BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P62322 (91 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6AH0-t nrPDB 183 1e-47 3PGG-A nrPDB 91 1e-19 3SWN-A nrPDB 89 4e-19 4EMK-A nrPDB 89 5e-19 4M77-E nrPDB 80 2e-16 3JCR-3 nrPDB 44 2e-05 6QW6-4e nrPDB 43 3e-05 1LJO-A nrPDB 43 3e-05 6QDV-e nrPDB 43 3e-05 1JBM-A nrPDB 41 1e-04 3SWN-C nrPDB 40 3e-04 3JB9-H nrPDB 39 7e-04 6ASO-C nrPDB 38 9e-04 4EMH-A nrPDB 37 0.001 1TH7-A nrPDB 37 0.001 3JB9-J nrPDB 36 0.003 5GMK-i nrPDB 36 0.005 3JB9-E nrPDB 35 0.007 6ASO-G nrPDB 35 0.010 4EMG-A nrPDB 34 0.011 5GM6-g nrPDB 33 0.018 6J6Q-g nrPDB 33 0.019 5MKL-A1 nrPDB 33 0.029 6AH0-d nrPDB 33 0.030 4C8Q-A nrPDB 33 0.030 4M75-A nrPDB 33 0.033 6QX9-1b nrPDB 33 0.034 1I8F-A nrPDB 32 0.058 4XQ3-A nrPDB 31 0.12 5MQF-a nrPDB 30 0.16 6QX9-67 nrPDB 30 0.20 3JB9-G nrPDB 29 0.37 5LJ3-g nrPDB 29 0.43 3G79-A nrPDB 29 0.50 6AH0-z nrPDB 28 0.61 3DG6-A nrPDB 27 2.2 5O31-q nrPDB 27 2.3 6QX9-62 nrPDB 27 2.5 4N0A-C nrPDB 27 2.6 5VSU-B nrPDB 27 2.9 4C8Q-B nrPDB 26 3.5 5LQW-b nrPDB 26 4.0 4A0K-A nrPDB 26 4.3 >6AH0-t nrPDB Length = 91 Score = 183 bits (465), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 91/91 (100%), Positives = 91/91 (100%) Query: 1 MAANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT 60 MAANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT Sbjct: 1 MAANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT 60 Query: 61 PEGRRITKLDQILLNGNNITMLVPGGEGPEV 91 PEGRRITKLDQILLNGNNITMLVPGGEGPEV Sbjct: 61 PEGRRITKLDQILLNGNNITMLVPGGEGPEV 91 >3PGG-A nrPDB Length = 121 Score = 90.5 bits (223), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 44/88 (50%), Positives = 60/88 (68%), Gaps = 12/88 (13%) Query: 12 LLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRIT---- 67 +LPL L+DKCIG+RI++VMK DKE G L GFD++VNMVL+DV E+ + I+ Sbjct: 27 ILPLALIDKCIGNRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQEYGFKADEEDISGGNK 86 Query: 68 --------KLDQILLNGNNITMLVPGGE 87 +L+ ILL+GNN+ MLVPGG+ Sbjct: 87 KLKRVMVNRLETILLSGNNVAMLVPGGD 114 >3SWN-A nrPDB Length = 82 Score = 89.0 bits (219), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 45/79 (56%), Positives = 63/79 (79%), Gaps = 3/79 (3%) Query: 12 LLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQ 71 +LPLEL+DKCIGS + ++MKS++E GTL+GFDD+VN+VL+DVTE++ T G K + Sbjct: 7 ILPLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEYD-TVTGVT-EKHSE 64 Query: 72 ILLNGNNITMLVPGGEGPE 90 +LLNGN + ML+PGG+ PE Sbjct: 65 MLLNGNGMCMLIPGGK-PE 82 >4EMK-A nrPDB Length = 94 Score = 88.6 bits (218), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 43/79 (54%), Positives = 61/79 (77%), Gaps = 3/79 (3%) Query: 12 LLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQ 71 +LPLEL+DKCIGS + ++MKS++E GTL+GFDD+VN+VL+DVTE++ K + Sbjct: 19 ILPLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEYDTVT--GVTEKHSE 76 Query: 72 ILLNGNNITMLVPGGEGPE 90 +LLNGN + ML+PGG+ PE Sbjct: 77 MLLNGNGMCMLIPGGK-PE 94 >4M77-E nrPDB Length = 93 Score = 80.1 bits (196), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 42/82 (51%), Positives = 61/82 (74%), Gaps = 5/82 (6%) Query: 11 QLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGR-RITKL 69 ++LPLE++DK I ++ IV++S++E GTL+GFDDFVN++LED E+ I PE R K+ Sbjct: 5 EILPLEVIDKTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVEWLIDPEDESRNEKV 64 Query: 70 DQ----ILLNGNNITMLVPGGE 87 Q +LL+GNNI +LVPGG+ Sbjct: 65 MQHHGRMLLSGNNIAILVPGGK 86 >3JCR-3 nrPDB Length = 102 Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 40/75 (53%) Query: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQIL 73 PL+L+ + RI++ M++D+E+ G L +D +NM+L DV E T E T + Sbjct: 17 PLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYK 76 Query: 74 LNGNNITMLVPGGEG 88 NI ML G+G Sbjct: 77 STKRNIPMLFVRGDG 91 >6QW6-4e nrPDB Length = 92 Score = 43.1 bits (100), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 6/73 (8%) Query: 14 PLELVDKCIG--SRIHIVM--KSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKL 69 P+ L+ + + SRI + + + + I G ++GFD+++N+VL+D E + R+ +L Sbjct: 17 PINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRK--QL 74 Query: 70 DQILLNGNNITML 82 +I+L G+NIT+L Sbjct: 75 GRIMLKGDNITLL 87 >1LJO-A nrPDB Length = 77 Score = 43.1 bits (100), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 45/76 (59%), Gaps = 4/76 (5%) Query: 10 SQLLPLELVDKCIGSRIHIVMKSDK-EIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITK 68 + +LP ++V +G I + MK ++ ++VG L G DD++N+ L + E + ++ Sbjct: 2 AMVLPNQMVKSMVGKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAMECKGE---EKVRS 58 Query: 69 LDQILLNGNNITMLVP 84 L +I+L GNN+ ++ P Sbjct: 59 LGEIVLRGNNVVLIQP 74 >6QDV-e nrPDB Length = 81 Score = 42.7 bits (99), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 46/73 (63%), Gaps = 6/73 (8%) Query: 14 PLELVDKCIG--SRIHIVM--KSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKL 69 P+ L+ + + SRI + + + + I G ++GFD+++N+VL+D E + R+ +L Sbjct: 7 PINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRK--QL 64 Query: 70 DQILLNGNNITML 82 +I+L G+NIT+L Sbjct: 65 GRIMLKGDNITLL 77 >1JBM-A nrPDB Length = 86 Score = 40.8 bits (94), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Query: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQIL 73 PL+ + + S + I +K D+E G L FD +N+VL D E E +G +L +L Sbjct: 14 PLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELE---DGEVTRRLGTVL 70 Query: 74 LNGNNITMLVPG 85 + G+NI + G Sbjct: 71 IRGDNIVYISRG 82 >3SWN-C nrPDB Length = 117 Score = 39.7 bits (91), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%) Query: 24 SRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRIT----KLDQILLNGNNI 79 RI ++I G L GFD +N+VL+DV E PE ++T KL +++ G + Sbjct: 38 QRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTL 97 Query: 80 TMLVP 84 ++ P Sbjct: 98 VLIAP 102 >3JB9-H nrPDB Length = 84 Score = 38.5 bits (88), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 