbjct: 53 ILMIGPTGVGKTEIARRLAK 72 >2OCP-A nrPDB Length = 241 Score = 27.5 bits (60), Expect = 4.4, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Query: 6 KKLVVVGDGACGKTCLLIVFSKDEFPEVYVPT 37 ++L + G+ A GK+ + +PE +V T Sbjct: 3 RRLSIEGNIAVGKSTFV-KLLTKTYPEWHVAT 33 >1E94-E nrPDB Length = 449 Score = 27.5 bits (60), Expect = 4.4, Method: Composition-based stats. Identities = 5/20 (25%), Positives = 11/20 (55%) Query: 8 LVVVGDGACGKTCLLIVFSK 27 ++++G GKT + +K Sbjct: 59 ILMIGPTGVGKTEIARRLAK 78 >5GKO-A nrPDB Length = 671 Score = 27.1 bits (59), Expect = 4.4, Method: Composition-based stats. Identities = 5/18 (27%), Positives = 10/18 (55%) Query: 8 LVVVGDGACGKTCLLIVF 25 + +VG GK+ L+ + Sbjct: 46 VAIVGQSGSGKSTLMNIL 63 >4HZI-A nrPDB Length = 294 Score = 27.1 bits (59), Expect = 4.4, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 25/57 (43%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 64 V++G GK+ L+ + + +F+ +I + + + + D++ QE Sbjct: 63 CVLLGRNGAGKSTLVNLIYGMIWATSGTIRLFQETYGEIAIQDLRKRIGILDSSQQE 119 >2QU8-A nrPDB Length = 228 Score = 27.1 bits (59), Expect = 4.4, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 70/195 (35%), Gaps = 23/195 (11%) Query: 8 LVVVGDGACGKTCLLIVFSK-DEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED- 65 +++ G GK+ + + S+ + + Y T YV D K + + DT G D Sbjct: 32 IILSGAPNVGKSSFMNIVSRANVDVQSYSFTTKNLYVGHF--DHKLNKYQIIDTPGLLDR 89 Query: 66 -YDRLRPLSYPDTDVI-----LMCFSVDSPDSLENIPEKWVPE---VKHFCPNVPIILVA 116 ++ + + ++ F +D + ++ + +K N I++ Sbjct: 90 AFENRNTIEMTTITALAHINGVILFIIDISEQCGLTIKEQINLFYSIKSVFSNKSIVIGF 149 Query: 117 NKKDLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATR 176 NK D + + + + + + + + + S T GV + TA Sbjct: 150 NKIDKCNMDSLSIDNKLLIK--------QILDNVKNPIKFSSFSTLTGVGVEQAKITACE 201 Query: 177 AALQKRYGSQNGCIN 191 L K +++ ++ Sbjct: 202 --LLKNDQAESILLD 214 >1OFI-A nrPDB Length = 310 Score = 27.1 bits (59), Expect = 4.5, Method: Composition-based stats. Identities = 5/20 (25%), Positives = 11/20 (55%) Query: 8 LVVVGDGACGKTCLLIVFSK 27 ++++G GKT + +K Sbjct: 53 ILMIGPTGVGKTEIARRLAK 72 >2XTZ-A nrPDB Length = 354 Score = 27.1 bits (59), Expect = 4.5, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 7/50 (14%) Query: 6 KKLVVVGDGACGKTCLLIV---FSKDEFPE----VYVPTVFENYVADIEV 48 +KL+++G G GK+ + + F E YVP + N I++ Sbjct: 10 RKLLLLGAGESGKSTIFKQIKLLFQTGFDEGELKSYVPVIHANVYQTIKL 59 >1H65-A nrPDB Length = 270 Score = 27.1 bits (59), Expect = 4.7, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 18/56 (32%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63 ++V+G G GK+ + + + + L + DT G Sbjct: 42 ILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGL 97 >1IY1-A nrPDB Length = 254 Score = 27.1 bits (59), Expect = 4.7, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 +++VG GKT L + + + + + V +V L++TA Sbjct: 52 VLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVR-DLFETA 104 >5DO7-A nrPDB Length = 666 Score = 27.1 bits (59), Expect = 