BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P62137 (330 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3V4Y-A nrPDB 622 e-179 1S70-A nrPDB 600 e-172 5JPE-A nrPDB 408 e-114 5W0W-C nrPDB 294 3e-80 5JJT-A nrPDB 226 1e-59 4ORB-A nrPDB 225 2e-59 4IL1-A nrPDB 224 3e-59 4ORC-A nrPDB 223 6e-59 4JA9-A nrPDB 213 1e-55 4ZVZ-A nrPDB 212 2e-55 3ICF-A nrPDB 195 2e-50 1G5B-A nrPDB 43 2e-04 2DFJ-A nrPDB 41 7e-04 5VJW-A nrPDB 36 0.020 1V73-A nrPDB 32 0.48 2EX6-A nrPDB 30 1.1 5AK7-A nrPDB 30 1.2 2R8P-A nrPDB 29 2.2 3RHO-A nrPDB 27 9.7 3IC9-A nrPDB 27 10.0 >3V4Y-A nrPDB Length = 306 Score = 622 bits (1604), Expect = e-179, Method: Compositional matrix adjust. Identities = 300/301 (99%), Positives = 301/301 (100%) Query: 7 LNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH 66 LNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH Sbjct: 6 LNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH 65 Query: 67 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHE 126 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKI+YPENFFLLRGNHE Sbjct: 66 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125 Query: 127 CASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 186 CASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI Sbjct: 126 CASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 185 Query: 187 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 246 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR Sbjct: 186 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 245 Query: 247 AHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKY 306 AHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKY Sbjct: 246 AHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKY 305 Query: 307 G 307 G Sbjct: 306 G 306 >1S70-A nrPDB Length = 330 Score = 600 bits (1547), Expect = e-172, Method: Compositional matrix adjust. Identities = 292/330 (88%), Positives = 311/330 (94%), Gaps = 4/330 (1%) Query: 1 MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 60 M+D E LN+DS+I RLLEV+G RPGK VQ+TE E+RGLC+KSREIFLSQPILLELEAPLK Sbjct: 4 MADGE-LNVDSLITRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLK 62 Query: 61 ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFL 120 ICGDIHGQY DLLRLFEYGGFPPE+NYLFLGDYVDRGKQSLETICLLLAYKI+YPENFFL Sbjct: 63 ICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 122 Query: 121 LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 180 LRGNHECASINRIYGFYDECKRR+NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL Sbjct: 123 LRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 182 Query: 181 QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 240 QSMEQIRRIMRPTDVPD GLLCDLLWSDPDKDVQGWGENDRGVSFTFGA+VV+KFL++HD Sbjct: 183 QSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHD 242 Query: 241 LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 300 LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG MMSVDETLMCSFQILKP++ Sbjct: 243 LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSE 302 Query: 301 KNKGKYGQFSGLNPGGRPITPPRNSAKAKK 330 K K KY Q+ GLN GRP+TPPR + KK Sbjct: 303 K-KAKY-QYGGLN-SGRPVTPPRTANPPKK 329 >5JPE-A nrPDB Length = 311 Score = 408 bits (1048), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/295 (65%), Positives = 229/295 (77%), Gaps = 1/295 (0%) Query: 7 LNLDSIIGRLLEVQGS-RPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDI 65 +++DS+I +LL S + KNV L EI +C +REIFLSQP LLEL P+K+ GD+ Sbjct: 4 IDIDSLIDKLLNAGFSGKRTKNVCLKNTEIELICASAREIFLSQPSLLELAPPVKVVGDV 63 Query: 66 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNH 125 HGQY+DL+R+F GFPP++NYLFLGDYV+RGKQSLETI LLL YKI+YPENFFLLRGNH Sbjct: 64 HGQYHDLIRIFSKCGFPPKTNYLFLGDYVNRGKQSLETILLLLCYKIKYPENFFLLRGNH 123 Query: 126 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQ 185 ECA++ R+YGFYDECKRR NIK WK F D FN LPIAAIV KIFC HGGLSP L SM++ Sbjct: 124 ECANVTRVYGFYDECKRRCNIKTWKLFIDTFNTLPIAAIVAGKIFCVHGGLSPVLNSMDE 183 Query: 186 IRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLIC 245 IR I RPTDVPD GLL DLLWSDP + W +N+RGVS+ F + KFL K + DL+C Sbjct: 184 IRNIARPTDVPDFGLLNDLLWSDPADTINEWEDNERGVSYVFSKVAINKFLSKFNFDLVC 243 Query: 246 RAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 300 RAH VVEDGYEFF R LVT+FSAPNYCGEFDN GA+M V E L+CSF++L P D Sbjct: 244 RAHMVVEDGYEFFNDRTLVTVFSAPNYCGEFDNWGAVMGVSEDLLCSFELLDPLD 298 >5W0W-C nrPDB Length = 311 Score = 294 bits (753), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 136/274 (49%), Positives = 191/274 (69%), Gaps = 2/274 (0%) Query: 29 QLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 88 QL+E++++ LC