3/57 (5%) Query: 26 IHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITML 82 I + ++D + G + GFD+F+N+VL+D + + R +L +ILL G+NIT++ Sbjct: 28 IWLFEQTDIRLQGQIRGFDEFMNIVLDDAVQVDAKNNKR---ELGRILLKGDNITLI 81 >6ASO-C nrPDB Length = 97 Score = 38.1 bits (87), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 10/81 (12%) Query: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEF-------EITPEGRRI 66 PL+L+ + R++I ++ + +VGTL FD N+VL D E E++ RR Sbjct: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRC 63 Query: 67 TKLDQILLNGNNITMLVPGGE 87 + + + G+ +T++ E Sbjct: 64 ---EMVFIRGDTVTLISTPSE 81 >4EMH-A nrPDB Length = 105 Score = 37.4 bits (85), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Query: 12 LLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQ 71 +LPL L++ G I + +K+ + G L D+++N+ L +V P+G + +L + Sbjct: 15 MLPLTLLNATQGRPILVELKNGETFNGHLENCDNYMNLTLREV--IRTMPDGDKFFRLPE 72 Query: 72 ILLNGNNITML 82 + GNNI L Sbjct: 73 CYIRGNNIKYL 83 >1TH7-A nrPDB Length = 81 Score = 37.4 bits (85), Expect = 0.001, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Query: 28 IVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVP 84 + +K +KE+ G L +D +N+VL D E + G+ KL I++ G+N+ ++ P Sbjct: 24 VKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGK---KLGTIVIRGDNVILISP 77 >3JB9-J nrPDB Length = 77 Score = 36.2 bits (82), Expect = 0.003, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 3/63 (4%) Query: 20 KCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNI 79 K + ++ + + +++ G L G+D F+N+VLED E ++ E K+ + + GN++ Sbjct: 11 KYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIEEKVDGEK---VKIGSVAIRGNSV 67 Query: 80 TML 82 M+ Sbjct: 68 IMI 70 >5GMK-i nrPDB Length = 94 Score = 35.8 bits (81), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 36/53 (67%), Gaps = 5/53 (9%) Query: 35 EIVGTLLGFDDFVNMVLEDVTEFEI-TPEGR----RITKLDQILLNGNNITML 82 I G ++GFD+F+N+V+++ E + + +G+ + T L +ILL G+NIT++ Sbjct: 38 RIKGKIVGFDEFMNVVIDEAVEIPVNSADGKEDVEKGTPLGKILLKGDNITLI 90 >3JB9-E nrPDB Length = 147 Score = 35.0 bits (79), Expect = 0.007, Method: Compositional matrix adjust. Identities = 13/33 (39%), Positives = 20/33 (60%) Query: 26 IHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFE 58 +++ K + VG LL FD F+N+VL D E+ Sbjct: 14 LNVTTKDGRTFVGQLLAFDGFMNLVLSDCQEYR 46 >6ASO-G nrPDB Length = 115 Score = 34.7 bits (78), Expect = 0.010, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 28/50 (56%) Query: 20 KCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKL 69 K S+I + + K ++G L G+D +N+VL+D E+ P+ T+L Sbjct: 32 KYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTEL 81 >4EMG-A nrPDB Length = 93 Score = 34.3 bits (77), Expect = 0.011, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 27/43 (62%) Query: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTE 56 PL+LV + +++ ++ D+E+ G L +D+ +NMVL D E Sbjct: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEE 52 >5GM6-g nrPDB Length = 94 Score = 33.5 bits (75), Expect = 0.018, Method: Compositional matrix adjust. Identities = 17/76 (22%), Positives = 43/76 (56%), Gaps = 6/76 (7%) Query: 14 PLELVDKCIGSR--IHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITK--- 68 P+ L++ + +R + I ++++ +I+ + FD NMVLE+V E +G+ + Sbjct: 16 PMSLINDAMVTRTPVIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRER 75 Query: 69 -LDQILLNGNNITMLV 83 + ++ L G+++ +++ Sbjct: 76 FISKLFLRGDSVIVVL 91 >6J6Q-g nrPDB Length = 110 Score = 33.5 bits (75), Expect = 0.019, Method: Compositional matrix adjust. Identities = 17/76 (22%), Positives = 43/76 (56%), Gaps = 6/76 (7%) Query: 14 PLELVDKCIGSR--IHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITK--- 68 P+ L++ + +R + I ++++ +I+ + FD NMVLE+V E +G+ + Sbjct: 30 PMSLINDAMVTRTPVIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRER 89 Query: 69 -LDQILLNGNNITMLV 83 + ++ L G+++ +++ Sbjct: 90 FISKLFLRGDSVIVVL 105 >5MKL-A1 nrPDB Length = 87 Score = 33.1 bits (74), Expect = 0.029, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 5/68 (7%) Query: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR--ITKLDQ 71 PL+ + + + + +K+ +E VG L D +N+VL+D TE+ EG + K + Sbjct: 8 PLKSLKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEYR---EGTSDPVAKYGR 64 Query: 72 ILLNGNNI 79 +L+ G+NI Sbjct: 65 VLIRGSNI 72 >6AH0-d nrPDB Length = 76 Score = 33.1 bits (74), Expect = 0.030, Method: Compositional matrix adjust. Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 4/73 (5%) Query: 10 SQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKL 69 S+ P EL K + ++ + + + + G L GFD F+N+V+++ E + + I Sbjct: 2 SKAHPPEL-KKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNI--- 57 Query: 70 DQILLNGNNITML 82 +++ GN+I ML Sbjct: 58 GMVVIRGNSIIML 70 >4C8Q-A nrPDB Length = 101 Score = 33.1 bits (74), Expect = 0.030, Method: Compositional matrix adjust. Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 22 IGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQ--ILLNGNNI 79 + +I ++++ + + G L FD + N++L+D E E + + D+ ++ G N+ Sbjct: 6 VDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGENV 65 Query: 80 TML 82 ML Sbjct: 66 VML 68 >4M75-A nrPDB Length = 144 Score = 32.7 bits (73), Expect = 0.033, Method: Compositional matrix adjust. Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Query: 21 CIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQ--ILLNGNN 78 + +I ++++ + + G L FD + N++L+D E E + + D+ ++ G N Sbjct: 21 SVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGEN 80 Query: 79 ITML 82 + ML Sbjct: 81 VVML 84 >6QX9-1b nrPDB Length = 240 Score = 32.7 bits (73), Expect = 0.034, Method: Compositional matrix adjust. Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 7/76 (9%) Query: 22 IGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEF-EITPEGRRITKLDQ------ILL 74 I R+ +++ + +GT FD +N++L D EF +I P+ + + ++ +LL Sbjct: 13 IDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKRVLGLVLL 72 Query: 75 NGNNITMLVPGGEGPE 90 G N+ + G P+ Sbjct: 73 RGENLVSMTVEGPPPK 88 >1I8F-A nrPDB Length = 81 Score = 32.0 bits (71), Expect = 0.058, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 4/63 (6%) Query: 22 IGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITM 81 IG ++ + ++ EI G L FD VN++LED E +G + K +++ G N+ Sbjct: 20 IGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEI---IDG-NVYKRGTMVVRGENVLF 75 Query: 82 LVP 84 + P Sbjct: 76 ISP 78 >4XQ3-A nrPDB Length = 91 Score = 30.8 bits (68), Expect = 0.12, Method: Compositional matrix adjust. Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%) Query: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEF-EITPEGRRITKLDQI 72 PL+ + I + + +K E +G L D +N+VL D TE E T E + K ++ Sbjct: 12 PLKSLRTAINRIVLVKLKDGSEYIGKLEQTDGTMNLVLRDCTEIREGTSEP--VAKYGRV 69 Query: 73 LLNGNNI 79 L+ G+NI Sbjct: 70 LIRGSNI 76 >5MQF-a nrPDB Length = 118 Score = 30.4 bits (67), Expect = 0.16, Method: Compositional matrix adjust. Identities = 13/45 (28%), Positives = 29/45 (64%), Gaps = 2/45 (4%) Query: 14 PLELVDKCIGSRIHIVM--KSDKEIVGTLLGFDDFVNMVLEDVTE 56 PL ++ + + + +++ +++K+++G + FD NMVLE+V E Sbjct: 28 PLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 72 >6QX9-67 nrPDB Length = 103 Score = 30.4 bits (67), Expect = 0.20, Method: Compositional matrix adjust. Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 8/89 (8%) Query: 1 MAANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT 60 MA +L L K I I + + +E G L GFD +N+VL+ E+ Sbjct: 1 MADKEKKKKESILDLS---KYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRD 57 Query: 61 PEGR-RIT----KLDQILLNGNNITMLVP 84 P+ + ++T +L ++ G ++ ++ P Sbjct: 58 PDDQYKLTEDTRQLGLVVCRGTSVVLICP 86 >3JB9-G nrPDB Length = 115 Score = 29.3 bits (64), Expect = 0.37, Method: Compositional matrix adjust. Identities = 20/82 (24%), Positives = 46/82 (56%), Gaps = 12/82 (14%) Query: 14 PLELVDKCIGSRIHIVM--KSDKEIVGTLLGFDDFVNMVLEDV----TEFEITPEGRR-- 65 PL ++ + + + +++ +++K+++ + FD NMVLE+V TE + T G++ Sbjct: 29 PLSVLQQAVKNHDQVLINCRNNKKLLARVKAFDRHSNMVLENVKEMWTEKKRTASGKKGK 88 Query: 66 -ITK---LDQILLNGNNITMLV 83 I K + ++ L G+ + ++V Sbjct: 89 AINKDRFISKMFLRGDGVVLVV 110 >5LJ3-g nrPDB Length = 77 Score = 29.3 bits (64), Expect = 0.43, Method: Compositional matrix adjust. Identities = 12/38 (31%), Positives = 23/38 (60%) Query: 20 KCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEF 57 K + +I + + +++ G L G+D F+N+VL+D E Sbjct: 9 KYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEI 46 >3G79-A nrPDB Length = 478 Score = 28.9 bits (63), Expect = 0.50, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 11 QLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLD 70 ++L + K G +I ++ + + + G G ++ + V++ +FE TP+ RI++LD Sbjct: 45 KVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVK-AGKFECTPDFSRISELD 103 Query: 71 QILL 74 + L Sbjct: 104 AVTL 107 >6AH0-z nrPDB Length = 96 Score = 28.5 bits (62), Expect = 0.61, Method: Compositional matrix adjust. Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEI-TPEGRRITKLDQILLNG 76 ++ I + ++ + IVGTL GFD +N++L++ E + +G L ++ G Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64 Query: 77 NNITML 82 +N+ ++ Sbjct: 65 DNVAVI 70 >3DG6-A nrPDB Length = 367 Score = 26.9 bits (58), Expect = 2.2, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 15/71 (21%) Query: 32 SDKEIVGTLLGFDDFVNMVLE--------DVTEFEITPEGRRITKLDQILLN------GN 77 +D+ V +LGFDD V MV E + F++ GRR +LD ++ G+ Sbjct: 126 TDRMRVSHMLGFDDPVKMVAEAERIRETYGINTFKVKV-GRRPVQLDTAVVRALRERFGD 184 Query: 78 NITMLVPGGEG 88 I + V G G Sbjct: 185 AIELYVDGNRG 195 >5O31-q nrPDB Length = 145 Score = 26.6 bits (57), Expect = 2.3, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 4/60 (6%) Query: 26 IHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPG 85 + ++ +++ VGTL+G D + N ED +F GR + +NG N V G Sbjct: 24 LRVLFRANDVRVGTLVGEDKYGNKYYEDNKQF----FGRHRWVIYTTEMNGKNTFWDVDG 79 >6QX9-62 nrPDB Length = 95 Score = 26.6 bits (57), Expect = 2.5, Method: Compositional matrix adjust. Identities = 11/34 (32%), Positives = 21/34 (61%) Query: 22 IGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVT 55 +G + + +K+D I GTL D ++N+ L D++ Sbjct: 11 VGKDVVVELKNDLSICGTLHSVDQYLNIKLTDIS 44 >4N0A-C nrPDB Length = 109 Score = 26.6 bits (57), Expect = 2.6, Method: Compositional matrix adjust. Identities = 12/44 (27%), Positives = 24/44 (54%) Query: 12 LLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVT 55 +L + + + +K+D EI GTL D F+N+ L++++ Sbjct: 15 MLFFSFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNIS 58 >5VSU-B nrPDB Length = 98 Score = 26.6 bits (57), Expect = 2.9, Method: Compositional matrix adjust. Identities = 12/44 (27%), Positives = 24/44 (54%) Query: 12 LLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVT 55 +L + + + +K+D EI GTL D F+N+ L++++ Sbjct: 4 MLFFSFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNIS 47 >4C8Q-B nrPDB Length = 105 Score = 26.2 bits (56), Expect = 3.5, Method: Compositional matrix adjust. Identities = 12/43 (27%), Positives = 23/43 (53%) Query: 13 LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVT 55 L + + + +K+D EI GTL D F+N+ L++++ Sbjct: 12 LFFSFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNIS 54 >5LQW-b nrPDB Length = 196 Score = 25.8 bits (55), Expect = 4.0, Method: Compositional matrix adjust. Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 5/51 (9%) Query: 22 IGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQI 72 I ++ ++ + + +G L+ FD +N+VL + E E P+ T+LD++ Sbjct: 16 IDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIE-ERVPK----TQLDKL 61 >4A0K-A nrPDB Length = 742 Score = 25.8 bits (55), Expect = 4.3, Method: Composition-based stats. Identities = 14/33 (42%), Positives = 20/33 (60%) Query: 20 KCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLE 52 K G+ I I + DK++V LL F D V+ V+E Sbjct: 328 KTFGTAIVINPEKDKDMVQDLLDFKDKVDHVIE 360 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6AH0-t nrPDB 130 2e-31 3PGG-A nrPDB 98 7e-22 4EMK-A nrPDB 97 2e-21 3SWN-A nrPDB 97 2e-21 4M77-E nrPDB 89 4e-19 3JCR-3 nrPDB 86 4e-18 1JBM-A nrPDB 82 4e-17 4EMH-A nrPDB 80 2e-16 6ASO-C nrPDB 78 7e-16 6QW6-4e nrPDB 77 1e-15 6QDV-e nrPDB 77 2e-15 1TH7-A nrPDB 72 5e-14 3SWN-C nrPDB 72 8e-14 1LJO-A nrPDB 72 8e-14 3JB9-H nrPDB 70 2e-13 Sequences not found previously or not previously below threshold: 4EMG-A nrPDB 75 7e-15 6QW6-64 nrPDB 64 2e-11 5GMK-i nrPDB 63 2e-11 1I8F-A nrPDB 62 8e-11 6QX9-67 nrPDB 61 1e-10 5MKL-A1 nrPDB 57 1e-09 5ZWM-s nrPDB 56 3e-09 6ASO-G nrPDB 56 4e-09 4M75-G nrPDB 55 9e-09 4M75-A nrPDB 54 1e-08 4C8Q-D nrPDB 54 2e-08 3JB9-J nrPDB 53 2e-08 6AH0-d nrPDB 53 3e-08 4XQ3-A nrPDB 53 3e-08 6ASO-D nrPDB 53 4e-08 6QX9-66 nrPDB 52 4e-08 4C8Q-A nrPDB 52 6e-08 6QX9-1b nrPDB 51 9e-08 3JB9-I nrPDB 51 1e-07 3JB9-E nrPDB 51 1e-07 3SWN-B nrPDB 50 2e-07 5Z58-f nrPDB 50 3e-07 6QDV-f nrPDB 49 4e-07 5LJ3-g nrPDB 48 9e-07 6AH0-z nrPDB 48 1e-06 1N9R-A nrPDB 46 4e-06 5GM6-g nrPDB 45 6e-06 6J6Q-g nrPDB 45 6e-06 5VSU-F nrPDB 43 3e-05 4C8Q-B nrPDB 43 3e-05 5MQF-a nrPDB 43 4e-05 5VSU-B nrPDB 43 4e-05 4N0A-C nrPDB 42 5e-05 6QX9-62 nrPDB 42 7e-05 6BK8-g nrPDB 41 1e-04 3JB9-G nrPDB 41 1e-04 3JB9-D nrPDB 39 5e-04 4WZJ-C nrPDB 37 0.002 5XJU-A nrPDB 37 0.003 5LQW-b nrPDB 37 0.003 1M5Q-A nrPDB 36 0.004 3JB9-F nrPDB 34 0.016 5GMK-m nrPDB 33 0.020 6ID1-a nrPDB 32 0.060 6QDV-d nrPDB 32 0.092 1D3B-A nrPDB 30 0.16 4XU2-A nrPDB 28 0.91 3SB2-A nrPDB 27 1.5 4NL2-D nrPDB 26 3.4 4EIQ-A nrPDB 26 3.6 5A60-A nrPDB 26 3.9 3HSB-A nrPDB 26 4.7 2KA5-A nrPDB 26 4.9 2FYK-A nrPDB 25 5.8 6ER0-A nrPDB 25 7.2 >6AH0-t nrPDB Length = 91 Score = 130 bits (326), Expect = 2e-31, Method: Composition-based stats. Identities = 91/91 (100%), Positives = 91/91 (100%) Query: 1 MAANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT 60 MAANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT Sbjct: 1 MAANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT 60 Query: 61 PEGRRITKLDQILLNGNNITMLVPGGEGPEV 91 PEGRRITKLDQILLNGNNITMLVPGGEGPEV Sbjct: 61 PEGRRITKLDQILLNGNNITMLVPGGEGPEV 91 >3PGG-A nrPDB Length = 121 Score = 98.2 bits (243), Expect = 7e-22, Method: Composition-based stats. Identities = 44/88 (50%), Positives = 60/88 (68%), Gaps = 12/88 (13%) Query: 12 LLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRIT---- 67 +LPL L+DKCIG+RI++VMK DKE G L GFD++VNMVL+DV E+ + I+ Sbjct: 27 ILPLALIDKCIGNRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQEYGFKADEEDISGGNK 86 Query: 68 --------KLDQILLNGNNITMLVPGGE 87 +L+ ILL+GNN+ MLVPGG+ Sbjct: 87 KLKRVMVNRLETILLSGNNVAMLVPGGD 114 >4EMK-A nrPDB Length = 94 Score = 96.6 bits (239), Expect = 2e-21, Method: Composition-based stats. Identities = 43/79 (54%), Positives = 61/79 (77%), Gaps = 3/79 (3%) Query: 12 LLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQ 71 +LPLEL+DKCIGS + ++MKS++E GTL+GFDD+VN+VL+DVTE++ K + Sbjct: 19 ILPLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEYDTVT--GVTEKHSE 76 Query: 72 ILLNGNNITMLVPGGEGPE 90 +LLNGN + ML+PGG+ PE Sbjct: 77 MLLNGNGMCMLIPGGK-PE 94 >3SWN-A nrPDB Length = 82 Score = 96.6 bits (239), Expect = 2e-21, Method: Composition-based stats. Identities = 43/79 (54%), Positives = 61/79 (77%), Gaps = 3/79 (3%) Query: 12 LLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQ 71 +LPLEL+DKCIGS + ++MKS++E GTL+GFDD+VN+VL+DVTE++ K + Sbjct: 7 ILPLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEYDTVT--GVTEKHSE 64 Query: 72 ILLNGNNITMLVPGGEGPE 90 +LLNGN + ML+PGG+ PE Sbjct: 65 MLLNGNGMCMLIPGGK-PE 82 >4M77-E nrPDB Length = 93 Score = 88.9 bits (219), Expect = 4e-19, Method: Composition-based stats. Identities = 39/82 (47%), Positives = 59/82 (71%), Gaps = 5/82 (6%) Query: 11 QLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGR-----R 65 ++LPLE++DK I ++ IV++S++E GTL+GFDDFVN++LED E+ I PE Sbjct: 5 EILPLEVIDKTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVEWLIDPEDESRNEKV 64 Query: 66 ITKLDQILLNGNNITMLVPGGE 87 + ++LL+GNNI +LVPGG+ Sbjct: 65 MQHHGRMLLSGNNIAILVPGGK 86 >3JCR-3 nrPDB Length = 102 Score = 85.9 bits (211), Expect = 4e-18, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 1/83 (1%) Query: 6 TTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65 TTN + PL+L+ + RI++ M++D+E+ G L +D +NM+L DV E T E Sbjct: 10 TTNTVEE-PLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDE 68 Query: 66 ITKLDQILLNGNNITMLVPGGEG 88 T + NI ML G+G Sbjct: 69 ETYEEIYKSTKRNIPMLFVRGDG 91 >1JBM-A nrPDB Length = 86 Score = 82.4 bits (202), Expect = 4e-17, Method: Composition-based stats. Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Query: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQIL 73 PL+ + + S + I +K D+E G L FD +N+VL D E E +G +L +L Sbjct: 14 PLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELE---DGEVTRRLGTVL 70 Query: 74 LNGNNITMLVPG 85 + G+NI + G Sbjct: 71 IRGDNIVYISRG 82 >4EMH-A nrPDB Length = 105 Score = 80.1 bits (196), Expect = 2e-16, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%) Query: 12 LLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQ 71 +LPL L++ G I + +K+ + G L D+++N+ L +V P+G + +L + Sbjct: 15 MLPLTLLNATQGRPILVELKNGETFNGHLENCDNYMNLTLREV--IRTMPDGDKFFRLPE 72 Query: 72 ILLNGNNITML 82 + GNNI L Sbjct: 73 CYIRGNNIKYL 83 >6ASO-C nrPDB Length = 97 Score = 78.1 bits (191), Expect = 7e-16, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 4/78 (5%) Query: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR----ITKL 69 PL+L+ + R++I ++ + +VGTL FD N+VL D E + Sbjct: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRC 63 Query: 70 DQILLNGNNITMLVPGGE 87 + + + G+ +T++ E Sbjct: 64 EMVFIRGDTVTLISTPSE 81 >6QW6-4e nrPDB Length = 92 Score = 77.4 bits (189), Expect = 1e-15, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 46/77 (59%), Gaps = 6/77 (7%) Query: 11 QLLPLELVDKCIGSR----IHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRI 66 + P+ L+ + + +R + + + + I G ++GFD+++N+VL+D E + R+ Sbjct: 14 MVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRK- 72 Query: 67 TKLDQILLNGNNITMLV 83 +L +I+L G+NIT+L Sbjct: 73 -QLGRIMLKGDNITLLQ 88 >6QDV-e nrPDB Length = 81 Score = 76.6 bits (187), Expect = 2e-15, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 46/77 (59%), Gaps = 6/77 (7%) Query: 11 QLLPLELVDKCIGSR----IHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRI 66 + P+ L+ + + +R + + + + I G ++GFD+++N+VL+D E + R+ Sbjct: 4 MVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRK- 62 Query: 67 TKLDQILLNGNNITMLV 83 +L +I+L G+NIT+L Sbjct: 63 -QLGRIMLKGDNITLLQ 78 >4EMG-A nrPDB Length = 93 Score = 75.1 bits (183), Expect = 7e-15, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 39/82 (47%), Gaps = 10/82 (12%) Query: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITK----- 68 PL+LV + +++ ++ D+E+ G L +D+ +NMVL D E + K Sbjct: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 Query: 69 -----LDQILLNGNNITMLVPG 85 + + + G+++ ++ P Sbjct: 70 TIRKHYEMLFVRGDSVILIAPP 91 >1TH7-A nrPDB Length = 81 Score = 72.4 bits (176), Expect = 5e-14, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 3/68 (4%) Query: 17 LVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNG 76 ++ + + + + + +K +KE+ G L +D +N+VL D E + G+ KL I++ G Sbjct: 13 VLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGK---KLGTIVIRG 69 Query: 77 NNITMLVP 84 +N+ ++ P Sbjct: 70 DNVILISP 77 >3SWN-C nrPDB Length = 117 Score = 71.6 bits (174), Expect = 8e-14, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%) Query: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRIT----KLDQIL 73 + + RI ++I G L GFD +N+VL+DV E PE ++T KL ++ Sbjct: 32 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 91 Query: 74 LNGNNITMLVPGGEGPEV 91 + G + ++ P E+ Sbjct: 92 VRGTTLVLIAPMDGSEEI 109 >1LJO-A nrPDB Length = 77 Score = 71.6 bits (174), Expect = 8e-14, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 45/76 (59%), Gaps = 4/76 (5%) Query: 10 SQLLPLELVDKCIGSRIHIVMKSDK-EIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITK 68 + +LP ++V +G I + MK ++ ++VG L G DD++N+ L + E + ++ Sbjct: 2 AMVLPNQMVKSMVGKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAMECKG---EEKVRS 58 Query: 69 LDQILLNGNNITMLVP 84 L +I+L GNN+ ++ P Sbjct: 59 LGEIVLRGNNVVLIQP 74 >3JB9-H nrPDB Length = 84 Score = 70.1 bits (170), Expect = 2e-13, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 7/77 (9%) Query: 11 QLLPLELVDKCIGSR----IHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRI 66 + P+ + K + I + ++D + G + GFD+F+N+VL+D + + R Sbjct: 9 MIPPINFIFKLLQQHTPVSIWLFEQTDIRLQGQIRGFDEFMNIVLDDAVQVDAKNNKRE- 67 Query: 67 TKLDQILLNGNNITMLV 83 L +ILL G+NIT++ Sbjct: 68 --LGRILLKGDNITLIQ 82 >6QW6-64 nrPDB Length = 139 Score = 63.9 bits (154), Expect = 2e-11, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Query: 12 LLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQ 71 +LPL L+ + + +K+ + G L+ D+++N+ L +V + +G + ++ + Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREV--ICTSRDGDKFWRMPE 58 Query: 72 ILLNGNNITMLVPGGE 87 + G+ I L E Sbjct: 59 CYIRGSTIKYLRIPDE 74 >5GMK-i nrPDB Length = 94 Score = 63.1 bits (152), Expect = 2e-11, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 9/89 (10%) Query: 3 ANATTNPSQLLPLELVDKCIGSR----IHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEF- 57 +N + + P+ + + + I + + I G ++GFD+F+N+V+++ E Sbjct: 2 SNKVKTKAMVPPINCIFNFLQQQTPVTIWLFEQIGIRIKGKIVGFDEFMNVVIDEAVEIP 61 Query: 58 ----EITPEGRRITKLDQILLNGNNITML 82 + + + T L +ILL G+NIT++ Sbjct: 62 VNSADGKEDVEKGTPLGKILLKGDNITLI 90 >1I8F-A nrPDB Length = 81 Score = 61.6 bits (148), Expect = 8e-11, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Query: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGN 77 + IG ++ + ++ EI G L FD VN++LED E + K +++ G Sbjct: 16 LQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEII----DGNVYKRGTMVVRGE 71 Query: 78 NITMLVP 84 N+ + P Sbjct: 72 NVLFISP 78 >6QX9-67 nrPDB Length = 103 Score = 60.8 bits (146), Expect = 1e-10, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 5/72 (6%) Query: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEG-----RRITKLDQI 72 + K I I + + +E G L GFD +N+VL+ E+ P+ +L + Sbjct: 15 LSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLV 74 Query: 73 LLNGNNITMLVP 84 + G ++ ++ P Sbjct: 75 VCRGTSVVLICP 86 >5MKL-A1 nrPDB Length = 87 Score = 57.3 bits (137), Expect = 1e-09, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Query: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQIL 73 PL+ + + + + +K+ +E VG L D +N+VL+D TE+ + K ++L Sbjct: 8 PLKSLKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEYR-EGTSDPVAKYGRVL 66 Query: 74 LNGNNITMLV 83 + G+NI + Sbjct: 67 IRGSNILFIS 76 >5ZWM-s nrPDB Length = 187 Score = 56.2 bits (134), Expect = 3e-09, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 8/79 (10%) Query: 12 LLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEF--------EITPEG 63 +LPL L+ G ++ I +K+ + I G L D+++N+ L +VTE+ E E Sbjct: 1 MLPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAES 60 Query: 64 RRITKLDQILLNGNNITML 82 + KL++I + G I + Sbjct: 61 SKAVKLNEIYIRGTFIKFI 79 >6ASO-G nrPDB Length = 115 Score = 55.8 bits (133), Expect = 4e-09, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 8/74 (10%) Query: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRIT--------KL 69 + K S+I + + K ++G L G+D +N+VL+D E+ P+ T KL Sbjct: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 Query: 70 DQILLNGNNITMLV 83 ++ G + L Sbjct: 90 GLTVIRGTILVSLS 103 >4M75-G nrPDB Length = 122 Score = 54.7 bits (130), Expect = 9e-09, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 8/79 (10%) Query: 12 LLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEF--------EITPEG 63 +LPL L+ G ++ I +K+ + I G L D+++N+ L +VTE+ E E Sbjct: 30 MLPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAES 89 Query: 64 