4.8, Method: Composition-based stats. Identities = 6/15 (40%), Positives = 9/15 (60%) Query: 8 LVVVGDGACGKTCLL 22 + ++G GKT LL Sbjct: 82 MCILGSSGSGKTTLL 96 >5D0U-A nrPDB Length = 714 Score = 27.1 bits (59), Expect = 4.9, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 10/19 (52%) Query: 8 LVVVGDGACGKTCLLIVFS 26 LV VG+ GKT + + Sbjct: 57 LVFVGETGSGKTTQIPQYV 75 >1EZ4-A nrPDB Length = 318 Score = 27.1 bits (59), Expect = 4.9, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 3/28 (10%) Query: 7 KLVVVGDGACGKT---CLLIVFSKDEFP 31 K+V+VGDGA G + + +EF Sbjct: 7 KVVLVGDGAVGSSYAFAMAQQGIAEEFV 34 >4HUQ-A nrPDB Length = 290 Score = 27.1 bits (59), Expect = 5.0, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 17/47 (36%), Gaps = 10/47 (21%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVE 54 L ++G GK+ L+ + PT I++D + Sbjct: 36 LAIIGHTGSGKSTLIQQL-----NALLKPTSG-----TIKIDEFTIT 72 >2DHR-A nrPDB Length = 499 Score = 27.1 bits (59), Expect = 5.1, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 1/54 (1%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTA 61 +++VG GKT L + + + + + V +V L++TA Sbjct: 67 VLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVR-DLFETA 119 >3L43-A nrPDB Length = 319 Score = 27.1 bits (59), Expect = 5.2, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 13/23 (56%) Query: 8 LVVVGDGACGKTCLLIVFSKDEF 30 + VVG + GK+ +L F +F Sbjct: 47 IAVVGGQSAGKSSVLENFVGRDF 69 >4UUD-B nrPDB Length = 864 Score = 27.1 bits (59), Expect = 5.2, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 13/23 (56%) Query: 8 LVVVGDGACGKTCLLIVFSKDEF 30 + VVG + GK+ +L F +F Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDF 56 >2AKA-B nrPDB Length = 299 Score = 27.1 bits (59), Expect = 5.2, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 13/23 (56%) Query: 8 LVVVGDGACGKTCLLIVFSKDEF 30 + VVG + GK+ +L F +F Sbjct: 29 IAVVGGQSAGKSSVLENFVGRDF 51 >5H7J-A nrPDB Length = 743 Score = 27.1 bits (59), Expect = 5.2, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 10/75 (13%) Query: 49 DGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDS---PDSLENIPEKWVPEVKH 105 +GK + L DT G D+ + D +++ P + + + VK Sbjct: 87 EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVKP 146 Query: 106 FCPNVPIILVANKKD 120 +L NK D Sbjct: 147 -------VLFINKVD 154 >2D62-A nrPDB Length = 375 Score = 27.1 bits (59), Expect = 5.2, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 20/38 (52%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD 45 LV++G CGKT L + + E P + +N VAD Sbjct: 35 LVLLGPSGCGKTTTLRMIAGLEEPTRGQIYIEDNLVAD 72 >2X2E-A nrPDB Length = 353 Score = 27.1 bits (59), Expect = 5.6, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 13/23 (56%) Query: 8 LVVVGDGACGKTCLLIVFSKDEF 30 + VVG + GK+ +L F +F Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDF 56 >4XGC-E nrPDB Length = 460 Score = 27.1 bits (59), Expect = 5.7, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 10/22 (45%) Query: 