K++EI + + E+ P+ +CGD+HGQ++DL+ LF GG P++NYL Sbjct: 24 QLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYL 83 Query: 89 FLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRY-NIK 147 F+GDYVDRG S+ET+ LL+A K+RY E +LRGNHE I ++YGFYDEC R+Y N Sbjct: 84 FMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNAN 143 Query: 148 LWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWS 207 +WK FTD F+ LP+ A+VD +IFC HGGLSP + +++ IR + R +VP +G +CDLLWS Sbjct: 144 VWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWS 203 Query: 208 DPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLF 267 DPD D GWG + RG +TFG ++ F H + L L+ RAHQ+V +GY + R +VT+F Sbjct: 204 DPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIF 262 Query: 268 SAPNYCGEFDNAGAMMSVDETLMCSFQILKPADK 301 SAPNYC N A+M +D+TL SF PA + Sbjct: 263 SAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPR 296 >5JJT-A nrPDB Length = 479 Score = 226 bits (575), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 111/252 (44%), Positives = 164/252 (65%), Gaps = 7/252 (2%) Query: 38 LCLKSREIFLSQPILLELEAP----LKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGD 92 + L++R+I L+ P L+++ P + +CGD+HGQ+YDLL +FE G P E N YLF GD Sbjct: 194 IVLQTRQILLALPSLVDISVPHGKHITVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGD 253 Query: 93 YVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTF 152 +VDRG S+E I L A+K P + +L RGNHE S+N+IYGF E + + + K F Sbjct: 254 FVDRGSFSVEIILTLFAFKCMCPSSIYLARGNHESKSMNKIYGFEGEVRSKLSEKFVDLF 313 Query: 153 TDCFNCLPIAAIVDEKIFCCHGGL-SPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK 211 + F LP+A +++ K+F HGGL S D + IR I R + P++GL+C+LLWSDP + Sbjct: 314 AEVFCYLPLAHVINGKVFVVHGGLFSVDGVKLSDIRAIDRFCEPPEEGLMCELLWSDP-Q 372 Query: 212 DVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPN 271 + G G + RGV +FG +V +FL ++LDL+ R+H+V ++GYE +L+T+FSAPN Sbjct: 373 PLPGRGPSKRGVGLSFGGDVTKRFLQDNNLDLLVRSHEVKDEGYEVEHDGKLITVFSAPN 432 Query: 272 YCGEFDNAGAMM 283 YC + N GA + Sbjct: 433 YCDQMGNKGAFI 444 >4ORB-A nrPDB Length = 519 Score = 225 bits (573), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 110/278 (39%), Positives = 170/278 (61%), Gaps = 13/278 (4%) Query: 26 KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 85 K +L E+ + + I + LL+++AP+ +CGDIHGQ++DL++LFE GG P + Sbjct: 52 KEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 111 Query: 86 NYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRYN 145 YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC + + F ECK +Y+ Sbjct: 112 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 171 Query: 146 IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 205 +++ D F+CLP+AA+++++ C HGGLSP++ +++ IR++ R + P G +CD+L Sbjct: 172 ERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 231 Query: 206 WSDP------DKDVQGWGEND-RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 258 WSDP +K + + N RG S+ + V FL ++L I RAH+ + GY + Sbjct: 232 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCDFLQHNNLLSILRAHEAQDAGYRMY 291 Query: 259 AKRQ------LVTLFSAPNYCGEFDNAGAMMSVDETLM 290 K Q L+T+FSAPNY ++N A++ + +M Sbjct: 292 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 329 >4IL1-A nrPDB Length = 823 Score = 224 bits (572), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 110/278 (39%), Positives = 170/278 (61%), Gaps = 13/278 (4%) Query: 26 KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 85 K +L E+ + + I + LL+++AP+ +CGDIHGQ++DL++LFE GG P + Sbjct: 385 KEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 444 Query: 86 NYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRYN 145 YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC + + F ECK +Y+ Sbjct: 445 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 504 Query: 146 IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 205 +++ D F+CLP+AA+++++ C HGGLSP++ +++ IR++ R + P G +CD+L Sbjct: 505 ERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 564 Query: 206 WSDP------DKDVQGWGEND-RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 258 WSDP +K + + N RG S+ + V FL ++L I RAH+ + GY + Sbjct: 565 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCDFLQHNNLLSILRAHEAQDAGYRMY 624 Query: 259 AKRQ------LVTLFSAPNYCGEFDNAGAMMSVDETLM 290 K Q L+T+FSAPNY ++N A++ + +M Sbjct: 625 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 662 >4ORC-A nrPDB Length = 544 Score = 223 bits (569), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 106/259 (40%), Positives = 162/259 (62%), Gaps = 13/259 (5%) Query: 45 IFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETI 104 I + ++E+EAP+ +CGDIHGQ++DL++LFE