RRITKLDQILLNGNNITML 82 + KL++I + G I + Sbjct: 90 SKAVKLNEIYIRGTFIKFI 108 >4M75-A nrPDB Length = 144 Score = 53.9 bits (128), Expect = 1e-08, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTE--FEITPEGRRITKLDQILLN 75 + + +I ++++ + + G L FD + N++L+D E + ++ Sbjct: 18 IVSSVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIR 77 Query: 76 GNNITML 82 G N+ ML Sbjct: 78 GENVVML 84 >4C8Q-D nrPDB Length = 114 Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 8/79 (10%) Query: 12 LLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEF--------EITPEG 63 +LPL L+ G ++ I +K+ + I G L D+++N+ L +VTE+ E E Sbjct: 1 MLPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAES 60 Query: 64 RRITKLDQILLNGNNITML 82 + KL++I + G I + Sbjct: 61 SKAVKLNEIYIRGTFIKFI 79 >3JB9-J nrPDB Length = 77 Score = 53.5 bits (127), Expect = 2e-08, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 37/65 (56%), Gaps = 3/65 (4%) Query: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGN 77 + K + ++ + + +++ G L G+D F+N+VLED E ++ E K+ + + GN Sbjct: 9 LKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIEEKVDGEK---VKIGSVAIRGN 65 Query: 78 NITML 82 ++ M+ Sbjct: 66 SVIMI 70 >6AH0-d nrPDB Length = 76 Score = 53.1 bits (126), Expect = 3e-08, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 3/65 (4%) Query: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGN 77 + K + ++ + + + + G L GFD F+N+V+++ E + + +++ GN Sbjct: 9 LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE---MATSGQQNNIGMVVIRGN 65 Query: 78 NITML 82 +I ML Sbjct: 66 SIIML 70 >4XQ3-A nrPDB Length = 91 Score = 53.1 bits (126), Expect = 3e-08, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Query: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQIL 73 PL+ + I + + +K E +G L D +N+VL D TE + K ++L Sbjct: 12 PLKSLRTAINRIVLVKLKDGSEYIGKLEQTDGTMNLVLRDCTEIR-EGTSEPVAKYGRVL 70 Query: 74 LNGNNITMLVP 84 + G+NI + Sbjct: 71 IRGSNILFISV 81 >6ASO-D nrPDB Length = 93 Score = 52.7 bits (125), Expect = 4e-08, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 8/79 (10%) Query: 12 LLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEF--------EITPEG 63 +LPL L+ G ++ I +K+ + I G L D+++N+ L +VTE+ E E Sbjct: 1 MLPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAES 60 Query: 64 RRITKLDQILLNGNNITML 82 + KL++I + G I + Sbjct: 61 SKAVKLNEIYIRGTFIKFI 79 >6QX9-66 nrPDB Length = 80 Score = 52.3 bits (124), Expect = 4e-08, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 3/71 (4%) Query: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQIL 73 P + + + IG + + + S + G L D ++N+ LE E+ G+ K Sbjct: 8 PSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEY---VNGQLKNKYGDAF 64 Query: 74 LNGNNITMLVP 84 + GNN+ + Sbjct: 65 IRGNNVLYIST 75 >4C8Q-A nrPDB Length = 101 Score = 52.0 bits (123), Expect = 6e-08, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTE--FEITPEGRRITKLDQILLN 75 + + +I ++++ + + G L FD + N++L+D E + ++ Sbjct: 2 IVSSVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIR 61 Query: 76 GNNITML 82 G N+ ML Sbjct: 62 GENVVML 68 >6QX9-1b nrPDB Length = 240 Score = 51.2 bits (121), Expect = 9e-08, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 7/76 (9%) Query: 22 IGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFE-------ITPEGRRITKLDQILL 74 I R+ +++ + +GT FD +N++L D EF E L +LL Sbjct: 13 IDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKRVLGLVLL 72 Query: 75 NGNNITMLVPGGEGPE 90 G N+ + G P+ Sbjct: 73 RGENLVSMTVEGPPPK 88 >3JB9-I nrPDB Length = 78 Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQIL 73 P + IG + + +K +E GTL D ++N+ L + E +G + L +IL Sbjct: 8 PKPFLQGLIGKPVLVRLKWGQEYKGTLQSVDSYMNLQLLNAEEL---VDGVKTGDLGEIL 64 Query: 74 LNGNNI 79 + NN+ Sbjct: 65 IRCNNV 70 >3JB9-E nrPDB Length = 147 Score = 50.8 bits (120), Expect = 1e-07, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 8/76 (10%) Query: 22 IGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFE--------ITPEGRRITKLDQIL 73 + +++ K + VG LL FD F+N+VL D E+ L ++ Sbjct: 10 LNHSLNVTTKDGRTFVGQLLAFDGFMNLVLSDCQEYRHIKKQNVPSNSVYEEKRMLGLVI 69 Query: 74 LNGNNITMLVPGGEGP 89 L G I L G P Sbjct: 70 LRGEFIVSLSVQGPPP 85 >3SWN-B nrPDB Length = 77 Score = 50.4 bits (119), Expect = 2e-07, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Query: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQIL 73 P E ++K IG ++ I + S + G L D ++N+ LE E+ G++ Sbjct: 7 PNEFLNKVIGKKVLIRLSSGVDYKGILSCLDGYMNLALERTEEY---VNGKKTNVYGDAF 63 Query: 74 LNGNNITMLV 83 + GNN+ + Sbjct: 64 IRGNNVLYVS 73 >5Z58-f nrPDB Length = 86 Score = 49.6 bits (117), Expect = 3e-07, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Query: 11 QLLPLE---LVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRIT 67 LPL ++ G + + +K E G L+ D ++NM L + E+ +G Sbjct: 1 MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEY---IDGALSG 57 Query: 68 KLDQILLNGNNITML 82 L ++L+ NN+ + Sbjct: 58 HLGEVLIRCNNVLYI 72 >6QDV-f nrPDB Length = 72 Score = 49.3 bits (116), Expect = 4e-07, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 3/69 (4%) Query: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQIL 73 P ++ G + + +K E G L+ D ++NM L + E+ +G L ++L Sbjct: 4 PKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEY---IDGALSGHLGEVL 60 Query: 74 LNGNNITML 82 + NN+ + Sbjct: 61 IRCNNVLYI 69 >5LJ3-g nrPDB Length = 77 Score = 48.1 bits (113), Expect = 9e-07, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 32/65 (49%) Query: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGN 77 + K + +I + + +++ G L G+D F+N+VL+D E Q ++ GN Sbjct: 7 LKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEINGEDPANNHQLGLQTVIRGN 66 Query: 78 NITML 82 +I L Sbjct: 67 SIISL 71 >6AH0-z nrPDB Length = 96 Score = 47.7 bits (112), Expect = 1e-06, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTE-FEITPEGRRITKLDQILLNG 76 ++ I + ++ + IVGTL GFD +N++L++ E + +G L ++ G Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVRG 64 Query: 