8 LVVVGDGACGKTCLLIVFSKDE 29 + + G GKT L F K+ Sbjct: 37 IYLFGHSGTGKTALTRAFLKEC 58 >4WIA-A nrPDB Length = 233 Score = 26.7 bits (58), Expect = 5.7, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 17/34 (50%), Gaps = 4/34 (11%) Query: 8 LVVVGDGACGKTCLLIV----FSKDEFPEVYVPT 37 +++ G+ + GK+ L F ++ + YV T Sbjct: 30 IIIEGEESTGKSVLCQRLAYGFLQNRYSVTYVST 63 >4FID-A nrPDB Length = 340 Score = 26.7 bits (58), Expect = 5.7, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 3/33 (9%) Query: 8 LVVVGDGACGKTCLLIVFS---KDEFPEVYVPT 37 ++++G G GK+ + FPE T Sbjct: 8 VMLLGSGESGKSTIAKQLKILFGGGFPEQERAT 40 >5I8Q-A nrPDB Length = 767 Score = 26.7 bits (58), Expect = 5.8, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 10/19 (52%) Query: 8 LVVVGDGACGKTCLLIVFS 26 +V VG+ GKT + F Sbjct: 112 MVFVGETGSGKTTQIPQFV 130 >6QUZ-A nrPDB Length = 587 Score = 26.7 bits (58), Expect = 5.8, Method: Composition-based stats. Identities = 5/16 (31%), Positives = 10/16 (62%) Query: 8 LVVVGDGACGKTCLLI 23 + V+G+ GK+ L+ Sbjct: 372 VAVLGETGSGKSTLMN 387 >2QAG-B nrPDB Length = 427 Score = 26.7 bits (58), Expect = 5.9, Method: Composition-based stats. Identities = 6/23 (26%), Positives = 12/23 (52%) Query: 8 LVVVGDGACGKTCLLIVFSKDEF 30 ++ VG+ GK+ L+ +F Sbjct: 45 ILCVGETGLGKSTLMDTLFNTKF 67 >1Z6G-A nrPDB Length = 218 Score = 26.7 bits (58), Expect = 5.9, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQV 53 LV+ G GK L+ +EFP + +V E + + V Sbjct: 26 LVICGPSGVGKGTLIKKLL-NEFPNYFYFSVSCTTRKKREKEKEGV 70 >2OUK-A nrPDB Length = 263 Score = 26.7 bits (58), Expect = 6.0, Method: Composition-based stats. Identities = 6/18 (33%), Positives = 9/18 (50%) Query: 8 LVVVGDGACGKTCLLIVF 25 +VV+G GK+ L Sbjct: 53 VVVIGPSGSGKSTFLRCL 70 >4Q7K-A nrPDB Length = 250 Score = 26.7 bits (58), Expect = 6.0, Method: Composition-based stats. Identities = 5/16 (31%), Positives = 10/16 (62%) Query: 8 LVVVGDGACGKTCLLI 23 + V+G+ GK+ L+ Sbjct: 34 VAVLGETGSGKSTLMN 49 >6BZR-B nrPDB Length = 251 Score = 26.7 bits (58), Expect = 6.3, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 9/16 (56%) Query: 7 KLVVVGDGACGKTCLL 22 K+ +VG GK+ L Sbjct: 42 KVGIVGRTGAGKSSLA 57 >6FKI-F nrPDB Length = 498 Score = 26.7 bits (58), Expect = 6.5, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 11/22 (50%) Query: 7 KLVVVGDGACGKTCLLIVFSKD 28 K+ + G GKT L++ + Sbjct: 167 KIGLFGGAGVGKTVLIMELINN 188 >4F4J-A nrPDB Length = 202 Score = 26.7 bits (58), Expect = 6.5, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 8/70 (11%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADI--EVDGKQVELALWD 59 ++ + +V+ G GK+ LL E+P+ + +V EV+GK D Sbjct: 14 GSMSRPIVISGPSGTGKSTLLKKLFA-EYPDSFGFSVPSTTRTPRAGEVNGKDYNFVSVD 72 Query: 60 TAGQEDYDRL 69 ++ + Sbjct: 73 -----EFKSM 77 >4C3Z-A nrPDB Length = 266 Score = 26.7 bits (58), Expect = 6.5, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 10/19 (52%) Query: 8 LVVVGDGACGKTCLLIVFS 26 + VVG CGK+ LL Sbjct: 59 VAVVGQVGCGKSSLLSALL 