BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P61026 (200 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5SZJ-A nrPDB 412 e-116 5LPN-A nrPDB 359 e-100 5SZI-A nrPDB 280 3e-76 4LHX-A nrPDB 280 3e-76 2RHD-A nrPDB 223 5e-59 3L0I-B nrPDB 220 2e-58 6O62-A nrPDB 218 1e-57 3CPH-A nrPDB 218 2e-57 5SZH-B nrPDB 218 2e-57 2WWX-A nrPDB 217 3e-57 3CUE-F nrPDB 214 1e-56 2OCY-C nrPDB 212 8e-56 1YZN-A nrPDB 210 3e-55 3DZ8-A nrPDB 200 4e-52 4RKF-A nrPDB 199 6e-52 2G6B-A nrPDB 199 9e-52 2GF9-A nrPDB 198 1e-51 3RAB-A nrPDB 197 2e-51 1ZBD-A nrPDB 196 5e-51 6IF2-B nrPDB 192 1e-49 2IL1-A nrPDB 189 6e-49 1Z0A-A nrPDB 182 7e-47 4RKE-A nrPDB 182 1e-46 2A5J-A nrPDB 181 2e-46 5FBL-B nrPDB 177 2e-45 3CPJ-B nrPDB 176 8e-45 4FMC-F nrPDB 175 1e-44 4UJ4-A nrPDB 174 2e-44 2EW1-A nrPDB 174 2e-44 2F9L-A nrPDB 173 4e-44 6HUF-A nrPDB 173 4e-44 2HUP-A nrPDB 172 7e-44 5UB8-A nrPDB 172 7e-44 3BFK-A nrPDB 169 7e-43 5XR6-A nrPDB 167 2e-42 3RWM-B nrPDB 167 3e-42 1X3S-A nrPDB 164 2e-41 2F7S-A nrPDB 162 8e-41 1Z0F-A nrPDB 161 2e-40 3BC1-A nrPDB 160 2e-40 2IEZ-A nrPDB 159 6e-40 2IEY-A nrPDB 159 9e-40 3TSO-A nrPDB 155 1e-38 2BMD-A nrPDB 155 1e-38 2O52-A nrPDB 154 3e-38 2FFQ-A nrPDB 150 3e-37 2GIL-A nrPDB 149 9e-37 2P5S-A nrPDB 147 2e-36 5LEF-A nrPDB 145 8e-36 2G77-B nrPDB 145 9e-36 1Z06-A nrPDB 145 2e-35 2FG5-A nrPDB 143 5e-35 1D5C-A nrPDB 142 8e-35 4G01-B nrPDB 139 7e-34 2HEI-A nrPDB 139 1e-33 4PHF-A nrPDB 136 5e-33 1TU4-A nrPDB 136 5e-33 4CZ2-A nrPDB 134 2e-32 1YVD-A nrPDB 132 7e-32 4KYI-B nrPDB 131 2e-31 1EK0-A nrPDB 130 3e-31 5YOZ-A nrPDB 129 9e-31 6FF8-A nrPDB 129 1e-30 1YZU-A nrPDB 128 1e-30 5LDD-C nrPDB 127 4e-30 6IYB-A nrPDB 121 2e-28 1WMS-A nrPDB 120 4e-28 1Z22-A nrPDB 119 1e-27 4QXA-A nrPDB 118 2e-27 2OCB-A nrPDB 116 7e-27 5CLL-A nrPDB 109 9e-25 5UWI-A nrPDB 108 1e-24 2N1B-A nrPDB 108 1e-24 5CM8-B nrPDB 106 8e-24 3WYF-A nrPDB 103 6e-23 5XOJ-A nrPDB 103 7e-23 4DXA-A nrPDB 100 3e-22 4M8N-E nrPDB 100 4e-22 2KE5-A nrPDB 100 7e-22 4DJT-A nrPDB 98 2e-21 3E5H-A nrPDB 97 4e-21 1ZC4-A nrPDB 94 6e-20 2J1L-A nrPDB 92 2e-19 2WBL-C nrPDB 91 3e-19 5XC3-A nrPDB 91 4e-19 4KLZ-A nrPDB 90 8e-19 3CLV-A nrPDB 89 8e-19 2J0V-A nrPDB 88 2e-18 2ERY-A nrPDB 87 3e-18 5WDR-A nrPDB 87 5e-18 5WDQ-A nrPDB 87 6e-18 5ZHX-e nrPDB 86 8e-18 5C2K-A nrPDB 86 9e-18 3BWD-D nrPDB 86 1e-17 4KU4-A nrPDB 86 1e-17 4WA7-A nrPDB 86 1e-17 5UHV-A nrPDB 85 2e-17 2NTY-C nrPDB 85 2e-17 3CON-A nrPDB 85 2e-17 2FV8-A nrPDB 83 9e-17 2FN4-A nrPDB 83 1e-16 3REG-A nrPDB 82 2e-16 5JCP-B nrPDB 81 2e-16 2ATX-A nrPDB 81 3e-16 2ERX-A nrPDB 81 3e-16 4U5X-A nrPDB 80 5e-16 3OES-A nrPDB 80 5e-16 3TH5-A nrPDB 79 2e-15 4MIT-A nrPDB 78 3e-15 5C1S-A nrPDB 77 4e-15 2ATV-A nrPDB 77 4e-15 3RYT-C nrPDB 76 1e-14 5ZVP-A nrPDB 76 1e-14 3A58-B nrPDB 75 2e-14 1RYH-A nrPDB 75 2e-14 2W2X-A nrPDB 74 4e-14 2Q3H-A nrPDB 74 6e-14 3T5G-A nrPDB 73 8e-14 3PIR-A nrPDB 72 1e-13 2WKQ-A nrPDB 72 2e-13 3VHL-B nrPDB 70 4e-13 3RAP-R nrPDB 69 1e-12 2GF0-A nrPDB 68 3e-12 5VCU-A nrPDB 67 5e-12 1M7B-A nrPDB 62 1e-10 1GWN-A nrPDB 62 1e-10 2YC4-C nrPDB 60 9e-10 2REX-B nrPDB 59 1e-09 2NZJ-A nrPDB 57 4e-09 5NZV-F nrPDB 57 5e-09 3D6T-B nrPDB 56 8e-09 2G3Y-A nrPDB 56 1e-08 2CJW-A nrPDB 55 1e-08 3LVQ-E nrPDB 55 2e-08 2A5F-A nrPDB 54 3e-08 4ILE-A nrPDB 54 6e-08 2AL7-A nrPDB 52 1e-07 1Z6X-A nrPDB 52 1e-07 6BBQ-A nrPDB 52 2e-07 3LRP-A nrPDB 52 2e-07 3O47-A nrPDB 52 2e-07 5UF8-A nrPDB 52 2e-07 4YLG-A nrPDB 52 2e-07 6FAE-B nrPDB 51 3e-07 2B6H-A nrPDB 51 4e-07 3AQ4-A nrPDB 51 4e-07 1MOZ-A nrPDB 50 7e-07 3CBQ-A nrPDB 50 7e-07 3Q72-A nrPDB 49 1e-06 3C5C-A nrPDB 49 1e-06 5HZH-A nrPDB 49 1e-06 1KSG-A nrPDB 49 2e-06 6DFF-C nrPDB 48 2e-06 1J2J-A nrPDB 48 3e-06 4WNR-A nrPDB 47 7e-06 3Q85-A nrPDB 47 7e-06 5EE5-B nrPDB 45 1e-05 4C0K-A nrPDB 45 3e-05 4ZI3-A nrPDB 44 6e-05 1YZG-A nrPDB 39 0.002 2H16-A nrPDB 39 0.002 3BH6-A nrPDB 39 0.002 6HLU-A nrPDB 37 0.005 3DPU-A nrPDB 37 0.006 5DE3-A nrPDB 37 0.007 6GNI-B nrPDB 36 0.010 1M2O-B nrPDB 35 0.016 6D4G-A nrPDB 35 0.030 3C5H-A nrPDB 34 0.036 2H57-A nrPDB 33 0.070 3IHW-A nrPDB 32 0.19 6IAE-A nrPDB 32 0.23 2QAG-A nrPDB 32 0.23 1HEY-A nrPDB 32 0.27 3FTQ-A nrPDB 31 0.30 2X77-A nrPDB 31 0.41 3T1O-A nrPDB 30 0.57 5GAD-l nrPDB 30 0.64 2QAG-B nrPDB 30 0.67 2GAO-A nrPDB 30 0.76 5W2O-A nrPDB 30 0.77 6A34-A nrPDB 30 0.78 4KV9-A nrPDB 29 1.4 6ACF-A nrPDB 28 2.1 1F6B-A nrPDB 28 2.7 5CYO-A nrPDB 28 2.9 4ARZ-A nrPDB 28 3.1 6CS8-A nrPDB 28 3.2 2IWR-A nrPDB 28 3.4 4V62-AO nrPDB 28 3.7 3V9H-A nrPDB 27 4.1 3J9V-F nrPDB 27 5.6 2YV5-A nrPDB 27 6.2 5IRR-A nrPDB 27 6.9 5IPK-A nrPDB 27 7.0 3J1Q-A nrPDB 27 7.0 6CES-A nrPDB 27 7.3 1LEH-A nrPDB 27 8.0 1YOB-A nrPDB 26 9.0 >5SZJ-A nrPDB Length = 202 Score = 412 bits (1059), Expect = e-116, Method: Compositional matrix adjust. Identities = 200/200 (100%), Positives = 200/200 (100%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL Sbjct: 3 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 62 Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL Sbjct: 63 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 122 Query: 121 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN Sbjct: 123 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 182 Query: 181 SENVDISSGGGVTGWKSKCC 200 SENVDISSGGGVTGWKSKCC Sbjct: 183 SENVDISSGGGVTGWKSKCC 202 >5LPN-A nrPDB Length = 177 Score = 359 bits (921), Expect = e-100, Method: Compositional matrix adjust. Identities = 175/175 (100%), Positives = 175/175 (100%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL Sbjct: 3 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 62 Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL Sbjct: 63 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 122 Query: 121 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP Sbjct: 123 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 177 >5SZI-A nrPDB Length = 209 Score = 280 bits (716), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 136/179 (75%), Positives = 157/179 (87%), Gaps = 1/179 (0%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 KTYD LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T+EL GK+IKLQIW Sbjct: 5 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 64 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 DTAGQERF TITT+YYRGAMGIMLVYDITN KSF+NI W+RNI+EHA+ DVE+M+LGNK Sbjct: 65 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 124 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK-EPNS 181 CD++DKR V K +GE++A ++GI+F ETSAKANIN+E AF TLA DI K K E NS Sbjct: 125 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNS 183 >4LHX-A nrPDB Length = 186 Score = 280 bits (716), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 136/179 (75%), Positives = 157/179 (87%), Gaps = 1/179 (0%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 KTYD LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T+EL GK+IKLQIW Sbjct: 5 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 64 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 DTAGQERF TITT+YYRGAMGIMLVYDITN KSF+NI W+RNI+EHA+ DVE+M+LGNK Sbjct: 65 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 124 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK-EPNS 181 CD++DKR V K +GE++A ++GI+F ETSAKANIN+E AF TLA DI K K E NS Sbjct: 125 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNS 183 >2RHD-A nrPDB Length = 175 Score = 223 bits (568), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 99/170 (58%), Positives = 136/170 (80%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+ L+ K +KLQIWDT Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDT 65 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQERF TIT+SYYRGA GI++VYD+T+ SF+N+ +W++ ID +A E+V ++L+GNKCD Sbjct: 66 AGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKCD 125 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175 + KRVV +G ++A HGI+F ETSAK N+E+AF T+A +I ++ Sbjct: 126 LVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQ 175 >3L0I-B nrPDB Length = 199 Score = 220 bits (561), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 99/168 (58%), Positives = 135/168 (80%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+EL GK IKLQIWDT Sbjct: 30 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 89 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL+ ID +A+E+V ++L+GNKCD Sbjct: 90 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 149 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 + K+VV ++ A GI F ETSAK N+E++F+T+A +I ++ Sbjct: 150 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKR 197 >6O62-A nrPDB Length = 184 Score = 218 bits (555), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 97/177 (54%), Positives = 138/177 (77%), Gaps = 1/177 (0%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61 + + YD++ KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T+E +GK+IKLQ Sbjct: 7 SSRAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQ 66 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 +WDTAGQERF TITT+YYRGAMGI+L+YD+T+ +SFEN+ W + + +HANED + L+G Sbjct: 67 VWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVG 126 Query: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178 NKCD + R V K +G+++A + + F E SAK+N N++ F LA I+++ V+E Sbjct: 127 NKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELA-SIIQEKHVEE 182 >3CPH-A nrPDB Length = 213 Score = 218 bits (554), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 101/170 (59%), Positives = 137/170 (80%), Gaps = 1/170 (0%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 K+YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTV++ GKK+KLQ+W Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 DTAGQERF TITT+YYRGAMGI+LVYD+T+ ++F NI +W + ++EHAN++ + +L+GNK Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 DM + RVV +GE +A+E GI F E+SAK + N+ + F TLA+ I K Sbjct: 135 SDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183 >5SZH-B nrPDB Length = 203 Score = 218 bits (554), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 98/168 (58%), Positives = 134/168 (79%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+EL GK IKLQIWDT Sbjct: 7 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 66 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQERF TIT+SYYRGA GI++VYD+T+ +S+ N+ +WL+ ID +A+E+V ++L+GNK D Sbjct: 67 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSD 126 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 + K+VV ++ A GI F ETSAK N+E+AF+T+A +I ++ Sbjct: 127 LTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKR 174 >2WWX-A nrPDB Length = 175 Score = 217 bits (553), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 98/168 (58%), Positives = 134/168 (79%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+EL GK IKLQIWDT Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL+ ID +A+E+V ++L+G KCD Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGIKCD 124 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 + K+VV ++ A GI F ETSAK N+E++F+T+A +I ++ Sbjct: 125 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKR 172 >3CUE-F nrPDB Length = 206 Score = 214 bits (546), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 107/203 (52%), Positives = 141/203 (69%), Gaps = 9/203 (4%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFKLLLIG+SGVGK+C+L RFSDD + +ISTIG+DFKIKTVEL GK +KLQIWDT Sbjct: 5 YDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDT 64 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQERF TIT+SYYRG+ GI++VYD+T+ +SF + WL+ ID +A V ++L+GNKCD Sbjct: 65 AGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCD 124 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI--------LRKTPVK 177 + DKRVV ++ A + + F ETSA + N+E AFLT+A I L +T K Sbjct: 125 LKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETTQK 184 Query: 178 EPNSENVDISSGGGVTGWKSKCC 200 + + NV++ G +T CC Sbjct: 185 KEDKGNVNL-KGQSLTNTGGGCC 206 >2OCY-C nrPDB Length = 170 Score = 212 bits (540), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 99/167 (59%), Positives = 134/167 (80%), Gaps = 1/167 (0%) Query: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 D + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTV++ GKK+KLQ+WDTA Sbjct: 1 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 60 Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDM 126 GQERF TITT+YYRGAMGI+LVYD+T+ ++F NI +W + ++EHAN++ + +L+GNK DM Sbjct: 61 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM 120 Query: 127 DDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 + RVV +GE +A+E GI F E+SAK + N+ + F TLA+ I K Sbjct: 121 -ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 166 >1YZN-A nrPDB Length = 185 Score = 210 bits (535), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 98/165 (59%), Positives = 126/165 (76%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFKLLLIG+SGVGK+C+L RFSDD + +ISTIG+DFKIKTVEL GK +KLQIWDT Sbjct: 18 YDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDT 77 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQERF TIT+SYYRG+ GI++VYD+T+ +SF + WL+ ID +A V ++L+GNKCD Sbjct: 78 AGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCD 137 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 + DKRVV ++ A + + F ETSA + N+E AFLT+A I Sbjct: 138 LKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQI 182 >3DZ8-A nrPDB Length = 191 Score = 200 bits (508), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 91/168 (54%), Positives = 125/168 (74%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 +D +FKLL+IG+S VGKT LFR++DD F F+ST+GIDFK+KTV K++KLQIWDT Sbjct: 20 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDT 79 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQER+ TITT+YYRGAMG +L+YDITN +SF + W I ++ ++ + +L+GNKCD Sbjct: 80 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCD 139 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 M+++RVVP KG+ +A + G FFE SAK NI++ +AF L + I K Sbjct: 140 MEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDK 187 >4RKF-A nrPDB Length = 190 Score = 199 bits (506), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 89/172 (51%), Positives = 129/172 (75%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61 A + +D +FKLL+IG+S VGKT LFR++DD+F + F+ST+GIDFK+KTV K++KLQ Sbjct: 16 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQ 75 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 IWDTAG ER+ TITT+YYRGAMG +L+YD+TN SF ++ W+ I ++ ++ + +L+G Sbjct: 76 IWDTAGLERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVG 135 Query: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 NKCDM+D+RV+ +G Q+A + G+ FFETSAK N+N++ F L + I K Sbjct: 136 NKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDK 187 >2G6B-A nrPDB Length = 180 Score = 199 bits (505), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 93/175 (53%), Positives = 131/175 (74%), Gaps = 2/175 (1%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNT-TFISTIGIDFKIKTVELQGKKIKLQIWD 64 YD+ FK++L+GDSGVGKTC+L RF D AF TFIST+GIDF+ K +++ G K+KLQ+WD Sbjct: 7 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWD 66 Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKC 124 TAGQERF ++T +YYR A ++L+YD+TN SF+NI WL I E+A DV MLLGNK Sbjct: 67 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKV 126 Query: 125 DMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 179 D +RVV + GE++A+E+G+ F ETSAK +N++ AF +A+++ R++ +K P Sbjct: 127 DSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKRRS-MKAP 180 >2GF9-A nrPDB Length = 189 Score = 198 bits (503), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 91/167 (54%), Positives = 123/167 (73%) Query: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 D +FKLLLIG+S VGKT LFR++DD+F F+ST+GIDFK+KTV K+IKLQIWDTA Sbjct: 20 DYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTA 79 Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDM 126 GQER+ TITT+YYRGAMG +L+YDI N +SF + W I ++ ++ + +L+GNKCD+ Sbjct: 80 GQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDL 139 Query: 127 DDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 +D+RVVP G ++A + G FFE SAK NIN+++ F L + I K Sbjct: 140 EDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEK 186 >3RAB-A nrPDB Length = 169 Score = 197 bits (501), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 90/168 (53%), Positives = 124/168 (73%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 +D +FK+L+IG+S VGKT LFR++DD+F F+ST+GIDFK+KT+ K+IKLQIWDT Sbjct: 2 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 61 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQER+ TITT+YYRGAMG +L+YDITN +SF + W I ++ ++ + +L+GNKCD Sbjct: 62 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD 121 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 M+D+RVV +G Q+A G FFE SAK NIN+++ F L + I K Sbjct: 122 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEK 169 >1ZBD-A nrPDB Length = 203 Score = 196 bits (499), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 96/191 (50%), Positives = 134/191 (70%), Gaps = 7/191 (3%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 +D +FK+L+IG+S VGKT LFR++DD+F F+ST+GIDFK+KT+ K+IKLQIWDT Sbjct: 5 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 64 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AG ER+ TITT+YYRGAMG +L+YDITN +SF + W I ++ ++ + +L+GNKCD Sbjct: 65 AGLERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD 124 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVD 185 M+D+RVV +G Q+A G FFE SAK NIN+++ F L + I K SE++D Sbjct: 125 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKM------SESLD 178 Query: 186 ISSGGGVTGWK 196 ++ VTG K Sbjct: 179 -TADPAVTGAK 188 >6IF2-B nrPDB Length = 186 Score = 192 bits (487), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 89/169 (52%), Positives = 131/169 (77%), Gaps = 1/169 (0%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 + YD LFKLL+IGDSGVGK+ +L RF+D+ F+ ++I+TIG+DFKI+TVE+ G+K+KLQIW Sbjct: 9 RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIW 68 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 DTAG ERF TIT++YYRG G+++VYD+T+ +SF N+ +WL I+++ +DV R+L+GNK Sbjct: 69 DTAGLERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNK 127 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 D +++VV + A + GI+ FETSAK N+N+E+ F + E +LR Sbjct: 128 NDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLR 176 >2IL1-A nrPDB Length = 192 Score = 189 bits (480), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 89/173 (51%), Positives = 132/173 (76%), Gaps = 1/173 (0%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61 + + D ++++IG GVGKT ++ RF+DD F ST+G+DFKIKTVEL+GKKI+LQ Sbjct: 19 SPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQ 78 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 IWDTAGQERF++IT++YYR A GI+LVYDIT ++F+++ KW++ ID++A+ED E +L+G Sbjct: 79 IWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVG 138 Query: 122 NKCDMDDKRVVPKGKGEQIARE-HGIRFFETSAKANINIEKAFLTLAEDILRK 173 NK D + R + + +GE+ A++ G+RF E SAK N N+++ FL L +DIL+K Sbjct: 139 NKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKK 191 >1Z0A-A nrPDB Length = 174 Score = 182 bits (463), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 84/168 (50%), Positives = 119/168 (70%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 Y LFK ++IGD+GVGK+C+L +F+D F TIG++F + + + GK+IKLQIWDT Sbjct: 7 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 66 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQE F +IT SYYRGA G +LVYDIT +F +++ WL + +H+N ++ ML+GNK D Sbjct: 67 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 126 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 ++ +R V K +GE AREHG+ F ETSAK N+E+AF+ A++I K Sbjct: 127 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK 174 >4RKE-A nrPDB Length = 176 Score = 182 bits (461), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 83/169 (49%), Positives = 120/169 (71%) Query: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64 +Y LFK ++IGD+GVGK+C+L +F+D F TIG++F + + + GK+IKLQIWD Sbjct: 6 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 65 Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKC 124 TAG E F +IT SYYRGA G +LVYDIT ++F +++ WL + +H+N ++ ML+GNK Sbjct: 66 TAGLEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKS 125 Query: 125 DMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 D+D +R V K +GE AREHG+ F ETSA+ N+E+AF+ A++I K Sbjct: 126 DLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEK 174 >2A5J-A nrPDB Length = 191 Score = 181 bits (459), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 83/165 (50%), Positives = 120/165 (72%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 LFK ++IGD+GVGK+C+L +F+D F TIG++F + V + GK+IKLQIWDTAGQ Sbjct: 21 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQ 80 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDD 128 E F +IT SYYRGA G +LVYDIT ++F +++ WL + +H++ ++ ML+GNK D++ Sbjct: 81 ESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLES 140 Query: 129 KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 +R V + +GE AREHG+ F ETSAK N+E+AF+ A++I RK Sbjct: 141 RRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRK 185 >5FBL-B nrPDB Length = 221 Score = 177 bits (449), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 81/173 (46%), Positives = 120/173 (69%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFK++LIGDSGVGK+ +L RF+ + FN STIG++F +++++ GK IK QIWDT Sbjct: 13 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 72 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQER+ IT++YYRGA+G +LVYDI ++EN+ +WL+ + +HA+ ++ ML+GNK D Sbjct: 73 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 132 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178 + R VP + A ++G+ F ETSA + N+E AF T+ +I R K+ Sbjct: 133 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ 185 >3CPJ-B nrPDB Length = 223 Score = 176 bits (445), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 83/168 (49%), Positives = 121/168 (72%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YDLLFK++LIGDSGVGK+ +L RF+ + FN STIG++F +T+E++GK+IK QIWDT Sbjct: 10 YDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDT 69 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQER+ IT++YYRGA+G ++VYDI+ S+EN + WL + E+A+++V L+GNK D Sbjct: 70 AGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSD 129 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 + R VP + + A+E+ + F ETSA + N++KAF L I +K Sbjct: 130 LAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQK 177 >4FMC-F nrPDB Length = 117 Score = 175 bits (444), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 76/115 (66%), Positives = 101/115 (87%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERF 71 LLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+EL GK IKLQIWDTAGQERF Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60 Query: 72 HTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDM 126 TIT+SYYRGA GI++VYD+T+ +SF N+ +WL+ ID +A+E+V ++L+GNKCD+ Sbjct: 61 RTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 115 >4UJ4-A nrPDB Length = 185 Score = 174 bits (441), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 80/173 (46%), Positives = 119/173 (68%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFK++LIGDSGVGK+ +L RF+ + FN STIG++F +++++ GK IK QIWDT Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 66 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AG ER+ IT++YYRGA+G +LVYDI ++EN+ +WL+ + +HA+ ++ ML+GNK D Sbjct: 67 AGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 126 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178 + R VP + A ++G+ F ETSA + N+E AF T+ +I R K+ Sbjct: 127 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ 179 >2EW1-A nrPDB Length = 201 Score = 174 bits (441), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 82/162 (50%), Positives = 117/162 (72%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFK++LIG++GVGKTC++ RF+ F +TIG+DF IKTVE+ G+K+KLQIWDT Sbjct: 23 YDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDT 82 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQERF +IT SYYR A ++L YDIT +SF + +WLR I+++A+ V +L+GNK D Sbjct: 83 AGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKID 142 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167 + ++R V + + E+ + + + ETSAK + N+EK FL LA Sbjct: 143 LAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLA 184 >2F9L-A nrPDB Length = 199 Score = 173 bits (439), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 84/192 (43%), Positives = 125/192 (65%), Gaps = 10/192 (5%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFK++LIGDSGVGK+ +L RF+ + FN STIG++F +++++ GK IK QIWDT Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 61 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQER+ IT++YYRGA+G +LVYDI ++EN+ +WL+ + +HA+ ++ ML+GNK D Sbjct: 62 AGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 121 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE------- 178 + R VP + A ++ + F ETSA + N+E+AF + +I R K+ Sbjct: 122 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAH 181 Query: 179 ---PNSENVDIS 187 P + VDIS Sbjct: 182 DESPGNNVVDIS 193 >6HUF-A nrPDB Length = 182 Score = 173 bits (438), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 80/169 (47%), Positives = 121/169 (71%), Gaps = 1/169 (0%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD L K L +GDSGVGKT VL++++D FN+ FI+T+GIDF+ KT+ K+IKLQ+WDT Sbjct: 6 YDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQLWDT 65 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHA-NEDVERMLLGNKC 124 AG ERF ++TT+++R AMG +L++D+TN +SF N+ W+ + HA +E+ + +L GNK Sbjct: 66 AGLERFRSLTTAFFRDAMGFLLLFDLTNEESFLNVRNWISQLKTHAYSENPDIVLCGNKS 125 Query: 125 DMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 D++D+RVV + Q+A +GI +FETSA NI +A L + I+++ Sbjct: 126 DLEDERVVAAAEARQLAEHYGIPYFETSAANGTNISQAIEMLLDLIMKR 174 >2HUP-A nrPDB Length = 201 Score = 172 bits (437), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 82/169 (48%), Positives = 120/169 (71%), Gaps = 1/169 (0%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFKL+L+GD+ VGKTCV+ RF AF+ STIG+DF +KT+E+QGK++KLQIWDT Sbjct: 26 YDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDT 85 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQERF TIT SYYR A G +L YDIT SF ++ W+ ++ ++A ++ ++L+GNK D Sbjct: 86 AGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSD 145 Query: 126 MDDKRVVPKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDILRK 173 + + R V + + +A + I ETSAK + N+E+AFL +A +++ + Sbjct: 146 LSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMR 194 >5UB8-A nrPDB Length = 222 Score = 172 bits (437), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 81/189 (42%), Positives = 130/189 (68%), Gaps = 1/189 (0%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 Y+ L+K++LIGDSGVGK+ +L RF+ D FN STIG++F +T+E+ GK++K QIWDT Sbjct: 12 YEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDT 71 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQER+ IT++YYRGA+G ++VYDI +S+E++S+WL+ + EHA+ ++ L+GNK D Sbjct: 72 AGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGNKSD 131 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE-PNSENV 184 +D R VP + + A E+ + F E SA ++ N++ +F L ++I + N+++ Sbjct: 132 LDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLENNDSK 191 Query: 185 DISSGGGVT 193 ++ GG T Sbjct: 192 QTNTAGGPT 200 >3BFK-A nrPDB Length = 181 Score = 169 bits (428), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 83/166 (50%), Positives = 115/166 (69%), Gaps = 1/166 (0%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-KLQIWD 64 YD LFK++LIGDSGVGK+ +L RF+ D FN STIG++F K+++L+ KI K QIWD Sbjct: 4 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWD 63 Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKC 124 TAGQER+ IT++YYRGA+G +LVYDIT SFENI KWL+ + ++A+ ++ +L+GNK Sbjct: 64 TAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKS 123 Query: 125 DMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 D+ RV+ Q A++ + F ETSA N+E AF L +I Sbjct: 124 DLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEI 169 >5XR6-A nrPDB Length = 194 Score = 167 bits (424), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 77/158 (48%), Positives = 108/158 (68%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFKL+LIGDSGVGK+ +L RF+ + FN STIG++F KT +++GK +K QIWDT Sbjct: 22 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDT 81 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQER+ IT++YYRGA+G +L+YD+T +FEN ++WLR + H + ++ ML+GNKCD Sbjct: 82 AGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCD 141 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAF 163 + V + + A + F ETSA N+E AF Sbjct: 142 LRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAF 179 >3RWM-B nrPDB Length = 185 Score = 167 bits (423), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 80/161 (49%), Positives = 114/161 (70%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFK++LIGDSGVGK+ +L RF+ D FN STIG++F +T+E++ KKIK QIWDT Sbjct: 7 YDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDT 66 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AG ER+ IT++YYRGA+G ++VYDI+ S+EN + WL + E+A+++V L+GNK D Sbjct: 67 AGLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSD 126 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTL 166 + R VP + + A E+ + F ETSA + N++KAF L Sbjct: 127 LAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFREL 167 >1X3S-A nrPDB Length = 195 Score = 164 bits (416), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 82/181 (45%), Positives = 119/181 (65%), Gaps = 2/181 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K+L+IG+SGVGK+ +L RF+DD F+ +TIG+DFK+KT+ + G K KL IWDTAGQE Sbjct: 16 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 75 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANE-DVERMLLGNKCDMDD 128 RF T+T SYYRGA G++LVYD+T +F + WL ++ + D+ ML+GNK D ++ Sbjct: 76 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKEN 135 Query: 129 KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISS 188 R V + +G + AR+H + F E SAK ++ AF L E I++ + E ++N SS Sbjct: 136 -REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNSGPSS 194 Query: 189 G 189 G Sbjct: 195 G 195 >2F7S-A nrPDB Length = 217 Score = 162 bits (410), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 83/196 (42%), Positives = 129/196 (65%), Gaps = 11/196 (5%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV--ELQGK------- 56 YD L KLL +GDSGVGKT L+R++D+ FN FI+T+GIDF+ K V QG Sbjct: 22 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKA 81 Query: 57 -KIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN-ED 114 K+ LQ+WDTAGQERF ++TT+++R AMG +L++D+T+ +SF N+ W+ + +A E+ Sbjct: 82 FKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 141 Query: 115 VERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 + +L+GNK D+ D+R V + + ++A ++GI +FETSA N+EKA TL + I+++ Sbjct: 142 PDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 201 Query: 175 PVKEPNSENVDISSGG 190 ++ D +GG Sbjct: 202 EQCVEKTQIPDTVNGG 217 >1Z0F-A nrPDB Length = 179 Score = 161 bits (408), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 76/171 (44%), Positives = 111/171 (64%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61 A Y +FK ++IGD GVGK+C+L +F++ F TIG++F + +E+ G+KIKLQ Sbjct: 8 APYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQ 67 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 IWDTAGQERF +T SYYRGA G ++VYDIT ++ ++S WL + N + +L+G Sbjct: 68 IWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIG 127 Query: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 NK D++ +R V + +Q A E+G+ F E SAK N+E AFL A+ I + Sbjct: 128 NKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQ 178 >3BC1-A nrPDB Length = 195 Score = 160 bits (406), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 78/184 (42%), Positives = 123/184 (66%), Gaps = 11/184 (5%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ------ 54 M+ YD L K L +GDSGVGKT VL++++D FN+ FI+T+GIDF+ K V + Sbjct: 3 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDG 62 Query: 55 ----GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH 110 G++I LQ+WDTAG ERF ++TT+++R AMG +L++D+TN +SF N+ W+ + H Sbjct: 63 AVGRGQRIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH 122 Query: 111 A-NEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAED 169 A +E+ + +L GNK D++D+R V + + ++A ++GI +FETSA NI A L + Sbjct: 123 AYSENPDIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTNISHAIEMLLDL 182 Query: 170 ILRK 173 I+++ Sbjct: 183 IMKR 186 >2IEZ-A nrPDB Length = 220 Score = 159 bits (403), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 82/201 (40%), Positives = 130/201 (64%), Gaps = 11/201 (5%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV--ELQGK-- 56 M YD L KLL +GDSGVGKT L+R++D+ FN FI+T+GIDF+ K V + QG Sbjct: 3 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADG 62 Query: 57 ------KIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH 110 K+ LQ+WDTAG ERF ++TT+++R AMG +L++D+T+ +SF N+ W+ + + Sbjct: 63 ASGKAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 122 Query: 111 AN-EDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAED 169 A E+ + +L+GNK D+ D+R V + + ++A ++GI +FETSA N+EK+ TL + Sbjct: 123 AYCENPDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDL 182 Query: 170 ILRKTPVKEPNSENVDISSGG 190 I+++ ++ D +GG Sbjct: 183 IMKRMEKCVEKTQVPDTVNGG 203 >2IEY-A nrPDB Length = 195 Score = 159 bits (401), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 79/184 (42%), Positives = 124/184 (67%), Gaps = 11/184 (5%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV--ELQGK-- 56 M YD L KLL +GDSGVGKT L+R++D+ FN FI+T+GIDF+ K V + QG Sbjct: 3 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADG 62 Query: 57 ------KIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH 110 K+ LQ+WDTAG ERF ++TT+++R AMG +L++D+T+ +SF N+ W+ + + Sbjct: 63 ASGKAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 122 Query: 111 AN-EDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAED 169 A E+ + +L+GNK D+ D+R V + + ++A ++GI +FETSA N+EK+ TL + Sbjct: 123 AYCENPDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDL 182 Query: 170 ILRK 173 I+++ Sbjct: 183 IMKR 186 >3TSO-A nrPDB Length = 178 Score = 155 bits (392), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 72/170 (42%), Positives = 112/170 (65%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 Y+ +FK++LIG+SGVGKT +L RF+ + F+ +TIG++F +TV L +K QIWDT Sbjct: 7 YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDT 66 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AG ER+ IT++YYRGA+G +LV+D+T +++ + +WL+ + +HA + ML+GNK D Sbjct: 67 AGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSD 126 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175 + R VP + A +G+ F ETSA + N+E AF T+ ++I K Sbjct: 127 LSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVS 176 >2BMD-A nrPDB Length = 186 Score = 155 bits (392), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 78/181 (43%), Positives = 117/181 (64%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 +TYD LFK L+IG++G GK+C+L +F + F TIG++F K + + GK +KLQIW Sbjct: 5 ETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIW 64 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 DTAGQERF ++T SYYRGA G +LVYDIT+ +++ ++ WL + A++++ +L GNK Sbjct: 65 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNK 124 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSEN 183 D+D R V + + A+E+ + F ETSA N+E+AF+ A IL K E + E Sbjct: 125 KDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPER 184 Query: 184 V 184 + Sbjct: 185 M 185 >2O52-A nrPDB Length = 200 Score = 154 bits (388), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 77/178 (43%), Positives = 115/178 (64%) Query: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 D LFK L+IG +G GK+C+L +F ++ F TIG++F + V + GK +KLQIWDTA Sbjct: 23 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTA 82 Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDM 126 GQERF ++T SYYRGA G +LVYDIT+ +++ +++ WL + A+ ++ +L GNK D+ Sbjct: 83 GQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDL 142 Query: 127 DDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENV 184 D +R V + + A+E+ + F ETSA N+E+AFL A IL K E + E + Sbjct: 143 DPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 200 >2FFQ-A nrPDB Length = 171 Score = 150 bits (380), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 73/162 (45%), Positives = 108/162 (66%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+ +G+ VGKT ++ RF D+F+ T+ +TIGIDF KT+ L+ + ++LQ+WDTAGQE Sbjct: 3 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 62 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 RF ++ SY R + ++VYDITN SF+ SKW+ ++ DV ML+GNK D+ DK Sbjct: 63 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 122 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL 171 R + +GEQ A+E + F ETSAK N+++ F +A +L Sbjct: 123 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALL 164 >2GIL-A nrPDB Length = 162 Score = 149 bits (375), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 72/158 (45%), Positives = 107/158 (67%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+ +G+ VGKT ++ RF D+F+ T+ +TIGIDF KT+ L+ + ++LQ+WDTAGQE Sbjct: 2 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 61 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 RF ++ SY R + ++VYDITN SF+ +KW+ ++ DV ML+GNK D+ DK Sbjct: 62 RFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADK 121 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167 R V +GE+ A+E + F ETSAKA N+++ F +A Sbjct: 122 RQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 159 >2P5S-A nrPDB Length = 199 Score = 147 bits (372), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 74/171 (43%), Positives = 113/171 (66%), Gaps = 6/171 (3%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +K++L GD+ VGK+ L R + F +T+G+DF++KT+ + G++ LQ+WDTAGQE Sbjct: 29 YKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQE 88 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDD- 128 RF +I SY+R A G++L+YD+T KSF NI +W+ I++ A+E V ML+GNK D+ D Sbjct: 89 RFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAHETVPIMLVGNKADIRDT 148 Query: 129 -----KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 ++ VP GE++A +G F ETSAK NI +A L LA ++ ++T Sbjct: 149 AATEGQKCVPGHFGEKLAMTYGALFCETSAKDGSNIVEAVLHLAREVKKRT 199 >5LEF-A nrPDB Length = 191 Score = 145 bits (367), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 71/158 (44%), Positives = 106/158 (67%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+ +G+ VGKT ++ RF D+F+ T+ +TIGIDF KT+ L+ + ++LQ+WDTAG E Sbjct: 10 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGLE 69 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 RF ++ SY R + ++VYDITN SF+ +KW+ ++ DV ML+GNK D+ DK Sbjct: 70 RFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADK 129 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167 R V +GE+ A+E + F ETSAKA N+++ F +A Sbjct: 130 RQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVA 167 >2G77-B nrPDB Length = 198 Score = 145 bits (367), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 71/168 (42%), Positives = 107/168 (63%), Gaps = 7/168 (4%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 +FK+++IGDS VGKTC+ +RF F +TIG+DF+ + V++ G++IK+Q+WDTAGQ Sbjct: 29 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQ 88 Query: 69 ERFH-TITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH--ANEDVERMLLGNKCD 125 ERF ++ YYR ++ VYD+TN SF ++ W+ +H AN D+ R+L+GNKCD Sbjct: 89 ERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLAN-DIPRILVGNKCD 147 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKA---NINIEKAFLTLAEDI 170 + VP ++ A H + FETSAK N ++E F+TLA + Sbjct: 148 LRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKL 195 >1Z06-A nrPDB Length = 189 Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 71/168 (42%), Positives = 107/168 (63%), Gaps = 7/168 (4%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 +FK+++IGDS VGKTC+ +RF F +TIG+DF+ + V++ G++IK+Q+WDTAGQ Sbjct: 20 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQ 79 Query: 69 ERFH-TITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH--ANEDVERMLLGNKCD 125 ERF ++ YYR ++ VYD+TN SF ++ W+ +H AN D+ R+L+GNKCD Sbjct: 80 ERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLAN-DIPRILVGNKCD 138 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKA---NINIEKAFLTLAEDI 170 + VP ++ A H + FETSAK N ++E F+TLA + Sbjct: 139 LRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKL 186 >2FG5-A nrPDB Length = 192 Score = 143 bits (360), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 72/171 (42%), Positives = 100/171 (58%), Gaps = 4/171 (2%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K+ L+GD+GVGK+ ++ RF D F+ TIG F KTV + K IWDTAGQE Sbjct: 24 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 83 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 RFH++ YYRG+ ++VYDIT SF + KW++ + EH E++ + GNKCD+ D Sbjct: 84 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 143 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180 R VP ++ A G ETSAK INIE+ F + I R+ P +P+ Sbjct: 144 REVPLKDAKEYAESIGAIVVETSAKNAINIEELF----QGISRQIPPLDPH 190 >1D5C-A nrPDB Length = 162 Score = 142 bits (359), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 72/154 (46%), Positives = 101/154 (65%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +KL+ +G+ VGKT ++ RF D F+ + STIGIDF KT+ L ++LQ+WDTAGQE Sbjct: 2 YKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQE 61 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 RF ++ SY R + ++VYDITN +SFEN +KW+++I +DV L+GNK D+ D Sbjct: 62 RFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGDL 121 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAF 163 R V +G Q A+E+ F ETSAKA NI+ F Sbjct: 122 RKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLF 155 >4G01-B nrPDB Length = 181 Score = 139 bits (350), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 66/167 (39%), Positives = 99/167 (59%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL+L+GD G GK+ ++ RF D F STIG F +T+ + +K +IWDTAGQER Sbjct: 14 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 73 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKR 130 +H++ YYRGA ++V+D+TN SFE KW++ + N ++ L GNK D+ D R Sbjct: 74 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 133 Query: 131 VVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK 177 V + A+E+G+ F ETSAK N+++ F +A + R P + Sbjct: 134 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTE 180 >2HEI-A nrPDB Length = 179 Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 67/172 (38%), Positives = 103/172 (59%), Gaps = 4/172 (2%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+L+G+S VGK+ ++ RF F+ STIG F ++V L +K +IWDTAGQE Sbjct: 9 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 68 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 R+H++ YYRGA ++VYDITN ++F W++ + A+ + L GNK D+ +K Sbjct: 69 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 128 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNS 181 R+V + + A ++ + F ETSAK +N+ FL +A +K P EP + Sbjct: 129 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIA----KKLPKSEPQN 176 >4PHF-A nrPDB Length = 184 Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 71/172 (41%), Positives = 110/172 (63%), Gaps = 7/172 (4%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIK-LQIWDTAG 67 + K++++GDSGVGKT ++ R+ +D ++ + +TIG DF K V + G K+ +Q+WDTAG Sbjct: 10 ILKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATMQVWDTAG 69 Query: 68 QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLGNK 123 QERF ++ ++YRGA +LVYD+TN SFENI W HAN E ++LGNK Sbjct: 70 QERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNK 129 Query: 124 CDMDD-KRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRK 173 D ++ K++V + +++A+ G I F TSAK IN++ AF +A L++ Sbjct: 130 IDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ 181 >1TU4-A nrPDB Length = 171 Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 64/161 (39%), Positives = 101/161 (62%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+L+G+S VGK+ ++ RF F+ STIG F +TV L +K +IWDTAGQE Sbjct: 8 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 67 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 R+H++ YYRGA ++VYDITN +SF W++ + A+ ++ L GNK D+ +K Sbjct: 68 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 127 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 R V + + A ++ + F ETSAK ++N+ + F+ +A+ + Sbjct: 128 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 168 >4CZ2-A nrPDB Length = 230 Score = 134 bits (338), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 119/206 (57%), Gaps = 9/206 (4%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK-IKLQI 62 +T + LFK+L+IG+ GVGKT ++ R+ F+ + +TIG+DF +K + + ++LQ+ Sbjct: 25 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 84 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERM 118 WD AG ERF +T YY+ AMG +V+DI+ +FE + KW ++D + + + Sbjct: 85 WDIAGLERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 144 Query: 119 LLGNKCDMDDKRVVPKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL---RKT 174 LL NKCD + + + +Q +EHG +FETSAK NINIE+A L E +L + Sbjct: 145 LLANKCDQNKDSSMSPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKMLVNHQSF 204 Query: 175 PVKEPNSENVDISSGGGVTGWKSKCC 200 P +E + + + + KS+CC Sbjct: 205 PNEENDVDKIKLDQETLRAENKSQCC 230 >1YVD-A nrPDB Length = 169 Score = 132 bits (333), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 66/166 (39%), Positives = 97/166 (58%), Gaps = 4/166 (2%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K+ L+GD+GVGK+ +++RF +D+F+ TIG F KTV+ Q + K IWDTAGQE Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 RF + YYRG+ ++VYDIT ++F + W+R + +H + + GNKCD+ D Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDV 125 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175 R V + + A F ETSAK INI + F+ +I R+ P Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFI----EISRRIP 167 >4KYI-B nrPDB Length = 170 Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 97/161 (60%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+L+G+S VGK+ ++ RF F+ STIG F +TV L +K +IWDTAG E Sbjct: 10 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLE 69 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 R+H++ YYRGA ++VYDITN +F W++ + A+ ++ L GNK D+ K Sbjct: 70 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 129 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 R V + + A ++ + F ETSAK +N+ + F+ +A+ + Sbjct: 130 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 170 >1EK0-A nrPDB Length = 170 Score = 130 bits (327), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 98/163 (60%), Gaps = 3/163 (1%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL+L+G++ VGK+ ++ RF + F TIG F + V + +K +IWDTAGQER Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 64 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDM---D 127 F ++ YYR A ++VYD+T +SF W++ + E A++D+ L+GNK DM Sbjct: 65 FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEG 124 Query: 128 DKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 +R V + +GE++A E G+ FFETSAK N+ FL + E I Sbjct: 125 GERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKI 167 >5YOZ-A nrPDB Length = 177 Score = 129 bits (324), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 64/161 (39%), Positives = 101/161 (62%), Gaps = 1/161 (0%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 K++++G+SG GK+ + RF+ + F +TIG F KTV + G+ +K +IWDTAG ER Sbjct: 17 KIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTAGLER 76 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKR 130 F ++ YYRGA G ++VYDITN +S + W++ + +A+ + +L+GNK D+ R Sbjct: 77 FRSLAPIYYRGASGALVVYDITNSESLKKAQTWIKELRANADPSLIIVLVGNKKDLGSLR 136 Query: 131 VVPKGKGEQIAREHGI-RFFETSAKANINIEKAFLTLAEDI 170 V G+++A E + F+E SAK N N+E+ FL LA + Sbjct: 137 QVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLAAKL 177 >6FF8-A nrPDB Length = 181 Score = 129 bits (323), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 68/174 (39%), Positives = 105/174 (60%), Gaps = 6/174 (3%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK-IKLQI 62 +T + LFK+L+IG+ GVGKT ++ R+ F+ + +TIG+DF +K + + ++LQ+ Sbjct: 3 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 62 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERM 118 WD AG ERF +T YY+ A+G +V+DI+ +FE + KW ++D + + + Sbjct: 63 WDIAGLERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 122 Query: 119 LLGNKCDMDDKRVVPKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171 LL NKCD + + +Q +EHG +FETSAK NINIE+A L E IL Sbjct: 123 LLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 176 >1YZU-A nrPDB Length = 170 Score = 128 bits (322), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 61/162 (37%), Positives = 100/162 (61%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FK++L+G+ VGKT ++ R+ ++ FN I+T+ F K + + GK++ L IWDTAGQE Sbjct: 7 FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQE 66 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 RFH + YYR + G +LVYDIT+ SF+ + W++ + + ++ ++GNK D++ + Sbjct: 67 RFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKE 126 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL 171 R V + E A G + + TSAK N IE+ FL L + ++ Sbjct: 127 RHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMI 168 >5LDD-C nrPDB Length = 207 Score = 127 bits (318), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 64/177 (36%), Positives = 111/177 (62%), Gaps = 6/177 (3%) Query: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67 +L K++++GDSGVGKT ++ ++ + F+ ++ +TIG DF + V + +++ +Q+WDTAG Sbjct: 9 VLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTAG 68 Query: 68 QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNK 123 QERF ++ ++YRGA +LV+D+ N KSF+ + W L E+ ++LG K Sbjct: 69 QERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPENFPFVVLGIK 128 Query: 124 CDMDD-KRVVPKGKGEQIAREH-GIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178 D+++ KRV+ + + + GI +FETSAK IN+E+AF +A + L + +E Sbjct: 129 IDVEESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNALMQEESEE 185 >6IYB-A nrPDB Length = 199 Score = 121 bits (303), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 62/170 (36%), Positives = 105/170 (61%), Gaps = 5/170 (2%) Query: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67 +L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V + + + +QIWDTAG Sbjct: 12 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 71 Query: 68 QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNK 123 ERF + ++YRGA +LV+D+T +F+ + W L E+ ++LGNK Sbjct: 72 LERFQS-GVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNK 130 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 D+++++V K ++ I +FETSAK IN+E+AF T+A + L++ Sbjct: 131 IDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 180 >1WMS-A nrPDB Length = 177 Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 63/175 (36%), Positives = 108/175 (61%), Gaps = 10/175 (5%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 LFK++L+GD GVGK+ ++ R+ + F+T TIG++F K +E+ G + +QIWDTAGQ Sbjct: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLGNKC 124 ERF ++ T +YRG+ +L + + + +SF+N+S W + +A+ E ++LGNK Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126 Query: 125 DMDDKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178 D+ +++V + + + R++G +FETSAK N+ AF E+ +R+ E Sbjct: 127 DISERQVSTE-EAQAWCRDNGDYPYFETSAKDATNVAAAF----EEAVRRVLATE 176 >1Z22-A nrPDB Length = 168 Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 57/167 (34%), Positives = 98/167 (58%), Gaps = 1/167 (0%) Query: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 ++ K++++G+ VGK+ ++ R+ F + TIG+DF + +++ + ++L +WDTA Sbjct: 3 EVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTA 62 Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDM 126 GQE F IT +YYRGA +LV+ T+ +SFE IS W + D+ L+ NK D+ Sbjct: 63 GQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVG-DIPTALVQNKIDL 121 Query: 127 DDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 D + + E +A+ +RF+ TS K ++N+ + F LAE L+K Sbjct: 122 LDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKHLQK 168 >4QXA-A nrPDB Length = 208 Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 62/181 (34%), Positives = 112/181 (61%), Gaps = 10/181 (5%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 LFK++L+GD GVGK+ ++ R+ + F++ TIG++F K +E+ G + +QIWDTAG Sbjct: 8 LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGL 67 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLGNKC 124 ERF ++ T +YRG+ +L + + + +SF+N+S W + +A+ E ++LGNK Sbjct: 68 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKT 127 Query: 125 DMDDKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSEN 183 D+ +++V + + + +++G +FETSAK + N+ AF E+ +R+ E SE+ Sbjct: 128 DIKERQVSTE-EAQAWCKDNGDYPYFETSAKDSTNVAAAF----EEAVRRILATEDRSEH 182 Query: 184 V 184 + Sbjct: 183 L 183 >2OCB-A nrPDB Length = 180 Score = 116 bits (290), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 59/168 (35%), Positives = 98/168 (58%), Gaps = 4/168 (2%) Query: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67 LL K++L+GD GVGK+ ++ R+ + F++ TIG++F + +E+ G+ + LQIWDTAG Sbjct: 6 LLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAG 65 Query: 68 QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLGNK 123 QERF ++ T +YRGA +L + + + +SFEN+ W + +A+ E ++LGNK Sbjct: 66 QERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNK 125 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL 171 D +D++V + + ETSAK + N+ AF +L Sbjct: 126 VDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVL 173 >5CLL-A nrPDB Length = 191 Score = 109 bits (272), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 58/179 (32%), Positives = 100/179 (55%), Gaps = 8/179 (4%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+L+GD G GKT + R F +++T+G++ IK +WDTAGQE Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 70 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 +F + YY A ++++D+T+ +++N+ W R++ E++ +L GNK D+ D+ Sbjct: 71 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDR 129 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISS 188 +V K K R+ +++++ SAK+N N EK FL LA + + +PN E V + + Sbjct: 130 KV--KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL-----IGDPNLEFVAMPA 181 >5UWI-A nrPDB Length = 237 Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 58/179 (32%), Positives = 100/179 (55%), Gaps = 8/179 (4%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+L+GD G GKT + R F +++T+G++ IK +WDTAGQE Sbjct: 32 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 91 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 +F + YY A ++++D+T+ +++N+ W R++ E++ +L GNK D+ D+ Sbjct: 92 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDR 150 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISS 188 +V K K R+ +++++ SAK+N N EK FL LA + + +PN E V + + Sbjct: 151 KV--KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL-----IGDPNLEFVAMPA 202 >2N1B-A nrPDB Length = 261 Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 58/179 (32%), Positives = 100/179 (55%), Gaps = 8/179 (4%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+L+GD G GKT + R F +++T+G++ IK +WDTAGQE Sbjct: 52 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 111 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 +F + YY A ++++D+T+ +++N+ W R++ E++ +L GNK D+ D+ Sbjct: 112 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDR 170 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISS 188 +V K K R+ +++++ SAK+N N EK FL LA + + +PN E V + + Sbjct: 171 KV--KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKL-----IGDPNLEFVAMPA 222 >5CM8-B nrPDB Length = 203 Score = 106 bits (264), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 59/168 (35%), Positives = 98/168 (58%), Gaps = 3/168 (1%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 L K++++G GVGK+ + +F D F + T ++ K V L G+++++ I DTAGQ Sbjct: 13 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEEVQIDILDTAGQ 71 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMD 127 E + I +Y+R G + V+ IT+ +SF+ ++ I N E + +L+GNKCD++ Sbjct: 72 EDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDLN 131 Query: 128 DKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL-RKT 174 DKR VP + + A++ + + ETSAK N++K F L +I RKT Sbjct: 132 DKRKVPLSECQLRAQQWAVPYVETSAKTRENVDKVFFDLMREIRSRKT 179 >3WYF-A nrPDB Length = 219 Score = 103 bits (256), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 93/161 (57%), Gaps = 3/161 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+L+GD G GKT + R F +I+TIG++ + +IK +WDTAG E Sbjct: 13 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGLE 72 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 +F + YY A ++++D+T+ +++N+ W R++ E++ +L GNK D+ ++ Sbjct: 73 KFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCGNKVDVKER 131 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 +V K K R+ +++++ SAK+N N EK FL LA + Sbjct: 132 KV--KAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 170 >5XOJ-A nrPDB Length = 182 Score = 103 bits (256), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 54/161 (33%), Positives = 93/161 (57%), Gaps = 3/161 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+L+GD G GKT + R F +I+TIG++ + +IK +WDTAG E Sbjct: 13 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGLE 72 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 +F + YY A ++++D+T+ +++N+ W R++ E++ +L GNK D+ ++ Sbjct: 73 KFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCGNKVDVKER 131 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 +V K K R+ +++++ SAK+N N EK FL LA + Sbjct: 132 KV--KAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 170 >4DXA-A nrPDB Length = 169 Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/165 (35%), Positives = 94/165 (56%), Gaps = 3/165 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +KL+++G GVGK+ + +F F + TI ++ K VE+ ++ L+I DTAG E Sbjct: 6 YKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDAQQCMLEILDTAGTE 64 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDD 128 +F + Y + G LVY IT +F ++ I + +DV +L+GNKCD++D Sbjct: 65 QFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLED 124 Query: 129 KRVVPKGKGEQIARE-HGIRFFETSAKANINIEKAFLTLAEDILR 172 +RVV K +G+ +AR+ + F E+SAK+ IN+ + F L I R Sbjct: 125 ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINR 169 >4M8N-E nrPDB Length = 199 Score = 100 bits (249), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 93/163 (57%), Gaps = 3/163 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +KL+++G GVGK+ + +F F + TI ++ K VE+ ++ L+I DTAG E Sbjct: 7 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDAQQCMLEILDTAGTE 65 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDD 128 +F + Y + G LVY IT +F ++ I + +DV +L+GNKCD++D Sbjct: 66 QFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLED 125 Query: 129 KRVVPKGKGEQIARE-HGIRFFETSAKANINIEKAFLTLAEDI 170 +RVV K +G+ +AR+ + F E+SAK+ IN+ + F L I Sbjct: 126 ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 168 >2KE5-A nrPDB Length = 174 Score = 99.8 bits (247), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 95/167 (56%), Gaps = 3/167 (1%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 L K++++G GVGK+ + +F D F + T ++ K V L G+++++ I DTAG Sbjct: 3 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEEVQIDILDTAGL 61 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANED-VERMLLGNKCDM 126 E + I +Y+R G +LV+ IT +SF +++ I A ED + +++GNK D+ Sbjct: 62 EDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDL 121 Query: 127 DDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 +++R VP + A E G+++ ETSAK N++K F L +I K Sbjct: 122 EERRQVPVEEARSKAEEWGVQYVETSAKTRANVDKVFFDLMREIRTK 168 >4DJT-A nrPDB Length = 218 Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/190 (30%), Positives = 99/190 (52%), Gaps = 8/190 (4%) Query: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIG-IDFKIKTVELQGKKIKLQIWDT 65 +L +K+ LIGD GVGKT + R D F + +T+G ++ + ++ QG IK +WDT Sbjct: 9 ELTYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDT 68 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQE+ + YY GA G +L +D+T+ + +N+++W++ + ++ NK D Sbjct: 69 AGQEKKAVLKDVYYIGASGAILFFDVTSRITCQNLARWVKEFQAVVGNEAPIVVCANKID 128 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA------EDILRKTPVK-E 178 + +++ + K ++ + +FE SAK N FL LA D++ + V E Sbjct: 129 IKNRQKISKKLVMEVLKGKNYEYFEISAKTAHNFGLPFLHLARIFTGRPDLIFVSNVNLE 188 Query: 179 PNSENVDISS 188 P N D S Sbjct: 189 PTEVNYDYHS 198 >3E5H-A nrPDB Length = 178 Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 4/166 (2%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGK-KIKLQIWDTAGQ 68 K++++GD GKT + F+ + F + TIG+DF ++ + L G + LQIWD GQ Sbjct: 7 LKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQ 66 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW---LRNIDEHANEDVERMLLGNKCD 125 + Y GA G++LVYDITN +SFEN+ W ++ + E + L+GNK D Sbjct: 67 TIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPLVALVGNKID 126 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL 171 ++ R + K + +E+G SAK ++ F +A +IL Sbjct: 127 LEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEIL 172 >1ZC4-A nrPDB Length = 175 Score = 93.6 bits (231), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 53/163 (32%), Positives = 90/163 (55%), Gaps = 2/163 (1%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 L K++++G GVGK+ + +F D F + T ++ K V L G+++++ I DTAG Sbjct: 6 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEEVQIDILDTAGL 64 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANEDVERMLLGNKCDMD 127 E + I +Y+R G + V+ IT +SF + + I +E+V +L+GNK D++ Sbjct: 65 EDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLE 124 Query: 128 DKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 DKR V + + A + + + ETSAK N++K F L +I Sbjct: 125 DKRQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREI 167 >2J1L-A nrPDB Length = 214 Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/175 (31%), Positives = 99/175 (56%), Gaps = 16/175 (9%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 K++L+GD G GKT +L F+D AF ++ T+ + + ++++GK + L IWDTAGQ+ Sbjct: 36 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV-NLQVKGKPVHLHIWDTAGQDD 94 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDM-DD 128 + + +Y A ++L +D+T+ SF+NI ++W ++ H + V +++G K D+ D Sbjct: 95 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLRKD 153 Query: 129 KRVVPK-----------GKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDIL 171 K +V K +G+++AR G + + E SA+ + N+ F AE L Sbjct: 154 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 208 >2WBL-C nrPDB Length = 180 Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 14/177 (7%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 K + +GD VGKTC+L ++ + F T ++ T+ +F V + G + L +WDTAGQ Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDM- 126 E ++ + YRGA +L + + + S+ENI KWL + +H + +L+G K D+ Sbjct: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPEL-KHYAPGIPIVLVGTKLDLR 123 Query: 127 DDKRV---------VPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRK 173 DDK+ + +GE++ + G +R+ E S+K N++ F T LR Sbjct: 124 DDKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVALRP 180 >5XC3-A nrPDB Length = 176 Score = 90.5 bits (223), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 45/119 (37%), Positives = 76/119 (63%), Gaps = 1/119 (0%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV-ELQGKKIKLQIWDTAGQ 68 +K++LIG SGVGK+ ++ +F + + TIG F K V GK +KL IWDTAGQ Sbjct: 6 YKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQ 65 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMD 127 ERF +IT YY ++G ++V+D+T+ +SF+++ W+ ++ + + +++ NK D+D Sbjct: 66 ERFRSITKMYYTNSLGCLVVFDVTDRESFDDVYYWINDLRINCHTTYYILVVANKIDID 124 >4KLZ-A nrPDB Length = 173 Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 2/165 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +KL+++G GVGK+ + +F F TI +KI+ + + + L I DTAGQ Sbjct: 6 YKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIR-IRIDDEPANLDILDTAGQA 64 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANEDVERMLLGNKCDMDD 128 F + Y R G ++ Y IT+ +SF + ++ + I +D +L+GNK D+ Sbjct: 65 EFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQ 124 Query: 129 KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 R V K +G +ARE FFETSA I+ F L +I RK Sbjct: 125 LRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRK 169 >3CLV-A nrPDB Length = 208 Score = 89.4 bits (220), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 40/200 (20%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGK------------- 56 +K +L+G+S VGK+ ++ R + D F+ +TIG F V L Sbjct: 8 YKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNEKNNN 67 Query: 57 ------------------------KIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDIT 92 IK IWDTAGQER+ +I YYRGA ++V+DI+ Sbjct: 68 INSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIVVFDIS 127 Query: 93 NGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETS 152 N + + W+ + +N + +L+ NK D +K V + ++ A+++ + F +TS Sbjct: 128 NSNTLDRAKTWVNQLKISSNYII--ILVANKID-KNKFQVDILEVQKYAQDNNLLFIQTS 184 Query: 153 AKANINIEKAFLTLAEDILR 172 AK NI+ F LAE+I + Sbjct: 185 AKTGTNIKNIFYMLAEEIYK 204 >2J0V-A nrPDB Length = 212 Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 12/180 (6%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 K + +GD VGKTC+L ++ + F T +I T+ +F V + G+ + L +WDTAGQ Sbjct: 9 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVAVDGQIVNLGLWDTAGQ 67 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDMD 127 E + + YRGA +L + + + S+EN+ KW+ + A +V +L+G K D+ Sbjct: 68 EDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFA-PNVPIVLVGTKLDLR 126 Query: 128 DKR--------VVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178 D + V+ +GE++ ++ G + E S+K N++ F T + +L+ KE Sbjct: 127 DDKGYLADHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRKE 186 >2ERY-A nrPDB Length = 172 Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 53/153 (34%), Positives = 84/153 (54%), Gaps = 3/153 (1%) Query: 22 KTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRG 81 K+ + +F F T + TI D K + + +L I DTAGQE F + Y R Sbjct: 18 KSALTIQFIQSYFVTDYDPTIE-DSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRT 76 Query: 82 AMGIMLVYDITNGKSFENISKWLRNIDEHANED-VERMLLGNKCDMDDKRVVPKGKGEQI 140 G +LV+ +T+ SFE I K+ R I + D +L+GNK D+D +R V + +G+Q+ Sbjct: 77 GEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQL 136 Query: 141 AREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 AR+ + + E SAK +N+++AF L ++RK Sbjct: 137 ARQLKVTYMEASAKIRMNVDQAFHELVR-VIRK 168 >5WDR-A nrPDB Length = 171 Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 2/162 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L+++G GVGK+ + + F T + TI ++ K V + + L I DTAGQE Sbjct: 8 YRLVVVGTGGVGKSALTIQLIQQHFVTEYDPTIEDSYR-KHVSIDDEACLLDILDTAGQE 66 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANED-VERMLLGNKCDMDD 128 + + Y R G + VY I + +S + I + I ++D V +L+GNKCD+++ Sbjct: 67 DYSAMRDQYMRTGEGFLCVYSIDSQQSLDEIHSFREQILRVKDQDEVPMILVGNKCDLEE 126 Query: 129 KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 R V G+ +A+ + I F ETSAK IN+E+AF L +I Sbjct: 127 HREVSTEAGQAVAKSYSIPFMETSAKKRINVEEAFYQLVREI 168 >5WDQ-A nrPDB Length = 170 Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 3/162 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +KL+++G GVGK+ + + + F + TI ++ K V + G+ L I DTAGQE Sbjct: 8 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 66 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANEDVERMLLGNKCDMDD 128 + + Y R G + V+ I N KSFE+I ++ I ++DV +L+GNKCD Sbjct: 67 EYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDA-A 125 Query: 129 KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 R V + + +AR +GI + ETSAK +E AF TL +I Sbjct: 126 ARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREI 167 >5ZHX-e nrPDB Length = 198 Score = 86.3 bits (212), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 16/167 (9%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL+++GD GKTC+L FS D F ++ T+ ++ + +E+ GK+++L +WDTAGQE Sbjct: 12 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 70 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMDD- 128 + + Y I++ + I + S ENI KW + +H +V +L+GNK D+ + Sbjct: 71 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRND 129 Query: 129 ---KRVVPKGKGEQIAREHG---------IRFFETSAKANINIEKAF 163 +R + K K E + E G + E SAK + + F Sbjct: 130 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 176 >5C2K-A nrPDB Length = 415 Score = 85.9 bits (211), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 87/167 (52%), Gaps = 16/167 (9%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL+++GD GKTC+L FS D F ++ T+ ++ + +E+ GK+++L +WDTAGQE Sbjct: 14 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 72 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMDD- 128 + + Y I++ + I + S ENI KW + +H +V +L+GNK D+ + Sbjct: 73 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRND 131 Query: 129 ---KRVVPKGKGEQIAREHG---------IRFFETSAKANINIEKAF 163 +R + K K E + E G + E SAK + + F Sbjct: 132 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 178 >3BWD-D nrPDB Length = 182 Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 91/167 (54%), Gaps = 14/167 (8%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 K + +GD VGKTC+L ++ + F T ++ T+ +F V + G + L +WDTAGQ Sbjct: 8 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGATVNLGLWDTAGQ 66 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDM- 126 E ++ + YRGA +L + + + S+EN+S KW+ + +H V +L+G K D+ Sbjct: 67 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPEL-KHYAPGVPIVLVGTKLDLR 125 Query: 127 DDKR-------VVP--KGKGEQIAREHGIR-FFETSAKANINIEKAF 163 DDK+ VP +GE++ + G + E S+K+ N++ F Sbjct: 126 DDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVF 172 >4KU4-A nrPDB Length = 206 Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 89/175 (50%), Gaps = 20/175 (11%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 K+ ++G+ GVGKT + + F+ T+ T+ ++ + V + G L+I DTAGQE Sbjct: 16 KIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCV-IDGIPSHLEILDTAGQEE 74 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWL-------RNIDEHANEDVER------ 117 + + + R ++V+D+T SFE + R +DE +R Sbjct: 75 YGALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQTKRKLDETRRHPGDRHPDDLP 134 Query: 118 ------MLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTL 166 +L+GNKCD+D +R V +G +A++ G F ETSAK N+E+AF ++ Sbjct: 135 FAPSLVVLVGNKCDLDTRREVGTLEGSSLAKKLGCGFVETSAKLGTNVEEAFFSV 189 >4WA7-A nrPDB Length = 170 Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 88/162 (54%), Gaps = 3/162 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +KL+++G GVGK+ + + + F + TI ++ K V + G+ L I DTAG E Sbjct: 5 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGLE 63 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANEDVERMLLGNKCDMDD 128 + + Y R G + V+ I N KSFE+I + I +EDV +L+GNKCD+ Sbjct: 64 EYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDL-P 122 Query: 129 KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 R V + + +AR +GI F ETSAK ++ AF TL +I Sbjct: 123 SRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREI 164 >5UHV-A nrPDB Length = 166 Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 57/162 (35%), Positives = 89/162 (54%), Gaps = 3/162 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +KL+++G GVGK+ + + + F + TI ++ K V + G+ L I DTAGQE Sbjct: 4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 62 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANEDVERMLLGNKCDMDD 128 + + Y R G + V+ I N KSF +I+ + I ++DV +L+GNKCD+ Sbjct: 63 EYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDL-P 121 Query: 129 KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 R V + ++A+ +GI F ETSAK +E AF TL +I Sbjct: 122 TRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREI 163 >2NTY-C nrPDB Length = 180 Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/167 (31%), Positives = 89/167 (53%), Gaps = 14/167 (8%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 K + +GD VGKTC+L ++ + F T ++ T+ +F V + G + L +WDTAGQ Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWDTAGQ 64 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDM- 126 E ++ + YRGA +L + + + S+EN++ KW+ + H V +L+G K D+ Sbjct: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLR 123 Query: 127 DDKR-------VVP--KGKGEQIAREHGIR-FFETSAKANINIEKAF 163 DDK+ VP +GE++ + G + E S+K N++ F Sbjct: 124 DDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVF 170 >3CON-A nrPDB Length = 190 Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/172 (34%), Positives = 95/172 (55%), Gaps = 4/172 (2%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +KL+++G GVGK+ + + + F + TI ++ K V + G+ L I DTAGQE Sbjct: 22 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 80 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANEDVERMLLGNKCDMDD 128 + + Y R G + V+ I N KSF +I+ + I ++DV +L+GNKCD+ Sbjct: 81 EYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDL-P 139 Query: 129 KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180 R V + ++A+ +GI F ETSAK +E AF TL +I R+ +K+ N Sbjct: 140 TRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREI-RQYRMKKLN 190 >2FV8-A nrPDB Length = 207 Score = 82.8 bits (203), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 16/177 (9%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL+++GD GKTC+L FS D F ++ T+ ++ + +E+ GK+++L +WDTAGQE Sbjct: 27 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 85 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDM-DD 128 + + Y I++ + + + S ENI KW+ + +H +V +L+ NK D+ D Sbjct: 86 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV-KHFCPNVPIILVANKKDLRSD 144 Query: 129 KRV---VPKGKGEQI----AREHGIR-----FFETSAKANINIEKAFLTLAEDILRK 173 + V + + K E + R +R + E SAK + + F T L+K Sbjct: 145 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQK 201 >2FN4-A nrPDB Length = 181 Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 2/161 (1%) Query: 22 KTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRG 81 K+ + +F F + + TI D K + G +L I DTAGQE F + Y R Sbjct: 22 KSALTIQFIQSYFVSDYDPTIE-DSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRA 80 Query: 82 AMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDDKRVVPKGKGEQI 140 G +LV+ I + +SF + K I + +D +L+GNK D++ +R VP+ + Sbjct: 81 GHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAF 140 Query: 141 AREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNS 181 H + +FE SAK +N+++AF L + + + P S Sbjct: 141 GASHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQEQELPPS 181 >3REG-A nrPDB Length = 194 Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/173 (29%), Positives = 92/173 (53%), Gaps = 6/173 (3%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K++++GD VGKTC+L FS T ++ T+ +F ++ + ++ L +WDTAGQE Sbjct: 24 LKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFS-HVMKYKNEEFILHLWDTAGQE 82 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDM-- 126 + + Y + ++L + + N SF+NIS KW I +H + + +L+G K D+ Sbjct: 83 EYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEI-KHYIDTAKTVLVGLKVDLRK 141 Query: 127 DDKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178 D V K +G+ + ++ G + + E S+ A I + + F + I PV + Sbjct: 142 DGSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCIFSNKPVPK 194 >5JCP-B nrPDB Length = 419 Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 16/167 (9%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL+++GD GKTC+L S D F ++ T+ ++ + +E+ GK+++L +WDTAGQE Sbjct: 245 KLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 303 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMDD- 128 + + Y I++ + I + S ENI KW + +H +V +L+GNK D+ + Sbjct: 304 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKDLRND 362 Query: 129 ---KRVVPKGKGEQIAREHG---------IRFFETSAKANINIEKAF 163 +R + K K E + E G + E SAK + + F Sbjct: 363 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVF 409 >2ATX-A nrPDB Length = 194 Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 93/177 (52%), Gaps = 16/177 (9%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60 MA L+ K +++GD VGKTC+L +++DAF ++ T+ D +V + GK+ L Sbjct: 10 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTV-FDHYAVSVTVGGKQYLL 68 Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERML 119 ++DTAGQE + + Y ++ + + N SF+N+ +W+ + E+A +V +L Sbjct: 69 GLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLL 127 Query: 120 LGNKCDM-DDKRVVPK-----------GKGEQIAREHG-IRFFETSAKANINIEKAF 163 +G + D+ DD + + + +G+++A+E G + E SA ++ F Sbjct: 128 IGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVF 184 >2ERX-A nrPDB Length = 172 Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 3/167 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +++ + G GVGK+ ++ RF F ++I T+ ++ + + LQI DT G Sbjct: 4 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYR-QVISCDKSICTLQITDTTGSH 62 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN--EDVERMLLGNKCDMD 127 +F + +LVY IT+ +S E + I E E + ML+GNKCD Sbjct: 63 QFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDES 122 Query: 128 DKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 R V + E +AR F ETSAK N N+++ F L R+T Sbjct: 123 PSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRRT 169 >4U5X-A nrPDB Length = 178 Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 14/176 (7%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 K + +GD VGKTC+L ++ + F T +I T+ +F V + G + L +WDTAG Sbjct: 5 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVSVDGSVVNLGLWDTAGL 63 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMD 127 E + + YRGA +L + + + S+EN+ KW+ + A V +L+G K D+ Sbjct: 64 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 122 Query: 128 DKR----------VVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILR 172 + R ++ +GE++ + G + + E S+K NI+ F T + +L+ Sbjct: 123 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 178 >3OES-A nrPDB Length = 201 Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 2/163 (1%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 K++++G VGKT + +F + F+ + T+ + K V L + L + DTAGQ+ Sbjct: 26 KVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYS-KIVTLGKDEFHLHLVDTAGQDE 84 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANEDVERMLLGNKCDMDDK 129 + + S+ G G +LVY +T+ SF+ I + + E H V +L+GNK D+ + Sbjct: 85 YSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVLVGNKADLSPE 144 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 R V +G+++A G F E+SA+ N + F + ++I R Sbjct: 145 REVQAVEGKKLAESWGATFMESSARENQLTQGIFTKVIQEIAR 187 >3TH5-A nrPDB Length = 204 Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 84/167 (50%), Gaps = 16/167 (9%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 K +++GD VGKTC+L ++ +AF +I T+ D V + GK + L +WDTAGQE Sbjct: 32 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTAGQED 90 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDM-DD 128 + + Y ++ + + + SFEN+ +KW + H + +L+G K D+ DD Sbjct: 91 YDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHC-PNTPIILVGTKLDLRDD 149 Query: 129 KRVVPKGK-----------GEQIAREHG-IRFFETSAKANINIEKAF 163 K + K K G +A+E G +++ E SA ++ F Sbjct: 150 KDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVF 196 >4MIT-A nrPDB Length = 186 Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 16/168 (9%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 KL+++GD VGKTC+L +S F +I T+ D + ++ ++I+L +WDTAG E Sbjct: 11 IKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTV-FDNYVVSLTAGTRQIQLALWDTAGLE 69 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFEN-ISKWLRNIDEHANEDVERMLLGNKCDMDD 128 + + Y A ++ + +T+ S++N I+KW + H V +L+G K D + Sbjct: 70 EYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVI-HFAPKVPIILVGTKLDTRN 128 Query: 129 -----KRVVPKG-------KGEQIA-REHGIRFFETSAKANINIEKAF 163 KR+ +G KGE++ R +++ E SAK + N++ F Sbjct: 129 DPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVF 176 >5C1S-A nrPDB Length = 391 Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 52/163 (31%), Positives = 92/163 (56%), Gaps = 9/163 (5%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 +LL++G SGVGKT + D F + S G + + K V++ I++ I D AGQ+ Sbjct: 64 RLLVVGSSGVGKTTLC-----DCFFESHQSQ-GEETREKHVQIDNDFIRISISDIAGQQS 117 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDMDDK 129 F+ Y G I+++YDIT KSF ++ + WL +I + N D + +++GNK D + Sbjct: 118 FYACDNPY-DGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIGNKKDQEID 176 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 R++ + + EQ A++ +F+E S K + + + F ++ D L+ Sbjct: 177 RIITRKEAEQFAQDRLCQFYEISTKDD-SCQLLFDCISRDFLQ 218 Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 6/165 (3%) Query: 7 DLLFKLLLIGDSGVGKTCVLFRFS-DDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 D+ ++L++GD VGKT + +F+ D F++ I F E++ K ++ + D Sbjct: 220 DIKIRMLMVGDQNVGKTTFIRKFALQDPTGHDFMNAITTRF-----EMEKIKYEIIMIDW 274 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 + + R I++VYDITN +SF+NI + + + DV +++G K D Sbjct: 275 GFYNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAGVIVGYKTD 334 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 ++ +R + G +A G ++ E S+K + LA I Sbjct: 335 LEAQRKITMGDALTLADWLGYKYVEMSSKDTEDHSSIIKALAHSI 379 >2ATV-A nrPDB Length = 196 Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 6/170 (3%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL + G +GVGK+ ++ RF F + T+ ++ + + + + ++I DTAGQE Sbjct: 30 KLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQAT-IDDEVVSMEILDTAGQE- 87 Query: 71 FHTITTS-YYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANEDVERMLLGNKCDMDD 128 TI + R G +LVYDIT+ SFE + +DE ++V +L+GNK D+D Sbjct: 88 -DTIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDH 146 Query: 129 KRVVPKGKGEQIAREHGIRFFETSA-KANINIEKAFLTLAEDILRKTPVK 177 R V +GE++A E F+E SA NI + F L ++ R+ V+ Sbjct: 147 SRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVRRRRMVQ 196 >3RYT-C nrPDB Length = 180 Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 16/168 (9%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K +++GD VGKTC+L ++ +AF +I T+ D V + GK + L +WDTAG E Sbjct: 7 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTAGLE 65 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDM-D 127 + + Y ++ + + + SFEN+ +KW + H + +L+G K D+ D Sbjct: 66 DYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHC-PNTPIILVGTKLDLRD 124 Query: 128 DKRVVPKGK-----------GEQIAREHG-IRFFETSAKANINIEKAF 163 DK + K K G +A+E G +++ E SA ++ F Sbjct: 125 DKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVF 172 >5ZVP-A nrPDB Length = 181 Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 88/168 (52%), Gaps = 18/168 (10%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL+++GD GKTC+L S F ++ T+ ++ + VE+ GK ++L +WDTAGQE Sbjct: 7 KLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENY-VADVEVDGKHVELALWDTAGQED 65 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDM--- 126 + + Y + I++ + I + S +N+ KW+ + H + + +L+G K D+ Sbjct: 66 YDRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEV-LHFCQGLPIILVGCKKDLRHD 124 Query: 127 ----------DDKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAF 163 K V P+ +GE++ ++ G ++ E SA+ N + + F Sbjct: 125 PKTIEELHKTSQKPVTPE-QGEEVRKKIGAYKYLECSARTNEGVREVF 171 >3A58-B nrPDB Length = 188 Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 86/167 (51%), Gaps = 16/167 (9%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL+++GD GKTC+L S F ++ T+ ++ + VE+ G++++L +WDTAGQE Sbjct: 12 KLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDM--- 126 + + Y + +++ + I S EN+ KW+ + H + V +L+G K D+ Sbjct: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV-LHFCQGVPIILVGCKVDLRND 129 Query: 127 ---------DDKRVVPKGKGEQIAREHGIR-FFETSAKANINIEKAF 163 + ++ V +G+ +A + G ++E SAK + + F Sbjct: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVF 176 >1RYH-A nrPDB Length = 203 Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 35/200 (17%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K +++GD VGKTC+L ++ +AF +I T+ D V + GK + L +WDTAGQE Sbjct: 6 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTAGQE 64 Query: 70 RFHTITTSYYRGAMG-------------------IMLVYDITNGKSFENI-SKWLRNIDE 109 + + Y +G ++ + + + SFEN+ +KW + Sbjct: 65 DYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEVRH 124 Query: 110 HANEDVERMLLGNKCDM-DDKRVVPKGK-----------GEQIAREHG-IRFFETSAKAN 156 H + +L+G K D+ DDK + K K G +A+E G +++ E SA Sbjct: 125 HC-PNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQ 183 Query: 157 INIEKAFLTLAEDILRKTPV 176 ++ F +L PV Sbjct: 184 RGLKTVFDEAIRAVLCPPPV 203 >2W2X-A nrPDB Length = 185 Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 16/168 (9%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K +++GD VGKTC+L ++ +AF +I T+ D V + K + L +WDTAGQE Sbjct: 10 IKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDSKPVNLGLWDTAGQE 68 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDM-D 127 + + Y ++ + + + S+EN+ +KW + H +L+G K D+ D Sbjct: 69 DYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHC-PSTPIILVGTKLDLRD 127 Query: 128 DKRVVPKGK-----------GEQIARE-HGIRFFETSAKANINIEKAF 163 DK + K K G +A+E +++ E SA ++ F Sbjct: 128 DKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVF 175 >2Q3H-A nrPDB Length = 201 Score = 73.6 bits (179), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 20/169 (11%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 K +L+GD VGKT ++ ++ + + T +I T +F V + G+ ++LQ+ DTAGQ+ Sbjct: 22 KCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFS-AVVSVDGRPVRLQLCDTAGQDE 80 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHA--------------NEDV 115 F + Y +L + + + SF+N+S KW+ I H EDV Sbjct: 81 FDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDV 140 Query: 116 ERMLLGNKCDMDDKRVVPKGKGEQIARE-HGIRFFETSAKANINIEKAF 163 + ++ +KC ++ VP+ + +A E + E SA N+++ F Sbjct: 141 KVLIELDKC---KEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVF 186 >3T5G-A nrPDB Length = 181 Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 17/190 (8%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 K+ ++G VGK+ + +F + F ++ TI F K + + G++ LQ+ DTAGQ+ Sbjct: 8 KIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFT-KLITVNGQEYHLQLVDTAGQDE 66 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWL-RNIDEHANEDVERMLLGNKCDMDDK 129 + +Y G +LVY +T+ KSFE I + +D + ML+GNK D+ + Sbjct: 67 YSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHME 126 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISSG 189 RV+ +G+ +A F E+SAK N A D+ R+ ++ +E +D Sbjct: 127 RVISYEEGKALAESWNAAFLESSAKEN--------QTAVDVFRRIILE---AEKMD---- 171 Query: 190 GGVTGWKSKC 199 G + KS C Sbjct: 172 GACSQGKSSC 181 >3PIR-A nrPDB Length = 183 Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 92/169 (54%), Gaps = 9/169 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +KL+++GD GVGK+ + +F F + TI D +K E+ + L + DTAGQE Sbjct: 19 YKLVVVGDGGVGKSALTIQFFQKIFVPEYDPTIE-DSYLKHTEIDNQWAILDVLDTAGQE 77 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKCD 125 F + Y R G ++VY +T+ SFE++ ++ LR D E +L+ NK D Sbjct: 78 EFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKD---RESFPMILVANKVD 134 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAK-ANINIEKAFLTLAEDILRK 173 + R V + +G+++A ++ I + ETSAK +N++K F L I ++ Sbjct: 135 LMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQ 183 >2WKQ-A nrPDB Length = 332 Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 16/169 (9%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 L K +++GD VGKTC+L ++ +AF +I T+ D V + GK + L +WDTAG Sbjct: 155 LIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVDGKPVNLGLWDTAGL 213 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDM- 126 E + + Y ++ + + + SF ++ +KW + H + +L+G K D+ Sbjct: 214 EDYDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHC-PNTPIILVGTKLDLR 272 Query: 127 DDKRVVPKGK-----------GEQIAREHG-IRFFETSAKANINIEKAF 163 DDK + K K G +A+E G +++ E SA ++ F Sbjct: 273 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVF 321 >3VHL-B nrPDB Length = 195 Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 21/184 (11%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 K +++GD VGK C+L ++ + F + ++ T+ ++ + TV + G+ L ++DTAGQE Sbjct: 12 KCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 70 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDMDD- 128 + + Y ++ + + + SFEN+ KW+ I H + +L+G + D+ D Sbjct: 71 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPK-TPFLLVGTQIDLRDD 129 Query: 129 ------------KRVVPKGKGEQIARE-HGIRFFETSAKANINIEKAFLTLAEDILRKTP 175 K + P+ E++AR+ +++ E SA ++ F E IL Sbjct: 130 PSTIEKLAKNKQKPITPE-TAEKLARDLKAVKYVECSALTQKGLKNVF---DEAILAALE 185 Query: 176 VKEP 179 EP Sbjct: 186 PPEP 189 >3RAP-R nrPDB Length = 167 Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 4/144 (2%) Query: 22 KTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRG 81 K+ + +F F + TI DF K +E+ L+I DTAG E+F ++ Y + Sbjct: 16 KSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKN 74 Query: 82 AMGIMLVYDITNGKSFENISKWLRN--IDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQ 139 G +LVY + N +SF++I K +R+ I E V +L+GNK D++ +R V +G Sbjct: 75 GQGFILVYSLVNQQSFQDI-KPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSSEGRA 133 Query: 140 IAREHGIRFFETSAKANINIEKAF 163 +A E G F ETSAK+ +++ F Sbjct: 134 LAEEWGCPFMETSAKSKTMVDELF 157 >2GF0-A nrPDB Length = 199 Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 4/147 (2%) Query: 22 KTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRG 81 K+ ++ RF F T+I TI ++ + + LQI DT G +F + Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYR-QVISCDKSVCTLQITDTTGSHQFPAMQRLSISK 79 Query: 82 AMGIMLVYDITNGKSFENISKWLRNIDE--HANEDVERMLLGNKCDMDDKRVVPKGKGEQ 139 +LV+ +T+ +S E + + I + + ED+ ML+GNKCD + +R V + + Sbjct: 80 GHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCD-ETQREVDTREAQA 138 Query: 140 IAREHGIRFFETSAKANINIEKAFLTL 166 +A+E F ETSAK N N+++ F L Sbjct: 139 VAQEWKCAFMETSAKMNYNVKELFQEL 165 >5VCU-A nrPDB Length = 208 Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 18/190 (9%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K +++GD VGKT +L +S F ++ T+ ++ K + + + ++DTAGQE Sbjct: 12 IKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYN-KNIPYGDGIVSIALYDTAGQE 70 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDM-D 127 + + Y ++ + + N S EN SKW + +H N D +L+G K D+ Sbjct: 71 DYDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEEL-KHYNPDTPIVLVGTKLDLKK 129 Query: 128 DKRVVPKGKGEQIAR---EHGIR---------FFETSAKANINIEKAFLTLAEDILRKTP 175 D+ V K K ++I+ E G + E SAK N+ +AF +A DI K Sbjct: 130 DEEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAF-NMAIDIAMKQR 188 Query: 176 VKE-PNSENV 184 +K+ P + N Sbjct: 189 LKDAPPTANA 198 >1M7B-A nrPDB Length = 184 Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 66/117 (56%), Gaps = 3/117 (2%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 K++++GDS GKT +L F+ D F ++ T+ ++ + E+ ++I+L +WDT+G Sbjct: 9 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYT-ASFEIDTQRIELSLWDTSGSPY 67 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDM 126 + + Y + +++ +DI+ ++ +++ KW I E + + +L+G K D+ Sbjct: 68 YDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFC-PNTKMLLVGCKSDL 123 >1GWN-A nrPDB Length = 205 Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 66/117 (56%), Gaps = 3/117 (2%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 K++++GDS GKT +L F+ D F ++ T+ ++ + E+ ++I+L +WDT+G Sbjct: 30 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYT-ASFEIDTQRIELSLWDTSGSPY 88 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDM 126 + + Y + +++ +DI+ ++ +++ KW I E + + +L+G K D+ Sbjct: 89 YDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFC-PNTKMLLVGCKSDL 144 >2YC4-C nrPDB Length = 208 Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 44/178 (24%), Positives = 88/178 (49%), Gaps = 11/178 (6%) Query: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSD--DAFNTTFISTIGIDFKIKTVELQGKKIKLQI 62 T L K+ ++G++ VGK+ ++ F+ F + T G++ + V + + +++ Sbjct: 16 TATLRCKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVEL 75 Query: 63 W--DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVER--- 117 + DTAG + + + Y+ G +LV+D+++ +SFE+ W + + A D ER Sbjct: 76 FLLDTAGSDLYKEQISQYWNGVYYAILVFDVSSMESFESCKAWFELL-KSARPDRERPLR 134 Query: 118 -MLLGNKCDMDDKR-VVPKGKGEQIAREHGIRFFETSA-KANINIEKAFLTLAEDILR 172 +L+ NK D+ +R V + A + + FF+ SA + + FL++A R Sbjct: 135 AVLVANKTDLPPQRHQVRLDMAQDWATTNTLDFFDVSANPPGKDADAPFLSIATTFYR 192 >2REX-B nrPDB Length = 197 Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 29/117 (24%), Positives = 64/117 (54%), Gaps = 3/117 (2%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL+L+GD GKT +L + D + T++ T+ ++ +E + ++++L +WDT+G Sbjct: 12 KLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYT-ACLETEEQRVELSLWDTSGSPY 70 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFEN-ISKWLRNIDEHANEDVERMLLGNKCDM 126 + + Y + ++L +DI+ ++ ++ + KW I ++ +L+G K D+ Sbjct: 71 YDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYC-PSTRVLLIGCKTDL 126 >2NZJ-A nrPDB Length = 175 Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 8/160 (5%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 L++++L+GD GVGKT + F+ +G D +T+ + G+ L + DT Sbjct: 4 LYRVVLLGDPGVGKTSLASLFAGKQ-ERDLHEQLGEDVYERTLTVDGEDTTLVVVDTWEA 62 Query: 69 ERFHTITT--SYYRGAMGIMLVYDITNGKSFENISKW---LRNIDEHANEDVERMLLGNK 123 E+ + S +G ++VY I + SFE+ S+ LR H + V +L+GNK Sbjct: 63 EKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRT--HQADHVPIILVGNK 120 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAF 163 D+ R V +G A +F ETSA N+ + F Sbjct: 121 ADLARCREVSVEEGRACAVVFDCKFIETSATLQHNVAELF 160 >5NZV-F nrPDB Length = 181 Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 17/136 (12%) Query: 2 AKKTYDLLF-----KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGK 56 A K + LF ++L++G G GKT VL++ TT I TIG F ++TV Q K Sbjct: 5 ASKLFSNLFGNKEMRILMVGLDGAGKTTVLYKLKLGEVITT-IPTIG--FNVETV--QYK 59 Query: 57 KIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITN----GKSFENISKWLRNIDEHAN 112 I +WD GQ+R ++ YYR G++ V D + G++ E + + L N DE N Sbjct: 60 NISFTVWDVGGQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRML-NEDELRN 118 Query: 113 EDVERMLLGNKCDMDD 128 ++ NK D+ + Sbjct: 119 --AAWLVFANKQDLPE 132 >3D6T-B nrPDB Length = 171 Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 70/130 (53%), Gaps = 13/130 (10%) Query: 10 FKLLLIGDSGVGKTCVLFRF-----SDDAFNTTFISTIGIDFKIKTVELQGKK---IKLQ 61 KL+++G++G GKT +L + SD + +T+GID K ++++ K+ + L Sbjct: 1 MKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQS---ATVGIDVKDWPIQIRDKRKRDLVLN 57 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKS-FENISKWLRNIDEHANEDVERMLL 120 +WD AG+E F++ + + VYD++ G++ + + WL NI A+ +L+ Sbjct: 58 VWDFAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSS-PVILV 116 Query: 121 GNKCDMDDKR 130 G D+ D++ Sbjct: 117 GTHLDVSDEK 126 >2G3Y-A nrPDB Length = 211 Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 92/188 (48%), Gaps = 13/188 (6%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCV--LFRFSDDAFNTTFISTIGIDFKIKTVELQGKK- 57 ++ ++ + ++++LIG+ GVGK+ + +F D+ ++ +G D +T+ + G+ Sbjct: 29 ISSESGNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSD-CEVLGEDTYERTLMVDGESA 87 Query: 58 --IKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW---LRNIDEHAN 112 I L +W+ G+ + + + ++VY IT+ SFE S+ LR + Sbjct: 88 TIILLDMWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQ--T 143 Query: 113 EDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 ED+ +L+GNK D+ R V +G A +F ETSA N+++ F + + Sbjct: 144 EDIPIILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRL 203 Query: 173 KTPVKEPN 180 + KE N Sbjct: 204 RRDSKEKN 211 >2CJW-A nrPDB Length = 192 Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 13/179 (7%) Query: 10 FKLLLIGDSGVGKTCV--LFRFSDDAFNTTFISTIGIDFKIKTVELQGKK---IKLQIWD 64 ++++LIG+ GVGK+ + +F D+ ++ +G D +T+ + G+ I L +W+ Sbjct: 7 YRVVLIGEQGVGKSTLANIFAGVHDSMDSD-CEVLGEDTYERTLMVDGESATIILLDMWE 65 Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW---LRNIDEHANEDVERMLLG 121 G+ + + + ++VY IT+ SFE S+ LR + ED+ +L+G Sbjct: 66 NKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQ--TEDIPIILVG 121 Query: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180 NK D+ R V +G A +F ETSA N+++ F + + + KE N Sbjct: 122 NKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRRDSKEKN 180 >3LVQ-E nrPDB Length = 497 Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 6/120 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I T+G F ++TV K +K +WD GQ+ Sbjct: 323 MRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY--KNVKFNVWDVGGQD 377 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWL-RNIDEHANEDVERMLLGNKCDMDD 128 + + YY G G++ V D + + + L R I++ D ++ NK D+ D Sbjct: 378 KIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPD 437 >2A5F-A nrPDB Length = 175 Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 6/120 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I T+G F ++TV K +K +WD GQ+ Sbjct: 14 MRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY--KNVKFNVWDVGGQD 68 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWL-RNIDEHANEDVERMLLGNKCDMDD 128 + + YY G G++ V D + + + L R I++ D ++ NK D+ D Sbjct: 69 KIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPD 128 >4ILE-A nrPDB Length = 184 Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 10/161 (6%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +L L+G GKT + + FN I T+G + + ++ + +++WD GQ Sbjct: 23 MELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMR----KITKGNVTIKLWDIGGQP 78 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRN-IDEHANEDVERMLLGNKCD--- 125 RF ++ Y RG I+ + D + + E L N +D+ + + ++LGNK D Sbjct: 79 RFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPG 138 Query: 126 -MDDKRVVPKGKGEQIA-REHGIRFFETSAKANINIEKAFL 164 +D+K ++ K I RE K NI+I +L Sbjct: 139 ALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 179 >2AL7-A nrPDB Length = 186 Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 10/161 (6%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +L L+G GKT + + F+ I T+G + + ++ + ++IWD GQ Sbjct: 23 MELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMR----KVTKGNVTIKIWDIGGQP 78 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRN-IDEHANEDVERMLLGNKCD--- 125 RF ++ Y RG I+ + D + + E L N +D+ + + ++LGNK D Sbjct: 79 RFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPN 138 Query: 126 -MDDKRVVPKGKGEQIA-REHGIRFFETSAKANINIEKAFL 164 +D+K+++ K I RE K NI+I +L Sbjct: 139 ALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 179 >1Z6X-A nrPDB Length = 180 Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 10/128 (7%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I TIG F ++TVE K I +WD GQ+ Sbjct: 18 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNICFTVWDVGGQD 72 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRN---IDEHANEDVERMLLGNKCDM 126 R + Y++ G++ V D + + + ++ L+ +DE D +L NK D+ Sbjct: 73 RIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDEL--RDAVLLLFANKQDL 130 Query: 127 DDKRVVPK 134 + + + Sbjct: 131 PNAMAISE 138 >6BBQ-A nrPDB Length = 520 Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 6/120 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I T+G F ++TV K +K +WD G + Sbjct: 360 MRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY--KNVKFNVWDVGGLD 414 