77 NNITML 82 +N+ ++ Sbjct: 65 DNVAVI 70 >1N9R-A nrPDB Length = 93 Score = 45.8 bits (107), Expect = 4e-06, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 4/70 (5%) Query: 14 PLELVDKCIGSRIHIVMK-SDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQI 72 P + + R+ + +K + E GTL+ D++ N+ L + EF L +I Sbjct: 22 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGT---LGEI 78 Query: 73 LLNGNNITML 82 + NN+ + Sbjct: 79 FIRCNNVLYI 88 >5GM6-g nrPDB Length = 94 Score = 45.4 bits (106), Expect = 6e-06, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 41/75 (54%), Gaps = 6/75 (8%) Query: 14 PLELVDKCI--GSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGR----RIT 67 P+ L++ + + + I ++++ +I+ + FD NMVLE+V E +G+ R Sbjct: 16 PMSLINDAMVTRTPVIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRER 75 Query: 68 KLDQILLNGNNITML 82 + ++ L G+++ ++ Sbjct: 76 FISKLFLRGDSVIVV 90 >6J6Q-g nrPDB Length = 110 Score = 45.0 bits (105), Expect = 6e-06, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 41/75 (54%), Gaps = 6/75 (8%) Query: 14 PLELVDKCI--GSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGR----RIT 67 P+ L++ + + + I ++++ +I+ + FD NMVLE+V E +G+ R Sbjct: 30 PMSLINDAMVTRTPVIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRER 89 Query: 68 KLDQILLNGNNITML 82 + ++ L G+++ ++ Sbjct: 90 FISKLFLRGDSVIVV 104 >5VSU-F nrPDB Length = 88 Score = 43.1 bits (100), Expect = 3e-05, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 3/84 (3%) Query: 1 MAANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTE-FEI 59 M+ A+T S + E + IG +++ + S G L D F+N+ L TE +E Sbjct: 3 MSGKASTEGS--VTTEFLSDIIGKTVNVKLASGLLYSGRLESIDGFMNVALSSATEHYES 60 Query: 60 TPEGRRITKLDQILLNGNNITMLV 83 + L G + + Sbjct: 61 NNNKLLNKFNSDVFLRGTQVMYIS 84 >4C8Q-B nrPDB Length = 105 Score = 42.7 bits (99), Expect = 3e-05, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 7/67 (10%) Query: 19 DKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQ---ILLN 75 + + + +K+D EI GTL D F+N+ L+++ + ++ L I + Sbjct: 18 KTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNI----SCTDEKKYPHLGSVRNIFIR 73 Query: 76 GNNITML 82 G+ + + Sbjct: 74 GSTVRYV 80 >5MQF-a nrPDB Length = 118 Score = 42.7 bits (99), Expect = 4e-05, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 40/82 (48%), Gaps = 13/82 (15%) Query: 14 PLELVDKCIGSRIHIVM--KSDKEIVGTLLGFDDFVNMVLEDVTEFEIT----------- 60 PL ++ + + + +++ +++K+++G + FD NMVLE+V E Sbjct: 28 PLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKS 87 Query: 61 PEGRRITKLDQILLNGNNITML 82 + + ++ L G+++ ++ Sbjct: 88 KPVNKDRYISKMFLRGDSVIVV 109 >5VSU-B nrPDB Length = 98 Score = 42.7 bits (99), Expect = 4e-05, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 7/74 (9%) Query: 12 LLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQ 71 +L + + + +K+D EI GTL D F+N+ L+++ + ++ L Sbjct: 4 MLFFSFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNI----SCTDEKKYPHLGS 59 Query: 72 ---ILLNGNNITML 82 I + G+ + + Sbjct: 60 VRNIFIRGSTVRYV 73 >4N0A-C nrPDB Length = 109 Score = 42.3 bits (98), Expect = 5e-05, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 7/74 (9%) Query: 12 LLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQ 71 +L + + + +K+D EI GTL D F+N+ L+++ + ++ L Sbjct: 15 MLFFSFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNI----SCTDEKKYPHLGS 70 Query: 72 ---ILLNGNNITML 82 I + G+ + + Sbjct: 71 VRNIFIRGSTVRYV 84 >6QX9-62 nrPDB Length = 95 Score = 41.6 bits (96), Expect = 7e-05, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 33/77 (42%), Gaps = 3/77 (3%) Query: 12 LLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEG-RRITKLD 70 +L +G + + +K+D I GTL D ++N+ L D++ PE + + Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDIS--VTDPEKYPHMLSVK 58 Query: 71 QILLNGNNITMLVPGGE 87 + G+ + + + Sbjct: 59 NCFIRGSVVRYVQLPAD 75 >6BK8-g nrPDB Length = 101 Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Query: 13 LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQI 72 +P++L+++ G + + + + G L+ +D +N+ L DV T +T +DQI Sbjct: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVI---ATEPQGAVTHMDQI 62 Query: 73 LLNGNNITMLVPG 85 + G+ I +V Sbjct: 63 FVRGSQIKFIVVP 75 >3JB9-G nrPDB Length = 115 Score = 40.8 bits (94), Expect = 1e-04, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 40/83 (48%), Gaps = 12/83 (14%) Query: 14 PLELVDKCIGS--RIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPE--------- 62 PL ++ + + + ++ I +++K+++ + FD NMVLE+V E + Sbjct: 29 PLSVLQQAVKNHDQVLINCRNNKKLLARVKAFDRHSNMVLENVKEMWTEKKRTASGKKGK 88 Query: 63 -GRRITKLDQILLNGNNITMLVP 84 + + ++ L G+ + ++V Sbjct: 89 AINKDRFISKMFLRGDGVVLVVR 111 >3JB9-D nrPDB Length = 97 Score = 38.9 bits (89), Expect = 5e-04, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 37/75 (49%), Gaps = 3/75 (4%) Query: 11 QLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLD 70 L ++L+ + G + + +++ G L+ +D +N + D +T R++ LD Sbjct: 1 MSLCIKLLHETQGHIVTMELENGSTYRGKLIEAEDNMNCQMRD---ISVTARDGRVSHLD 57 Query: 71 QILLNGNNITMLVPG 85 Q+ + G++I L+ Sbjct: 58 QVYIRGSHIRFLIVP 72 >4WZJ-C nrPDB Length = 118 Score = 37.3 bits (85), Expect = 0.002, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 24 SRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLV 83 + I +K+ ++ GT+ G D +N L+ V ++T + R +L+ + + GNNI + Sbjct: 13 ETVTIELKNGTQVHGTITGVDVSMNTHLKAV---KMTLKNREPVQLETLSIRGNNIRYFI 69 Query: 84 PGGEGP 89 P Sbjct: 70 LPDSLP 75 >5XJU-A nrPDB Length = 82 Score = 36.5 bits (83), Expect = 0.003, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 24 SRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLV 83 + I +K+ ++ GT+ G D +N L+ V ++T + R +L+ + + GNNI + Sbjct: 13 ETVTIELKNGTQVHGTITGVDVSMNTHLKAV---KMTLKNREPVQLETLSIRGNNIRYFI 69 Query: 84 PGGEGP 89 P Sbjct: 70 LPDSLP 75 >5LQW-b nrPDB Length = 196 Score = 36.5 bits (83), Expect = 0.003, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 21/39 (53%) Query: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTE 56 + I ++ ++ + + +G L+ FD +N+VL + E Sbjct: 12 LANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIE 50 >1M5Q-A nrPDB Length = 130 Score = 35.8 bits (81), Expect = 0.004, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 25/56 (44%), Gaps = 4/56 (7%) Query: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQIL 73 ++ +G + +V+ + + G L D+ +N+VL + G + ++ + Sbjct: 5 LNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANA----SNKAGEKFNRVFIMY 56 >3JB9-F nrPDB Length = 117 Score = 33.8 bits (76), Expect = 0.016, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 3/72 (4%) Query: 18 VDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGN 77 + K + I +K+ + GT+ D +N L+ V ++T +GR ++ + + GN Sbjct: 7 LMKLTNETVSIELKNGTIVHGTITSVDMQMNTHLKAV---KMTVKGREPVPVETLSIRGN 63 Query: 78 NITMLVPGGEGP 89 NI + P Sbjct: 64 NIRYYILPDSLP 75 >5GMK-m nrPDB Length = 146 Score = 33.5 bits (75), Expect = 0.020, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 5/75 (6%) Query: 15 LELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILL 74 + + K ++ I +K+ + GTL +N +L DV P ++ + Sbjct: 4 VNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 Query: 75 NGNNITMLVPGGEGP 89 + + + GG+ P Sbjct: 64 S-----LYLTGGQQP 73 >6ID1-a nrPDB Length = 126 Score = 31.9 bits (71), Expect = 0.060, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Query: 13 LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQI 72 +P++++ + G + + + G L+ +D +N + ++T +T R+ +L+Q+ Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNIT---VTYRDGRVAQLEQV 61 Query: 73 LLNGNNITMLVPG 85 + G+ I L+ Sbjct: 62 YIRGSKIRFLILP 74 >6QDV-d nrPDB Length = 84 Score = 31.5 bits (70), Expect = 0.092, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Query: 13 LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQI 72 +P++++ + G + + + G L+ +D +N + ++T +T R+ +L+Q+ Sbjct: 4 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNIT---VTYRDGRVAQLEQV 60 Query: 73 LLNGNNITMLVPG 85 + G+ I L+ Sbjct: 61 YIRGSKIRFLILP 73 >1D3B-A nrPDB Length = 75 Score = 30.4 bits (67), Expect = 0.16, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 36/73 (49%), Gaps = 3/73 (4%) Query: 13 LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQI 72 +P++++ + G + + + G L+ +D +N + ++T +T R+ +L+Q+ Sbjct: 5 VPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNIT---VTYRDGRVAQLEQV 61 Query: 73 LLNGNNITMLVPG 85 + G I L+ Sbjct: 62 YIRGCKIRFLILP 74 >4XU2-A nrPDB Length = 270 Score = 28.1 bits (61), Expect = 0.91, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 19/45 (42%) Query: 8 NPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLE 52 NP IGSR+ + + +++VG DD + L+ Sbjct: 209 NPQLAADYRARSLTIGSRVRVELPGGQDVVGIARDIDDQGRLCLD 253 >3SB2-A nrPDB Length = 79 Score = 27.3 bits (59), Expect = 1.5, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 17/36 (47%) Query: 25 RIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT 60 + I + + ++ G + FD +V ++ VT+ Sbjct: 22 PVSIYLVNGIKLQGHVESFDQYVVLLRNTVTQMVYK 57 >4NL2-D nrPDB Length = 77 Score = 26.1 bits (56), Expect = 3.4, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 16/28 (57%), Gaps = 2/28 (7%) Query: 28 IVMKSDKEIVGTLLGFDDFVNMVLEDVT 55 + + + ++ G ++ FD+F VL DV Sbjct: 25 VFLTNGFQLRGRVVSFDNFT--VLLDVE 50 >4EIQ-A nrPDB Length = 549 Score = 26.1 bits (56), Expect = 3.6, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 2/52 (3%) Query: 35 EIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGG 86 E+V + FD + VL D E+ +T ++ L G+ L P G Sbjct: 276 ELVRRAVAFDTEIE-VLSDS-EWHLTHRVADSFSAGRVFLTGDAAHTLSPSG 325 >5A60-A nrPDB Length = 435 Score = 25.8 bits (55), Expect = 3.9, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 32/74 (43%) Query: 9 PSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITK 68 P+++ P + + SR+ + +D L+ DD + D E + I + Sbjct: 101 PTEVWPNGELPADLASRVQPLFSTDFYREKWLVAVDDSRIEIALDQGEVKAGEFAEPICE 160 Query: 69 LDQILLNGNNITML 82 L+ LL+G+ +L Sbjct: 161 LELELLSGDTRAVL 174 >3HSB-A nrPDB Length = 78 Score = 25.8 bits (55), Expect = 4.7, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 20/41 (48%), Gaps = 6/41 (14%) Query: 12 LLPLELVDKCIGSR------IHIVMKSDKEIVGTLLGFDDF 46 + P+ + D+ + + + + + ++ G + GFD+F Sbjct: 6 MKPINIQDQFLNQIRKENTYVTVFLLNGFQLRGQVKGFDNF 46 >2KA5-A nrPDB Length = 125 Score = 25.8 bits (55), Expect = 4.9, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 7/56 (12%) Query: 43 FDDFVN-------MVLEDVTEFEITPEGRRITKLDQILLNGNNITMLVPGGEGPEV 91 FD+F+N +VL DV + G + L I +G ++ P + V Sbjct: 44 FDEFLNKGYNKIFLVLSDVESIDSFSLGVIVNILKSISSSGGFFALVSPNEKVERV 99 >2FYK-A nrPDB Length = 235 Score = 25.4 bits (54), Expect = 5.8, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 3/66 (4%) Query: 4 NATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLE-DVTEFEITPE 62 N NP +L LV + + + + D G DDF +++ D E + Sbjct: 170 NFLKNPMDIL--NLVRDNMILGVRVKILGDGSFEGIAEDIDDFGRLIIRLDSGEVKKVIY 227 Query: 63 GRRITK 68 G + Sbjct: 228 GDVSLR 233 >6ER0-A nrPDB Length = 127 Score = 25.0 bits (53), Expect = 7.2, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 25/55 (45%) Query: 15 LELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKL 69 LE + +++ +++ D+E G LL D +V D+ E R + KL Sbjct: 70 LEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKL 124 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.137 0.352 Lambda K H 0.267 0.0423 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,240,994 Number of Sequences: 36641 Number of extensions: 103161 Number of successful extensions: 382 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 241 Number of HSP's gapped (non-prelim): 122 length of query: 91 length of database: 10,336,785 effective HSP length: 60 effective length of query: 31 effective length of database: 8,138,325 effective search space: 252288075 effective search space used: 252288075 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 52 (24.6 bits)