77 >3WMF-A nrPDB Length = 621 Score = 26.7 bits (58), Expect = 6.5, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 11/21 (52%), Gaps = 3/21 (14%) Query: 8 LVVVGDGACGKTC---LLIVF 25 + +VG GK+ LL+ F Sbjct: 382 VAIVGGSGAGKSTIIQLLMRF 402 >2W6I-D nrPDB Length = 528 Score = 26.7 bits (58), Expect = 6.5, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 11/22 (50%) Query: 7 KLVVVGDGACGKTCLLIVFSKD 28 K+ + G GKT L++ + Sbjct: 201 KIGLFGGAGVGKTVLIMELINN 222 >2ONJ-A nrPDB Length = 578 Score = 26.7 bits (58), Expect = 6.5, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 10/47 (21%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVE 54 + VG GK+ L+ + P Y T I +DG ++ Sbjct: 370 VAFVGMSGGGKSTLI-----NLIPRFYDVTSG-----QILIDGHNIK 406 >2CBZ-A nrPDB Length = 237 Score = 26.7 bits (58), Expect = 6.5, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 10/19 (52%) Query: 8 LVVVGDGACGKTCLLIVFS 26 + VVG CGK+ LL Sbjct: 34 VAVVGQVGCGKSSLLSALL 52 >4R98-A nrPDB Length = 271 Score = 26.7 bits (58), Expect = 6.5, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 46/137 (33%), Gaps = 13/137 (9%) Query: 10 VVGDGACGKTCLLIVFSKD-EFPEVYVPTVFENYVADIEVDGKQVEL-------ALWDTA 61 ++G+ GKT L + + + E QV L +L + Sbjct: 8 LIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTDHQVTLVDLPGTYSLTTIS 67 Query: 62 GQEDYD-RLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKD 120 Q D ++ D L+ VD+ N+ ++ +P I+ N D Sbjct: 68 SQTSLDEQIACHYILSGDADLLINVVDAS----NLERNLYLTLQLLELGIPCIVALNMLD 123 Query: 121 LRSDEHVRTELARMKQE 137 + +++R E+ + Sbjct: 124 IAEKQNIRIEIDALSAR 140 >3D0O-A nrPDB Length = 317 Score = 26.7 bits (58), Expect = 6.7, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 22/53 (41%), Gaps = 10/53 (18%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWD 59 K+V++G+GA G + + + I++D ++V + D Sbjct: 8 KVVLIGNGAVG-SSYAFSLVNQSIVDE---------LVIIDLDTEKVRGDVMD 50 >5A3F-A nrPDB Length = 754 Score = 26.7 bits (58), Expect = 6.7, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 13/23 (56%) Query: 8 LVVVGDGACGKTCLLIVFSKDEF 30 + VVG + GK+ +L F +F Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDF 56 >5H7K-A nrPDB Length = 397 Score = 26.7 bits (58), Expect = 6.8, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 10/75 (13%) Query: 49 DGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDS---PDSLENIPEKWVPEVKH 105 +GK + L DT G D+ + D +++ P + + + VK Sbjct: 87 EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVKP 146 Query: 106 FCPNVPIILVANKKD 120 +L NK D Sbjct: 147 -------VLFINKVD 154 >1WDT-A nrPDB Length = 665 Score = 26.7 bits (58), Expect = 6.8, Method: Composition-based stats. Identities = 7/28 (25%), Positives = 11/28 (39%) Query: 2 AAIRKKLVVVGDGACGKTCLLIVFSKDE 29 A+ + + +VG GKT L Sbjct: 6 GAMIRTVALVGHAGSGKTTLTEALLYKT 33 >5IK2-D nrPDB Length = 462 Score = 26.7 bits (58), Expect = 7.0, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 10/22 (45%) Query: 7 KLVVVGDGACGKTCLLIVFSKD 28 K+ + G GKT L+ + Sbjct: 146 KIGLFGGAGVGKTVLIQELINN 167 >5CDF-E nrPDB Length = 474 Score = 26.7 bits (58), Expect = 7.1, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 11/22 (50%) Query: 7 KLVVVGDGACGKTCLLIVFSKD 28 K+ + G GKT L++ + Sbjct: 146 KIGLFGGAGVGKTVLIMELINN 167 >5A9Z-CA nrPDB Length = 593 Score = 26.7 bits (58), Expect = 7.1, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 38/128 (29%), Gaps = 27/128 (21%) Query: 17 GKTCLLIVFSK--DEFPEVYVP----------------TVFENYVADIEVDGKQVELALW 58 GKT L+ + F T+ A I+ D + + Sbjct: 17 GKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAAIKWD---YRINIV 73 Query: 59 DTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLEN-IPEKWVPEVKHFCPNVPIILVAN 117 DT G D+ D +L+ + + +P+ K F + I+V N Sbjct: 74 DTPGHADFGGEVERVMSMVDSVLLVVD-----AFDGPMPQTRFVTKKAFAYGLKPIVVIN 128 Query: 118 KKDLRSDE 125 K D Sbjct: 129 KVDRPGAR 136 >2XND-D nrPDB Length = 467 Score = 26.7 bits (58), Expect = 7.1, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 11/22 (50%) Query: 7 KLVVVGDGACGKTCLLIVFSKD 28 K+ + G GKT L++ + Sbjct: 143 KIGLFGGAGVGKTVLIMELINN 164 >2R6F-A nrPDB Length = 972 Score = 26.7 bits (58), Expect = 7.2, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 1/20 (5%) Query: 5 RKKLVVV-GDGACGKTCLLI 23 R KLVV+ G GK+ L Sbjct: 43 RGKLVVLTGLSGSGKSSLAF 62 >1IQP-A nrPDB Length = 327 Score = 26.7 bits (58), Expect = 7.3, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 71/197 (36%), Gaps = 36/197 (18%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVP---TVFENYVADIEVDGKQVELALWDTAGQE 64 L+ G GKT + +++ F E + + + I V ++V+ Sbjct: 49 LLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGINVIREKVK---------- 98 Query: 65 DYDRLRPLSYPDTDVILMCFSVDSPDSL-ENIPEKWVPEVKHFCPNVPIILVAN------ 117 ++ R +P + F +D D+L ++ + ++ F NV IL N Sbjct: 99 EFARTKP---IGGASFKIIF-LDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKII 154 Query: 118 -----KKDLRSDEHVRTELARMKQEPVRTDDGRAMAVR-IQAYDYL-ECSAKTKEGVREV 170 + + +R E + + ++G + +QA Y+ E + + + Sbjct: 155 EPIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQA 214 Query: 171 FETATRAALQKRYGSQN 187 AAL K+ +N Sbjct: 215 -----AAALDKKITDEN 226 >6DLV-b nrPDB Length = 748 Score = 26.7 bits (58), Expect = 7.3, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 13/23 (56%) Query: 8 LVVVGDGACGKTCLLIVFSKDEF 30 + VVG + GK+ +L F +F Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDF 56 >3EPJ-A nrPDB Length = 409 Score = 26.7 bits (58), Expect = 7.3, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 1/25 (4%) Query: 5 RKKLVVV-GDGACGKTCLLIVFSKD 28 KK++V+ G GK+ L I ++ Sbjct: 1 SKKVIVIAGTTGVGKSQLSIQLAQK 25 >1TAG-A nrPDB Length = 324 Score = 26.7 bits (58), Expect = 7.3, Method: Composition-based stats. Identities = 6/18 (33%), Positives = 12/18 (66%) Query: 7 KLVVVGDGACGKTCLLIV 24 KL+++G G GK+ ++ Sbjct: 5 KLLLLGAGESGKSTIVKQ 22 >3UX8-A nrPDB Length = 670 Score = 26.7 bits (58), Expect = 7.4, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 