GG P + YLFLGDYVDRG S+E + Sbjct: 100 ILRREKTMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECV 159 Query: 105 CLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAI 164 L KI YP FLLRGNHEC + + F ECK +Y+ ++++ + F+ LP+AA+ Sbjct: 160 LYLWVLKILYPSTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFDSLPLAAL 219 Query: 165 VDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDV------QGWGE 218 ++++ C HGGLSP++ +++ IRR+ R + P G +CDLLWSDP +D + + Sbjct: 220 LNQQFLCVHGGLSPEIHTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSH 279 Query: 219 ND-RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQ------LVTLFSAPN 271 N RG S+ + V +FL ++L I RAH+ + GY + K Q L+T+FSAPN Sbjct: 280 NTVRGCSYFYNYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPN 339 Query: 272 YCGEFDNAGAMMSVDETLM 290 Y ++N A++ + +M Sbjct: 340 YLDVYNNKAAVLKYENNVM 358 >4JA9-A nrPDB Length = 488 Score = 213 bits (541), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 107/241 (44%), Positives = 152/241 (63%), Gaps = 4/241 (1%) Query: 47 LSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGDYVDRGKQSLETIC 105 L + L E E + +CGD HGQ+YDLL +FE G P E+N Y+F GD+VDRG S+E I Sbjct: 215 LVETTLKETEK-ITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVIL 273 Query: 106 LLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIV 165 L +K+ YP++F LLRGNHE ++N+IYGF E K +Y ++++ F++ F LP+A + Sbjct: 274 TLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCI 333 Query: 166 DEKIFCCHGGL-SPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVS 224 + K+ HGGL S D +++ IR+I R PD G +CDLLWSDP G + RGVS Sbjct: 334 NGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQ-NGRSVSKRGVS 392 Query: 225 FTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMS 284 FG +V FL ++ LD I R+H+V +GYE + VT+FSAPNYC + N + + Sbjct: 393 CQFGPDVTKAFLEENQLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIH 452 Query: 285 V 285 + Sbjct: 453 L 453 >4ZVZ-A nrPDB Length = 333 Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 107/241 (44%), Positives = 153/241 (63%), Gaps = 4/241 (1%) Query: 47 LSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGDYVDRGKQSLETIC 105 L + L E E + +CGD HGQ+YDLL +FE G P E+N Y+F GD+VDRG S+E I Sbjct: 60 LVETTLKETEK-ITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVIL 118 Query: 106 LLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIV 165 L +K+ YP++F LLRGNHE ++N+IYGF E K +Y ++++ F++ F LP+A + Sbjct: 119 TLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKYTAQMYELFSEVFEWLPLAQCI 178 Query: 166 DEKIFCCHGGL-SPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVS 224 + K+ HGGL S D +++ IR+I R PD G +CDLLWSDP G + RGVS Sbjct: 179 NGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQ-NGRSISKRGVS 237 Query: 225 FTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMS 284 FG +V FL +++LD I R+H+V +GYE + VT+FSAPNYC + N + + Sbjct: 238 CQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHGGRCVTVFSAPNYCDQMGNKASYIH 297 Query: 285 V 285 + Sbjct: 298 L 298 >3ICF-A nrPDB Length = 335 Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 102/271 (37%), Positives = 152/271 (56%), Gaps = 15/271 (5%) Query: 26 KNVQLTENEIRGLCLKSREIFLSQPILLELE------APLKICGDIHGQYYDLLRLF-EY 78 K L + + + + +F +P ++ELE + +CGD HGQ+YD+L LF ++ Sbjct: 27 KGKYLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNLFRKF 86 Query: 79 GGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYD 138 G P+ YLF GD+VDRG S E L KI +P NFFL RGNHE ++N+IYGF D Sbjct: 87 GKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFED 146 Query: 139 ECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPD----LQSMEQIRRIMRPTD 194 ECK +Y+ +++ F F LP+A +++ HGGL D L + I R +P Sbjct: 147 ECKYKYSQRIFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQP-- 204 Query: 195 VPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDG 254 P G +LLW+DP ++ G G + RG+ FG ++ +FL + L I R+H++ G Sbjct: 205 -PRDGAFMELLWADP-QEANGMGPSQRGLGHAFGPDITDRFLRNNKLRKIFRSHELRMGG 262 Query: 255 YEFFAKRQLVTLFSAPNYCGEFDNAGAMMSV 285 +F K +L+T+FSAPNYC N G ++ V Sbjct: 263 VQFEQKGKLMTVFSAPNYCDSQGNLGGVIHV 293 >1G5B-A nrPDB Length = 221 Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 14/90 (15%) Query: 61 ICGDIHGQYYDLLRLFEYGGFPPESNYLF-LGDYVDRGKQSLETICLLLAYKIRYPENFF 119 + GD+HG Y +L+ + GF + + L +GD VDRG +++E CL L I +P F Sbjct: 17 VVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVE--CLEL---ITFPW-FR 70 Query: 120 LLRGNHECASINRIYGFYDECKRRYNIKLW 149 +RGNHE I D R N+ W Sbjct: 71 AVRGNHEQMMI-------DGLSERGNVNHW 93 >2DFJ-A nrPDB Length = 280 Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 13/137 (9%) Query: 61 ICGDIHGQYYDLLRLFEYGGFPPESNYLFL-GDYVDRGKQSLETICLLLAYKIRYPENFF 119 + GD+HG Y +L+ L F P + L+L GD V RG SL+ +L Y ++ Sbjct: 5 LIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLD----VLRYVKSLGDSVR 60 Query: 120 LLRGNHECASINRIYGFY-DECKRRYNIKLWKTFTD-CFNCL---PIAAIVDE-KIFCCH 173 L+ GNH+ + G ++ K R L D N L P+ I +E K+ H Sbjct: 61 LVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAH 120 Query: 174 GGLSP--DLQSMEQIRR 188 G++P DLQ+ ++ R Sbjct: 121 AGITPQWDLQTAKECAR 137 >5VJW-A nrPDB Length = 309 Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 8/76 (10%) Query: 61 IC-GDIHGQYYDL--LRLFEYGGFPPE----SNYLFLGDYVDRGKQSLETICLLLAYKIR 113 IC GDIHG L L L P + +FLGDY DRG ++ + I L++ + Sbjct: 9 ICVGDIHGYISKLNNLWLNLQSAIDPSDFSSALVIFLGDYCDRGPETRKVIDFLISLPEK 68 Query: 114 YP-ENFFLLRGNHECA 128 +P + L GNH+ A Sbjct: 69 HPDQTHVFLAGNHDFA 84 >1V73-A nrPDB Length = 342 Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 58/144 (40%), Gaps = 26/144 (18%) Query: 64 DIHGQYYDLLRLFEY-------GGFP-PESNYLFLGDYVDRGKQSLETICLLLAYKIRYP 115 D+HGQY LL L + G + E + + GD DRG Q E + + + Sbjct: 78 DVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQAR 137 Query: 116 EN---FFLLRGNHE----CASINRIYGFYDEC----KRRYNIKLWKTFTDCFNCL----P 160 + LL GNHE + ++ YD R YN KL+ T+ L Sbjct: 138 DAGGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRPYN-KLYGADTEIGQWLRSKNT 196 Query: 161 IAAIVDEKIFCCHGGLSPDLQSME 184 I I D + HGG+S + S E Sbjct: 197 IIKIND--VLYMHGGISSEWISRE 218 >2EX6-A nrPDB Length = 458 Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust. Identities = 15/39 (38%), Positives = 17/39 (43%) Query: 149 WKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIR 187 W T CF+ P AAIVD F +P M IR Sbjct: 134 WNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIR 172 >5AK7-A nrPDB Length = 438 Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 9/80 (11%) Query: 243 LICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQI-----LK 297 L CR H+V + GY + ++ + P+Y E D + + C ++I K Sbjct: 303 LHCRTHEVADKGYLYIKHYPILGEQAGPDYKIEADVVSCANATISPVQCYYRINGSGSFK 362 Query: 298 PAD---KNKGKYG-QFSGLN 313 AD ++ G Y F+GLN Sbjct: 363 AADMTMESTGHYTYSFTGLN 382 >2R8P-A nrPDB Length = 669 Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 8/91 (8%) Query: 210 DKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQL-----V 264 D V+GW +D + F V + + HD I RA VE+ K L + Sbjct: 190 DGHVEGWFTDDTAMRFEAYGWHVIRDIDGHDAASIKRA---VEEARAVTDKPSLLMCKTI 246 Query: 265 TLFSAPNYCGEFDNAGAMMSVDETLMCSFQI 295 F +PN G D+ GA + E + Q+ Sbjct: 247 IGFGSPNKAGTHDSHGAPLGDAEIALTREQL 277 >3RHO-A nrPDB Length = 517 Score = 27.3 bits (59), Expect = 9.7, Method: Compositional matrix adjust. Identities = 11/30 (36%), Positives = 18/30 (60%) Query: 10 DSIIGRLLEVQGSRPGKNVQLTENEIRGLC 39 D I G + + +RP +N+ LT+ E G+C Sbjct: 153 DKIQGATIPINQARPNRNLTLTKKEPVGVC 182 >3IC9-A nrPDB Length = 492 Score = 27.3 bits (59), Expect = 10.0, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 15/79 (18%) Query: 211 KDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAP 270 + V+ + E D+ F AKFL +H L V+D + AKR ++ S P Sbjct: 104 ESVESFDEQDKIRGF-------AKFLDEHTLQ--------VDDHSQVIAKRIVIATGSRP 148 Query: 271 NYCGEFDNAGAMMSVDETL 289 NY AG+ + ++ L Sbjct: 149 NYPEFLAAAGSRLLTNDNL 167 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1S70-A nrPDB 541 e-154 3V4Y-A nrPDB 519 e-148 5JPE-A nrPDB 452 e-128 5W0W-C nrPDB 409 e-115 4ORB-A nrPDB 385 e-107 4IL1-A nrPDB 385 e-107 4ORC-A nrPDB 383 e-107 5JJT-A nrPDB 361 e-100 4ZVZ-A nrPDB 355 1e-98 4JA9-A nrPDB 355 1e-98 3ICF-A nrPDB 349 1e-96 2DFJ-A nrPDB 133 1e-31 1G5B-A nrPDB 91 7e-19 Sequences not found previously or not previously below threshold: 1V73-A nrPDB 57 9e-09 2QJC-A nrPDB 50 2e-06 5VJW-A nrPDB 43 2e-04 4AZV-A nrPDB 32 0.42 1KAN-A nrPDB 30 1.5 4AZW-A nrPDB 29 2.5 3HVN-A nrPDB 29 3.4 5GZ5-A nrPDB 28 5.2 >1S70-A nrPDB Length = 330 Score = 541 bits (1394), Expect = e-154, Method: Composition-based stats. Identities = 292/330 (88%), Positives = 311/330 (94%), Gaps = 4/330 (1%) Query: 1 MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 60 M+D E LN+DS+I RLLEV+G RPGK VQ+TE E+RGLC+KSREIFLSQPILLELEAPLK Sbjct: 4 MADGE-LNVDSLITRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLK 62 Query: 61 ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFL 120 ICGDIHGQY DLLRLFEYGGFPPE+NYLFLGDYVDRGKQSLETICLLLAYKI+YPENFFL Sbjct: 63 ICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFL 122 Query: 121 LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 180 LRGNHECASINRIYGFYDECKRR+NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL Sbjct: 123 LRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 182 Query: 181 QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHD 240 QSMEQIRRIMRPTDVPD GLLCDLLWSDPDKDVQGWGENDRGVSFTFGA+VV+KFL++HD Sbjct: 183 QSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHD 242 Query: 241 LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 300 LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG MMSVDETLMCSFQILKP++ Sbjct: 243 LDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSE 302 Query: 301 KNKGKYGQFSGLNPGGRPITPPRNSAKAKK 330 K K KY Q+ GLN GRP+TPPR + KK Sbjct: 303 K-KAKY-QYGGLN-SGRPVTPPRTANPPKK 329 >3V4Y-A nrPDB Length = 306 Score = 519 bits (1337), Expect = e-148, Method: Composition-based stats. Identities = 300/301 (99%), Positives = 301/301 (100%) Query: 7 LNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH 66 LNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH Sbjct: 6 LNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIH 65 Query: 67 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHE 126 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKI+YPENFFLLRGNHE Sbjct: 66 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 125 Query: 127 CASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 186 CASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI Sbjct: 126 CASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 185 Query: 187 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 246 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR Sbjct: 186 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 245 Query: 247 AHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKY 306 AHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKY Sbjct: 246 AHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKNKGKY 305 Query: 307 G 307 G Sbjct: 306 G 306 >5JPE-A nrPDB Length = 311 Score = 452 bits (1164), Expect = e-128, Method: Composition-based stats. Identities = 194/298 (65%), Positives = 229/298 (76%), Gaps = 1/298 (0%) Query: 4 SEKLNLDSIIGRLLEVQGS-RPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKIC 62 +++DS+I +LL S + KNV L EI +C +REIFLSQP LLEL P+K+ Sbjct: 1 GHMIDIDSLIDKLLNAGFSGKRTKNVCLKNTEIELICASAREIFLSQPSLLELAPPVKVV 60 Query: 63 GDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLR 122 GD+HGQY+DL+R+F GFPP++NYLFLGDYV+RGKQSLETI LLL YKI+YPENFFLLR Sbjct: 61 GDVHGQYHDLIRIFSKCGFPPKTNYLFLGDYVNRGKQSLETILLLLCYKIKYPENFFLLR 120 Query: 123 GNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQS 182 GNHECA++ R+YGFYDECKRR NIK WK F D FN LPIAAIV KIFC HGGLSP L S Sbjct: 121 GNHECANVTRVYGFYDECKRRCNIKTWKLFIDTFNTLPIAAIVAGKIFCVHGGLSPVLNS 180 Query: 183 MEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLD 242 M++IR I RPTDVPD GLL DLLWSDP + W +N+RGVS+ F + KFL K + D Sbjct: 181 MDEIRNIARPTDVPDFGLLNDLLWSDPADTINEWEDNERGVSYVFSKVAINKFLSKFNFD 240 Query: 243 LICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 300 L+CRAH VVEDGYEFF R LVT+FSAPNYCGEFDN GA+M V E L+CSF++L P D Sbjct: 241 LVCRAHMVVEDGYEFFNDRTLVTVFSAPNYCGEFDNWGAVMGVSEDLLCSFELLDPLD 298 >5W0W-C nrPDB Length = 311 Score = 409 bits (1051), Expect = e-115, Method: Composition-based stats. Identities = 136/275 (49%), Positives = 191/275 (69%), Gaps = 2/275 (0%) Query: 28 VQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNY 87 QL+E++++ LC K++EI + + E+ P+ +CGD+HGQ++DL+ LF GG P++NY Sbjct: 23 KQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNY 82 Query: 88 LFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRY-NI 146 LF+GDYVDRG S+ET+ LL+A K+RY E +LRGNHE I ++YGFYDEC R+Y N Sbjct: 83 LFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGFYDECLRKYGNA 142 Query: 147 KLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLW 206 +WK FTD F+ LP+ A+VD +IFC HGGLSP + +++ IR + R +VP +G +CDLLW Sbjct: 143 NVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLW 202 Query: 207 SDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTL 266 SDPD D GWG + RG +TFG ++ F H + L L+ RAHQ+V +GY + R +VT+ Sbjct: 203 SDPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTI 261 Query: 267 FSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADK 301 FSAPNYC N A+M +D+TL SF PA + Sbjct: 262 FSAPNYCYRCGNQAAIMELDDTLKYSFLQFDPAPR 296 >4ORB-A nrPDB Length = 519 Score = 385 bits (990), Expect = e-107, Method: Composition-based stats. Identities = 110/278 (39%), Positives = 170/278 (61%), Gaps = 13/278 (4%) Query: 26 KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 85 K +L E+ + + I + LL+++AP+ +CGDIHGQ++DL++LFE GG P + Sbjct: 52 KEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 111 Query: 86 NYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRYN 145 YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC + + F ECK +Y+ Sbjct: 112 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 171 Query: 146 IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 205 +++ D F+CLP+AA+++++ C HGGLSP++ +++ IR++ R + P G +CD+L Sbjct: 172 ERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 231 Query: 206 WSDP------DKDVQGWGEND-RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 258 WSDP +K + + N RG S+ + V FL ++L I RAH+ + GY + Sbjct: 232 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCDFLQHNNLLSILRAHEAQDAGYRMY 291 Query: 259 AKRQ------LVTLFSAPNYCGEFDNAGAMMSVDETLM 290 K Q L+T+FSAPNY ++N A++ + +M Sbjct: 292 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 329 >4IL1-A nrPDB Length = 823 Score = 385 bits (990), Expect = e-107, Method: Composition-based stats. Identities = 110/278 (39%), Positives = 170/278 (61%), Gaps = 13/278 (4%) Query: 26 KNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 85 K +L E+ + + I + LL+++AP+ +CGDIHGQ++DL++LFE GG P + Sbjct: 385 KEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGSPANT 444 Query: 86 NYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRYN 145 YLFLGDYVDRG S+E + L A KI YP+ FLLRGNHEC + + F ECK +Y+ Sbjct: 445 RYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS 504 Query: 146 IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLL 205 +++ D F+CLP+AA+++++ C HGGLSP++ +++ IR++ R + P G +CD+L Sbjct: 505 ERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDIL 564 Query: 206 WSDP------DKDVQGWGEND-RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFF 258 WSDP +K + + N RG S+ + V FL ++L I RAH+ + GY + Sbjct: 565 WSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCDFLQHNNLLSILRAHEAQDAGYRMY 624 Query: 259 AKRQ------LVTLFSAPNYCGEFDNAGAMMSVDETLM 290 K Q L+T+FSAPNY ++N A++ + +M Sbjct: 625 RKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM 662 >4ORC-A nrPDB Length = 544 Score = 383 bits (984), Expect = e-107, Method: Composition-based stats. Identities = 113/303 (37%), Positives = 179/303 (59%), Gaps = 15/303 (4%) Query: 1 MSDSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLK 60 ++ E +LD I ++V + K ++ E + + I + ++E+EAP+ Sbjct: 58 LTSEEVFDLDGI--PRVDVLKNHLVKEGRVDEEIALRIINEGAAILRREKTMIEVEAPIT 115 Query: 61 ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFL 120 +CGDIHGQ++DL++LFE GG P + YLFLGDYVDRG S+E + L KI YP FL Sbjct: 116 VCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLWVLKILYPSTLFL 175 Query: 121 LRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDL 180 LRGNHEC + + F ECK +Y+ ++++ + F+ LP+AA+++++ C HGGLSP++ Sbjct: 176 LRGNHECRHLTEYFTFKQECKIKYSERVYEACMEAFDSLPLAALLNQQFLCVHGGLSPEI 235 Query: 181 QSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDV------QGWGEND-RGVSFTFGAEVVA 233 +++ IRR+ R + P G +CDLLWSDP +D + + N RG S+ + V Sbjct: 236 HTLDDIRRLDRFKEPPAFGPMCDLLWSDPSEDFGNEKSQEHFSHNTVRGCSYFYNYPAVC 295 Query: 234 KFLHKHDLDLICRAHQVVEDGYEFFAKRQ------LVTLFSAPNYCGEFDNAGAMMSVDE 287 +FL ++L I RAH+ + GY + K Q L+T+FSAPNY ++N A++ + Sbjct: 296 EFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYEN 355 Query: 288 TLM 290 +M Sbjct: 356 NVM 358 >5JJT-A nrPDB Length = 479 Score = 361 bits (926), Expect = e-100, Method: Composition-based stats. Identities = 115/290 (39%), Positives = 178/290 (61%), Gaps = 12/290 (4%) Query: 3 DSEKLNLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAP---- 58 + E++ LD + + + + + L + + L++R+I L+ P L+++ P Sbjct: 164 EGEEVTLDFVKTMMEDFKNQK-----TLHKRYAYQIVLQTRQILLALPSLVDISVPHGKH 218 Query: 59 LKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGDYVDRGKQSLETICLLLAYKIRYPEN 117 + +CGD+HGQ+YDLL +FE G P E N YLF GD+VDRG S+E I L A+K P + Sbjct: 219 ITVCGDVHGQFYDLLNIFELNGLPSEENPYLFNGDFVDRGSFSVEIILTLFAFKCMCPSS 278 Query: 118 FFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGL- 176 +L RGNHE S+N+IYGF E + + + K F + F LP+A +++ K+F HGGL Sbjct: 279 IYLARGNHESKSMNKIYGFEGEVRSKLSEKFVDLFAEVFCYLPLAHVINGKVFVVHGGLF 338 Query: 177 SPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFL 236 S D + IR I R + P++GL+C+LLWSDP + + G G + RGV +FG +V +FL Sbjct: 339 SVDGVKLSDIRAIDRFCEPPEEGLMCELLWSDP-QPLPGRGPSKRGVGLSFGGDVTKRFL 397 Query: 237 HKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVD 286 ++LDL+ R+H+V ++GYE +L+T+FSAPNYC + N GA + + Sbjct: 398 QDNNLDLLVRSHEVKDEGYEVEHDGKLITVFSAPNYCDQMGNKGAFIRFE 447 >4ZVZ-A nrPDB Length = 333 Score = 355 bits (912), Expect = 1e-98, Method: Composition-based stats. Identities = 110/291 (37%), Positives = 165/291 (56%), Gaps = 8/291 (2%) Query: 27 