1/20 (5%) Query: 5 RKKLVVV-GDGACGKTCLLI 23 R KLVV+ G GK+ L Sbjct: 43 RGKLVVLTGLSGSGKSSLAF 62 >6DJQ-A nrPDB Length = 391 Score = 26.3 bits (57), Expect = 7.5, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 13/23 (56%) Query: 8 LVVVGDGACGKTCLLIVFSKDEF 30 +VVVG + GK+ +L +F Sbjct: 48 IVVVGSQSSGKSSVLENIVGRDF 70 >3KAO-A nrPDB Length = 329 Score = 26.3 bits (57), Expect = 7.8, Method: Composition-based stats. Identities = 6/41 (14%), Positives = 17/41 (41%), Gaps = 2/41 (4%) Query: 76 DTDVILMCFSVDSPDSLENIPEKWVPEVKHFC--PNVPIIL 114 + L+ + VD + + + ++ + C ++P L Sbjct: 125 NAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPFFL 165 >4A2I-V nrPDB Length = 277 Score = 26.3 bits (57), Expect = 8.0, Method: Composition-based stats. Identities = 5/18 (27%), Positives = 7/18 (38%) Query: 9 VVVGDGACGKTCLLIVFS 26 + G GK+ LL Sbjct: 164 IFAGQSGVGKSSLLNALL 181 >4XRP-A nrPDB Length = 312 Score = 26.3 bits (57), Expect = 8.2, Method: Composition-based stats. Identities = 7/25 (28%), Positives = 11/25 (44%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPE 32 L++VG GK+ F + E Sbjct: 14 LILVGAPGSGKSTFARYFIRTEDNW 38 >5XU1-A nrPDB Length = 245 Score = 26.3 bits (57), Expect = 8.4, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 5/43 (11%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDG 50 + ++G GK+ L+ + + PT E Y+ EV G Sbjct: 49 VAIMGPSGSGKSTLM-----NTIGMLDTPTSGEYYLEGQEVAG 86 >5CA8-A nrPDB Length = 692 Score = 26.3 bits (57), Expect = 8.4, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 10/24 (41%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFP 31 + V G + GK+ LL F Sbjct: 61 ISVFGSQSTGKSTLLNRLFNTNFD 84 >4NP6-A nrPDB Length = 217 Score = 26.3 bits (57), Expect = 8.4, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 7/60 (11%) Query: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVD---GKQVELALWDTAGQ 63 +++++G GK F ++F + T + A I+ GKQ + + D AGQ Sbjct: 5 RIILLGAPGAGKGTQA-QFIMEKFGIPQIST-GDMLRAAIKAGTELGKQAKAVI-D-AGQ 60 >3OZX-A nrPDB Length = 538 Score = 26.3 bits (57), Expect = 8.4, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 13/27 (48%) Query: 10 VVGDGACGKTCLLIVFSKDEFPEVYVP 36 V+G GKT +L + + + P P Sbjct: 30 VLGKNGVGKTTVLKILAGEIIPNFGDP 56 >1T9H-A nrPDB Length = 307 Score = 26.3 bits (57), Expect = 8.4, Method: Composition-based stats. Identities = 6/15 (40%), Positives = 7/15 (46%) Query: 9 VVVGDGACGKTCLLI 23 V G GK+ LL Sbjct: 177 VFAGQSGVGKSSLLN 191 >5NO4-Z nrPDB Length = 313 Score = 26.3 bits (57), Expect = 8.5, Method: Composition-based stats. Identities = 5/18 (27%), Positives = 7/18 (38%) Query: 9 VVVGDGACGKTCLLIVFS 26 + G GK+ LL Sbjct: 178 IFAGQSGVGKSSLLNALL 195 >2ZBK-A nrPDB Length = 389 Score = 26.3 bits (57), Expect = 8.5, Method: Composition-based stats. Identities = 6/26 (23%), Positives = 13/26 (50%) Query: 57 LWDTAGQEDYDRLRPLSYPDTDVILM 82 ++D ++Y +R L Y +L+ Sbjct: 89 IYDALVSDEYPTIRDLYYRGKHSLLL 114 >6AMN-A nrPDB Length = 349 Score = 26.3 bits (57), Expect = 8.7, Method: Composition-based stats. Identities = 7/30 (23%), Positives = 16/30 (53%), Gaps = 1/30 (3%) Query: 9 VVVGDGACGKTCLLIVFSKDEFPEVYVPTV 38 ++G+ GKT ++ ++ + VPT+ Sbjct: 206 CLIGEPGIGKTAIIEGVAQ-RIIDDDVPTI 234 >5FM7-A nrPDB Length = 464 Score = 26.3 bits (57), Expect = 9.1, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 55/152 (36%), Gaps = 22/152 (14%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYD 67 +++ G GKT L + S++ ++ + + + EV +V + E++ Sbjct: 69 VLLAGGPGTGKTALALAISQELGTKIPFCPITGSEIYSTEVKKTEVLM--------ENFR 120 Query: 68 RLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHV 127 R L +T V + E PE+ + + + +L+ K Sbjct: 121 RAIGLRVRETK------DVYEGEVTEMTPEEAENPLGGYGKTISTLLIGLKS-------- 166 Query: 128 RTELARMKQEPVRTDDGRAMAVRIQAYDYLEC 159 +++ +P + + V++ Y+E Sbjct: 167 ARGQKKLRLDPSIYEAIQKERVQVGDVIYIET 198 >4XD7-D nrPDB Length = 483 Score = 26.3 bits (57), Expect = 9.4, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 10/22 (45%) Query: 7 KLVVVGDGACGKTCLLIVFSKD 28 K+ + G GKT L+ + Sbjct: 163 KIGLFGGAGVGKTVLIQELIHN 184 >2YKR-W nrPDB Length = 350 Score = 26.3 bits (57), Expect = 9.4, Method: Composition-based stats. Identities = 5/18 (27%), Positives = 7/18 (38%) Query: 9 VVVGDGACGKTCLLIVFS 26 + G GK+ LL Sbjct: 211 IFAGQSGVGKSSLLNALL 228 >5VY8-A nrPDB Length = 908 Score = 26.3 bits (57), Expect = 9.6, Method: Composition-based stats. Identities = 7/30 (23%), Positives = 16/30 (53%), Gaps = 1/30 (3%) Query: 9 VVVGDGACGKTCLLIVFSKDEFPEVYVPTV 38 ++G+ GKT ++ ++ + VPT+ Sbjct: 209 CLIGEPGIGKTAIIEGVAQ-RIIDDDVPTI 237 >2I3B-A nrPDB Length = 189 Score = 26.3 bits (57), Expect = 9.6, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 20/50 (40%), Gaps = 2/50 (4%) Query: 8 LVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELAL 57 + + G GKT L+ + + VP Y ++ G+++ + Sbjct: 4 VFLTGPPGVGKTTLIHK-ASEVLKSSGVPVDGF-YTEEVRQGGRRIGFDV 51 >4XIG-S nrPDB Length = 363 Score = 26.3 bits (57), Expect = 9.7, Method: Composition-based stats. Identities = 7/15 (46%), Positives = 10/15 (66%) Query: 8 LVVVGDGACGKTCLL 22 +V+VG CGK+ L Sbjct: 33 VVLVGPSGCGKSTTL 47 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.315 0.156 0.483 Lambda K H 0.267 0.0477 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,888,380 Number of Sequences: 36641 Number of extensions: 387031 Number of successful extensions: 2809 Number of sequences better than 10.0: 493 Number of HSP's better than 10.0 without gapping: 503 Number of HSP's successfully gapped in prelim test: 175 Number of HSP's that attempted gapping in prelim test: 1645 Number of HSP's gapped (non-prelim): 752 length of query: 196 length of database: 10,336,785 effective HSP length: 92 effective length of query: 104 effective length of database: 6,965,813 effective search space: 724444552 effective search space used: 724444552 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 57 (26.3 bits)