NVQLTENEIRGLCLKSREIFLSQPILLELEAP----LKICGDIHGQYYDLLRLFEYGGFP 82 +L + ++ +E+ L+E + +CGD HGQ+YDLL +FE G P Sbjct: 35 QKKLHRKCAYQILVQVKEVLSKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLP 94 Query: 83 PESN-YLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECK 141 E+N Y+F GD+VDRG S+E I L +K+ YP++F LLRGNHE ++N+IYGF E K Sbjct: 95 SETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVK 154 Query: 142 RRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGL-SPDLQSMEQIRRIMRPTDVPDQGL 200 +Y ++++ F++ F LP+A ++ K+ HGGL S D +++ IR+I R PD G Sbjct: 155 AKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGP 214 Query: 201 LCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAK 260 +CDLLWSDP + G + RGVS FG +V FL +++LD I R+H+V +GYE Sbjct: 215 MCDLLWSDP-QPQNGRSISKRGVSCQFGPDVTKAFLEENNLDYIIRSHEVKAEGYEVAHG 273 Query: 261 RQLVTLFSAPNYCGEFDNAGAMMSVD-ETLMCSFQILKPADKNKGKYGQFS 310 + VT+FSAPNYC + N + + + L F K ++ Sbjct: 274 GRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNVKPMAYA 324 >4JA9-A nrPDB Length = 488 Score = 355 bits (912), Expect = 1e-98, Method: Composition-based stats. Identities = 110/291 (37%), Positives = 164/291 (56%), Gaps = 8/291 (2%) Query: 27 NVQLTENEIRGLCLKSREIFLSQPILLELEAP----LKICGDIHGQYYDLLRLFEYGGFP 82 +L + ++ +E+ L+E + +CGD HGQ+YDLL +FE G P Sbjct: 190 QKKLHRKCAYQILVQVKEVLCKLSTLVETTLKETEKITVCGDTHGQFYDLLNIFELNGLP 249 Query: 83 PESN-YLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECK 141 E+N Y+F GD+VDRG S+E I L +K+ YP++F LLRGNHE ++N+IYGF E K Sbjct: 250 SETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDHFHLLRGNHETDNMNQIYGFEGEVK 309 Query: 142 RRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGL-SPDLQSMEQIRRIMRPTDVPDQGL 200 +Y ++++ F++ F LP+A ++ K+ HGGL S D +++ IR+I R PD G Sbjct: 310 AKYTAQMYELFSEVFEWLPLAQCINGKVLIMHGGLFSEDGVTLDDIRKIERNRQPPDSGP 369 Query: 201 LCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAK 260 +CDLLWSDP + G + RGVS FG +V FL ++ LD I R+H+V +GYE Sbjct: 370 MCDLLWSDP-QPQNGRSVSKRGVSCQFGPDVTKAFLEENQLDYIIRSHEVKAEGYEVAHG 428 Query: 261 RQLVTLFSAPNYCGEFDNAGAMMSVD-ETLMCSFQILKPADKNKGKYGQFS 310 + VT+FSAPNYC + N + + + L F K ++ Sbjct: 429 GRCVTVFSAPNYCDQMGNKASYIHLQGSDLRPQFHQFTAVPHPNVKPMAYA 479 >3ICF-A nrPDB Length = 335 Score = 349 bits (896), Expect = 1e-96, Method: Composition-based stats. Identities = 100/268 (37%), Positives = 151/268 (56%), Gaps = 9/268 (3%) Query: 26 KNVQLTENEIRGLCLKSREIFLSQPILLELE------APLKICGDIHGQYYDLLRLF-EY 78 K L + + + + +F +P ++ELE + +CGD HGQ+YD+L LF ++ Sbjct: 27 KGKYLPKKYVAAIISHADTLFRQEPSMVELENNSTPDVKISVCGDTHGQFYDVLNLFRKF 86 Query: 79 GGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYD 138 G P+ YLF GD+VDRG S E L KI +P NFFL RGNHE ++N+IYGF D Sbjct: 87 GKVGPKHTYLFNGDFVDRGSWSCEVALLFYCLKILHPNNFFLNRGNHESDNMNKIYGFED 146 Query: 139 ECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQ-SMEQIRRIMRPTDVPD 197 ECK +Y+ +++ F F LP+A +++ HGGL D ++ + I R P Sbjct: 147 ECKYKYSQRIFNMFAQSFESLPLATLINNDYLVMHGGLPSDPSATLSDFKNIDRFAQPPR 206 Query: 198 QGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEF 257 G +LLW+DP ++ G G + RG+ FG ++ +FL + L I R+H++ G +F Sbjct: 207 DGAFMELLWADP-QEANGMGPSQRGLGHAFGPDITDRFLRNNKLRKIFRSHELRMGGVQF 265 Query: 258 FAKRQLVTLFSAPNYCGEFDNAGAMMSV 285 K +L+T+FSAPNYC N G ++ V Sbjct: 266 EQKGKLMTVFSAPNYCDSQGNLGGVIHV 293 >2DFJ-A nrPDB Length = 280 Score = 133 bits (334), Expect = 1e-31, Method: Composition-based stats. Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 17/174 (9%) Query: 61 ICGDIHGQYYDLLRLFEYGGFPPESNYLFL-GDYVDRGKQSLETICLLLAYKIRYPENFF 119 + GD+HG Y +L+ L F P + L+L GD V RG SL+ +L Y ++ Sbjct: 5 LIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLD----VLRYVKSLGDSVR 60 Query: 120 LLRGNHECASINRIYGFY-DECKRRYNIKLWKTFTD-CFNCL---PIAAIVDE-KIFCCH 173 L+ GNH+ + G ++ K R L D N L P+ I +E K+ H Sbjct: 61 LVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAH 120 Query: 174 GGLSP--DLQSMEQIRRIMRPTDVPDQGL-LCDLLWSDPDKDVQGWGENDRGVS 224 G++P DLQ+ ++ R + D D ++ D W RG+ Sbjct: 121 AGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMP---NNWSPELRGLG 171 >1G5B-A nrPDB Length = 221 Score = 90.8 bits (224), Expect = 7e-19, Method: Composition-based stats. Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 14/92 (15%) Query: 59 LKICGDIHGQYYDLLRLFEYGGFPPESNYLF-LGDYVDRGKQSLETICLLLAYKIRYPEN 117 + + GD+HG Y +L+ + GF + + L +GD VDRG +++E + L I +P Sbjct: 15 IWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLEL-----ITFPW- 68 Query: 118 FFLLRGNHECASINRIYGFYDECKRRYNIKLW 149 F +RGNHE I D R N+ W Sbjct: 69 FRAVRGNHEQMMI-------DGLSERGNVNHW 93 >1V73-A nrPDB Length = 342 Score = 57.3 bits (137), Expect = 9e-09, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 93/274 (33%), Gaps = 42/274 (15%) Query: 18 EVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFE 77 ++Q +RP L E ++ S EI P + D+HGQY LL L + Sbjct: 38 KLQVNRPEHCGDLPETKL------SSEIKQIMPDTYLGIKKVVALSDVHGQYDVLLTLLK 91 Query: 78 YGG-FPPESNYLF-------LGDYVDRGKQSLETICLLLAYKIRYPEN---FFLLRGNHE 126 + N+ F GD DRG Q E + + + + LL GNHE Sbjct: 92 KQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMVHLLMGNHE 151 Query: 127 CASI-------NRIYGFYDECKRRYNIKLWKTFTDCFNCL--PIAAIVDEKIFCCHGGLS 177 + ++ Y R KL+ T+ L I + HGG+S Sbjct: 152 QMVLGGDLRYVHQRYDIATTLINRPYNKLYGADTEIGQWLRSKNTIIKINDVLYMHGGIS 211 Query: 178 PDLQ----SMEQIRRIMRP------TDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTF 227 + ++++ + R + LL L + + +G+ S TF Sbjct: 212 SEWISRELTLDKANALYRANVDASKKSLKADDLLNFLFFGNGPTWYRGY------FSETF 265 Query: 228 GAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKR 261 + L +++ I H E F + Sbjct: 266 TEAELDTILQHFNVNHIVVGHTSQERVLGLFHNK 299 >2QJC-A nrPDB Length = 262 Score = 50.0 bits (118), Expect = 2e-06, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 45/140 (32%), Gaps = 18/140 (12%) Query: 51 ILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF-LGDYVDRGKQSLETICLLLA 109 L + + I GDIHG L L F S+ L +GD V++G S + LL Sbjct: 13 TLPNVTGRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSFGVVRLLKR 72 Query: 110 YKIRYPENFFLLRGNHEC-ASINRIYGFYDEC------KRRYNIKLWKTFTDCFNCLP-- 160 + + GNH+ EC K TD L Sbjct: 73 L------GAYSVLGNHDAKLLKLVKKLGKKECLKGRDAKSSLAPLAQSIPTDVETYLSQL 126 Query: 161 --IAAIVDEKIFCCHGGLSP 178 I I + H GL P Sbjct: 127 PHIIRIPAHNVMVAHAGLHP 146 >5VJW-A nrPDB Length = 309 Score = 43.1 bits (100), Expect = 2e-04, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 9/80 (11%) Query: 56 EAPLKI--CGDIHGQYYDLLRL-FEYGGFPPESNY-----LFLGDYVDRGKQSLETICLL 107 + P + GDIHG L L S++ +FLGDY DRG ++ + I L Sbjct: 3 QKPRTVICVGDIHGYISKLNNLWLNLQSAIDPSDFSSALVIFLGDYCDRGPETRKVIDFL 62 Query: 108 LAYKIRYPENFFL-LRGNHE 126 ++ ++P+ + L GNH+ Sbjct: 63 ISLPEKHPDQTHVFLAGNHD 82 >4AZV-A nrPDB Length = 569 Score = 31.9 bits (71), Expect = 0.42, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 23/110 (20%) Query: 204 LLWSDPDKDVQGWGEND---------RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDG 254 +L +D ++ Q W R + FG + V KF + I A + + Sbjct: 226 VLINDFNQPFQHWQNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNK 285 Query: 255 YEFFAKRQLVTL----FSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 300 YE + + +T F AP A+++ E + +++ Sbjct: 286 YELHNEIKFLTQPPAGFDAP----------AVLAHGENAQSGWLVMEKLP 325 >1KAN-A nrPDB Length = 253 Score = 30.0 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 5/40 (12%) Query: 42 SREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGF 81 S EI L +E + PL HGQ++ +L +++ GG+ Sbjct: 81 SEEILLDYASQVESDWPLT-----HGQFFSILPIYDSGGY 115 >4AZW-A nrPDB Length = 471 Score = 29.2 bits (64), Expect = 2.5, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 39/110 (35%), Gaps = 23/110 (20%) Query: 204 LLWSDPDKDVQGWGEND---------RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDG 254 +L +D ++ Q W R + FG + V KF + I A + + Sbjct: 226 VLINDFNQPFQHWQNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNK 285 Query: 255 YEFFAKRQLVTL----FSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 300 +E + + +T F AP A+++ E + +++ Sbjct: 286 HELHNEIKFLTQPPAGFDAP----------AVLAHGENAQSGWLVMEKLP 325 >3HVN-A nrPDB Length = 508 Score = 28.8 bits (63), Expect = 3.4, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 14/26 (53%) Query: 272 YCGEFDNAGAMMSVDETLMCSFQILK 297 Y GE+ N A + DET+ S LK Sbjct: 169 YAGEYGNTQAELQYDETMAYSMSQLK 194 >5GZ5-A nrPDB Length = 830 Score = 28.1 bits (61), Expect = 5.2, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 4/43 (9%) Query: 288 TLMCSFQILKPADKNKGKYGQFSGL--NPGGRPITPPRNSAKA 328 LMC LKPA N G +G + L NP P +P + + Sbjct: 475 NLMCDLLKLKPAP-NNGTHGSLNHLLKNPFYNP-SPAKEQSPP 515 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.139 0.383 Lambda K H 0.267 0.0424 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,498,926 Number of Sequences: 36641 Number of extensions: 551569 Number of successful extensions: 1198 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 1114 Number of HSP's gapped (non-prelim): 42 length of query: 330 length of database: 10,336,785 effective HSP length: 97 effective length of query: 233 effective length of database: 6,782,608 effective search space: 1580347664 effective search space used: 1580347664 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 59 (27.3 bits)