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWL-RNIDEHANEDVERMLLGNKCDMDD 128 + + YY G G++ V D + + + L R I++ D ++ NK D+ D Sbjct: 415 KIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPD 474 >3LRP-A nrPDB Length = 181 Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 6/117 (5%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 ++L++G GKT +L++ TT I TIG F ++TVE + I +WD GQ++ Sbjct: 19 RILMVGLDAAGKTTILYKVKLGEVVTT-IPTIG--FNVETVEF--RNISFTVWDVGGQDK 73 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWL-RNIDEHANEDVERMLLGNKCDM 126 + YY G++ V D + + ++ + L R I+E +D ++ NK D+ Sbjct: 74 IRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDL 130 >3O47-A nrPDB Length = 329 Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 6/120 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I TIG F ++TVE K I +WD GQ+ Sbjct: 166 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDVGGQD 220 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSF-ENISKWLRNIDEHANEDVERMLLGNKCDMDD 128 + + Y++ G++ V D + + E + +R + E D ++ NK D+ + Sbjct: 221 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 280 >5UF8-A nrPDB Length = 181 Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 12/123 (9%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I TIG F ++TVE K I +WD GQ+ Sbjct: 18 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDVGGQD 72 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVER----MLLGNKCD 125 + + Y++ GI+ V D +N + + I++ + + NED R ++ NK D Sbjct: 73 KIRPLWRYYFQNTQGIIFVVD-SNDR--DRIAEAREELQQMLNEDELRDALLLVFANKQD 129 Query: 126 MDD 128 + + Sbjct: 130 LPN 132 >4YLG-A nrPDB Length = 173 Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 12/121 (9%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I TIG F ++TVE K I +WD GQ+ Sbjct: 14 MRILMVGLDAAGKTSILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDVGGQD 68 Query: 70 RFHTITTSYYRGAMGIMLVYDITN----GKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 + + YY+ I+ V D + G++ E + K L N DE N + ++ NK D Sbjct: 69 KIRPLWRHYYQNTQAIIFVVDSNDRDRIGEAREELMKML-NEDEMRNAIL--LVFANKHD 125 Query: 126 M 126 + Sbjct: 126 L 126 >6FAE-B nrPDB Length = 213 Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 6/120 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I TIG F ++TVE K I +WD GQ+ Sbjct: 50 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDVGGQD 104 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSF-ENISKWLRNIDEHANEDVERMLLGNKCDMDD 128 + + Y++ G++ V D + + E + +R + E D ++ NK D+ + Sbjct: 105 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 164 >2B6H-A nrPDB Length = 192 Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 6/124 (4%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I TIG F ++TVE K I +WD GQ+ Sbjct: 30 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNICFTVWDVGGQD 84 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRN-IDEHANEDVERMLLGNKCDMDD 128 + + Y++ G++ V D + + + + L+ + E D ++ NK DM + Sbjct: 85 KIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPN 144 Query: 129 KRVV 132 V Sbjct: 145 AMPV 148 >3AQ4-A nrPDB Length = 184 Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 6/120 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I TIG F ++TVE K I +WD GQ+ Sbjct: 21 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDVGGQD 75 Query: 70 RFHTITTSYYRGAMGIMLVYDITN-GKSFENISKWLRNIDEHANEDVERMLLGNKCDMDD 128 + + Y++ G++ V D + + E + R ++E D ++ NK D+ + Sbjct: 76 KIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPN 135 >1MOZ-A nrPDB Length = 183 Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 6/117 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G G GKT +L+R TT TIG F ++T L K +KL +WD GQ Sbjct: 19 LRILILGLDGAGKTTILYRLQIGEVVTTK-PTIG--FNVET--LSYKNLKLNVWDLGGQT 73 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLR-NIDEHANEDVERMLLGNKCD 125 YY ++ V D T+ SK L + E +D ++ NK D Sbjct: 74 SIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQD 130 >3CBQ-A nrPDB Length = 195 Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 12/164 (7%) Query: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL---QIW 63 D +FK++L+G+SGVGK+ + F ++ D + + + +++ L IW Sbjct: 21 DGIFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVVYDIW 80 Query: 64 ---DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANEDVERML 119 D G R H + T ++V+ +T+ +SF + + L + + D+ +L Sbjct: 81 EQGDAGGWLRDHCLQT-----GDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVIL 135 Query: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAF 163 +GNK D+ R V +G +A + ETSA + N + F Sbjct: 136 VGNKSDLARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELF 179 >3Q72-A nrPDB Length = 166 Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 8/169 (4%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 ++K+LL+G GVGK+ L R + G + +++ + G++ L ++D Q Sbjct: 2 VYKVLLLGAPGVGKSA-LARIFGGVEDGPEAEAAGHTYD-RSIVVDGEEASLMVYDIWEQ 59 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW---LRNIDEHANEDVERMLLGNKCD 125 + + ++VY +T+ SFE S+ LR + +DV +L+GNK D Sbjct: 60 DGGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQ--TDDVPIILVGNKSD 117 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI-LRK 173 + R V +G A +F ETSA + N++ F + I LR+ Sbjct: 118 LVRSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQIRLRR 166 >3C5C-A nrPDB Length = 187 Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 7/146 (4%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIK-TVELQGKKIKLQIWDTAGQER 70 L ++G G GK+ + +F F + + + + + TV+ Q + L++ DTA + Sbjct: 24 LAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQ--PVHLRVMDTADLDT 81 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANE---DVERMLLGNKCDMD 127 Y A ++VY + + +SF++ S +L + HA E + +LLGNK DM Sbjct: 82 PRN-CERYLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLGNKLDMA 140 Query: 128 DKRVVPKGKGEQIAREHGIRFFETSA 153 R V K +G +A G FFE SA Sbjct: 141 QYRQVTKAEGVALAGRFGCLFFEVSA 166 >5HZH-A nrPDB Length = 332 Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 15/134 (11%) Query: 44 IDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENI-SK 102 ID K + GK + L +WDTAG E + + Y ++ + + + SFEN+ +K Sbjct: 189 IDEAAKELGSGGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAK 248 Query: 103 WLRNIDEHANEDVERMLLGNKCDM-DDKRVVPKGK-----------GEQIAREHG-IRFF 149 W + H + +L+G K D+ DDK + K K G +A+E G +++ Sbjct: 249 WYPEVRHHC-PNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYL 307 Query: 150 ETSAKANINIEKAF 163 E SA ++ F Sbjct: 308 ECSALTQRGLKTVF 321 Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust. Identities = 13/33 (39%), Positives = 22/33 (66%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTI 42 K +++GD VGKTC+L ++ +AF +I T+ Sbjct: 7 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV 39 >1KSG-A nrPDB Length = 186 Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 5/98 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +LL++G GKT +L +F+ + +T T+G F IKT+E +G KL IWD GQ+ Sbjct: 19 LRLLMLGLDNAGKTTILKKFNGEDVDT-ISPTLG--FNIKTLEHRG--FKLNIWDVGGQK 73 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107 + +Y+ G++ V D + + ++ + L+++ Sbjct: 74 SLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSL 111 >6DFF-C nrPDB Length = 193 Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 6/120 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I TIG F ++TVE K I +WD G + Sbjct: 30 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDVGGLD 84 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSF-ENISKWLRNIDEHANEDVERMLLGNKCDMDD 128 + + Y++ G++ V D + + E + +R + E D ++ NK D+ + Sbjct: 85 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 144 >1J2J-A nrPDB Length = 166 Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 6/120 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I TIG F ++TVE K I +WD G + Sbjct: 3 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDVGGLD 57 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSF-ENISKWLRNIDEHANEDVERMLLGNKCDMDD 128 + + Y++ G++ V D + + E + +R + E D ++ NK D+ + Sbjct: 58 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 117 >4WNR-A nrPDB Length = 349 Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 3/97 (3%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 K+LL+GD GKT +L R + F+ T GI+ K + + K+IK+ WD GQE Sbjct: 43 KVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIKVNFWDFGGQEI 102 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI 107 H + +LV D + E WL++I Sbjct: 103 MHATHQFFLSKRSLYILVLD---SRRDEKAEYWLKHI 136 >3Q85-A nrPDB Length = 169 Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 24/168 (14%) Query: 9 LFKLLLIGDSGVGKTCVLFRFS----DDAFNT-----TFISTIGIDFKIKTVELQGKKIK 59 +FK++L+G+SGVGK+ + F D A T+ I +D + T+ I Sbjct: 2 VFKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTL------IV 55 Query: 60 LQIW---DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANEDV 115 IW D G + H + T ++V+ +T+ +SF + + L + + D+ Sbjct: 56 YDIWEQGDAGGWLQDHCLQT-----GDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDL 110 Query: 116 ERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAF 163 +L+GNK D+ R V +G +A + ETSA + N + F Sbjct: 111 PVILVGNKSDLARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELF 158 >5EE5-B nrPDB Length = 171 Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 9/165 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G G GKT +L+R TT I TIG F ++TV K +K Q+WD G Sbjct: 8 MRILILGLDGAGKTTILYRLQVGEVVTT-IPTIG--FNVETVTY--KNLKFQVWDLGGLT 62 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFE-NISKWLRNIDEHANEDVERMLLGNKCDMDD 128 YY ++ V D + + S+ + ++E ++ NK DM+ Sbjct: 63 SIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQ 122 Query: 129 KRV---VPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 + G ++ + F+TSA +++A L E + Sbjct: 123 AMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETL 167 >4C0K-A nrPDB Length = 423 Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 17/130 (13%) Query: 9 LFKLLLIGDSGVGKT--CVLFRFSDDAFNTTFISTIGIDFK------IKTVELQGKKIKL 60 ++K +IG G GKT C F D IG +FK I +V++ G++ L Sbjct: 246 VYKCHVIGPKGSGKTGMCRGFLVED------MHKLIGKEFKTNVVNCINSVQVYGQEKHL 299 Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120 + D + + + LVYD +N +SFE +++ I +A + M++ Sbjct: 300 ILRDIDVRHALDPLQPQEVNCDVAC-LVYDSSNPRSFEYVARIY--IKYYAESKIPVMIV 356 Query: 121 GNKCDMDDKR 130 G KCDMD++R Sbjct: 357 GTKCDMDERR 366 >4ZI3-A nrPDB Length = 190 Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 5/96 (5%) Query: 3 KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQI 62 K D ++LL+G GKT +L + + + + T G F IK+V+ QG KL + Sbjct: 11 KSAPDQEVRILLLGLDNAGKTTLLKQLASEDI-SHITPTQG--FNIKSVQSQG--FKLNV 65 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFE 98 WD GQ + SY+ ++ V D + K FE Sbjct: 66 WDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFE 101 >1YZG-A nrPDB Length = 179 Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 12/120 (10%) Query: 11 KLLLIGDSGVGKTCVLFRF-SDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K++++G GKT +L++F ++ +T+ TIG + + E+ K +WD GQE Sbjct: 18 KVIIVGLDNAGKTTILYQFLMNEVVHTS--PTIGSNVE----EIVVKNTHFLMWDIGGQE 71 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVER---MLLGNKCDM 126 + +YY I+LV D + + + L + H ED+ + ++ NK DM Sbjct: 72 SLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAH--EDLRKAAVLIFANKQDM 129 >2H16-A nrPDB Length = 183 Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 63/128 (49%), Gaps = 12/128 (9%) Query: 11 KLLLIGDSGVGKTCVLFRFS-DDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K++++G GKT +L++FS ++ +T+ TIG + + E+ + +WD GQE Sbjct: 24 KVIIVGLDNAGKTTILYQFSMNEVVHTS--PTIGSNVE----EIVINNTRFLMWDIGGQE 77 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVER---MLLGNKCDM 126 + +YY +++V D T+ + + L + H ED+ + ++ NK D+ Sbjct: 78 SLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAH--EDLRKAGLLIFANKQDV 135 Query: 127 DDKRVVPK 134 + V + Sbjct: 136 KECMTVAE 143 >3BH6-A nrPDB Length = 164 Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 5/88 (5%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 ++LL+G GKT +L + + + + T G F IK+V+ QG KL +WD G + Sbjct: 6 RILLLGLDNAGKTTLLKQLASEDI-SHITPTQG--FNIKSVQSQG--FKLNVWDIGGLRK 60 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFE 98 SY+ ++ V D + K FE Sbjct: 61 IRPYWRSYFENTDILIYVIDSADRKRFE 88 >6HLU-A nrPDB Length = 974 Score = 37.4 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 12/169 (7%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV-ELQG-------KKIKLQI 62 K+ LIGD GKT +L + + F+ T G++ K ++G K+ Sbjct: 482 KVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFHF 541 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGN 122 WD GQE H + + ML+ D ++ N WLR+I+++ + +++ N Sbjct: 542 WDFGGQEIMHASHQFFMTRSSVYMLLLD---SRTDSNKHYWLRHIEKYGGKS-PVIVVMN 597 Query: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL 171 K D + + + K + RF S K +E +L +L Sbjct: 598 KIDENPSYNIEQKKINERFPAIENRFHRISCKNGDGVESIAKSLKSAVL 646 >3DPU-A nrPDB Length = 535 Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust. Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 12/171 (7%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVE-LQG-------KKIKLQ 61 K+ LIGD GKT +L + + F+ T G++ K ++G K+ Sbjct: 42 IKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFH 101 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 WD GQE H + + ML+ D ++ N WLR+I+++ + +++ Sbjct: 102 FWDFGGQEIMHASHQFFMTRSSVYMLLLD---SRTDSNKHYWLRHIEKYGGKS-PVIVVM 157 Query: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 NK D + + + K + RF S K +E +L +L Sbjct: 158 NKIDENPSYNIEQKKINERFPAIENRFHRISCKNGDGVESIAKSLKSAVLH 208 >5DE3-A nrPDB Length = 169 Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 6/117 (5%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 ++L++G GKT +L S++ TT T G F IK++ G L+IWD GQ+ Sbjct: 2 RILVLGLDNAGKTTILKALSEEDI-TTITPTQG--FNIKSLSRDG--FNLKIWDIGGQKS 56 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSF-ENISKWLRNIDEHANEDVERMLLGNKCDM 126 +Y+ ++ V D + K E+ + + E V ++ NK D+ Sbjct: 57 IRPYWRNYFDQTDALIYVIDSADSKRLSESEFELTELLQEEKMTGVPLLVFANKQDL 113 >6GNI-B nrPDB Length = 167 Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 10/118 (8%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KLL +G GKT +L +D ++T+ + + EL IK +D G + Sbjct: 3 KLLFLGLDNAGKTTLLHMLKNDR-----LATLQPTWHPTSEELAIGNIKFTTFDLGGHIQ 57 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENIS---KWLRNIDEHANEDVERMLLGNKCD 125 + Y+ GI+ + D + + F+ L NI E +DV ++LGNK D Sbjct: 58 ARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAEL--KDVPFVILGNKID 113 >1M2O-B nrPDB Length = 190 Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust. Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 10/118 (8%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KLL +G GKT +L +D ++T+ + + EL IK +D G + Sbjct: 25 KLLFLGLDNAGKTTLLHMLKNDR-----LATLQPTWHPTSEELAIGNIKFTTFDLGGHIQ 79 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENIS---KWLRNIDEHANEDVERMLLGNKCD 125 + Y+ GI+ + D + + F+ L NI E +DV ++LGNK D Sbjct: 80 ARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAEL--KDVPFVILGNKID 135 >6D4G-A nrPDB Length = 271 Score = 34.7 bits (78), Expect = 0.030, Method: Compositional matrix adjust. Identities = 23/90 (25%), Positives = 53/90 (58%), Gaps = 4/90 (4%) Query: 84 GIMLVYDITNG--KSFENISKWLRNI-DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQI 140 G +L D++ G ++F++ K++ N+ ++ A +++ KCD +R + + Sbjct: 164 GFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKKPIVIVLTKCDEGVERYIRDAHTFAL 223 Query: 141 AREHGIRFFETSAKANINIEKAFLTLAEDI 170 ++++ ++ ETSA++N+N++ AF TL + I Sbjct: 224 SKKN-LQVVETSARSNVNVDLAFSTLVQLI 252 >3C5H-A nrPDB Length = 255 Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust. Identities = 23/90 (25%), Positives = 53/90 (58%), Gaps = 4/90 (4%) Query: 84 GIMLVYDITNG--KSFENISKWLRNI-DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQI 140 G +L D++ G ++F++ K++ N+ ++ A +++ KCD +R + + Sbjct: 165 GFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKKPIVVVLTKCDEGVERYIRDAHTFAL 224 Query: 141 AREHGIRFFETSAKANINIEKAFLTLAEDI 170 ++++ ++ ETSA++N+N++ AF TL + I Sbjct: 225 SKKN-LQVVETSARSNVNVDLAFSTLVQLI 253 >2H57-A nrPDB Length = 190 Score = 33.5 bits (75), Expect = 0.070, Method: Compositional matrix adjust. Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 8/121 (6%) Query: 12 LLLIGDSGVGKTCVLFRF-SDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 +L +G GKT ++ + +A + + TIG F I+ + + + ++D +GQ R Sbjct: 24 VLCLGLDNSGKTTIINKLKPSNAQSQNILPTIG--FSIE--KFKSSSLSFTVFDMSGQGR 79 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVER---MLLGNKCDMD 127 + + YY+ I+ V D ++ + L + H + R + NK D+ Sbjct: 80 YRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLR 139 Query: 128 D 128 D Sbjct: 140 D 140 >3IHW-A nrPDB Length = 184 Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust. Identities = 35/173 (20%), Positives = 77/173 (44%), Gaps = 19/173 (10%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFI---STIGIDFKIKTVELQGKKIKLQIWDTA 66 K+ ++G+ GK+ ++ R+ T++ S G FK K + + G+ L I D Sbjct: 21 LKVGIVGNLSSGKSALVHRY----LTGTYVQEESPEGGRFK-KEIVVDGQSYLLLIRDEG 75 Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNK-- 123 G + ++ V+ + + SF+ + + + N +V +L+G + Sbjct: 76 GPPELQ-----FAAWVDAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQDA 130 Query: 124 CDMDDKRVVPKGKGEQIARE-HGIRFFETSAKANINIEKAFLTLAEDI--LRK 173 + RV+ + +++ + ++ET A +N+E+ F +A+ + LRK Sbjct: 131 ISAANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKVVALRK 183 >6IAE-A nrPDB Length = 223 Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust. Identities = 45/210 (21%), Positives = 77/210 (36%), Gaps = 36/210 (17%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFS-------DDAFNTTFISTIGIDFKIKTVELQ 54 A D L K+L++G S GK+ V + + T + + ++ + Sbjct: 2 AASMSDDLVKILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVEIALDDTRRS 61 Query: 55 G------KKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNID 108 G KK +Q+WD G + + A GI+ V++ S + + W +N Sbjct: 62 GRQAAGLKKAVVQLWDVGGSSKHQAGWPAIASNADGIIYVFNPEVKGSEKELLLWYKNFA 121 Query: 109 EHANE------------DVERMLLGNKCDMD-----DKRVVPKGKGEQIAREHGIRFFET 151 + +E D ++ + + D + P K Q GIR ET Sbjct: 122 LNQDELDDDNNFKMRVTDGHSLIFSHHSSLPEFAVGDNAIPPMPKQLQ-----GIRALET 176 Query: 152 SAK-ANINIEKAFLTLAEDILRKTPVKEPN 180 S + N ++AF L E I+ E N Sbjct: 177 SLDYQSDNFKEAFDALVEQIIASRLAAEEN 206 >2QAG-A nrPDB Length = 361 Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 9/67 (13%) Query: 10 FKLLLIGDSGVGKTCVLFR-FSDDAFNTTFIS--------TIGIDFKIKTVELQGKKIKL 60 F L+++G+SG+GK+ ++ F D + I T+ I+ +E +G K++L Sbjct: 38 FTLMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLRL 97 Query: 61 QIWDTAG 67 + DT G Sbjct: 98 TVVDTPG 104 >1HEY-A nrPDB Length = 128 Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust. Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 1/91 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K L++G+ G GK+ V + FN + G+D + ++ G + W+ + Sbjct: 5 LKFLVVGNGGTGKSTVRNLLKELGFNNVEDAEDGVD-ALNKLQAGGYGFVISDWNMPNMD 63 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENI 100 + T GAM + V +T ENI Sbjct: 64 GLELLKTIRADGAMSALPVLMVTAEAKKENI 94 >3FTQ-A nrPDB Length = 274 Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 9/67 (13%) Query: 10 FKLLLIGDSGVGKTCVLFR-FSDDAFNTTFIS--------TIGIDFKIKTVELQGKKIKL 60 F L+++G+SG+GK+ ++ F D + I T+ I+ +E +G K++L Sbjct: 6 FTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLRL 65 Query: 61 QIWDTAG 67 + DT G Sbjct: 66 TVVDTPG 72 >2X77-A nrPDB Length = 189 Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust. Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 10/96 (10%) Query: 3 KKTYDLL-----FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK 57 K+T LL ++L++G GKT +L+R + + ++T LQ K Sbjct: 11 KQTLGLLPADRKIRVLMLGLDNAGKTSILYRLH---LGDVVTTVPTVGVNLET--LQYKN 65 Query: 58 IKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITN 93 I ++WD GQ Y+ ++ V D T+ Sbjct: 66 ISFEVWDLGGQTGVRPYWRCYFSDTDAVIYVVDSTD 101 >3T1O-A nrPDB Length = 198 Score = 30.4 bits (67), Expect = 0.57, Method: Compositional matrix adjust. Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 7/83 (8%) Query: 52 ELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHA 111 E++G K + ++ GQ ++ RG GI+ V D + N ++ +RN+ E+ Sbjct: 68 EVKGFKTRFHLYTVPGQVFYNASRKLILRGVDGIVFVADSAPNRLRAN-AESMRNMRENL 126 Query: 112 NE------DVERMLLGNKCDMDD 128 E DV ++ NK D+ D Sbjct: 127 AEYGLTLDDVPIVIQVNKRDLPD 149 >5GAD-l nrPDB Length = 497 Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 12/93 (12%) Query: 10 FKLLLIGDSGVGKTCVLFRFSD--DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67 F +L++G +GVGKT + + + + + + G F+ VE +LQ+W G Sbjct: 294 FVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVE------QLQVW---G 344 Query: 68 QERFHTITTSYYRGAMGIMLVYDITNGKSFENI 100 Q R + + + GA +++D NI Sbjct: 345 Q-RNNIPVIAQHTGADSASVIFDAIQAAKARNI 376 >2QAG-B nrPDB Length = 427 Score = 30.0 bits (66), Expect = 0.67, Method: Compositional matrix adjust. Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 12/66 (18%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTF------ISTIGIDFKIKTVELQGK--KIKLQ 61 F +L +G++G+GK+ ++ D FNT F + G+ + T +LQ ++KL Sbjct: 43 FNILCVGETGLGKSTLM----DTLFNTKFEGEPATHTQPGVQLQSNTYDLQESNVRLKLT 98 Query: 62 IWDTAG 67 I T G Sbjct: 99 IVSTVG 104 >2GAO-A nrPDB Length = 208 Score = 30.0 bits (66), Expect = 0.76, Method: Compositional matrix adjust. Identities = 32/152 (21%), Positives = 61/152 (40%), Gaps = 12/152 (7%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL+ +G GKT +L DD + + EL + +D G E+ Sbjct: 37 KLVFLGLDNAGKTTLLHMLKDDRLGQHVPT-----LHPTSEELTIAGMTFTTFDLGGHEQ 91 Query: 71 FHTITTSYYRGAMGIMLVYDIT-NGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 + +Y GI+ + D + + E+ + + + +V ++LGNK D D Sbjct: 92 ARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTD- 150 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEK 161 E+ RE + +T+ K N+ +++ Sbjct: 151 -----AISEEKLREIFGLYGQTTGKGNVTLKE 177 >5W2O-A nrPDB Length = 439 Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust. Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 5/61 (8%) Query: 47 KIKTVELQGKKIKLQIWDTAG-----QERFHTITTSYYRGAMGIMLVYDITNGKSFENIS 101 ++ V+ GK + Q+W++AG +RF + + GA I+ YD+ N +S Sbjct: 102 RMSYVQRMGKLLGGQLWESAGSPEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVS 161 Query: 102 K 102 Sbjct: 162 P 162 >6A34-A nrPDB Length = 364 Score = 30.0 bits (66), Expect = 0.78, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 8/51 (15%) Query: 140 IAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISSGG 190 +AREHGI FF + ++I++E L +DI P++E + E V ++ GG Sbjct: 267 LAREHGIPFFAVAPLSSIDME---LKSGKDI----PIEERSPEEV-LTCGG 309 >4KV9-A nrPDB Length = 412 Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 4/64 (6%) Query: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGK----KIKLQIW 63 +F +L +G++G+GK+ +L + F+ + + D K+K V K K+KL + Sbjct: 40 FVFNILCVGETGIGKSTLLETLFNQKFDFSPSTHDLTDPKLKAVTYDLKEANVKLKLTVV 99 Query: 64 DTAG 67 +T G Sbjct: 100 ETCG 103 >6ACF-A nrPDB Length = 367 Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust. Identities = 13/41 (31%), Positives = 21/41 (51%) Query: 81 GAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 G I++++D T G + W+ N +E A ED R+ G Sbjct: 24 GLKAIIVIHDTTLGPALGGTRMWMYNSEEEALEDALRLARG 64 >1F6B-A nrPDB Length = 198 Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust. Identities = 31/152 (20%), Positives = 64/152 (42%), Gaps = 12/152 (7%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL+ +G GKT +L DD + T+ + EL + +D G + Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDRLG-QHVPTL----HPTSEELTIAGMTFTTFDLGGHIQ 81 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI-DEHANEDVERMLLGNKCDMDDK 129 + +Y GI+ + D + + + L ++ + +V ++LGNK D Sbjct: 82 ARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDR--- 138 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEK 161 P+ E+ RE + +T+ K ++++++ Sbjct: 139 ---PEAISEERLREMFGLYGQTTGKGSVSLKE 167 >5CYO-A nrPDB Length = 274 Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 9/67 (13%) Query: 10 FKLLLIGDSGVGKTCV---LF--RFSDDAFNTTFISTIGIDFKIKT----VELQGKKIKL 60 F ++++G SG+GK+ + LF + S + T I +IK+ +E +G ++KL Sbjct: 5 FNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKL 64 Query: 61 QIWDTAG 67 + DT G Sbjct: 65 TVIDTPG 71 >4ARZ-A nrPDB Length = 310 Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%) Query: 11 KLLLIGDSGVGKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 KLLL+G SG GK+ + FS+ AF+T + ID + + G + L +WD GQ Sbjct: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGA-TIDVEHSHLRFLG-NMTLNLWDCGGQ 65 Query: 69 ERF 71 + F Sbjct: 66 DVF 68 >6CS8-A nrPDB Length = 303 Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 12/93 (12%) Query: 10 FKLLLIGDSGVGKTCVLFRFSD--DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67 F +L++G +GVGKT + + + + + + G F+ VE +LQ+W G Sbjct: 100 FVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVE------QLQVW---G 150 Query: 68 QERFHTITTSYYRGAMGIMLVYDITNGKSFENI 100 Q R + + + GA +++D NI Sbjct: 151 Q-RNNIPVIAQHTGADSASVIFDAIQAAKARNI 182 >2IWR-A nrPDB Length = 178 Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust. Identities = 36/173 (20%), Positives = 78/173 (45%), Gaps = 17/173 (9%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +L ++GD+ GK+ ++ RF ++ T +K K + + G+ + I + AG Sbjct: 8 LRLGVLGDARSGKSSLIHRFLTGSYQV-LEKTESEQYK-KEMLVDGQTHLVLIREEAG-- 63 Query: 70 RFHTITTSYYRG-AMGIMLVYDITNGKSFENISKW---LRNIDEHANEDVERMLLG--NK 123 + + G A ++ V+ + + SF+ +S+ L ++ + L+G ++ Sbjct: 64 ----APDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDR 119 Query: 124 CDMDDKRVVPKGKGEQI-AREHGIRFFETSAKANINIEKAFLTLAEDI--LRK 173 RVV + + A ++ET A +N+++ F +A+ + LRK Sbjct: 120 ISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRK 172 >4V62-AO nrPDB Length = 247 Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 17/126 (13%) Query: 37 TFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKS 96 TF+ GIDF+ TV++ AG ER + T A V IT Sbjct: 95 TFVEEDGIDFQPVTVQM------------AGGERIPLLFTVKNLVASTQPNVTSITTSTD 142 Query: 97 FENISKWLRNIDEHANED-VERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKA 155 F K N+ + + ++ G D +P+ K E++AR + RF T + Sbjct: 143 F----KGEFNVPSYRTANFLDPKGRGLASGYDSAIALPQAKEEELARANVKRFSLTKGQI 198 Query: 156 NINIEK 161 ++N+ K Sbjct: 199 SLNVAK 204 >3V9H-A nrPDB Length = 566 Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 5/36 (13%) Query: 91 ITNGKSFENISKWLRNIDEHANEDVE-RMLLGNKCD 125 + + KSF I KWL EHA +L G KCD Sbjct: 394 VIDAKSFARIKKWL----EHARSSPSLTILAGGKCD 425 >3J9V-F nrPDB Length = 517 Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 25/52 (48%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64 L + D V + VL D A F T GID K TVE G+ +++ + + Sbjct: 55 LTLPDGTVRQGQVLEIRGDRAIVQVFEGTSGIDVKKTTVEFTGESLRIPVSE 106 >2YV5-A nrPDB Length = 302 Score = 26.9 bits (58), Expect = 6.2, Method: Compositional matrix adjust. Identities = 12/31 (38%), Positives = 18/31 (58%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFIS 40 F +L G SGVGK+ +L R + + T +S Sbjct: 166 FICILAGPSGVGKSSILSRLTGEELRTQEVS 196 >5IRR-A nrPDB Length = 308 Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust. Identities = 12/24 (50%), Positives = 18/24 (75%), Gaps = 3/24 (12%) Query: 3 KKTYDLLFKLLLIGDSGVGKTCVL 26 KK Y KL+++GDSG+GKT ++ Sbjct: 23 KKKY---IKLIVVGDSGLGKTTLI 43 >5IPK-A nrPDB Length = 735 Score = 26.6 bits (57), Expect = 7.0, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 134 KGKGEQIAREHGIRFF--ETSAKANINIEKAFLTLAEDILRKTPV 176 K E+ + G+ F + S K N++IEK +T E+I PV Sbjct: 527 KDDEEKFFPQSGVLIFGKQGSEKTNVDIEKVMITDEEEIRTTNPV 571 >3J1Q-A nrPDB Length = 737 Score = 26.6 bits (57), Expect = 7.0, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%) Query: 134 KGKGEQIAREHGIRFF--ETSAKANINIEKAFLTLAEDILRKTPV 176 K E+ + G+ F + S K N++IEK +T E+I PV Sbjct: 529 KDDEEKFFPQSGVLIFGKQGSEKTNVDIEKVMITDEEEIRTTNPV 573 >6CES-A nrPDB Length = 313 Score = 26.6 bits (57), Expect = 7.3, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Query: 11 KLLLIGDSGVGKTCVL-FRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K+LL+G SG GKT + F++ T ID + V G + L +WD GQ+ Sbjct: 9 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLV-LNLWDCGGQD 67 Query: 70 RF 71 F Sbjct: 68 TF 69 >1LEH-A nrPDB Length = 364 Score = 26.6 bits (57), Expect = 8.0, Method: Compositional matrix adjust. Identities = 12/41 (29%), Positives = 19/41 (46%) Query: 81 GAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 G ++ ++D T G + W N +E A ED R+ G Sbjct: 24 GLKAVIAIHDTTLGPALGGARMWTYNAEEEAIEDALRLARG 64 >1YOB-A nrPDB Length = 179 Score = 26.2 bits (56), Expect = 9.0, Method: Compositional matrix adjust. Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 5/88 (5%) Query: 21 GKTCVLFRFSDD-AFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYY 79 GKT LF D + ++ +G + + +G KI + W T G E F + Sbjct: 88 GKTVALFGLGDQVGYPENYLDALGELYSF--FKDRGAKI-VGSWSTDGYE-FESSEAVVD 143 Query: 80 RGAMGIMLVYDITNGKSFENISKWLRNI 107 +G+ L D +GK+ E ++ WL I Sbjct: 144 GKFVGLALDLDNQSGKTDERVAAWLAQI 171 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5SZJ-A nrPDB 309 7e-85 5LPN-A nrPDB 270 2e-73 5SZI-A nrPDB 260 4e-70 4LHX-A nrPDB 258 1e-69 5SZH-B nrPDB 257 2e-69 3CUE-F nrPDB 257 2e-69 2RHD-A nrPDB 255 1e-68 5FBL-B nrPDB 254 2e-68 3L0I-B nrPDB 253 3e-68 2F9L-A nrPDB 248 1e-66 2WWX-A nrPDB 247 2e-66 2A5J-A nrPDB 247 2e-66 1Z0A-A nrPDB 246 4e-66 1YZN-A nrPDB 246 5e-66 4UJ4-A nrPDB 246 6e-66 5UB8-A nrPDB 245 9e-66 1ZBD-A nrPDB 243 3e-65 6O62-A nrPDB 243 5e-65 4RKE-A nrPDB 242 8e-65 2F7S-A nrPDB 242 1e-64 3CPH-A nrPDB 241 1e-64 2O52-A nrPDB 241 2e-64 2BMD-A nrPDB 240 3e-64 2GF9-A nrPDB 239 5e-64 3CPJ-B nrPDB 239 7e-64 2IEZ-A nrPDB 238 1e-63 4RKF-A nrPDB 238 1e-63 2G6B-A nrPDB 238 2e-63 3RAB-A nrPDB 237 2e-63 3DZ8-A nrPDB 237 3e-63 1Z0F-A nrPDB 236 6e-63 2OCY-C nrPDB 235 7e-63 5XR6-A nrPDB 233 5e-62 6IF2-B nrPDB 231 1e-61 2IEY-A nrPDB 231 2e-61 2EW1-A nrPDB 231 2e-61 6HUF-A nrPDB 230 3e-61 2HUP-A nrPDB 229 5e-61 4G01-B nrPDB 228 9e-61 2HEI-A nrPDB 228 1e-60 3TSO-A nrPDB 228 1e-60 1X3S-A nrPDB 228 1e-60 3BC1-A nrPDB 228 1e-60 3BFK-A nrPDB 228 2e-60 1TU4-A nrPDB 227 3e-60 3RWM-B nrPDB 227 4e-60 2IL1-A nrPDB 225 8e-60 4KYI-B nrPDB 223 3e-59 2FG5-A nrPDB 216 3e-57 1EK0-A nrPDB 216 4e-57 2FFQ-A nrPDB 216 5e-57 1YVD-A nrPDB 216 5e-57 1D5C-A nrPDB 215 9e-57 4QXA-A nrPDB 214 2e-56 1WMS-A nrPDB 213 3e-56 1Z06-A nrPDB 213 3e-56 2G77-B nrPDB 213 5e-56 2GIL-A nrPDB 213 5e-56 5LEF-A nrPDB 212 8e-56 4KLZ-A nrPDB 212 9e-56 5YOZ-A nrPDB 211 2e-55 2OCB-A nrPDB 210 5e-55 1YZU-A nrPDB 209 8e-55 4CZ2-A nrPDB 206 3e-54 5CM8-B nrPDB 206 4e-54 4M8N-E nrPDB 206 6e-54 5LDD-C nrPDB 205 7e-54 2P5S-A nrPDB 204 2e-53 2J0V-A nrPDB 203 4e-53 2KE5-A nrPDB 203 5e-53 4DXA-A nrPDB 202 7e-53 1ZC4-A nrPDB 201 1e-52 6IYB-A nrPDB 200 3e-52 3TH5-A nrPDB 199 7e-52 4PHF-A nrPDB 198 1e-51 5C2K-A nrPDB 198 1e-51 2WBL-C nrPDB 197 2e-51 2NTY-C nrPDB 196 3e-51 3RYT-C nrPDB 196 4e-51 2ERX-A nrPDB 196 4e-51 5ZHX-e nrPDB 196 6e-51 2WKQ-A nrPDB 196 7e-51 1Z22-A nrPDB 195 1e-50 3BWD-D nrPDB 195 2e-50 5UWI-A nrPDB 194 2e-50 5CLL-A nrPDB 194 2e-50 2N1B-A nrPDB 194 2e-50 2ATX-A nrPDB 193 3e-50 4U5X-A nrPDB 193 4e-50 4KU4-A nrPDB 193 5e-50 5WDR-A nrPDB 193 5e-50 5JCP-B nrPDB 193 5e-50 2FN4-A nrPDB 192 1e-49 2W2X-A nrPDB 191 2e-49 2G3Y-A nrPDB 190 3e-49 1RYH-A nrPDB 190 3e-49 2J1L-A nrPDB 190 3e-49 2FV8-A nrPDB 190 3e-49 3WYF-A nrPDB 189 6e-49 5XOJ-A nrPDB 188 1e-48 2ERY-A nrPDB 188 2e-48 4FMC-F nrPDB 187 2e-48 4WA7-A nrPDB 187 3e-48 3CON-A nrPDB 187 3e-48 5WDQ-A nrPDB 186 6e-48 2CJW-A nrPDB 186 8e-48 3CBQ-A nrPDB 185 1e-47 5VCU-A nrPDB 185 2e-47 6FF8-A nrPDB 185 2e-47 5UHV-A nrPDB 184 2e-47 4DJT-A nrPDB 184 2e-47 3VHL-B nrPDB 184 3e-47 2ATV-A nrPDB 184 3e-47 3A58-B nrPDB 183 6e-47 3PIR-A nrPDB 181 2e-46 2Q3H-A nrPDB 181 2e-46 5ZVP-A nrPDB 181 2e-46 3T5G-A nrPDB 179 6e-46 3Q85-A nrPDB 178 1e-45 3OES-A nrPDB 176 7e-45 3Q72-A nrPDB 175 2e-44 2NZJ-A nrPDB 174 2e-44 3E5H-A nrPDB 173 5e-44 4MIT-A nrPDB 171 2e-43 3RAP-R nrPDB 169 5e-43 3REG-A nrPDB 169 8e-43 2GF0-A nrPDB 169 8e-43 3CLV-A nrPDB 169 9e-43 5XC3-A nrPDB 167 3e-42 1GWN-A nrPDB 160 4e-40 1M7B-A nrPDB 158 1e-39 5C1S-A nrPDB 146 4e-36 5EE5-B nrPDB 141 2e-34 3C5C-A nrPDB 140 4e-34 5HZH-A nrPDB 137 3e-33 3LRP-A nrPDB 137 4e-33 4YLG-A nrPDB 136 6e-33 2YC4-C nrPDB 136 7e-33 6FAE-B nrPDB 136 7e-33 3O47-A nrPDB 136 7e-33 2REX-B nrPDB 136 8e-33 1Z6X-A nrPDB 134 2e-32 3AQ4-A nrPDB 134 2e-32 2B6H-A nrPDB 134 2e-32 6DFF-C nrPDB 133 4e-32 1J2J-A nrPDB 133 4e-32 5UF8-A nrPDB 132 1e-31 3LVQ-E nrPDB 131 2e-31 2A5F-A nrPDB 130 4e-31 5NZV-F nrPDB 129 6e-31 2AL7-A nrPDB 129 9e-31 6BBQ-A nrPDB 128 1e-30 4ILE-A nrPDB 128 2e-30 1MOZ-A nrPDB 126 7e-30 4ZI3-A nrPDB 122 7e-29 1YZG-A nrPDB 118 2e-27 2H16-A nrPDB 117 4e-27 3BH6-A nrPDB 116 1e-26 4WNR-A nrPDB 115 1e-26 1KSG-A nrPDB 115 1e-26 3D6T-B nrPDB 109 1e-24 4C0K-A nrPDB 107 4e-24 Sequences not found previously or not previously below threshold: 5DE3-A nrPDB 116 1e-26 2X77-A nrPDB 107 2e-24 6HLU-A nrPDB 98 2e-21 3DPU-A nrPDB 98 2e-21 3IHW-A nrPDB 96 8e-21 4V0N-A nrPDB 94 5e-20 2H57-A nrPDB 88 2e-18 2IWR-A nrPDB 85 2e-17 5DI3-B nrPDB 82 1e-16 4M9Q-A nrPDB 82 1e-16 1M2O-B nrPDB 82 2e-16 4BAS-A nrPDB 82 2e-16 6GNI-B nrPDB 81 3e-16 2GAO-A nrPDB 76 8e-15 1F6B-A nrPDB 75 2e-14 6GDG-D nrPDB 69 1e-12 3T1O-A nrPDB 65 3e-11 2GJ9-A nrPDB 64 5e-11 5YMX-A nrPDB 63 7e-11 6IAE-A nrPDB 61 2e-10 5KU1-A nrPDB 61 3e-10 5KSO-A nrPDB 61 3e-10 6G79-A nrPDB 60 5e-10 2E87-A nrPDB 60 7e-10 6CES-A nrPDB 60 8e-10 5J8B-z nrPDB 58 3e-09 5IMR-C nrPDB 58 3e-09 2LKD-A nrPDB 57 4e-09 4ARZ-A nrPDB 56 1e-08 1XZP-A nrPDB 55 2e-08 3GEH-A nrPDB 54 3e-08 6D4G-A nrPDB 54 4e-08 1MKY-A nrPDB 54 4e-08 3CB4-D nrPDB 54 5e-08 3C5H-A nrPDB 54 5e-08 2CXX-A nrPDB 53 9e-08 1WF3-A nrPDB 52 1e-07 5KUT-A nrPDB 51 3e-07 5LAD-A nrPDB 51 4e-07 3K53-A nrPDB 51 4e-07 2Q3F-A nrPDB 51 4e-07 6CES-C nrPDB 50 6e-07 3LLU-A nrPDB 50 7e-07 5ZZM-A nrPDB 50 8e-07 2DYK-A nrPDB 50 8e-07 3R9W-A nrPDB 50 8e-07 6GB2-BC nrPDB 49 1e-06 3J8G-X nrPDB 49 2e-06 3GEE-A nrPDB 49 2e-06 5DN8-A nrPDB 47 5e-06 5KH0-A nrPDB 46 8e-06 2YWH-A nrPDB 45 2e-05 3V00-C nrPDB 45 2e-05 1LNZ-A nrPDB 45 3e-05 2GTP-A nrPDB 45 3e-05 3IZY-P nrPDB 44 3e-05 3IEU-A nrPDB 44 4e-05 2QTH-A nrPDB 44 4e-05 3A1W-A nrPDB 44 5e-05 4DCU-A nrPDB 43 7e-05 3A1U-A nrPDB 43 7e-05 4QJ3-A nrPDB 43 7e-05 5VAI-A nrPDB 43 7e-05 2BCJ-Q nrPDB 43 8e-05 4NCL-A nrPDB 43 8e-05 4N3G-A nrPDB 43 8e-05 1ZO1-I nrPDB 43 8e-05 5YT0-A nrPDB 43 8e-05 5FG3-A nrPDB 43 8e-05 4TN1-B nrPDB 43 1e-04 3FTQ-A nrPDB 43 1e-04 4CSU-9 nrPDB 42 1e-04 4KJZ-A nrPDB 42 1e-04 4B44-A nrPDB 42 1e-04 3JCN-b nrPDB 42 1e-04 2QAG-A nrPDB 42 1e-04 4ZU9-A nrPDB 42 1e-04 5X4B-A nrPDB 42 1e-04 3J4J-A nrPDB 42 2e-04 2WJG-A nrPDB 42 2e-04 2WJI-A nrPDB 41 2e-04 1SHZ-A nrPDB 41 3e-04 4V7F-o nrPDB 41 3e-04 6OIJ-A nrPDB 41 3e-04 2ODE-A nrPDB 41 4e-04 3PR1-A nrPDB 41 4e-04 4FID-A nrPDB 41 4e-04 1UDX-A nrPDB 41 4e-04 4V8Y-CP nrPDB 40 6e-04 6OIK-A nrPDB 40 7e-04 3T5D-A nrPDB 40 7e-04 4NCF-A nrPDB 40 8e-04 4UJC-AB nrPDB 40 8e-04 3WBI-A nrPDB 40 8e-04 4V8Z-CV nrPDB 40 8e-04 2QAG-C nrPDB 39 0.001 1G7S-A nrPDB 39 0.001 1ZCB-A nrPDB 39 0.002 6D9H-A nrPDB 38 0.002 4WQY-BZ nrPDB 38 0.003 5CYO-A nrPDB 38 0.003 5IRR-A nrPDB 38 0.003 3H2Y-A nrPDB 37 0.005 3EC1-A nrPDB 37 0.006 3LX8-A nrPDB 37 0.006 4KV9-A nrPDB 36 0.009 2XTZ-A nrPDB 36 0.010 1PUJ-A nrPDB 36 0.013 1ZCA-A nrPDB 36 0.015 4V89-AW nrPDB 36 0.016 3JB9-B nrPDB 36 0.017 1TAG-A nrPDB 36 0.017 1U0L-A nrPDB 35 0.019 1SUL-A nrPDB 35 0.020 4Z54-A nrPDB 35 0.022 5TY0-A nrPDB 35 0.024 6F1T-i nrPDB 35 0.029 1NI3-A nrPDB 34 0.029 3W5J-A nrPDB 34 0.036 6F1Y-j nrPDB 34 0.037 6O81-S nrPDB 34 0.037 6FEC-S nrPDB 34 0.037 5AR1-A nrPDB 34 0.040 5H7K-A nrPDB 34 0.042 5H7J-A nrPDB 34 0.042 4R98-A nrPDB 34 0.047 2YV5-A nrPDB 34 0.049 1HEY-A nrPDB 34 0.052 4AC9-A nrPDB 34 0.055 1YE8-A nrPDB 34 0.055 6CS8-A nrPDB 34 0.058 4U00-A nrPDB 34 0.065 4YMS-J nrPDB 33 0.067 1EFM-A nrPDB 33 0.067 5GAD-l nrPDB 33 0.076 4Z8X-A nrPDB 33 0.081 2DHR-A nrPDB 33 0.086 1IY1-A nrPDB 33 0.086 1JAL-A nrPDB 33 0.093 2P8Y-T nrPDB 33 0.095 5EE0-A nrPDB 32 0.11 2R65-A nrPDB 32 0.11 6NOT-A nrPDB 32 0.12 6C2V-A nrPDB 32 0.12 4TLD-A nrPDB 32 0.13 5NON-A nrPDB 32 0.14 3S1A-A nrPDB 32 0.14 2VNE-A nrPDB 32 0.14 2IW3-A nrPDB 32 0.15 2QAG-B nrPDB 32 0.16 5A9Z-CA nrPDB 32 0.16 5OCH-A nrPDB 32 0.17 6HZK-A nrPDB 32 0.20 2OHF-A nrPDB 32 0.21 2WIC-A nrPDB 32 0.23 4ZKD-A nrPDB 32 0.24 3V70-A nrPDB 32 0.24 5TV2-A nrPDB 31 0.25 2I3B-A nrPDB 31 0.25 3LXX-A nrPDB 31 0.26 2IT1-A nrPDB 31 0.26 5G06-P nrPDB 31 0.27 2YYZ-A nrPDB 31 0.28 2IYT-A nrPDB 31 0.28 4N1A-A nrPDB 31 0.32 2OUK-A nrPDB 31 0.32 1S0U-A nrPDB 31 0.33 6G12-A nrPDB 31 0.33 1IRQ-A nrPDB 31 0.35 4FIN-A nrPDB 31 0.37 3R7W-B nrPDB 31 0.38 5ZLU-EE nrPDB 31 0.38 5KCS-1w nrPDB 31 0.43 4MRS-A nrPDB 31 0.44 1R6B-X nrPDB 31 0.44 5LZT-jj nrPDB 31 0.45 3VAA-A nrPDB 31 0.45 6I3O-A nrPDB 31 0.49 2P5T-B nrPDB 31 0.51 6QUZ-B nrPDB 31 0.52 2PJZ-A nrPDB 31 0.52 3PXG-A nrPDB 30 0.55 3PXI-A nrPDB 30 0.57 3FVQ-A nrPDB 30 0.58 1Z6G-A nrPDB 30 0.59 6B8D-A nrPDB 30 0.60 5C78-A nrPDB 30 0.61 4D61-i nrPDB 30 0.62 3ZJC-A nrPDB 30 0.62 5AUQ-A nrPDB 30 0.67 5LKM-A nrPDB 30 0.68 2CE7-A nrPDB 30 0.68 5OFO-C nrPDB 30 0.69 5IDV-A nrPDB 30 0.69 4CIU-A nrPDB 30 0.69 1JBK-A nrPDB 30 0.69 5IFK-A nrPDB 30 0.71 5W7Q-A nrPDB 30 0.71 3DEF-A nrPDB 30 0.73 3VX4-A nrPDB 30 0.74 4Q7L-A nrPDB 30 0.75 1QVR-A nrPDB 30 0.76 4YPN-A nrPDB 30 0.76 4YPL-A nrPDB 30 0.76 6HA8-V nrPDB 30 0.78 6ED3-A nrPDB 30 0.80 3P27-A nrPDB 30 0.81 2GZA-A nrPDB 30 0.81 3EC2-A nrPDB 30 0.83 3PV0-A nrPDB 30 0.86 5ANB-A nrPDB 30 0.88 3B5X-A nrPDB 30 0.88 1H65-A nrPDB 30 0.88 1YR7-A nrPDB 30 0.89 3J3U-A nrPDB 30 0.89 3IBY-A nrPDB 30 0.89 1LVG-A nrPDB 30 0.91 5D4W-A nrPDB 30 0.92 4J0Q-A nrPDB 30 0.92 3CNO-A nrPDB 30 0.93 5OWV-A nrPDB 29 0.94 4RY2-A nrPDB 29 0.94 4HSE-A nrPDB 29 0.95 5B3F-A nrPDB 29 0.97 3IZQ-1 nrPDB 29 1.00 5MKK-A nrPDB 29 1.0 3TR5-A nrPDB 29 1.0 4IXM-A nrPDB 29 1.0 4HZI-A nrPDB 29 1.0 3V9H-A nrPDB 29 1.0 2MHH-A nrPDB 29 1.0 2AXV-A nrPDB 29 1.1 4XGC-E nrPDB 29 1.2 4MYH-A nrPDB 29 1.2 3LLM-A nrPDB 29 1.2 6ID0-C nrPDB 29 1.3 3NHB-A nrPDB 29 1.3 6D00-1 nrPDB 29 1.3 4DBL-C nrPDB 29 1.4 1LV7-A nrPDB 29 1.4 2GA8-A nrPDB 29 1.4 3J81-k nrPDB 29 1.4 5B57-C nrPDB 29 1.5 5MRE-WW nrPDB 29 1.5 1V43-A nrPDB 29 1.6 6BK7-A nrPDB 29 1.6 2ZBL-A nrPDB 29 1.6 2NQL-A nrPDB 29 1.6 6EMW-E nrPDB 29 1.6 6EM8-A nrPDB 29 1.6 6FA9-A nrPDB 29 1.7 2P65-A nrPDB 29 1.7 4O0M-A nrPDB 29 1.8 6EPC-H nrPDB 29 1.9 1OFI-A nrPDB 29 1.9 1IM2-A nrPDB 29 1.9 4AYX-A nrPDB 29 1.9 1E94-E nrPDB 29 1.9 3GD7-A nrPDB 29 1.9 1Z47-A nrPDB 29 2.0 1MJ1-A nrPDB 29 2.0 2HDN-B nrPDB 29 2.0 6N0I-A nrPDB 29 2.1 6AMN-A nrPDB 28 2.1 1WXQ-A nrPDB 28 2.2 6QUZ-A nrPDB 28 2.2 5VHD-D nrPDB 28 2.2 4XGC-D nrPDB 28 2.2 5EUF-A nrPDB 28 2.4 1IHU-A nrPDB 28 2.4 3MMP-A nrPDB 28 2.4 5DGX-A nrPDB 28 2.4 2QOR-A nrPDB 28 2.4 2D62-A nrPDB 28 2.4 5JWO-A nrPDB 28 2.5 5JSZ-B nrPDB 28 2.5 5I92-A nrPDB 28 2.6 5VY8-A nrPDB 28 2.6 1SXJ-C nrPDB 28 2.6 3D0O-A nrPDB 28 2.7 2RGK-A nrPDB 28 2.8 5NKM-B nrPDB 28 2.9 4Q7K-A nrPDB 28 2.9 6BZS-A nrPDB 28 3.0 4G1U-C nrPDB 28 3.0 1KAG-A nrPDB 28 3.0 5VH6-A nrPDB 28 3.1 6E11-1 nrPDB 28 3.2 5LL6-h nrPDB 28 3.2 5UCV-A nrPDB 28 3.3 1IQP-A nrPDB 28 3.3 4XIG-S nrPDB 28 3.4 6G2G-A nrPDB 28 3.4 2PX0-A nrPDB 28 3.5 1WDT-A nrPDB 27 3.6 2PCL-A nrPDB 27 3.6 5Z1X-A nrPDB 27 3.7 2W6D-A nrPDB 27 3.7 6AN5-A nrPDB 27 3.8 3G2F-A nrPDB 27 3.8 1EZ4-A nrPDB 27 3.8 3WMF-A nrPDB 27 3.9 5NIK-J nrPDB 27 3.9 5LJA-A nrPDB 27 3.9 4NP6-A nrPDB 27 3.9 6MTD-v nrPDB 27 3.9 6CY1-A nrPDB 27 4.0 4UUD-B nrPDB 27 4.0 3L43-A nrPDB 27 4.0 2X2E-A nrPDB 27 4.0 2AKA-B nrPDB 27 4.0 5UBV-A nrPDB 27 4.0 6HCM-k1 nrPDB 27 4.1 6H7G-A nrPDB 27 4.2 5AJ2-A nrPDB 27 4.2 6MFU-A nrPDB 27 4.3 5DO7-A nrPDB 27 4.3 5A3F-A nrPDB 27 4.3 4XGL-A nrPDB 27 4.3 5L3R-A nrPDB 27 4.4 5D0U-A nrPDB 27 4.4 4V6W-Az nrPDB 27 4.4 2QU8-A nrPDB 27 4.5 6DLV-b nrPDB 27 4.6 2PZF-A nrPDB 27 4.6 4LJ8-A nrPDB 27 4.7 4WZ6-A nrPDB 27 4.7 4ROU-B nrPDB 27 4.8 1OXV-A nrPDB 27 4.9 1G29-1 nrPDB 27 4.9 5KST-A nrPDB 27 5.0 5L22-B nrPDB 27 5.1 5GKO-A nrPDB 27 5.1 4HUQ-A nrPDB 27 5.1 6HE4-H nrPDB 27 5.1 4F4J-A nrPDB 27 5.2 6HE9-H nrPDB 27 5.3 6DJQ-A nrPDB 27 5.3 >5SZJ-A nrPDB Length = 202 Score = 309 bits (791), Expect = 7e-85, Method: Composition-based stats. Identities = 200/200 (100%), Positives = 200/200 (100%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL Sbjct: 3 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 62 Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL Sbjct: 63 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 122 Query: 121 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN Sbjct: 123 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 182 Query: 181 SENVDISSGGGVTGWKSKCC 200 SENVDISSGGGVTGWKSKCC Sbjct: 183 SENVDISSGGGVTGWKSKCC 202 >5LPN-A nrPDB Length = 177 Score = 270 bits (692), Expect = 2e-73, Method: Composition-based stats. Identities = 175/175 (100%), Positives = 175/175 (100%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL Sbjct: 3 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 62 Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL Sbjct: 63 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 122 Query: 121 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP Sbjct: 123 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 177 >5SZI-A nrPDB Length = 209 Score = 260 bits (664), Expect = 4e-70, Method: Composition-based stats. Identities = 135/190 (71%), Positives = 159/190 (83%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 KTYD LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T+EL GK+IKLQIW Sbjct: 5 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 64 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 DTAGQERF TITT+YYRGAMGIMLVYDITN KSF+NI W+RNI+EHA+ DVE+M+LGNK Sbjct: 65 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 124 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSEN 183 CD++DKR V K +GE++A ++GI+F ETSAKANIN+E AF TLA DI K K + Sbjct: 125 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 184 Query: 184 VDISSGGGVT 193 + G +T Sbjct: 185 QGSNQGVKIT 194 >4LHX-A nrPDB Length = 186 Score = 258 bits (660), Expect = 1e-69, Method: Composition-based stats. Identities = 133/178 (74%), Positives = 155/178 (87%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 KTYD LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T+EL GK+IKLQIW Sbjct: 5 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 64 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 DTAGQERF TITT+YYRGAMGIMLVYDITN KSF+NI W+RNI+EHA+ DVE+M+LGNK Sbjct: 65 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 124 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNS 181 CD++DKR V K +GE++A ++GI+F ETSAKANIN+E AF TLA DI K K + Sbjct: 125 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 182 >5SZH-B nrPDB Length = 203 Score = 257 bits (658), Expect = 2e-69, Method: Composition-based stats. Identities = 102/197 (51%), Positives = 140/197 (71%), Gaps = 2/197 (1%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+EL GK IKLQIWDT Sbjct: 7 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 66 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQERF TIT+SYYRGA GI++VYD+T+ +S+ N+ +WL+ ID +A+E+V ++L+GNK D Sbjct: 67 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSD 126 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT-PVKEPNSENV 184 + K+VV ++ A GI F ETSAK N+E+AF+T+A +I ++ P E Sbjct: 127 LTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERP 186 Query: 185 DISSGGGVTG-WKSKCC 200 ++ CC Sbjct: 187 NLKIDSTPVKPAGGGCC 203 >3CUE-F nrPDB Length = 206 Score = 257 bits (657), Expect = 2e-69, Method: Composition-based stats. Identities = 107/203 (52%), Positives = 141/203 (69%), Gaps = 9/203 (4%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFKLLLIG+SGVGK+C+L RFSDD + +ISTIG+DFKIKTVEL GK +KLQIWDT Sbjct: 5 YDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDT 64 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQERF TIT+SYYRG+ GI++VYD+T+ +SF + WL+ ID +A V ++L+GNKCD Sbjct: 65 AGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCD 124 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI--------LRKTPVK 177 + DKRVV ++ A + + F ETSA + N+E AFLT+A I L +T K Sbjct: 125 LKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETTQK 184 Query: 178 EPNSENVDISSGGGVTGWKSKCC 200 + + NV++ G +T CC Sbjct: 185 KEDKGNVNL-KGQSLTNTGGGCC 206 >2RHD-A nrPDB Length = 175 Score = 255 bits (652), Expect = 1e-68, Method: Composition-based stats. Identities = 99/170 (58%), Positives = 136/170 (80%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+ L+ K +KLQIWDT Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDT 65 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQERF TIT+SYYRGA GI++VYD+T+ SF+N+ +W++ ID +A E+V ++L+GNKCD Sbjct: 66 AGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKCD 125 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175 + KRVV +G ++A HGI+F ETSAK N+E+AF T+A +I ++ Sbjct: 126 LVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQ 175 >5FBL-B nrPDB Length = 221 Score = 254 bits (649), Expect = 2e-68, Method: Composition-based stats. Identities = 88/209 (42%), Positives = 128/209 (61%), Gaps = 11/209 (5%) Query: 3 KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQI 62 YD LFK++LIGDSGVGK+ +L RF+ + FN STIG++F +++++ GK IK QI Sbjct: 10 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 69 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGN 122 WDTAGQER+ IT++YYRGA+G +LVYDI ++EN+ +WL+ + +HA+ ++ ML+GN Sbjct: 70 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 129 Query: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE---- 178 K D+ R VP + A ++G+ F ETSA + N+E AF T+ +I R K+ Sbjct: 130 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDR 189 Query: 179 -----PNSENVDISSGGGVTGWKS--KCC 200 S NV T K +CC Sbjct: 190 RENDMSPSNNVVPIHVPPTTENKPKVQCC 218 >3L0I-B nrPDB Length = 199 Score = 253 bits (648), Expect = 3e-68, Method: Composition-based stats. Identities = 99/169 (58%), Positives = 135/169 (79%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+EL GK IKLQIWDT Sbjct: 30 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 89 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL+ ID +A+E+V ++L+GNKCD Sbjct: 90 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 149 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 + K+VV ++ A GI F ETSAK N+E++F+T+A +I ++ Sbjct: 150 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 198 >2F9L-A nrPDB Length = 199 Score = 248 bits (634), Expect = 1e-66, Method: Composition-based stats. Identities = 79/173 (45%), Positives = 119/173 (68%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFK++LIGDSGVGK+ +L RF+ + FN STIG++F +++++ GK IK QIWDT Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 61 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQER+ IT++YYRGA+G +LVYDI ++EN+ +WL+ + +HA+ ++ ML+GNK D Sbjct: 62 AGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 121 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178 + R VP + A ++ + F ETSA + N+E+AF + +I R K+ Sbjct: 122 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ 174 >2WWX-A nrPDB Length = 175 Score = 247 bits (632), Expect = 2e-66, Method: Composition-based stats. Identities = 98/169 (57%), Positives = 134/169 (79%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+EL GK IKLQIWDT Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQERF TIT+SYYRGA GI++VYD+T+ +SF N+ +WL+ ID +A+E+V ++L+G KCD Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGIKCD 124 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 + K+VV ++ A GI F ETSAK N+E++F+T+A +I ++ Sbjct: 125 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRM 173 >2A5J-A nrPDB Length = 191 Score = 247 bits (632), Expect = 2e-66, Method: Composition-based stats. Identities = 83/172 (48%), Positives = 120/172 (69%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 LFK ++IGD+GVGK+C+L +F+D F TIG++F + V + GK+IKLQIWDT Sbjct: 18 GSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 77 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQE F +IT SYYRGA G +LVYDIT ++F +++ WL + +H++ ++ ML+GNK D Sbjct: 78 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 137 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK 177 ++ +R V + +GE AREHG+ F ETSAK N+E+AF+ A++I RK Sbjct: 138 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQG 189 >1Z0A-A nrPDB Length = 174 Score = 246 bits (629), Expect = 4e-66, Method: Composition-based stats. Identities = 84/170 (49%), Positives = 119/170 (70%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 Y LFK ++IGD+GVGK+C+L +F+D F TIG++F + + + GK+IKLQIW Sbjct: 5 SAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 64 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 DTAGQE F +IT SYYRGA G +LVYDIT +F +++ WL + +H+N ++ ML+GNK Sbjct: 65 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 124 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 D++ +R V K +GE AREHG+ F ETSAK N+E+AF+ A++I K Sbjct: 125 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK 174 >1YZN-A nrPDB Length = 185 Score = 246 bits (629), Expect = 5e-66, Method: Composition-based stats. Identities = 98/167 (58%), Positives = 126/167 (75%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 YD LFKLLLIG+SGVGK+C+L RFSDD + +ISTIG+DFKIKTVEL GK +KLQIWDT Sbjct: 18 YDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDT 77 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 AGQERF TIT+SYYRG+ GI++VYD+T+ +SF + WL+ ID +A V ++L+GNKCD Sbjct: 78 AGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCD 137 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 + DKRVV ++ A + + F ETSA + N+E AFLT+A I Sbjct: 138 LKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKE 184 >4UJ4-A nrPDB Length = 185 Score = 246 bits (628), Expect = 6e-66, Method: Composition-based stats. Identities = 80/176 (45%), Positives = 119/176 (67%) Query: 3 KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQI 62 YD LFK++LIGDSGVGK+ +L RF+ + FN STIG++F +++++ GK IK QI Sbjct: 4 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 63 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGN 122 WDTAG ER+ IT++YYRGA+G +LVYDI ++EN+ +WL+ + +HA+ ++ ML+GN Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 123 Query: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178 K D+ R VP + A ++G+ F ETSA + N+E AF T+ +I R K+ Sbjct: 124 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ 179 >5UB8-A nrPDB Length = 222 Score = 245 bits (626), Expect = 9e-66, Method: Composition-based stats. Identities = 81/192 (42%), Positives = 130/192 (67%), Gaps = 1/192 (0%) Query: 3 KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQI 62 Y+ L+K++LIGDSGVGK+ +L RF+ D FN STIG++F +T+E+ GK++K QI Sbjct: 9 SYDYEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQI 68 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGN 122 WDTAGQER+ IT++YYRGA+G ++VYDI +S+E++S+WL+ + EHA+ ++ L+GN Sbjct: 69 WDTAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADANIIIELVGN 128 Query: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE-PNS 181 K D+D R VP + + A E+ + F E SA ++ N++ +F L ++I + N+ Sbjct: 129 KSDLDHLRAVPTEEAKNFAMENNLLFTEASALSSDNVDLSFHQLLKNIYEMISKHQLENN 188 Query: 182 ENVDISSGGGVT 193 ++ ++ GG T Sbjct: 189 DSKQTNTAGGPT 200 >1ZBD-A nrPDB Length = 203 Score = 243 bits (621), Expect = 3e-65, Method: Composition-based stats. Identities = 96/196 (48%), Positives = 133/196 (67%), Gaps = 7/196 (3%) Query: 3 KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQI 62 +D +FK+L+IG+S VGKT LFR++DD+F F+ST+GIDFK+KT+ K+IKLQI Sbjct: 2 SHMFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQI 61 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGN 122 WDTAG ER+ TITT+YYRGAMG +L+YDITN +SF + W I ++ ++ + +L+GN Sbjct: 62 WDTAGLERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGN 121 Query: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182 KCDM+D+RVV +G Q+A G FFE SAK NIN+++ F L + I K SE Sbjct: 122 KCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKM------SE 175 Query: 183 NVDISSGGGVTGWKSK 198 ++D + VTG K Sbjct: 176 SLDT-ADPAVTGAKQG 190 >6O62-A nrPDB Length = 184 Score = 243 bits (620), Expect = 5e-65, Method: Composition-based stats. Identities = 97/178 (54%), Positives = 138/178 (77%), Gaps = 1/178 (0%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61 + + YD++ KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T+E +GK+IKLQ Sbjct: 7 SSRAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQ 66 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 +WDTAGQERF TITT+YYRGAMGI+L+YD+T+ +SFEN+ W + + +HANED + L+G Sbjct: 67 VWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVG 126 Query: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 179 NKCD + R V K +G+++A + + F E SAK+N N++ F LA I+++ V+E Sbjct: 127 NKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELA-SIIQEKHVEEN 183 >4RKE-A nrPDB Length = 176 Score = 242 bits (618), Expect = 8e-65, Method: Composition-based stats. Identities = 83/171 (48%), Positives = 120/171 (70%) Query: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64 +Y LFK ++IGD+GVGK+C+L +F+D F TIG++F + + + GK+IKLQIWD Sbjct: 6 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 65 Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKC 124 TAG E F +IT SYYRGA G +LVYDIT ++F +++ WL + +H+N ++ ML+GNK Sbjct: 66 TAGLEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKS 125 Query: 125 DMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175 D+D +R V K +GE AREHG+ F ETSA+ N+E+AF+ A++I K Sbjct: 126 DLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQ 176 >2F7S-A nrPDB Length = 217 Score = 242 bits (617), Expect = 1e-64, Method: Composition-based stats. Identities = 81/199 (40%), Positives = 128/199 (64%), Gaps = 11/199 (5%) Query: 3 KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGK------ 56 YD L KLL +GDSGVGKT L+R++D+ FN FI+T+GIDF+ K V + Sbjct: 19 SGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSS 78 Query: 57 ----KIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHA- 111 K+ LQ+WDTAGQERF ++TT+++R AMG +L++D+T+ +SF N+ W+ + +A Sbjct: 79 GKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 138 Query: 112 NEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL 171 E+ + +L+GNK D+ D+R V + + ++A ++GI +FETSA N+EKA TL + I+ Sbjct: 139 CENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIM 198 Query: 172 RKTPVKEPNSENVDISSGG 190 ++ ++ D +GG Sbjct: 199 KRMEQCVEKTQIPDTVNGG 217 >3CPH-A nrPDB Length = 213 Score = 241 bits (616), Expect = 1e-64, Method: Composition-based stats. Identities = 101/175 (57%), Positives = 138/175 (78%), Gaps = 1/175 (0%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 K+YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTV++ GKK+KLQ+W Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 DTAGQERF TITT+YYRGAMGI+LVYD+T+ ++F NI +W + ++EHAN++ + +L+GNK Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178 DM+ RVV +GE +A+E GI F E+SAK + N+ + F TLA+ I K + Sbjct: 135 SDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNK 188 >2O52-A nrPDB Length = 200 Score = 241 bits (615), Expect = 2e-64, Method: Composition-based stats. Identities = 77/178 (43%), Positives = 115/178 (64%) Query: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 D LFK L+IG +G GK+C+L +F ++ F TIG++F + V + GK +KLQIWDTA Sbjct: 23 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTA 82 Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDM 126 GQERF ++T SYYRGA G +LVYDIT+ +++ +++ WL + A+ ++ +L GNK D+ Sbjct: 83 GQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDL 142 Query: 127 DDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENV 184 D +R V + + A+E+ + F ETSA N+E+AFL A IL K E + E + Sbjct: 143 DPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 200 >2BMD-A nrPDB Length = 186 Score = 240 bits (613), Expect = 3e-64, Method: Composition-based stats. Identities = 78/183 (42%), Positives = 117/183 (63%) Query: 3 KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQI 62 +TYD LFK L+IG++G GK+C+L +F + F TIG++F K + + GK +KLQI Sbjct: 4 SETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQI 63 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGN 122 WDTAGQERF ++T SYYRGA G +LVYDIT+ +++ ++ WL + A++++ +L GN Sbjct: 64 WDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGN 123 Query: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182 K D+D R V + + A+E+ + F ETSA N+E+AF+ A IL K E + E Sbjct: 124 KKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPE 183 Query: 183 NVD 185 + Sbjct: 184 RMG 186 >2GF9-A nrPDB Length = 189 Score = 239 bits (611), Expect = 5e-64, Method: Composition-based stats. Identities = 91/175 (52%), Positives = 125/175 (71%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60 + + D +FKLLLIG+S VGKT LFR++DD+F F+ST+GIDFK+KTV K+IKL Sbjct: 14 LVPRGSDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKL 73 Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120 QIWDTAGQER+ TITT+YYRGAMG +L+YDI N +SF + W I ++ ++ + +L+ Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILV 133 Query: 121 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175 GNKCD++D+RVVP G ++A + G FFE SAK NIN+++ F L + I K Sbjct: 134 GNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMN 188 >3CPJ-B nrPDB Length = 223 Score = 239 bits (610), Expect = 7e-64, Method: Composition-based stats. Identities = 87/195 (44%), Positives = 128/195 (65%), Gaps = 3/195 (1%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 YDLLFK++LIGDSGVGK+ +L RF+ + FN STIG++F +T+E++GK+IK QIW Sbjct: 8 YDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIW 67 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 DTAGQER+ IT++YYRGA+G ++VYDI+ S+EN + WL + E+A+++V L+GNK Sbjct: 68 DTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNK 127 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSEN 183 D+ R VP + + A+E+ + F ETSA + N++KAF L I +K + + Sbjct: 128 SDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMD--- 184 Query: 184 VDISSGGGVTGWKSK 198 + SS G S Sbjct: 185 LGDSSANGNANGASA 199 >2IEZ-A nrPDB Length = 220 Score = 238 bits (609), Expect = 1e-63, Method: Composition-based stats. Identities = 80/201 (39%), Positives = 128/201 (63%), Gaps = 11/201 (5%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGK---- 56 M YD L KLL +GDSGVGKT L+R++D+ FN FI+T+GIDF+ K V + Sbjct: 3 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADG 62 Query: 57 ------KIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH 110 K+ LQ+WDTAG ERF ++TT+++R AMG +L++D+T+ +SF N+ W+ + + Sbjct: 63 ASGKAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 122 Query: 111 A-NEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAED 169 A E+ + +L+GNK D+ D+R V + + ++A ++GI +FETSA N+EK+ TL + Sbjct: 123 AYCENPDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDL 182 Query: 170 ILRKTPVKEPNSENVDISSGG 190 I+++ ++ D +GG Sbjct: 183 IMKRMEKCVEKTQVPDTVNGG 203 >4RKF-A nrPDB Length = 190 Score = 238 bits (608), Expect = 1e-63, Method: Composition-based stats. Identities = 89/174 (51%), Positives = 129/174 (74%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61 A + +D +FKLL+IG+S VGKT LFR++DD+F + F+ST+GIDFK+KTV K++KLQ Sbjct: 16 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQ 75 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 IWDTAG ER+ TITT+YYRGAMG +L+YD+TN SF ++ W+ I ++ ++ + +L+G Sbjct: 76 IWDTAGLERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVG 135 Query: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175 NKCDM+D+RV+ +G Q+A + G+ FFETSAK N+N++ F L + I K Sbjct: 136 NKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMS 189 >2G6B-A nrPDB Length = 180 Score = 238 bits (607), Expect = 2e-63, Method: Composition-based stats. Identities = 91/172 (52%), Positives = 128/172 (74%), Gaps = 1/172 (0%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFN-TTFISTIGIDFKIKTVELQGKKIKLQIWD 64 YD+ FK++L+GDSGVGKTC+L RF D AF TFIST+GIDF+ K +++ G K+KLQ+WD Sbjct: 7 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWD 66 Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKC 124 TAGQERF ++T +YYR A ++L+YD+TN SF+NI WL I E+A DV MLLGNK Sbjct: 67 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKV 126 Query: 125 DMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPV 176 D +RVV + GE++A+E+G+ F ETSAK +N++ AF +A+++ R++ Sbjct: 127 DSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKRRSMK 178 >3RAB-A nrPDB Length = 169 Score = 237 bits (606), Expect = 2e-63, Method: Composition-based stats. Identities = 90/169 (53%), Positives = 124/169 (73%) Query: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64 +D +FK+L+IG+S VGKT LFR++DD+F F+ST+GIDFK+KT+ K+IKLQIWD Sbjct: 1 NFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWD 60 Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKC 124 TAGQER+ TITT+YYRGAMG +L+YDITN +SF + W I ++ ++ + +L+GNKC Sbjct: 61 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKC 120 Query: 125 DMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 DM+D+RVV +G Q+A G FFE SAK NIN+++ F L + I K Sbjct: 121 DMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEK 169 >3DZ8-A nrPDB Length = 191 Score = 237 bits (604), Expect = 3e-63, Method: Composition-based stats. Identities = 91/172 (52%), Positives = 125/172 (72%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 +D +FKLL+IG+S VGKT LFR++DD F F+ST+GIDFK+KTV K++KLQIW Sbjct: 18 GNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIW 77 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 DTAGQER+ TITT+YYRGAMG +L+YDITN +SF + W I ++ ++ + +L+GNK Sbjct: 78 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNK 137 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175 CDM+++RVVP KG+ +A + G FFE SAK NI++ +AF L + I K Sbjct: 138 CDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMS 189 >1Z0F-A nrPDB Length = 179 Score = 236 bits (602), Expect = 6e-63, Method: Composition-based stats. Identities = 76/171 (44%), Positives = 111/171 (64%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61 A Y +FK ++IGD GVGK+C+L +F++ F TIG++F + +E+ G+KIKLQ Sbjct: 8 APYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQ 67 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 IWDTAGQERF +T SYYRGA G ++VYDIT ++ ++S WL + N + +L+G Sbjct: 68 IWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIG 127 Query: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 NK D++ +R V + +Q A E+G+ F E SAK N+E AFL A+ I + Sbjct: 128 NKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQ 178 >2OCY-C nrPDB Length = 170 Score = 235 bits (601), Expect = 7e-63, Method: Composition-based stats. Identities = 99/171 (57%), Positives = 134/171 (78%), Gaps = 1/171 (0%) Query: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 D + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTV++ GKK+KLQ+WDTA Sbjct: 1 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 60 Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDM 126 GQERF TITT+YYRGAMGI+LVYD+T+ ++F NI +W + ++EHAN++ + +L+GNK DM Sbjct: 61 GQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM 120 Query: 127 DDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK 177 + RVV +GE +A+E GI F E+SAK + N+ + F TLA+ I K Sbjct: 121 ET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSN 170 >5XR6-A nrPDB Length = 194 Score = 233 bits (594), Expect = 5e-62, Method: Composition-based stats. Identities = 78/170 (45%), Positives = 111/170 (65%) Query: 3 KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQI 62 YD LFKL+LIGDSGVGK+ +L RF+ + FN STIG++F KT +++GK +K QI Sbjct: 19 SHMYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQI 78 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGN 122 WDTAGQER+ IT++YYRGA+G +L+YD+T +FEN ++WLR + H + ++ ML+GN Sbjct: 79 WDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGN 138 Query: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 KCD+ V + + A + F ETSA N+E AF + I + Sbjct: 139 KCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHK 188 >6IF2-B nrPDB Length = 186 Score = 231 bits (590), Expect = 1e-61, Method: Composition-based stats. Identities = 89/169 (52%), Positives = 131/169 (77%), Gaps = 1/169 (0%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 + YD LFKLL+IGDSGVGK+ +L RF+D+ F+ ++I+TIG+DFKI+TVE+ G+K+KLQIW Sbjct: 9 RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIW 68 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 DTAG ERF TIT++YYRG G+++VYD+T+ +SF N+ +WL I+++ +DV R+L+GNK Sbjct: 69 DTAGLERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNK 127 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 D +++VV + A + GI+ FETSAK N+N+E+ F + E +LR Sbjct: 128 NDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLR 176 >2IEY-A nrPDB Length = 195 Score = 231 bits (589), Expect = 2e-61, Method: Composition-based stats. Identities = 77/193 (39%), Positives = 124/193 (64%), Gaps = 11/193 (5%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGK---- 56 M YD L KLL +GDSGVGKT L+R++D+ FN FI+T+GIDF+ K V + Sbjct: 3 MTDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADG 62 Query: 57 ------KIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH 110 K+ LQ+WDTAG ERF ++TT+++R AMG +L++D+T+ +SF N+ W+ + + Sbjct: 63 ASGKAFKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 122 Query: 111 A-NEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAED 169 A E+ + +L+GNK D+ D+R V + + ++A ++GI +FETSA N+EK+ TL + Sbjct: 123 AYCENPDIVLIGNKADLPDQREVNERQARELAEKYGIPYFETSAATGQNVEKSVETLLDL 182 Query: 170 ILRKTPVKEPNSE 182 I+++ ++ Sbjct: 183 IMKRMEKCVEKTQ 195 >2EW1-A nrPDB Length = 201 Score = 231 bits (589), Expect = 2e-61, Method: Composition-based stats. Identities = 82/166 (49%), Positives = 119/166 (71%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61 + + YD LFK++LIG++GVGKTC++ RF+ F +TIG+DF IKTVE+ G+K+KLQ Sbjct: 19 SMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQ 78 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 IWDTAGQERF +IT SYYR A ++L YDIT +SF + +WLR I+++A+ V +L+G Sbjct: 79 IWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 138 Query: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167 NK D+ ++R V + + E+ + + + ETSAK + N+EK FL LA Sbjct: 139 NKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLA 184 >6HUF-A nrPDB Length = 182 Score = 230 bits (587), Expect = 3e-61, Method: Composition-based stats. Identities = 81/181 (44%), Positives = 123/181 (67%), Gaps = 1/181 (0%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61 + YD L K L +GDSGVGKT VL++++D FN+ FI+T+GIDF+ KT+ K+IKLQ Sbjct: 2 SDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQ 61 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHA-NEDVERMLL 120 +WDTAG ERF ++TT+++R AMG +L++D+TN +SF N+ W+ + HA +E+ + +L Sbjct: 62 LWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEESFLNVRNWISQLKTHAYSENPDIVLC 121 Query: 121 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180 GNK D++D+RVV + Q+A +GI +FETSA NI +A L + I+++ Sbjct: 122 GNKSDLEDERVVAAAEARQLAEHYGIPYFETSAANGTNISQAIEMLLDLIMKRMERSVDK 181 Query: 181 S 181 S Sbjct: 182 S 182 >2HUP-A nrPDB Length = 201 Score = 229 bits (585), Expect = 5e-61, Method: Composition-based stats. Identities = 82/172 (47%), Positives = 121/172 (70%), Gaps = 1/172 (0%) Query: 3 KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQI 62 + YD LFKL+L+GD+ VGKTCV+ RF AF+ STIG+DF +KT+E+QGK++KLQI Sbjct: 23 DEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQI 82 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGN 122 WDTAGQERF TIT SYYR A G +L YDIT SF ++ W+ ++ ++A ++ ++L+GN Sbjct: 83 WDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGN 142 Query: 123 KCDMDDKRVVPKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDILRK 173 K D+ + R V + + +A + I ETSAK + N+E+AFL +A +++ + Sbjct: 143 KSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMR 194 >4G01-B nrPDB Length = 181 Score = 228 bits (583), Expect = 9e-61, Method: Composition-based stats. Identities = 66/167 (39%), Positives = 99/167 (59%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL+L+GD G GK+ ++ RF D F STIG F +T+ + +K +IWDTAGQER Sbjct: 14 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 73 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKR 130 +H++ YYRGA ++V+D+TN SFE KW++ + N ++ L GNK D+ D R Sbjct: 74 YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALAGNKSDLLDAR 133 Query: 131 VVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK 177 V + A+E+G+ F ETSAK N+++ F +A + R P + Sbjct: 134 KVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTE 180 >2HEI-A nrPDB Length = 179 Score = 228 bits (582), Expect = 1e-60, Method: Composition-based stats. Identities = 67/172 (38%), Positives = 103/172 (59%), Gaps = 4/172 (2%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+L+G+S VGK+ ++ RF F+ STIG F ++V L +K +IWDTAGQE Sbjct: 9 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 68 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 R+H++ YYRGA ++VYDITN ++F W++ + A+ + L GNK D+ +K Sbjct: 69 RYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANK 128 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNS 181 R+V + + A ++ + F ETSAK +N+ FL +A +K P EP + Sbjct: 129 RMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIA----KKLPKSEPQN 176 >3TSO-A nrPDB Length = 178 Score = 228 bits (582), Expect = 1e-60, Method: Composition-based stats. Identities = 72/174 (41%), Positives = 114/174 (65%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 + Y+ +FK++LIG+SGVGKT +L RF+ + F+ +TIG++F +TV L +K QIW Sbjct: 5 EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIW 64 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 DTAG ER+ IT++YYRGA+G +LV+D+T +++ + +WL+ + +HA + ML+GNK Sbjct: 65 DTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNK 124 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK 177 D+ R VP + A +G+ F ETSA + N+E AF T+ ++I K + Sbjct: 125 SDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQ 178 >1X3S-A nrPDB Length = 195 Score = 228 bits (581), Expect = 1e-60, Method: Composition-based stats. Identities = 82/181 (45%), Positives = 118/181 (65%), Gaps = 2/181 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K+L+IG+SGVGK+ +L RF+DD F+ +TIG+DFK+KT+ + G K KL IWDTAGQE Sbjct: 16 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 75 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANE-DVERMLLGNKCDMDD 128 RF T+T SYYRGA G++LVYD+T +F + WL ++ + D+ ML+GNK D + Sbjct: 76 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKID-KE 134 Query: 129 KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISS 188 R V + +G + AR+H + F E SAK ++ AF L E I++ + E ++N SS Sbjct: 135 NREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNSGPSS 194 Query: 189 G 189 G Sbjct: 195 G 195 >3BC1-A nrPDB Length = 195 Score = 228 bits (581), Expect = 1e-60, Method: Composition-based stats. Identities = 79/192 (41%), Positives = 124/192 (64%), Gaps = 11/192 (5%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ------ 54 M+ YD L K L +GDSGVGKT VL++++D FN+ FI+T+GIDF+ K V + Sbjct: 3 MSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDG 62 Query: 55 ----GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH 110 G++I LQ+WDTAG ERF ++TT+++R AMG +L++D+TN +SF N+ W+ + H Sbjct: 63 AVGRGQRIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMH 122 Query: 111 A-NEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAED 169 A +E+ + +L GNK D++D+R V + + ++A ++GI +FETSA NI A L + Sbjct: 123 AYSENPDIVLCGNKSDLEDQRAVKEEEARELAEKYGIPYFETSAANGTNISHAIEMLLDL 182 Query: 170 ILRKTPVKEPNS 181 I+++ S Sbjct: 183 IMKRMERSVDKS 194 >3BFK-A nrPDB Length = 181 Score = 228 bits (581), Expect = 2e-60, Method: Composition-based stats. Identities = 84/174 (48%), Positives = 116/174 (66%), Gaps = 1/174 (0%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVEL-QGKKIKLQIWD 64 YD LFK++LIGDSGVGK+ +L RF+ D FN STIG++F K+++L K IK QIWD Sbjct: 4 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWD 63 Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKC 124 TAGQER+ IT++YYRGA+G +LVYDIT SFENI KWL+ + ++A+ ++ +L+GNK Sbjct: 64 TAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNADSNIVILLVGNKS 123 Query: 125 DMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178 D+ RV+ Q A++ + F ETSA N+E AF L +I K+ Sbjct: 124 DLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYNVRQKKQ 177 >1TU4-A nrPDB Length = 171 Score = 227 bits (578), Expect = 3e-60, Method: Composition-based stats. Identities = 64/163 (39%), Positives = 102/163 (62%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+L+G+S VGK+ ++ RF F+ STIG F +TV L +K +IWDTAGQE Sbjct: 8 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 67 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 R+H++ YYRGA ++VYDITN +SF W++ + A+ ++ L GNK D+ +K Sbjct: 68 RYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANK 127 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 R V + + A ++ + F ETSAK ++N+ + F+ +A+ + + Sbjct: 128 RAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 170 >3RWM-B nrPDB Length = 185 Score = 227 bits (578), Expect = 4e-60, Method: Composition-based stats. Identities = 81/175 (46%), Positives = 117/175 (66%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 YD LFK++LIGDSGVGK+ +L RF+ D FN STIG++F +T+E++ KKIK QIW Sbjct: 5 YDYDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIW 64 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 DTAG ER+ IT++YYRGA+G ++VYDI+ S+EN + WL + E+A+++V L+GNK Sbjct: 65 DTAGLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNK 124 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178 D+ R VP + + A E+ + F ETSA + N++KAF L I + + Sbjct: 125 SDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAIFQMVSKHQ 179 >2IL1-A nrPDB Length = 192 Score = 225 bits (575), Expect = 8e-60, Method: Composition-based stats. Identities = 89/174 (51%), Positives = 132/174 (75%), Gaps = 1/174 (0%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61 + + D ++++IG GVGKT ++ RF+DD F ST+G+DFKIKTVEL+GKKI+LQ Sbjct: 19 SPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQ 78 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 IWDTAGQERF++IT++YYR A GI+LVYDIT ++F+++ KW++ ID++A+ED E +L+G Sbjct: 79 IWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVG 138 Query: 122 NKCDMDDKRVVPKGKGEQIAREH-GIRFFETSAKANINIEKAFLTLAEDILRKT 174 NK D + R + + +GE+ A++ G+RF E SAK N N+++ FL L +DIL+K Sbjct: 139 NKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKM 192 >4KYI-B nrPDB Length = 170 Score = 223 bits (570), Expect = 3e-59, Method: Composition-based stats. Identities = 62/161 (38%), Positives = 97/161 (60%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+L+G+S VGK+ ++ RF F+ STIG F +TV L +K +IWDTAG E Sbjct: 10 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGLE 69 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 R+H++ YYRGA ++VYDITN +F W++ + A+ ++ L GNK D+ K Sbjct: 70 RYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASK 129 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 R V + + A ++ + F ETSAK +N+ + F+ +A+ + Sbjct: 130 RAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKL 170 >2FG5-A nrPDB Length = 192 Score = 216 bits (552), Expect = 3e-57, Method: Composition-based stats. Identities = 69/161 (42%), Positives = 95/161 (59%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K+ L+GD+GVGK+ ++ RF D F+ TIG F KTV + K IWDTAGQE Sbjct: 24 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 83 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 RFH++ YYRG+ ++VYDIT SF + KW++ + EH E++ + GNKCD+ D Sbjct: 84 RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDI 143 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 R VP ++ A G ETSAK INIE+ F ++ I Sbjct: 144 REVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQI 184 >1EK0-A nrPDB Length = 170 Score = 216 bits (552), Expect = 4e-57, Method: Composition-based stats. Identities = 65/164 (39%), Positives = 98/164 (59%), Gaps = 3/164 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 KL+L+G++ VGK+ ++ RF + F TIG F + V + +K +IWDTAGQE Sbjct: 4 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQE 63 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDD- 128 RF ++ YYR A ++VYD+T +SF W++ + E A++D+ L+GNK DM Sbjct: 64 RFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQE 123 Query: 129 --KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 +R V + +GE++A E G+ FFETSAK N+ FL + E I Sbjct: 124 GGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKI 167 >2FFQ-A nrPDB Length = 171 Score = 216 bits (551), Expect = 5e-57, Method: Composition-based stats. Identities = 73/163 (44%), Positives = 108/163 (66%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+ +G+ VGKT ++ RF D+F+ T+ +TIGIDF KT+ L+ + ++LQ+WDTAGQE Sbjct: 3 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 62 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 RF ++ SY R + ++VYDITN SF+ SKW+ ++ DV ML+GNK D+ DK Sbjct: 63 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADK 122 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 R + +GEQ A+E + F ETSAK N+++ F +A +L Sbjct: 123 RQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALLE 165 >1YVD-A nrPDB Length = 169 Score = 216 bits (551), Expect = 5e-57, Method: Composition-based stats. Identities = 64/161 (39%), Positives = 95/161 (59%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K+ L+GD+GVGK+ +++RF +D+F+ TIG F KTV+ Q + K IWDTAGQE Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQE 65 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 RF + YYRG+ ++VYDIT ++F + W+R + +H + + GNKCD+ D Sbjct: 66 RFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDV 125 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 R V + + A F ETSAK INI + F+ ++ I Sbjct: 126 REVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 166 >1D5C-A nrPDB Length = 162 Score = 215 bits (549), Expect = 9e-57, Method: Composition-based stats. Identities = 73/161 (45%), Positives = 103/161 (63%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +KL+ +G+ VGKT ++ RF D F+ + STIGIDF KT+ L ++LQ+WDTAGQE Sbjct: 2 YKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQE 61 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 RF ++ SY R + ++VYDITN +SFEN +KW+++I +DV L+GNK D+ D Sbjct: 62 RFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNERGKDVIIALVGNKTDLGDL 121 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 R V +G Q A+E+ F ETSAKA NI+ F A + Sbjct: 122 RKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVLFKKTASKL 162 >4QXA-A nrPDB Length = 208 Score = 214 bits (546), Expect = 2e-56, Method: Composition-based stats. Identities = 61/175 (34%), Positives = 103/175 (58%), Gaps = 6/175 (3%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 LFK++L+GD GVGK+ ++ R+ + F++ TIG++F K +E+ G + +QIWDTAG Sbjct: 8 LFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGL 67 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLGNKC 124 ERF ++ T +YRG+ +L + + + +SF+N+S W + +A+ E ++LGNK Sbjct: 68 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKT 127 Query: 125 DMDDKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178 D+ + R V + + +++G +FETSAK + N+ AF IL E Sbjct: 128 DIKE-RQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSE 181 >1WMS-A nrPDB Length = 177 Score = 213 bits (544), Expect = 3e-56, Method: Composition-based stats. Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 6/168 (3%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 LFK++L+GD GVGK+ ++ R+ + F+T TIG++F K +E+ G + +QIWDTAGQ Sbjct: 7 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQ 66 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLGNKC 124 ERF ++ T +YRG+ +L + + + +SF+N+S W + +A+ E ++LGNK Sbjct: 67 ERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKI 126 Query: 125 DMDDKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDIL 171 D+ + R V + + R++G +FETSAK N+ AF +L Sbjct: 127 DISE-RQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 173 >1Z06-A nrPDB Length = 189 Score = 213 bits (544), Expect = 3e-56, Method: Composition-based stats. Identities = 69/173 (39%), Positives = 106/173 (61%), Gaps = 5/173 (2%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 + +FK+++IGDS VGKTC+ +RF F +TIG+DF+ + V++ G++IK+Q+W Sbjct: 15 GSRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLW 74 Query: 64 DTAGQERFH-TITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH-ANEDVERMLLG 121 DTAGQERF ++ YYR ++ VYD+TN SF ++ W+ +H D+ R+L+G Sbjct: 75 DTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVG 134 Query: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAK---ANINIEKAFLTLAEDIL 171 NKCD+ VP ++ A H + FETSAK N ++E F+TLA + Sbjct: 135 NKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLK 187 >2G77-B nrPDB Length = 198 Score = 213 bits (542), Expect = 5e-56, Method: Composition-based stats. Identities = 69/174 (39%), Positives = 105/174 (60%), Gaps = 5/174 (2%) Query: 3 KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQI 62 +FK+++IGDS VGKTC+ +RF F +TIG+DF+ + V++ G++IK+Q+ Sbjct: 23 PPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQL 82 Query: 63 WDTAGQERFH-TITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH-ANEDVERMLL 120 WDTAGQERF ++ YYR ++ VYD+TN SF ++ W+ +H D+ R+L+ Sbjct: 83 WDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILV 142 Query: 121 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAK---ANINIEKAFLTLAEDIL 171 GNKCD+ VP ++ A H + FETSAK N ++E F+TLA + Sbjct: 143 GNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLAHKLK 196 >2GIL-A nrPDB Length = 162 Score = 213 bits (542), Expect = 5e-56, Method: Composition-based stats. Identities = 72/161 (44%), Positives = 108/161 (67%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+ +G+ VGKT ++ RF D+F+ T+ +TIGIDF KT+ L+ + ++LQ+WDTAGQE Sbjct: 2 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 61 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 RF ++ SY R + ++VYDITN SF+ +KW+ ++ DV ML+GNK D+ DK Sbjct: 62 RFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADK 121 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 R V +GE+ A+E + F ETSAKA N+++ F +A + Sbjct: 122 RQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 162 >5LEF-A nrPDB Length = 191 Score = 212 bits (540), Expect = 8e-56, Method: Composition-based stats. Identities = 71/161 (44%), Positives = 107/161 (66%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+ +G+ VGKT ++ RF D+F+ T+ +TIGIDF KT+ L+ + ++LQ+WDTAG E Sbjct: 10 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGLE 69 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 RF ++ SY R + ++VYDITN SF+ +KW+ ++ DV ML+GNK D+ DK Sbjct: 70 RFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADK 129 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 R V +GE+ A+E + F ETSAKA N+++ F +A + Sbjct: 130 RQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 170 >4KLZ-A nrPDB Length = 173 Score = 212 bits (540), Expect = 9e-56, Method: Composition-based stats. Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 2/165 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +KL+++G GVGK+ + +F F TI +KI+ + + + L I DTAGQ Sbjct: 6 YKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIR-IRIDDEPANLDILDTAGQA 64 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI-DEHANEDVERMLLGNKCDMDD 128 F + Y R G ++ Y IT+ +SF + ++ + I +D +L+GNK D+ Sbjct: 65 EFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQ 124 Query: 129 KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 R V K +G +ARE FFETSA I+ F L +I RK Sbjct: 125 LRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRK 169 >5YOZ-A nrPDB Length = 177 Score = 211 bits (537), Expect = 2e-55, Method: Composition-based stats. Identities = 64/161 (39%), Positives = 100/161 (62%), Gaps = 1/161 (0%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 K++++G+SG GK+ + RF+ + F +TIG F KTV + G+ +K +IWDTAG ER Sbjct: 17 KIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTAGLER 76 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKR 130 F ++ YYRGA G ++VYDITN +S + W++ + +A+ + +L+GNK D+ R Sbjct: 77 FRSLAPIYYRGASGALVVYDITNSESLKKAQTWIKELRANADPSLIIVLVGNKKDLGSLR 136 Query: 131 VVPKGKGEQI-AREHGIRFFETSAKANINIEKAFLTLAEDI 170 V G+++ A E F+E SAK N N+E+ FL LA + Sbjct: 137 QVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLAAKL 177 >2OCB-A nrPDB Length = 180 Score = 210 bits (534), Expect = 5e-55, Method: Composition-based stats. Identities = 62/177 (35%), Positives = 101/177 (57%), Gaps = 6/177 (3%) Query: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 LL K++L+GD GVGK+ ++ R+ + F++ TIG++F + +E+ G+ + LQIWDTA Sbjct: 5 SLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTA 64 Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLGN 122 GQERF ++ T +YRGA +L + + + +SFEN+ W + +A+ E ++LGN Sbjct: 65 GQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGN 124 Query: 123 KCDMDDKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178 K D + R V + + E+G + ETSAK + N+ AF +L E Sbjct: 125 KVD-KEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLE 180 >1YZU-A nrPDB Length = 170 Score = 209 bits (532), Expect = 8e-55, Method: Composition-based stats. Identities = 61/169 (36%), Positives = 101/169 (59%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 + FK++L+G+ VGKT ++ R+ ++ FN I+T+ F K + + GK++ L IW Sbjct: 1 GSRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIW 60 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 DTAGQERFH + YYR + G +LVYDIT+ SF+ + W++ + + ++ ++GNK Sbjct: 61 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNK 120 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 D++ +R V + E A G + + TSAK N IE+ FL L + ++ Sbjct: 121 IDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIE 169 >4CZ2-A nrPDB Length = 230 Score = 206 bits (526), Expect = 3e-54, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 119/206 (57%), Gaps = 9/206 (4%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK-IKLQI 62 +T + LFK+L+IG+ GVGKT ++ R+ F+ + +TIG+DF +K + + ++LQ+ Sbjct: 25 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 84 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERM 118 WD AG ERF +T YY+ AMG +V+DI+ +FE + KW ++D + + + Sbjct: 85 WDIAGLERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 144 Query: 119 LLGNKCDMDDKRVVPKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL---RKT 174 LL NKCD + + + +Q +EHG +FETSAK NINIE+A L E +L + Sbjct: 145 LLANKCDQNKDSSMSPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKMLVNHQSF 204 Query: 175 PVKEPNSENVDISSGGGVTGWKSKCC 200 P +E + + + + KS+CC Sbjct: 205 PNEENDVDKIKLDQETLRAENKSQCC 230 >5CM8-B nrPDB Length = 203 Score = 206 bits (526), Expect = 4e-54, Method: Composition-based stats. Identities = 56/173 (32%), Positives = 96/173 (55%), Gaps = 2/173 (1%) Query: 3 KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQI 62 L K++++G GVGK+ + +F D F + T ++ K V L G+++++ I Sbjct: 7 PTAGPALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEEVQIDI 65 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLG 121 DTAGQE + I +Y+R G + V+ IT+ +SF+ ++ I N E + +L+G Sbjct: 66 LDTAGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVG 125 Query: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 NKCD++DKR VP + + A++ + + ETSAK N++K F L +I + Sbjct: 126 NKCDLNDKRKVPLSECQLRAQQWAVPYVETSAKTRENVDKVFFDLMREIRSRK 178 >4M8N-E nrPDB Length = 199 Score = 206 bits (524), Expect = 6e-54, Method: Composition-based stats. Identities = 57/163 (34%), Positives = 92/163 (56%), Gaps = 3/163 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +KL+++G GVGK+ + +F F + TI ++ K VE+ ++ L+I DTAG E Sbjct: 7 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDAQQCMLEILDTAGTE 65 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDD 128 +F + Y + G LVY IT +F ++ I + +DV +L+GNKCD++D Sbjct: 66 QFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLED 125 Query: 129 KRVVPKGKGEQIAREH-GIRFFETSAKANINIEKAFLTLAEDI 170 +RVV K +G+ +AR+ F E+SAK+ IN+ + F L I Sbjct: 126 ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 168 >5LDD-C nrPDB Length = 207 Score = 205 bits (523), Expect = 7e-54, Method: Composition-based stats. Identities = 66/199 (33%), Positives = 117/199 (58%), Gaps = 6/199 (3%) Query: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67 +L K++++GDSGVGKT ++ ++ + F+ ++ +TIG DF + V + +++ +Q+WDTAG Sbjct: 9 VLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTAG 68 Query: 68 QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLGNK 123 QERF ++ ++YRGA +LV+D+ N KSF+ + W A+ E+ ++LG K Sbjct: 69 QERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPENFPFVVLGIK 128 Query: 124 CDMDD-KRVVPKGKGEQIAREH-GIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNS 181 D+++ KRV+ + + + GI +FETSAK IN+E+AF +A + L + +E + Sbjct: 129 IDVEESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNALMQEESEEFSG 188 Query: 182 ENVDISSGGGVTGWKSKCC 200 + D + C Sbjct: 189 DFQDPINIHIENERDGCAC 207 >2P5S-A nrPDB Length = 199 Score = 204 bits (520), Expect = 2e-53, Method: Composition-based stats. Identities = 74/171 (43%), Positives = 113/171 (66%), Gaps = 6/171 (3%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +K++L GD+ VGK+ L R + F +T+G+DF++KT+ + G++ LQ+WDTAGQE Sbjct: 29 YKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQE 88 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDD- 128 RF +I SY+R A G++L+YD+T KSF NI +W+ I++ A+E V ML+GNK D+ D Sbjct: 89 RFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAHETVPIMLVGNKADIRDT 148 Query: 129 -----KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 ++ VP GE++A +G F ETSAK NI +A L LA ++ ++T Sbjct: 149 AATEGQKCVPGHFGEKLAMTYGALFCETSAKDGSNIVEAVLHLAREVKKRT 199 >2J0V-A nrPDB Length = 212 Score = 203 bits (517), Expect = 4e-53, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 12/199 (6%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61 + + K + +GD VGKTC+L ++ + F T +I T+ +F V + G+ + L Sbjct: 2 SHMSVSKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVAVDGQIVNLG 60 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLL 120 +WDTAGQE + + YRGA +L + + + S+EN+ KW+ + A +V +L+ Sbjct: 61 LWDTAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFA-PNVPIVLV 119 Query: 121 GNKCDMDDKR--------VVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDIL 171 G K D+ D + V+ +GE++ ++ G + E S+K N++ F T + +L Sbjct: 120 GTKLDLRDDKGYLADHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVL 179 Query: 172 RKTPVKEPNSENVDISSGG 190 + KE + G Sbjct: 180 QPPRRKEVPRRRKNHRRSG 198 >2KE5-A nrPDB Length = 174 Score = 203 bits (516), Expect = 5e-53, Method: Composition-based stats. Identities = 54/171 (31%), Positives = 94/171 (54%), Gaps = 3/171 (1%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 L K++++G GVGK+ + +F D F + T ++ K V L G+++++ I DTAG Sbjct: 3 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEEVQIDILDTAGL 61 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANE--DVERMLLGNKCDM 126 E + I +Y+R G +LV+ IT +SF +++ I E + +++GNK D+ Sbjct: 62 EDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDL 121 Query: 127 DDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK 177 +++R VP + A E G+++ ETSAK N++K F L +I K + Sbjct: 122 EERRQVPVEEARSKAEEWGVQYVETSAKTRANVDKVFFDLMREIRTKKMSE 172 >4DXA-A nrPDB Length = 169 Score = 202 bits (515), Expect = 7e-53, Method: Composition-based stats. Identities = 58/165 (35%), Positives = 93/165 (56%), Gaps = 3/165 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +KL+++G GVGK+ + +F F + TI ++ K VE+ ++ L+I DTAG E Sbjct: 6 YKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDAQQCMLEILDTAGTE 64 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDD 128 +F + Y + G LVY IT +F ++ I + +DV +L+GNKCD++D Sbjct: 65 QFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLED 124 Query: 129 KRVVPKGKGEQIAREH-GIRFFETSAKANINIEKAFLTLAEDILR 172 +RVV K +G+ +AR+ F E+SAK+ IN+ + F L I R Sbjct: 125 ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINR 169 >1ZC4-A nrPDB Length = 175 Score = 201 bits (512), Expect = 1e-52, Method: Composition-based stats. Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 2/168 (1%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 L K++++G GVGK+ + +F D F + T ++ K V L G+++++ I DTAG Sbjct: 6 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEEVQIDILDTAGL 64 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI-DEHANEDVERMLLGNKCDMD 127 E + I +Y+R G + V+ IT +SF + + I +E+V +L+GNK D++ Sbjct: 65 EDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLE 124 Query: 128 DKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175 DKR V + + A + + + ETSAK N++K F L +I + Sbjct: 125 DKRQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREIRARKM 172 >6IYB-A nrPDB Length = 199 Score = 200 bits (509), Expect = 3e-52, Method: Composition-based stats. Identities = 64/184 (34%), Positives = 110/184 (59%), Gaps = 7/184 (3%) Query: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67 +L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V + + + +QIWDTAG Sbjct: 12 VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 71 Query: 68 QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVERMLLGNK 123 ERF + ++YRGA +LV+D+T +F+ + W A+ E+ ++LGNK Sbjct: 72 LERFQS-GVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNK 130 Query: 124 CDMDDKRVVPKGKGEQIA-REHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182 D+++ R V + + ++ I +FETSAK IN+E+AF T+A + L++ E +E Sbjct: 131 IDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNE 189 Query: 183 NVDI 186 + Sbjct: 190 FPEP 193 >3TH5-A nrPDB Length = 204 Score = 199 bits (507), Expect = 7e-52, Method: Composition-based stats. Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 16/176 (9%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K +++GD VGKTC+L ++ +AF +I T+ ++ V + GK + L +WDTAGQE Sbjct: 31 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDGKPVNLGLWDTAGQE 89 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMDD 128 + + Y ++ + + + SFEN+ KW + H + +L+G K D+ D Sbjct: 90 DYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHC-PNTPIILVGTKLDLRD 148 Query: 129 KR------------VVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDIL 171 + + +G +A+E G +++ E SA ++ F +L Sbjct: 149 DKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 204 >4PHF-A nrPDB Length = 184 Score = 198 bits (505), Expect = 1e-51, Method: Composition-based stats. Identities = 73/180 (40%), Positives = 115/180 (63%), Gaps = 8/180 (4%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI-K 59 M+ + ++L K++++GDSGVGKT ++ R+ +D ++ + +TIG DF K V + G K+ Sbjct: 3 MSSRKKNIL-KVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVAT 61 Query: 60 LQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDV 115 +Q+WDTAGQERF ++ ++YRGA +LVYD+TN SFENI W HAN E Sbjct: 62 MQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETF 121 Query: 116 ERMLLGNKCDMDD-KRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRK 173 ++LGNK D ++ K++V + +++A+ G I F TSAK IN++ AF +A L++ Sbjct: 122 PFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ 181 >5C2K-A nrPDB Length = 415 Score = 198 bits (504), Expect = 1e-51, Method: Composition-based stats. Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 16/192 (8%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61 + + KL+++GD GKTC+L FS D F ++ T+ ++ + +E+ GK+++L Sbjct: 5 SSGMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELA 63 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLL 120 +WDTAGQE + + Y I++ + I + S ENI KW + H +V +L+ Sbjct: 64 LWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILV 122 Query: 121 GNKCDMDD------------KRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLA 167 GNK D+ + + V +G +A G + E SAK + + F Sbjct: 123 GNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMAT 182 Query: 168 EDILRKTPVKEP 179 L+ K+ Sbjct: 183 RAALQARRGKKK 194 >2WBL-C nrPDB Length = 180 Score = 197 bits (502), Expect = 2e-51, Method: Composition-based stats. Identities = 53/177 (29%), Positives = 91/177 (51%), Gaps = 14/177 (7%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 K + +GD VGKTC+L ++ + F T ++ T+ +F V + G + L +WDTAGQ Sbjct: 6 FIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDMD 127 E ++ + YRGA +L + + + S+ENI KWL + +A + +L+G K D+ Sbjct: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYA-PGIPIVLVGTKLDLR 123 Query: 128 DKRV----------VPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRK 173 D + + +GE++ + G +R+ E S+K N++ F T LR Sbjct: 124 DDKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVALRP 180 >2NTY-C nrPDB Length = 180 Score = 196 bits (500), Expect = 3e-51, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 14/181 (7%) Query: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64 + K + +GD VGKTC+L ++ + F T ++ T+ +F V + G + L +WD Sbjct: 2 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNTVNLGLWD 60 Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNK 123 TAGQE ++ + YRGA +L + + + S+EN+ KW+ + +A V +L+G K Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTK 119 Query: 124 CDMDDKRV----------VPKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDILR 172 D+ D + + +GE++ + G + E S+K N++ F + +L+ Sbjct: 120 LDLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVLQ 179 Query: 173 K 173 Sbjct: 180 P 180 >3RYT-C nrPDB Length = 180 Score = 196 bits (500), Expect = 4e-51, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 16/182 (8%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 + K +++GD VGKTC+L ++ +AF +I T+ ++ V + GK + L +W Sbjct: 1 GPHMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDGKPVNLGLW 59 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGN 122 DTAG E + + Y ++ + + + SFEN+ KW + H + +L+G Sbjct: 60 DTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHC-PNTPIILVGT 118 Query: 123 KCDMDDKR------------VVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAED 169 K D+ D + + +G +A+E G +++ E SA ++ F Sbjct: 119 KLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRA 178 Query: 170 IL 171 +L Sbjct: 179 VL 180 >2ERX-A nrPDB Length = 172 Score = 196 bits (500), Expect = 4e-51, Method: Composition-based stats. Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 3/167 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +++ + G GVGK+ ++ RF F ++I T+ ++ + + LQI DT G Sbjct: 4 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYR-QVISCDKSICTLQITDTTGSH 62 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN--EDVERMLLGNKCDMD 127 +F + +LVY IT+ +S E + I E E + ML+GNKCD Sbjct: 63 QFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDES 122 Query: 128 DKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 R V + E +AR F ETSAK N N+++ F L R+T Sbjct: 123 PSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRRT 169 >5ZHX-e nrPDB Length = 198 Score = 196 bits (498), Expect = 6e-51, Method: Composition-based stats. Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 16/183 (8%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL+++GD GKTC+L FS D F ++ T+ ++ + +E+ GK+++L +WDTAGQE Sbjct: 12 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 70 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMDD- 128 + + Y I++ + I + S ENI KW + H +V +L+GNK D+ + Sbjct: 71 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 129 Query: 129 -----------KRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTPV 176 + V +G +A G + E SAK + + F L+ Sbjct: 130 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRG 189 Query: 177 KEP 179 K+ Sbjct: 190 KKK 192 >2WKQ-A nrPDB Length = 332 Score = 196 bits (498), Expect = 7e-51, Method: Composition-based stats. Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 16/186 (8%) Query: 3 KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQI 62 + L K +++GD VGKTC+L ++ +AF +I T+ ++ V + GK + L + Sbjct: 149 DEAAKELIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDGKPVNLGL 207 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLG 121 WDTAG E + + Y ++ + + + SF ++ KW + H + +L+G Sbjct: 208 WDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHC-PNTPIILVG 266 Query: 122 NKCDMDDKR------------VVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAE 168 K D+ D + + +G +A+E G +++ E SA ++ F Sbjct: 267 TKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIR 326 Query: 169 DILRKT 174 +L Sbjct: 327 AVLCPP 332 >1Z22-A nrPDB Length = 168 Score = 195 bits (496), Expect = 1e-50, Method: Composition-based stats. Identities = 57/167 (34%), Positives = 98/167 (58%), Gaps = 1/167 (0%) Query: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 ++ K++++G+ VGK+ ++ R+ F + TIG+DF + +++ + ++L +WDTA Sbjct: 3 EVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTA 62 Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDM 126 GQE F IT +YYRGA +LV+ T+ +SFE IS W + D+ L+ NK D+ Sbjct: 63 GQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVG-DIPTALVQNKIDL 121 Query: 127 DDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 D + + E +A+ +RF+ TS K ++N+ + F LAE L+K Sbjct: 122 LDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKHLQK 168 >3BWD-D nrPDB Length = 182 Score = 195 bits (495), Expect = 2e-50, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 91/183 (49%), Gaps = 14/183 (7%) Query: 3 KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQI 62 + K + +GD VGKTC+L ++ + F T ++ T+ +F V + G + L + Sbjct: 2 SMSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VNGATVNLGL 60 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLG 121 WDTAGQE ++ + YRGA +L + + + S+EN+ KW+ + +A V +L+G Sbjct: 61 WDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-PGVPIVLVG 119 Query: 122 NKCDMDDKRV----------VPKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDI 170 K D+ D + + +GE++ + G + E S+K+ N++ F + Sbjct: 120 TKLDLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVV 179 Query: 171 LRK 173 L+ Sbjct: 180 LQP 182 >5UWI-A nrPDB Length = 237 Score = 194 bits (494), Expect = 2e-50, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 103/187 (55%), Gaps = 8/187 (4%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61 A+ + FKL+L+GD G GKT + R F +++T+G++ IK Sbjct: 24 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFN 83 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 +WDTAGQE+F + YY A ++++D+T+ +++N+ W R++ E++ +L G Sbjct: 84 VWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVC-ENIPIVLCG 142 Query: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNS 181 NK D+ D++V K K R+ +++++ SAK+N N EK FL LA ++ +PN Sbjct: 143 NKVDIKDRKV--KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLI-----GDPNL 195 Query: 182 ENVDISS 188 E V + + Sbjct: 196 EFVAMPA 202 >5CLL-A nrPDB Length = 191 Score = 194 bits (494), Expect = 2e-50, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 103/187 (55%), Gaps = 8/187 (4%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61 A+ + FKL+L+GD G GKT + R F +++T+G++ IK Sbjct: 3 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFN 62 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 +WDTAGQE+F + YY A ++++D+T+ +++N+ W R++ E++ +L G Sbjct: 63 VWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVC-ENIPIVLCG 121 Query: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNS 181 NK D+ D++V K K R+ +++++ SAK+N N EK FL LA ++ +PN Sbjct: 122 NKVDIKDRKV--KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLI-----GDPNL 174 Query: 182 ENVDISS 188 E V + + Sbjct: 175 EFVAMPA 181 >2N1B-A nrPDB Length = 261 Score = 194 bits (494), Expect = 2e-50, Method: Composition-based stats. Identities = 59/187 (31%), Positives = 103/187 (55%), Gaps = 8/187 (4%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61 A+ + FKL+L+GD G GKT + R F +++T+G++ IK Sbjct: 44 AQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFN 103 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 +WDTAGQE+F + YY A ++++D+T+ +++N+ W R++ E++ +L G Sbjct: 104 VWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVC-ENIPIVLCG 162 Query: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNS 181 NK D+ D++V K K R+ +++++ SAK+N N EK FL LA ++ +PN Sbjct: 163 NKVDIKDRKV--KAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLI-----GDPNL 215 Query: 182 ENVDISS 188 E V + + Sbjct: 216 EFVAMPA 222 >2ATX-A nrPDB Length = 194 Score = 193 bits (492), Expect = 3e-50, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 16/185 (8%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60 MA L+ K +++GD VGKTC+L +++DAF ++ T+ + + +V + GK+ L Sbjct: 10 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAV-SVTVGGKQYLL 68 Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERML 119 ++DTAGQE + + Y ++ + + N SF+N+ +W+ + E+A +V +L Sbjct: 69 GLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYA-PNVPFLL 127 Query: 120 LGNKCDMDD------------KRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTL 166 +G + D+ D ++ + +G+++A+E G + E SA ++ F Sbjct: 128 IGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEA 187 Query: 167 AEDIL 171 IL Sbjct: 188 IIAIL 192 >4U5X-A nrPDB Length = 178 Score = 193 bits (492), Expect = 4e-50, Method: Composition-based stats. Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 14/176 (7%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 K + +GD VGKTC+L ++ + F T +I T+ +F V + G + L +WDTAG Sbjct: 5 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFS-ANVSVDGSVVNLGLWDTAGL 63 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDMD 127 E + + YRGA +L + + + S+EN+ KW+ + A V +L+G K D+ Sbjct: 64 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-PGVPVVLVGTKLDLR 122 Query: 128 DKRV----------VPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILR 172 + R + +GE++ + G + + E S+K NI+ F T + +L+ Sbjct: 123 EDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 178 >4KU4-A nrPDB Length = 206 Score = 193 bits (491), Expect = 5e-50, Method: Composition-based stats. Identities = 51/194 (26%), Positives = 93/194 (47%), Gaps = 20/194 (10%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60 ++ + K+ ++G+ GVGKT + + F+ T+ T+ ++ + V + G L Sbjct: 6 LSPGAGKITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCV-IDGIPSHL 64 Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE----------- 109 +I DTAGQE + + + R ++V+D+T SFE + + + Sbjct: 65 EILDTAGQEEYGALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQTKRKLDETRRH 124 Query: 110 ---HANEDVE-----RMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEK 161 +D+ +L+GNKCD+D +R V +G +A++ G F ETSAK N+E+ Sbjct: 125 PGDRHPDDLPFAPSLVVLVGNKCDLDTRREVGTLEGSSLAKKLGCGFVETSAKLGTNVEE 184 Query: 162 AFLTLAEDILRKTP 175 AF ++ R+ Sbjct: 185 AFFSVVRADRRRKR 198 >5WDR-A nrPDB Length = 171 Score = 193 bits (490), Expect = 5e-50, Method: Composition-based stats. Identities = 50/152 (32%), Positives = 80/152 (52%), Gaps = 2/152 (1%) Query: 22 KTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRG 81 K+ + + F T + TI ++ K V + + L I DTAGQE + + Y R Sbjct: 20 KSALTIQLIQQHFVTEYDPTIEDSYR-KHVSIDDEACLLDILDTAGQEDYSAMRDQYMRT 78 Query: 82 AMGIMLVYDITNGKSFENISKWLRNIDEHANED-VERMLLGNKCDMDDKRVVPKGKGEQI 140 G + VY I + +S + I + I ++D V +L+GNKCD+++ R V G+ + Sbjct: 79 GEGFLCVYSIDSQQSLDEIHSFREQILRVKDQDEVPMILVGNKCDLEEHREVSTEAGQAV 138 Query: 141 AREHGIRFFETSAKANINIEKAFLTLAEDILR 172 A+ + I F ETSAK IN+E+AF L +I + Sbjct: 139 AKSYSIPFMETSAKKRINVEEAFYQLVREIRK 170 >5JCP-B nrPDB Length = 419 Score = 193 bits (490), Expect = 5e-50, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 16/176 (9%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL+++GD GKTC+L S D F ++ T+ ++ + +E+ GK+++L +WDTAGQE Sbjct: 245 KLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 303 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMDD- 128 + + Y I++ + I + S ENI KW + H +V +L+GNK D+ + Sbjct: 304 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 362 Query: 129 -----------KRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILR 172 + V +G +A G + E SAK + + F L+ Sbjct: 363 EHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 418 >2FN4-A nrPDB Length = 181 Score = 192 bits (488), Expect = 1e-49, Method: Composition-based stats. Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 2/161 (1%) Query: 22 KTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRG 81 K+ + +F F + + TI + K + G +L I DTAGQE F + Y R Sbjct: 22 KSALTIQFIQSYFVSDYDPTIEDSY-TKICSVDGIPARLDILDTAGQEEFGAMREQYMRA 80 Query: 82 AMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDDKRVVPKGKGEQI 140 G +LV+ I + +SF + K I + +D +L+GNK D++ +R VP+ + Sbjct: 81 GHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAF 140 Query: 141 AREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNS 181 H + +FE SAK +N+++AF L + + + P S Sbjct: 141 GASHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQEQELPPS 181 >2W2X-A nrPDB Length = 185 Score = 191 bits (485), Expect = 2e-49, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 16/180 (8%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 K +++GD VGKTC+L ++ +AF +I T+ ++ V + K + L +WDT Sbjct: 6 GSQAIKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYS-ANVMVDSKPVNLGLWDT 64 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKC 124 AGQE + + Y ++ + + + S+EN+ KW + H +L+G K Sbjct: 65 AGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHC-PSTPIILVGTKL 123 Query: 125 DMDDKR------------VVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDIL 171 D+ D + + +G +A+E +++ E SA ++ F +L Sbjct: 124 DLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVL 183 >2G3Y-A nrPDB Length = 211 Score = 190 bits (484), Expect = 3e-49, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 89/186 (47%), Gaps = 9/186 (4%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRF--SDDAFNTTFISTIGIDFKIKTVELQGKK- 57 ++ ++ + ++++LIG+ GVGK+ + F D+ ++ +G D +T+ + G+ Sbjct: 29 ISSESGNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSD-CEVLGEDTYERTLMVDGESA 87 Query: 58 --IKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANED 114 I L +W+ G+ + + + ++VY IT+ SFE S+ + ED Sbjct: 88 TIILLDMWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTED 145 Query: 115 VERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 + +L+GNK D+ R V +G A +F ETSA N+++ F + + + Sbjct: 146 IPIILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRR 205 Query: 175 PVKEPN 180 KE N Sbjct: 206 DSKEKN 211 >1RYH-A nrPDB Length = 203 Score = 190 bits (484), Expect = 3e-49, Method: Composition-based stats. Identities = 49/200 (24%), Positives = 87/200 (43%), Gaps = 35/200 (17%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K +++GD VGKTC+L ++ +AF +I T+ ++ V + GK + L +WDTAGQE Sbjct: 6 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPVNLGLWDTAGQE 64 Query: 70 RFHTITTSYYRG-------------------AMGIMLVYDITNGKSFENIS-KWLRNIDE 109 + + Y A ++ + + + SFEN+ KW + Sbjct: 65 DYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEVRH 124 Query: 110 HANEDVERMLLGNKCDMDDKR------------VVPKGKGEQIAREHG-IRFFETSAKAN 156 H + +L+G K D+ D + + +G +A+E G +++ E SA Sbjct: 125 HC-PNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQ 183 Query: 157 INIEKAFLTLAEDILRKTPV 176 ++ F +L PV Sbjct: 184 RGLKTVFDEAIRAVLCPPPV 203 >2J1L-A nrPDB Length = 214 Score = 190 bits (484), Expect = 3e-49, Method: Composition-based stats. Identities = 52/175 (29%), Positives = 96/175 (54%), Gaps = 16/175 (9%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 K++L+GD G GKT +L F+D AF ++ T+ + + ++++GK + L IWDTAGQ+ Sbjct: 36 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVN-LQVKGKPVHLHIWDTAGQDD 94 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDMDDK 129 + + +Y A ++L +D+T+ SF+NI ++W ++ H + V +++G K D+ Sbjct: 95 YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN-HFCKKVPIIVVGCKTDLRKD 153 Query: 130 R------------VVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDIL 171 + V +G+++AR G + + E SA+ + N+ F AE L Sbjct: 154 KSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 208 >2FV8-A nrPDB Length = 207 Score = 190 bits (483), Expect = 3e-49, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 16/178 (8%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL+++GD GKTC+L FS D F ++ T+ ++ + +E+ GK+++L +WDTAGQE Sbjct: 27 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 85 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMD-- 127 + + Y I++ + + + S ENI KW+ + H +V +L+ NK D+ Sbjct: 86 YDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVK-HFCPNVPIILVANKKDLRSD 144 Query: 128 ----------DKRVVPKGKGEQIAREH-GIRFFETSAKANINIEKAFLTLAEDILRKT 174 + V G +A + E SAK + + F T L+K Sbjct: 145 EHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKR 202 >3WYF-A nrPDB Length = 219 Score = 189 bits (481), Expect = 6e-49, Method: Composition-based stats. Identities = 54/161 (33%), Positives = 93/161 (57%), Gaps = 3/161 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+L+GD G GKT + R F +I+TIG++ + +IK +WDTAG E Sbjct: 13 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGLE 72 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 +F + YY A ++++D+T+ +++N+ W R++ E++ +L GNK D+ ++ Sbjct: 73 KFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVC-ENIPIVLCGNKVDVKER 131 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 +V K K R+ +++++ SAK+N N EK FL LA + Sbjct: 132 KV--KAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 170 >5XOJ-A nrPDB Length = 182 Score = 188 bits (479), Expect = 1e-48, Method: Composition-based stats. Identities = 54/161 (33%), Positives = 93/161 (57%), Gaps = 3/161 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 FKL+L+GD G GKT + R F +I+TIG++ + +IK +WDTAG E Sbjct: 13 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGLE 72 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 +F + YY A ++++D+T+ +++N+ W R++ E++ +L GNK D+ ++ Sbjct: 73 KFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVC-ENIPIVLCGNKVDVKER 131 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 +V K K R+ +++++ SAK+N N EK FL LA + Sbjct: 132 KV--KAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 170 >2ERY-A nrPDB Length = 172 Score = 188 bits (477), Expect = 2e-48, Method: Composition-based stats. Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 2/156 (1%) Query: 22 KTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRG 81 K+ + +F F T + TI + + V + + +L I DTAGQE F + Y R Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCV-IDDRAARLDILDTAGQEEFGAMREQYMRT 76 Query: 82 AMGIMLVYDITNGKSFENISKWLRNIDEHANED-VERMLLGNKCDMDDKRVVPKGKGEQI 140 G +LV+ +T+ SFE I K+ R I + D +L+GNK D+D +R V + +G+Q+ Sbjct: 77 GEGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQL 136 Query: 141 AREHGIRFFETSAKANINIEKAFLTLAEDILRKTPV 176 AR+ + + E SAK +N+++AF L I + Sbjct: 137 ARQLKVTYMEASAKIRMNVDQAFHELVRVIRKFQEQ 172 >4FMC-F nrPDB Length = 117 Score = 187 bits (476), Expect = 2e-48, Method: Composition-based stats. Identities = 76/115 (66%), Positives = 101/115 (87%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERF 71 LLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+EL GK IKLQIWDTAGQERF Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60 Query: 72 HTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDM 126 TIT+SYYRGA GI++VYD+T+ +SF N+ +WL+ ID +A+E+V ++L+GNKCD+ Sbjct: 61 RTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 115 >4WA7-A nrPDB Length = 170 Score = 187 bits (475), Expect = 3e-48, Method: Composition-based stats. Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 3/156 (1%) Query: 22 KTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRG 81 K+ + + + F + TI ++ K V + G+ L I DTAG E + + Y R Sbjct: 17 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGLEEYSAMRDQYMRT 75 Query: 82 AMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDDKRVVPKGKGEQI 140 G + V+ I N KSFE+I + I + EDV +L+GNKCD+ R V + + + Sbjct: 76 GEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLP-SRTVDTKQAQDL 134 Query: 141 AREHGIRFFETSAKANINIEKAFLTLAEDILRKTPV 176 AR +GI F ETSAK ++ AF TL +I + Sbjct: 135 ARSYGIPFIETSAKTRQGVDDAFYTLVREIRKHKEK 170 >3CON-A nrPDB Length = 190 Score = 187 bits (475), Expect = 3e-48, Method: Composition-based stats. Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 3/157 (1%) Query: 22 KTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRG 81 K+ + + + F + TI ++ K V + G+ L I DTAGQE + + Y R Sbjct: 34 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 92 Query: 82 AMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDDKRVVPKGKGEQI 140 G + V+ I N KSF +I+ + I + +DV +L+GNKCD+ R V + ++ Sbjct: 93 GEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPT-RTVDTKQAHEL 151 Query: 141 AREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK 177 A+ +GI F ETSAK +E AF TL +I + K Sbjct: 152 AKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKK 188 >5WDQ-A nrPDB Length = 170 Score = 186 bits (473), Expect = 6e-48, Method: Composition-based stats. Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 3/152 (1%) Query: 22 KTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRG 81 K+ + + + F + TI ++ K V + G+ L I DTAGQE + + Y R Sbjct: 20 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 78 Query: 82 AMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDDKRVVPKGKGEQI 140 G + V+ I N KSFE+I ++ I + +DV +L+GNKCD R V + + + Sbjct: 79 GEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCD-AAARTVESRQAQDL 137 Query: 141 AREHGIRFFETSAKANINIEKAFLTLAEDILR 172 AR +GI + ETSAK +E AF TL +I + Sbjct: 138 ARSYGIPYIETSAKTRQGVEDAFYTLVREIRQ 169 >2CJW-A nrPDB Length = 192 Score = 186 bits (472), Expect = 8e-48, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 85/186 (45%), Gaps = 9/186 (4%) Query: 9 LFKLLLIGDSGVGKTCVLFRF--SDDAFNTTFISTIGIDFKIKTVELQGKK---IKLQIW 63 ++++LIG+ GVGK+ + F D+ ++ +G D +T+ + G+ I L +W Sbjct: 6 YYRVVLIGEQGVGKSTLANIFAGVHDSMDSD-CEVLGEDTYERTLMVDGESATIILLDMW 64 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANEDVERMLLGN 122 + G+ + + + ++VY IT+ SFE S+ + ED+ +L+GN Sbjct: 65 ENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGN 122 Query: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182 K D+ R V +G A +F ETSA N+++ F + + + KE N Sbjct: 123 KSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRRDSKEKNER 182 Query: 183 NVDISS 188 + Sbjct: 183 RLAYQK 188 >3CBQ-A nrPDB Length = 195 Score = 185 bits (470), Expect = 1e-47, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 2/170 (1%) Query: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 D +FK++L+G+SGVGK+ + F ++ D + + + +++ L ++D Sbjct: 21 DGIFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVVYDIW 80 Query: 67 GQ-ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANEDVERMLLGNKC 124 Q + + + ++V+ +T+ +SF + + L + + D+ +L+GNK Sbjct: 81 EQGDAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGNKS 140 Query: 125 DMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 D+ R V +G +A + ETSA + N + F I + Sbjct: 141 DLARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELFEGAVRQIRLRR 190 >5VCU-A nrPDB Length = 208 Score = 185 bits (469), Expect = 2e-47, Method: Composition-based stats. Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 16/189 (8%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K +++GD VGKT +L +S F ++ T+ ++ K + + + ++DTAGQE Sbjct: 12 IKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYN-KNIPYGDGIVSIALYDTAGQE 70 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDMDD 128 + + Y ++ + + N S EN SKW + H N D +L+G K D+ Sbjct: 71 DYDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELK-HYNPDTPIVLVGTKLDLKK 129 Query: 129 KRV------------VPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRKTP 175 V +G+++ + + E SAK N+ +AF + +++ Sbjct: 130 DEEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAMKQRL 189 Query: 176 VKEPNSENV 184 P + N Sbjct: 190 KDAPPTANA 198 >6FF8-A nrPDB Length = 181 Score = 185 bits (469), Expect = 2e-47, Method: Composition-based stats. Identities = 68/176 (38%), Positives = 106/176 (60%), Gaps = 6/176 (3%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK-IKL 60 + +T + LFK+L+IG+ GVGKT ++ R+ F+ + +TIG+DF +K + + ++L Sbjct: 1 SMETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 60 Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVE 116 Q+WD AG ERF +T YY+ A+G +V+DI+ +FE + KW ++D + + Sbjct: 61 QLWDIAGLERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 120 Query: 117 RMLLGNKCDMDDKRVVPKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171 +LL NKCD + + +Q +EHG +FETSAK NINIE+A L E IL Sbjct: 121 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 176 >5UHV-A nrPDB Length = 166 Score = 184 bits (468), Expect = 2e-47, Method: Composition-based stats. Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 3/152 (1%) Query: 22 KTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRG 81 K+ + + + F + TI ++ K V + G+ L I DTAGQE + + Y R Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRT 74 Query: 82 AMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDDKRVVPKGKGEQI 140 G + V+ I N KSF +I+ + I + +DV +L+GNKCD+ R V + ++ Sbjct: 75 GEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDLPT-RTVDTKQAHEL 133 Query: 141 AREHGIRFFETSAKANINIEKAFLTLAEDILR 172 A+ +GI F ETSAK +E AF TL +I + Sbjct: 134 AKSYGIPFIETSAKTRQGVEDAFYTLVREIRQ 165 >4DJT-A nrPDB Length = 218 Score = 184 bits (467), Expect = 2e-47, Method: Composition-based stats. Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 8/195 (4%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIG-IDFKIKTVELQGKKIKL 60 + + +L +K+ LIGD GVGKT + R D F + +T+G ++ + ++ QG IK Sbjct: 4 SMERRELTYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKF 63 Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120 +WDTAGQE+ + YY GA G +L +D+T+ + +N+++W++ + ++ Sbjct: 64 NVWDTAGQEKKAVLKDVYYIGASGAILFFDVTSRITCQNLARWVKEFQAVVGNEAPIVVC 123 Query: 121 GNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPV---- 176 NK D+ +++ + K ++ + +FE SAK N FL LA + + Sbjct: 124 ANKIDIKNRQKISKKLVMEVLKGKNYEYFEISAKTAHNFGLPFLHLARIFTGRPDLIFVS 183 Query: 177 ---KEPNSENVDISS 188 EP N D S Sbjct: 184 NVNLEPTEVNYDYHS 198 >3VHL-B nrPDB Length = 195 Score = 184 bits (467), Expect = 3e-47, Method: Composition-based stats. Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 19/196 (9%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61 + + K +++GD VGK C+L ++ + F + ++ T+ ++ + TV + G+ L Sbjct: 3 SGSSGMQTIKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLG 61 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLL 120 ++DTAGQE + + Y ++ + + + SFEN+ KW+ I H +L+ Sbjct: 62 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLV 120 Query: 121 GNKCDMDD------------KRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLA 167 G + D+ D ++ + E++AR+ +++ E SA ++ F Sbjct: 121 GTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFD--- 177 Query: 168 EDILRKTPVKEPNSEN 183 E IL EP Sbjct: 178 EAILAALEPPEPKKSR 193 >2ATV-A nrPDB Length = 196 Score = 184 bits (467), Expect = 3e-47, Method: Composition-based stats. Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 4/169 (2%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL + G +GVGK+ ++ RF F + T+ ++ + + + + ++I DTAGQE Sbjct: 30 KLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQA-TIDDEVVSMEILDTAGQED 88 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANEDVERMLLGNKCDMDDK 129 + R G +LVYDIT+ SFE + +DE ++V +L+GNK D+D Sbjct: 89 -TIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDHS 147 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANI-NIEKAFLTLAEDILRKTPVK 177 R V +GE++A E F+E SA NI + F L ++ R+ V+ Sbjct: 148 RQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVRRRRMVQ 196 >3A58-B nrPDB Length = 188 Score = 183 bits (464), Expect = 6e-47, Method: Composition-based stats. Identities = 46/176 (26%), Positives = 87/176 (49%), Gaps = 16/176 (9%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL+++GD GKTC+L S F ++ T+ ++ + VE+ G++++L +WDTAGQE Sbjct: 12 KLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQED 70 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMDD- 128 + + Y + +++ + I S EN+ KW+ + H + V +L+G K D+ + Sbjct: 71 YDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVL-HFCQGVPIILVGCKVDLRND 129 Query: 129 -----------KRVVPKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDILR 172 ++ V +G+ +A + G ++E SAK + + F L Sbjct: 130 PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 >3PIR-A nrPDB Length = 183 Score = 181 bits (460), Expect = 2e-46, Method: Composition-based stats. Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 3/154 (1%) Query: 22 KTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRG 81 K+ + +F F + TI + +K E+ + L + DTAGQE F + Y R Sbjct: 31 KSALTIQFFQKIFVPEYDPTIEDSY-LKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRT 89 Query: 82 AMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDDKRVVPKGKGEQI 140 G ++VY +T+ SFE++ ++ + I + E +L+ NK D+ R V + +G+++ Sbjct: 90 GDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLRKVTRDQGKEM 149 Query: 141 AREHGIRFFETSAKA-NINIEKAFLTLAEDILRK 173 A ++ I + ETSAK +N++K F L I ++ Sbjct: 150 ATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQ 183 >2Q3H-A nrPDB Length = 201 Score = 181 bits (460), Expect = 2e-46, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 16/182 (8%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 K +L+GD VGKT ++ ++ + + T +I T +F V + G+ ++LQ+ DTAGQ+ Sbjct: 22 KCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFS-AVVSVDGRPVRLQLCDTAGQDE 80 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMDD- 128 F + Y +L + + + SF+N+S KW+ I H +L+G + D+ + Sbjct: 81 FDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHC-PKAPIILVGTQSDLRED 139 Query: 129 -----------KRVVPKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDILRKTPV 176 ++ VP+ + +A E + E SA N+++ F ++ + Sbjct: 140 VKVLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFDAAIVAGIQYSDT 199 Query: 177 KE 178 ++ Sbjct: 200 QQ 201 >5ZVP-A nrPDB Length = 181 Score = 181 bits (460), Expect = 2e-46, Method: Composition-based stats. Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 16/175 (9%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KL+++GD GKTC+L S F ++ T+ ++ + VE+ GK ++L +WDTAGQE Sbjct: 7 KLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENY-VADVEVDGKHVELALWDTAGQED 65 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMDD- 128 + + Y + I++ + I + S +N+ KW+ + H + + +L+G K D+ Sbjct: 66 YDRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVL-HFCQGLPIILVGCKKDLRHD 124 Query: 129 -----------KRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDIL 171 ++ V +GE++ ++ G ++ E SA+ N + + F L Sbjct: 125 PKTIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAAL 179 >3T5G-A nrPDB Length = 181 Score = 179 bits (455), Expect = 6e-46, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 17/190 (8%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 K+ ++G VGK+ + +F + F ++ TI F K + + G++ LQ+ DTAGQ+ Sbjct: 8 KIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKLITVNGQEYHLQLVDTAGQDE 66 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWL-RNIDEHANEDVERMLLGNKCDMDDK 129 + +Y G +LVY +T+ KSFE I + +D + ML+GNK D+ + Sbjct: 67 YSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKVQIPIMLVGNKKDLHME 126 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISSG 189 RV+ +G+ +A F E+SAK N F + + +E +D Sbjct: 127 RVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILE-----------AEKMD---- 171 Query: 190 GGVTGWKSKC 199 G + KS C Sbjct: 172 GACSQGKSSC 181 >3Q85-A nrPDB Length = 169 Score = 178 bits (453), Expect = 1e-45, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 75/168 (44%), Gaps = 2/168 (1%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 +FK++L+G+SGVGK+ + F + D + + + +++ L ++D Q Sbjct: 2 VFKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQ 61 Query: 69 -ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANEDVERMLLGNKCDM 126 + + + ++V+ +T+ +SF + + L + + D+ +L+GNK D+ Sbjct: 62 GDAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGNKSDL 121 Query: 127 DDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 R V +G +A + ETSA + N + F I + Sbjct: 122 ARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELFEGAVRQIRLRR 169 >3OES-A nrPDB Length = 201 Score = 176 bits (446), Expect = 7e-45, Method: Composition-based stats. Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 2/163 (1%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 K++++G VGKT + +F + F+ + T+ + K V L + L + DTAGQ+ Sbjct: 26 KVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYS-KIVTLGKDEFHLHLVDTAGQDE 84 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANEDVERMLLGNKCDMDDK 129 + + S+ G G +LVY +T+ SF+ I + + E H V +L+GNK D+ + Sbjct: 85 YSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVLVGNKADLSPE 144 Query: 130 RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 R V +G+++A G F E+SA+ N + F + ++I R Sbjct: 145 REVQAVEGKKLAESWGATFMESSARENQLTQGIFTKVIQEIAR 187 >3Q72-A nrPDB Length = 166 Score = 175 bits (443), Expect = 2e-44, Method: Composition-based stats. Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 3/167 (1%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 ++K+LL+G GVGK+ + R + G + +++ + G++ L ++D Q Sbjct: 2 VYKVLLLGAPGVGKSALA-RIFGGVEDGPEAEAAGHTY-DRSIVVDGEEASLMVYDIWEQ 59 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANEDVERMLLGNKCDMD 127 + + ++VY +T+ SFE S+ + +DV +L+GNK D+ Sbjct: 60 DGGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLV 119 Query: 128 DKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 R V +G A +F ETSA + N++ F + I + Sbjct: 120 RSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQIRLRR 166 >2NZJ-A nrPDB Length = 175 Score = 174 bits (442), Expect = 2e-44, Method: Composition-based stats. Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 4/159 (2%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 L++++L+GD GVGKT + F+ +G D +T+ + G+ L + DT Sbjct: 4 LYRVVLLGDPGVGKTSLASLFAGKQ-ERDLHEQLGEDVYERTLTVDGEDTTLVVVDTWEA 62 Query: 69 ERFHTITTS--YYRGAMGIMLVYDITNGKSFENISKWLRNIDE-HANEDVERMLLGNKCD 125 E+ + +G ++VY I + SFE+ S+ + H + V +L+GNK D Sbjct: 63 EKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNKAD 122 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFL 164 + R V +G A +F ETSA N+ + F Sbjct: 123 LARCREVSVEEGRACAVVFDCKFIETSATLQHNVAELFE 161 >3E5H-A nrPDB Length = 178 Score = 173 bits (439), Expect = 5e-44, Method: Composition-based stats. Identities = 55/166 (33%), Positives = 87/166 (52%), Gaps = 4/166 (2%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGK-KIKLQIWDTAGQ 68 K++++GD GKT + F+ + F + TIG+DF ++ + L G + LQIWD GQ Sbjct: 7 LKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQ 66 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANED---VERMLLGNKCD 125 + Y GA G++LVYDITN +SFEN+ W + + + E L+GNK D Sbjct: 67 TIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPLVALVGNKID 126 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL 171 ++ R + K + +E+G SAK ++ F +A +IL Sbjct: 127 LEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEIL 172 >4MIT-A nrPDB Length = 186 Score = 171 bits (433), Expect = 2e-43, Method: Composition-based stats. Identities = 47/177 (26%), Positives = 89/177 (50%), Gaps = 16/177 (9%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 KL+++GD VGKTC+L +S F +I T+ ++ + ++ ++I+L +WDTAG E Sbjct: 11 IKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNY-VVSLTAGTRQIQLALWDTAGLE 69 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDMDD 128 + + Y A ++ + +T+ S++N+ +KW + H V +L+G K D + Sbjct: 70 EYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVI-HFAPKVPIILVGTKLDTRN 128 Query: 129 KR------------VVPKGKGEQIA-REHGIRFFETSAKANINIEKAFLTLAEDILR 172 V+ KGE++ R +++ E SAK + N++ F + +L Sbjct: 129 DPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAVKTVLM 185 >3RAP-R nrPDB Length = 167 Score = 169 bits (430), Expect = 5e-43, Method: Composition-based stats. Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 2/150 (1%) Query: 22 KTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRG 81 K+ + +F F + TI DF K +E+ L+I DTAG E+F ++ Y + Sbjct: 16 KSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKN 74 Query: 82 AMGIMLVYDITNGKSFENISKWLRNI-DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQI 140 G +LVY + N +SF++I I E V +L+GNK D++ +R V +G + Sbjct: 75 GQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSSEGRAL 134 Query: 141 AREHGIRFFETSAKANINIEKAFLTLAEDI 170 A E G F ETSAK+ +++ F + + Sbjct: 135 AEEWGCPFMETSAKSKTMVDELFAEIVRQM 164 >3REG-A nrPDB Length = 194 Score = 169 bits (428), Expect = 8e-43, Method: Composition-based stats. Identities = 50/179 (27%), Positives = 90/179 (50%), Gaps = 6/179 (3%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 + K++++GD VGKTC+L FS T ++ T+ +F ++ + ++ L +W Sbjct: 18 ENGKKALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSH-VMKYKNEEFILHLW 76 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGN 122 DTAGQE + + Y + ++L + + N SF+NIS KW I H + + +L+G Sbjct: 77 DTAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIK-HYIDTAKTVLVGL 135 Query: 123 KCDMDDK--RVVPKGKGEQIAREHGI-RFFETSAKANINIEKAFLTLAEDILRKTPVKE 178 K D+ V K +G+ + ++ G + E S+ A I + + F + I PV + Sbjct: 136 KVDLRKDGSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCIFSNKPVPK 194 >2GF0-A nrPDB Length = 199 Score = 169 bits (428), Expect = 8e-43, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 4/177 (2%) Query: 22 KTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRG 81 K+ ++ RF F T+I TI ++ + + LQI DT G +F + Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYR-QVISCDKSVCTLQITDTTGSHQFPAMQRLSISK 79 Query: 82 AMGIMLVYDITNGKSFENISKWLRNIDEHAN--EDVERMLLGNKCDMDDKRVVPKGKGEQ 139 +LV+ +T+ +S E + + I + ED+ ML+GNKCD + +R V + + Sbjct: 80 GHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCD-ETQREVDTREAQA 138 Query: 140 IAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISSGGGVTGWK 196 +A+E F ETSAK N N+++ F L R+ + + K Sbjct: 139 VAQEWKCAFMETSAKMNYNVKELFQELLTLETRRNMSLNIDGKRSGKQKRTDRVKGK 195 >3CLV-A nrPDB Length = 208 Score = 169 bits (428), Expect = 9e-43, Method: Composition-based stats. Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 40/202 (19%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGK------------- 56 +K +L+G+S VGK+ ++ R + D F+ +TIG F V L Sbjct: 8 YKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNEKNNN 67 Query: 57 ------------------------KIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDIT 92 IK IWDTAGQER+ +I YYRGA ++V+DI+ Sbjct: 68 INSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIVVFDIS 127 Query: 93 NGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETS 152 N + + W+ + + + +L+ NK D +K V + ++ A+++ + F +TS Sbjct: 128 NSNTLDRAKTWVNQLKI--SSNYIIILVANKID-KNKFQVDILEVQKYAQDNNLLFIQTS 184 Query: 153 AKANINIEKAFLTLAEDILRKT 174 AK NI+ F LAE+I + Sbjct: 185 AKTGTNIKNIFYMLAEEIYKNI 206 >5XC3-A nrPDB Length = 176 Score = 167 bits (424), Expect = 3e-42, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 94/171 (54%), Gaps = 2/171 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVEL-QGKKIKLQIWDTAGQ 68 +K++LIG SGVGK+ ++ +F + + TIG F K V GK +KL IWDTAGQ Sbjct: 6 YKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQ 65 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDD 128 ERF +IT YY ++G ++V+D+T+ +SF+++ W+ ++ + + +++ NK D+D Sbjct: 66 ERFRSITKMYYTNSLGCLVVFDVTDRESFDDVYYWINDLRINCHTTYYILVVANKIDIDK 125 Query: 129 KR-VVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178 V + + ++ R++ + S+ + + F + + + + Sbjct: 126 NNWRVSENEIKKFCRDNDCDYVFASSFESDTVNNLFGKMIDKMSEIKINPD 176 >1GWN-A nrPDB Length = 205 Score = 160 bits (405), Expect = 4e-40, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 86/173 (49%), Gaps = 17/173 (9%) Query: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 ++ K++++GDS GKT +L F+ D F ++ T+ ++ + E+ ++I+L +WDT+ Sbjct: 26 NVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY-TASFEIDTQRIELSLWDTS 84 Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCD 125 G + + Y + +++ +DI+ ++ +++ KW I E + + +L+G K D Sbjct: 85 GSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFC-PNTKMLLVGCKSD 143 Query: 126 MD----------DKRV--VPKGKGEQIAREHGIR-FFETSAKANIN-IEKAFL 164 + + R V +G +A++ G + E SA + N + F Sbjct: 144 LRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFH 196 >1M7B-A nrPDB Length = 184 Score = 158 bits (401), Expect = 1e-39, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 85/173 (49%), Gaps = 17/173 (9%) Query: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 ++ K++++GDS GKT +L F+ D F ++ T+ ++ + E+ ++I+L +WDT+ Sbjct: 5 NVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY-TASFEIDTQRIELSLWDTS 63 Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCD 125 G + + Y + +++ +DI+ ++ +++ KW I E + + +L+G K D Sbjct: 64 GSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFC-PNTKMLLVGCKSD 122 Query: 126 MD------------DKRVVPKGKGEQIAREHGIR-FFETSAKANIN-IEKAFL 164 + + V +G +A++ G + E SA + N + F Sbjct: 123 LRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFH 175 >5C1S-A nrPDB Length = 391 Score = 146 bits (370), Expect = 4e-36, Method: Composition-based stats. Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 9/164 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +LL++G SGVGKT + D F + S G + + K V++ I++ I D AGQ+ Sbjct: 63 IRLLVVGSSGVGKTTLC-----DCFFESHQSQ-GEETREKHVQIDNDFIRISISDIAGQQ 116 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMDD 128 F+ Y G I+++YDIT KSF ++ WL +I + N D + +++GNK D + Sbjct: 117 SFYACDNPY-DGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIGNKKDQEI 175 Query: 129 KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 R++ + + EQ A++ +F+E S K + + F ++ D L+ Sbjct: 176 DRIITRKEAEQFAQDRLCQFYEISTKD-DSCQLLFDCISRDFLQ 218 Score = 93.7 bits (232), Expect = 4e-20, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 10/168 (5%) Query: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFK---IKTVELQGKKIKLQIW 63 D+ ++L++GD VGKT + +F+ T G DF E++ K ++ + Sbjct: 220 DIKIRMLMVGDQNVGKTTFIRKFAL------QDPT-GHDFMNAITTRFEMEKIKYEIIMI 272 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 D + + R I++VYDITN +SF+NI + + + DV +++G K Sbjct: 273 DWGFYNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAGVIVGYK 332 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL 171 D++ +R + G +A G ++ E S+K + LA I Sbjct: 333 TDLEAQRKITMGDALTLADWLGYKYVEMSSKDTEDHSSIIKALAHSIR 380 >5EE5-B nrPDB Length = 171 Score = 141 bits (356), Expect = 2e-34, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 9/169 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G G GKT +L+R TT I TIG F ++TV K +K Q+WD G Sbjct: 8 MRILILGLDGAGKTTILYRLQVGEVVTT-IPTIG--FNVETVTY--KNLKFQVWDLGGLT 62 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFE-NISKWLRNIDEHANEDVERMLLGNKCDMDD 128 YY ++ V D + + S+ + ++E ++ NK DM+ Sbjct: 63 SIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQ 122 Query: 129 KR---VVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 + G ++ + F+TSA +++A L E + + Sbjct: 123 AMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLKSRQ 171 >3C5C-A nrPDB Length = 187 Score = 140 bits (353), Expect = 4e-34, Method: Composition-based stats. Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 6/165 (3%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERF 71 L ++G G GK+ + +F F + + + + + + + + L++ DTA + Sbjct: 24 LAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEE-TVDHQPVHLRVMDTADLDTP 82 Query: 72 HTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANE---DVERMLLGNKCDMDD 128 Y A ++VY + + +SF++ S +L + HA E + +LLGNK DM Sbjct: 83 RNC-ERYLNWAHAFLVVYSVDSRQSFDSSSSYLELLALHAKETQRSIPALLLGNKLDMAQ 141 Query: 129 KRVVPKGKGEQIAREHGIRFFETSA-KANINIEKAFLTLAEDILR 172 R V K +G +A G FFE SA +++ F + R Sbjct: 142 YRQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVREARR 186 >5HZH-A nrPDB Length = 332 Score = 137 bits (346), Expect = 3e-33, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 61/145 (42%), Gaps = 15/145 (10%) Query: 44 IDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-K 102 ID K + GK + L +WDTAG E + + Y ++ + + + SFEN+ K Sbjct: 189 IDEAAKELGSGGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAK 248 Query: 103 WLRNIDEHANEDVERMLLGNKCDMDDKR------------VVPKGKGEQIAREHG-IRFF 149 W + H + +L+G K D+ D + + +G +A+E G +++ Sbjct: 249 WYPEVRHHC-PNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYL 307 Query: 150 ETSAKANINIEKAFLTLAEDILRKT 174 E SA ++ F +L Sbjct: 308 ECSALTQRGLKTVFDEAIRAVLCPP 332 Score = 67.1 bits (163), Expect = 4e-12, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQG 55 K +++GD VGKTC+L ++ +AF +I T+ ++ V + G Sbjct: 7 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDG 51 >3LRP-A nrPDB Length = 181 Score = 137 bits (345), Expect = 4e-33, Method: Composition-based stats. Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 9/160 (5%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 ++L++G GKT +L++ TT I TIG F ++TVE + I +WD GQ++ Sbjct: 19 RILMVGLDAAGKTTILYKVKLGEVVTT-IPTIG--FNVETVEF--RNISFTVWDVGGQDK 73 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWL-RNIDEHANEDVERMLLGNKCDMDDK 129 + YY G++ V D + + ++ + L R I+E +D ++ NK D+ + Sbjct: 74 IRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDLPNA 133 Query: 130 R---VVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTL 166 V + RE T A + + F L Sbjct: 134 MSAAEVTEKLHLNTIRERNWFIQSTCATRGDGLYEGFDWL 173 >4YLG-A nrPDB Length = 173 Score = 136 bits (343), Expect = 6e-33, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 11/166 (6%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I TIG F ++TVE K I +WD GQ+ Sbjct: 14 MRILMVGLDAAGKTSILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDVGGQD 68 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSF-ENISKWLRNIDEHANEDVERMLLGNKCDMDD 128 + + YY+ I+ V D + E + ++ ++E + ++ NK D+ Sbjct: 69 KIRPLWRHYYQNTQAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAILLVFANKHDLPQ 128 Query: 129 KR---VVPKGKGEQIAREHGIRFFETS-AKANINIEKAFLTLAEDI 170 V + G Q + + +TS A + + LA+++ Sbjct: 129 AMSISEVTEKLGLQTIKNRKW-YCQTSCATNGDGLYEGLDWLADNL 173 >2YC4-C nrPDB Length = 208 Score = 136 bits (343), Expect = 7e-33, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 85/182 (46%), Gaps = 9/182 (4%) Query: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDD--AFNTTFISTIGIDFKIKTVELQGKKIKLQI 62 T L K+ ++G++ VGK+ ++ F+ F + T G++ + V + + +++ Sbjct: 16 TATLRCKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVEL 75 Query: 63 --WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNID-EHANEDVER-- 117 DTAG + + + Y+ G +LV+D+++ +SFE+ W + + + Sbjct: 76 FLLDTAGSDLYKEQISQYWNGVYYAILVFDVSSMESFESCKAWFELLKSARPDRERPLRA 135 Query: 118 MLLGNKCDMDDKR-VVPKGKGEQIAREHGIRFFETSA-KANINIEKAFLTLAEDILRKTP 175 +L+ NK D+ +R V + A + + FF+ SA + + FL++A R Sbjct: 136 VLVANKTDLPPQRHQVRLDMAQDWATTNTLDFFDVSANPPGKDADAPFLSIATTFYRNYE 195 Query: 176 VK 177 K Sbjct: 196 DK 197 >6FAE-B nrPDB Length = 213 Score = 136 bits (343), Expect = 7e-33, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 9/169 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I TIG F ++TVE K I +WD GQ+ Sbjct: 50 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDVGGQD 104 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWL-RNIDEHANEDVERMLLGNKCDMDD 128 + + Y++ G++ V D + + + L R + E D ++ NK D+ + Sbjct: 105 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 164 Query: 129 KR---VVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 + G R T A + + + L+ + + Sbjct: 165 AMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 213 >3O47-A nrPDB Length = 329 Score = 136 bits (343), Expect = 7e-33, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 9/169 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I TIG F ++TVE K I +WD GQ+ Sbjct: 166 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDVGGQD 220 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWL-RNIDEHANEDVERMLLGNKCDMDD 128 + + Y++ G++ V D + + + L R + E D ++ NK D+ + Sbjct: 221 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 280 Query: 129 KR---VVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 + G R T A + + + L+ + + Sbjct: 281 AMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 329 >2REX-B nrPDB Length = 197 Score = 136 bits (342), Expect = 8e-33, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 88/190 (46%), Gaps = 17/190 (8%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61 A + KL+L+GD GKT +L + D + T++ T+ ++ +E + ++++L Sbjct: 3 APQPVVARCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENY-TACLETEEQRVELS 61 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFEN-ISKWLRNIDEHANEDVERMLL 120 +WDT+G + + Y + ++L +DI+ ++ ++ + KW I ++ +L+ Sbjct: 62 LWDTSGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYC-PSTRVLLI 120 Query: 121 GNKCDMD----------DKRV--VPKGKGEQIAREHGIR-FFETSAKANI-NIEKAFLTL 166 G K D+ ++ + +G IA++ G + E SA + +I F T Sbjct: 121 GCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTA 180 Query: 167 AEDILRKTPV 176 + L K Sbjct: 181 SMLCLNKPSP 190 >1Z6X-A nrPDB Length = 180 Score = 134 bits (339), Expect = 2e-32, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 9/168 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I TIG F ++TVE K I +WD GQ+ Sbjct: 18 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNICFTVWDVGGQD 72 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWL-RNIDEHANEDVERMLLGNKCDMDD 128 R + Y++ G++ V D + + + ++ L + + D +L NK D+ + Sbjct: 73 RIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLPN 132 Query: 129 KRVVPKG---KGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 + + G Q R T A + + L+ ++ ++ Sbjct: 133 AMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR 180 >3AQ4-A nrPDB Length = 184 Score = 134 bits (338), Expect = 2e-32, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 9/168 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I TIG F ++TVE K I +WD GQ+ Sbjct: 21 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDVGGQD 75 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKS-FENISKWLRNIDEHANEDVERMLLGNKCDMDD 128 + + Y++ G++ V D + E + R ++E D ++ NK D+ + Sbjct: 76 KIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPN 135 Query: 129 KR---VVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 + G R+ T A + + + L+ +I K Sbjct: 136 AMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 183 >2B6H-A nrPDB Length = 192 Score = 134 bits (338), Expect = 2e-32, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 9/168 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I TIG F ++TVE K I +WD GQ+ Sbjct: 30 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNICFTVWDVGGQD 84 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSF-ENISKWLRNIDEHANEDVERMLLGNKCDMDD 128 + + Y++ G++ V D + + E+ + + + E D ++ NK DM + Sbjct: 85 KIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPN 144 Query: 129 KRVVPK---GKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 V + G Q R T A + L+ ++ ++ Sbjct: 145 AMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR 192 >6DFF-C nrPDB Length = 193 Score = 133 bits (336), Expect = 4e-32, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 69/169 (40%), Gaps = 9/169 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I TIG F ++TVE K I +WD G + Sbjct: 30 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDVGGLD 84 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWL-RNIDEHANEDVERMLLGNKCDMDD 128 + + Y++ G++ V D + + + L R + E D ++ NK D+ + Sbjct: 85 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 144 Query: 129 KR---VVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 + G R T A + + + L+ + + Sbjct: 145 AMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 193 >1J2J-A nrPDB Length = 166 Score = 133 bits (336), Expect = 4e-32, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 69/169 (40%), Gaps = 9/169 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I TIG F ++TVE K I +WD G + Sbjct: 3 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDVGGLD 57 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWL-RNIDEHANEDVERMLLGNKCDMDD 128 + + Y++ G++ V D + + + L R + E D ++ NK D+ + Sbjct: 58 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 117 Query: 129 KR---VVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 + G R T A + + + L+ + + Sbjct: 118 AMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQK 166 >5UF8-A nrPDB Length = 181 Score = 132 bits (332), Expect = 1e-31, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 9/170 (5%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 + ++L++G GKT +L++ TT I TIG F ++TVE K I +WD Sbjct: 14 GNKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY--KNISFTVWDV 68 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRN-IDEHANEDVERMLLGNKC 124 GQ++ + Y++ GI+ V D + + L+ ++E D ++ NK Sbjct: 69 GGQDKIRPLWRYYFQNTQGIIFVVDSNDRDRIAEAREELQQMLNEDELRDALLLVFANKQ 128 Query: 125 DMDDKR---VVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL 171 D+ + + + G R+ T A + + L+ ++ Sbjct: 129 DLPNAMNAAEITEKLGLHSIRQRPWYIQATCATTGDGLYEGLEWLSTNLK 178 >3LVQ-E nrPDB Length = 497 Score = 131 bits (329), Expect = 2e-31, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 11/162 (6%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G GKT +L++ TT I T+G F ++TV K +K +WD GQ+ Sbjct: 323 MRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY--KNVKFNVWDVGGQD 377 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRN-IDEHANEDVERMLLGNKCDMDD 128 + + YY G G++ V D + + + L I++ D ++ NK D+ D Sbjct: 378 KIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPD 437 Query: 129 KR---VVPKGKGEQIAREHGIRFFETS-AKANINIEKAFLTL 166 + + G R+ + + S A + + + L Sbjct: 438 AMKPHEIQEKLGLTRIRDRNW-YVQPSCATSGDGLYEGLTWL 478 >2A5F-A nrPDB Length = 175 Score = 130 bits (328), Expect = 4e-31, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 11/171 (6%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60 ++K + ++L++G GKT +L++ TT I T+G F ++TV K +K Sbjct: 5 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY--KNVKF 59 Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRN-IDEHANEDVERML 119 +WD GQ++ + YY G G++ V D + + + L I++ D ++ Sbjct: 60 NVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILI 119 Query: 120 LGNKCDMDDKR---VVPKGKGEQIAREHGIRFFETS-AKANINIEKAFLTL 166 NK D+ D + + G R+ + + S A + + + L Sbjct: 120 FANKQDLPDAMKPHEIQEKLGLTRIRDRNW-YVQPSCATSGDGLYEGLTWL 169 >5NZV-F nrPDB Length = 181 Score = 129 bits (326), Expect = 6e-31, Method: Composition-based stats. Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 9/173 (5%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 + ++L++G G GKT VL++ TT I TIG F ++TV+ K I +WD Sbjct: 14 GNKEMRILMVGLDGAGKTTVLYKLKLGEVITT-IPTIG--FNVETVQY--KNISFTVWDV 68 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHANEDVERMLLGNKC 124 GQ+R ++ YYR G++ V D + + R ++E + ++ NK Sbjct: 69 GGQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQ 128 Query: 125 DMDDKR---VVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 D+ + + + G R T A + + + L+ + T Sbjct: 129 DLPEAMSAAEITEKLGLHSIRNRPWFIQATCATSGEGLYEGLEWLSNSLKNST 181 >2AL7-A nrPDB Length = 186 Score = 129 bits (324), Expect = 9e-31, Method: Composition-based stats. Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 10/161 (6%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +L L+G GKT + + F+ I T+G + + ++ + ++IWD GQ Sbjct: 23 MELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMR----KVTKGNVTIKIWDIGGQP 78 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRN-IDEHANEDVERMLLGNKCD--- 125 RF ++ Y RG I+ + D + + E L N +D+ + + ++LGNK D Sbjct: 79 RFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPN 138 Query: 126 -MDDKRVVPKGKGEQIA-REHGIRFFETSAKANINIEKAFL 164 +D+K+++ K I RE K NI+I +L Sbjct: 139 ALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 179 >6BBQ-A nrPDB Length = 520 Score = 128 bits (323), Expect = 1e-30, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 11/171 (6%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60 ++K + ++L++G GKT +L++ TT I T+G F ++TV K +K Sbjct: 351 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY--KNVKF 405 Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRN-IDEHANEDVERML 119 +WD G ++ + YY G G++ V D + + + L I++ D ++ Sbjct: 406 NVWDVGGLDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILI 465 Query: 120 LGNKCDMDDKR---VVPKGKGEQIAREHGIRFFETS-AKANINIEKAFLTL 166 NK D+ D + + G R+ + + S A + + + L Sbjct: 466 FANKQDLPDAMKPHEIQEKLGLTRIRDRNW-YVQPSCATSGDGLYEGLTWL 515 >4ILE-A nrPDB Length = 184 Score = 128 bits (322), Expect = 2e-30, Method: Composition-based stats. Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 10/161 (6%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +L L+G GKT + + FN I T+G + + ++ + +++WD GQ Sbjct: 23 MELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMR----KITKGNVTIKLWDIGGQP 78 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRN-IDEHANEDVERMLLGNKCD--- 125 RF ++ Y RG I+ + D + + E L N +D+ + + ++LGNK D Sbjct: 79 RFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPG 138 Query: 126 -MDDKRVVPKGKGEQIA-REHGIRFFETSAKANINIEKAFL 164 +D+K ++ K I RE K NI+I +L Sbjct: 139 ALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWL 179 >1MOZ-A nrPDB Length = 183 Score = 126 bits (317), Expect = 7e-30, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 66/169 (39%), Gaps = 9/169 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 ++L++G G GKT +L+R TT TIG F ++T+ K +KL +WD GQ Sbjct: 19 LRILILGLDGAGKTTILYRLQIGEVVTT-KPTIG--FNVETLSY--KNLKLNVWDLGGQT 73 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLR-NIDEHANEDVERMLLGNKCDMD- 127 YY ++ V D T+ SK L + E +D ++ NK D Sbjct: 74 SIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPG 133 Query: 128 --DKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 V K ++ +SA I + L + I + Sbjct: 134 ALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVIKEEQ 182 >4ZI3-A nrPDB Length = 190 Score = 122 bits (308), Expect = 7e-29, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 9/179 (5%) Query: 3 KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQI 62 K D ++LL+G GKT +L + + + + T G F IK+V+ QG KL + Sbjct: 11 KSAPDQEVRILLLGLDNAGKTTLLKQLASEDI-SHITPTQG--FNIKSVQSQG--FKLNV 65 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANED-VERMLLG 121 WD GQ + SY+ ++ V D + K FE + L + E V ++ Sbjct: 66 WDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFA 125 Query: 122 NKCDMDDKRVVPK-GKGEQIA--REHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK 177 NK D+ + +G + R+ + SA ++ + +++ K ++ Sbjct: 126 NKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAKKKLE 184 >1YZG-A nrPDB Length = 179 Score = 118 bits (296), Expect = 2e-27, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 9/168 (5%) Query: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 + K++++G GKT +L++F + T TIG + + V K +WD Sbjct: 14 NQEHKVIIVGLDNAGKTTILYQFLMNEVVHT-SPTIGSNVEEIVV----KNTHFLMWDIG 68 Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCD 125 GQE + +YY I+LV D + + + L + H + ++ NK D Sbjct: 69 GQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQD 128 Query: 126 MDDKR---VVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 M + K ++H A + + + I Sbjct: 129 MKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176 >2H16-A nrPDB Length = 183 Score = 117 bits (293), Expect = 4e-27, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 6/126 (4%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K++++G GKT +L++FS + T TIG + + + + +WD GQE Sbjct: 23 HKVIIVGLDNAGKTTILYQFSMNEVVHT-SPTIGSNVEEIVI----NNTRFLMWDIGGQE 77 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDD 128 + +YY +++V D T+ + + L + H + ++ NK D+ + Sbjct: 78 SLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKE 137 Query: 129 KRVVPK 134 V + Sbjct: 138 CMTVAE 143 >3BH6-A nrPDB Length = 164 Score = 116 bits (290), Expect = 1e-26, Method: Composition-based stats. Identities = 37/164 (22%), Positives = 69/164 (42%), Gaps = 9/164 (5%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 ++LL+G GKT +L + + + + T G F IK+V+ QG KL +WD G + Sbjct: 6 RILLLGLDNAGKTTLLKQLASEDI-SHITPTQG--FNIKSVQSQG--FKLNVWDIGGLRK 60 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANED-VERMLLGNKCDMDDK 129 SY+ ++ V D + K FE + L + E V ++ NK D+ Sbjct: 61 IRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTA 120 Query: 130 RVVPK-GKGEQIA--REHGIRFFETSAKANINIEKAFLTLAEDI 170 + +G + R+ + SA ++ + +++ Sbjct: 121 APASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNV 164 >5DE3-A nrPDB Length = 169 Score = 116 bits (290), Expect = 1e-26, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 66/170 (38%), Gaps = 19/170 (11%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 ++L++G GKT +L S++ TT T G F IK++ G L+IWD GQ+ Sbjct: 2 RILVLGLDNAGKTTILKALSEEDI-TTITPTQG--FNIKSLSRDG--FNLKIWDIGGQKS 56 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRN-IDEHANEDVERMLLGNKCDMDDK 129 +Y+ ++ V D + K L + E V ++ NK D+ Sbjct: 57 IRPYWRNYFDQTDALIYVIDSADSKRLSESEFELTELLQEEKMTGVPLLVFANKQDL--- 113 Query: 130 RVVPKGKGEQIAREHGIRFFE--------TSAKANINIEKAFLTLAEDIL 171 V ++IA + SAK +++ + + + Sbjct: 114 --VGALAADEIASTLDLTSIRDRPWQIQACSAKQGTGLKEGMEWMMKQVK 161 >4WNR-A nrPDB Length = 349 Score = 115 bits (289), Expect = 1e-26, Method: Composition-based stats. Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 5/162 (3%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 K+LL+GD GKT +L R + F+ T GI+ K + + K+IK+ WD GQE Sbjct: 43 KVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIKVNFWDFGGQEI 102 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKR 130 H + +LV D + E WL++I + ++ NK D + Sbjct: 103 MHATHQFFLSKRSLYILVLDS---RRDEKAEYWLKHIRSFGGDS-PVLVALNKIDENPSF 158 Query: 131 VVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 + + ++ FF S K + IE L +++L+ Sbjct: 159 ELNRKFLQEKYPSIK-GFFRISCKEDRGIEGFSQKLKKELLK 199 >1KSG-A nrPDB Length = 186 Score = 115 bits (289), Expect = 1e-26, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 9/169 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +LL++G GKT +L +F + T T+G F IKT+E +G KL IWD GQ+ Sbjct: 19 LRLLMLGLDNAGKTTILKKF-NGEDVDTISPTLG--FNIKTLEHRG--FKLNIWDVGGQK 73 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNID-EHANEDVERMLLGNKCDMDD 128 + +Y+ G++ V D + + ++ + L+++ E ++ NK D+ Sbjct: 74 SLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPG 133 Query: 129 K-RVVPKGKGEQI--AREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 + ++ R H R SA ++ L +DI + Sbjct: 134 ALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSRV 182 >3D6T-B nrPDB Length = 171 Score = 109 bits (272), Expect = 1e-24, Method: Composition-based stats. Identities = 34/128 (26%), Positives = 68/128 (53%), Gaps = 7/128 (5%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNT--TFISTIGIDFKIKTVELQGKKIK---LQIWD 64 KL+++G++G GKT +L + + +T+GID K ++++ K+ + L +WD Sbjct: 1 MKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWD 60 Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKS-FENISKWLRNIDEHANEDVERMLLGNK 123 AG+E F++ + + VYD++ G++ + + WL NI A+ +L+G Sbjct: 61 FAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSS-PVILVGTH 119 Query: 124 CDMDDKRV 131 D+ D++ Sbjct: 120 LDVSDEKQ 127 >2X77-A nrPDB Length = 189 Score = 107 bits (269), Expect = 2e-24, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 65/173 (37%), Gaps = 9/173 (5%) Query: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64 D ++L++G GKT +L+R TT + + ++T++ K I ++WD Sbjct: 18 PADRKIRVLMLGLDNAGKTSILYRLHLGDVVTTVPT---VGVNLETLQY--KNISFEVWD 72 Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNK 123 GQ Y+ ++ V D T+ + +DE ++ NK Sbjct: 73 LGGQTGVRPYWRCYFSDTDAVIYVVDSTDRDRMGVAKHELYALLDEDELRKSLLLIFANK 132 Query: 124 CDMDD---KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 D+ D + + + G ++S+K + + L E + + Sbjct: 133 QDLPDAASEAEIAEQLGVSSIMNRTWTIVKSSSKTGDGLVEGMDWLVERLREQ 185 >4C0K-A nrPDB Length = 423 Score = 107 bits (267), Expect = 4e-24, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 18/167 (10%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFK------IKTVELQGKKIKLQI 62 ++K +IG G GKT + F IG +FK I +V++ G++ L + Sbjct: 246 VYKCHVIGPKGSGKTGMCRGFL----VEDMHKLIGKEFKTNVVNCINSVQVYGQEKHLIL 301 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGN 122 D + + + + VYD +N +SFE +++ I +A + M++G Sbjct: 302 RDIDVRHALDPLQPQEVNCDVACL-VYDSSNPRSFEYVARIY--IKYYAESKIPVMIVGT 358 Query: 123 KCDMDDKRVVPKGKGEQIAREHGI--RFFETSAKANINIEKAFLTLA 167 KCDMD++R + + ++ + S K N ++ + LA Sbjct: 359 KCDMDERRQDYLMQPSEFCDKYKLLPPHLF-SLKTNK--KELYTKLA 402 >6HLU-A nrPDB Length = 974 Score = 98.3 bits (244), Expect = 2e-21, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 12/170 (7%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDF------KIKTVELQG--KKIKLQ 61 K+ LIGD GKT +L + + F+ T G++ IK +E K+ Sbjct: 481 IKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFH 540 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 WD GQE H + + ML+ D ++ N WLR+I+++ + +++ Sbjct: 541 FWDFGGQEIMHASHQFFMTRSSVYMLLLDS---RTDSNKHYWLRHIEKYGGKS-PVIVVM 596 Query: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL 171 NK D + + + K + RF S K +E +L +L Sbjct: 597 NKIDENPSYNIEQKKINERFPAIENRFHRISCKNGDGVESIAKSLKSAVL 646 >3DPU-A nrPDB Length = 535 Score = 98.3 bits (244), Expect = 2e-21, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 12/170 (7%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDF------KIKTVELQG--KKIKLQ 61 K+ LIGD GKT +L + + F+ T G++ IK +E K+ Sbjct: 42 IKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFH 101 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 WD GQE H + + ML+ D ++ N WLR+I+++ + +++ Sbjct: 102 FWDFGGQEIMHASHQFFMTRSSVYMLLLDS---RTDSNKHYWLRHIEKYGGKS-PVIVVM 157 Query: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL 171 NK D + + + K + RF S K +E +L +L Sbjct: 158 NKIDENPSYNIEQKKINERFPAIENRFHRISCKNGDGVESIAKSLKSAVL 207 >3IHW-A nrPDB Length = 184 Score = 96.0 bits (238), Expect = 8e-21, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 71/166 (42%), Gaps = 13/166 (7%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K+ ++G+ GK+ ++ R+ + G FK K + + G+ L I D G Sbjct: 21 LKVGIVGNLSSGKSALVHRYLTGTYVQEESPE-GGRFK-KEIVVDGQSYLLLIRDEGGPP 78 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCD--- 125 + ++ V+ + + SF+ + + + N +V +L+G D Sbjct: 79 EL-----QFAAWVDAVVFVFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGT-QDAIS 132 Query: 126 MDDKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDI 170 + RV+ + +++ + ++ET A +N+E+ F +A+ + Sbjct: 133 AANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKV 178 >4V0N-A nrPDB Length = 169 Score = 93.7 bits (232), Expect = 5e-20, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 64/164 (39%), Gaps = 9/164 (5%) Query: 12 LLLIGDSGVGKTCVLFRFS-DDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 +L++G GKT ++ R T+G E++ + ++D +G R Sbjct: 9 VLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVGFTVD----EVEKGPLTFTVFDMSGAGR 64 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDDK 129 + T+ YYR A ++ V D + + ++ +H+N V + NK D+ Sbjct: 65 YRTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYFANKKDLPVA 124 Query: 130 R---VVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 + + G ++ + ++ ++K LAE + Sbjct: 125 MPPVEIAQALGLDDIKDRPWQIVPSNGLTGEGVDKGIDWLAERL 168 >2H57-A nrPDB Length = 190 Score = 87.9 bits (217), Expect = 2e-18, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 64/167 (38%), Gaps = 13/167 (7%) Query: 12 LLLIGDSGVGKTCVLFRFS-DDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 +L +G GKT ++ + +A + + TIG + + + + ++D +GQ R Sbjct: 24 VLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIE----KFKSSSLSFTVFDMSGQGR 79 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH---ANEDVERMLLGNKCDMD 127 + + YY+ I+ V D ++ + L + H + + + NK D+ Sbjct: 80 YRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLR 139 Query: 128 DKRVVPKGKGEQIA----REHGIRFFETSAKANINIEKAFLTLAEDI 170 D V + + ++ + A +++ L + I Sbjct: 140 DA-VTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQDQI 185 >2IWR-A nrPDB Length = 178 Score = 85.2 bits (210), Expect = 2e-17, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 73/176 (41%), Gaps = 17/176 (9%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +L ++GD+ GK+ ++ RF ++ T + K + + G+ + I + AG Sbjct: 8 LRLGVLGDARSGKSSLIHRFLTGSY-QVLEKT-ESEQYKKEMLVDGQTHLVLIREEAGAP 65 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANED---VERMLLGNKCD- 125 + A ++ V+ + + SF+ +S+ + E + L+G D Sbjct: 66 D-----AKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGT-QDR 119 Query: 126 --MDDKRVVPKGKGEQIAREHG-IRFFETSAKANINIEKAFLTLAEDI--LRKTPV 176 RVV + + + ++ET A +N+++ F +A+ + LRK Sbjct: 120 ISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRKQQQ 175 >5DI3-B nrPDB Length = 263 Score = 82.2 bits (202), Expect = 1e-16, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 6/117 (5%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERF 71 + L+G GKT +L + T G + + L K K++++D G + Sbjct: 7 IALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFN----STTLNEGKYKIEVFDLGGGKNI 61 Query: 72 HTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHA-NEDVERMLLGNKCDMD 127 + Y I+ V D + FE + + E+ D + NK D+ Sbjct: 62 RGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIFANKQDLP 118 >4M9Q-A nrPDB Length = 227 Score = 82.2 bits (202), Expect = 1e-16, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 6/117 (5%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERF 71 + L+G GKT +L + T G + + L K K++++D G + Sbjct: 7 IALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFN----STTLNEGKYKIEVFDLGGGKNI 61 Query: 72 HTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHA-NEDVERMLLGNKCDMD 127 + Y I+ V D + FE + + E+ D + NK D+ Sbjct: 62 RGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIFANKQDLP 118 >1M2O-B nrPDB Length = 190 Score = 81.8 bits (201), Expect = 2e-16, Method: Composition-based stats. Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 20/173 (11%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KLL +G GKT +L +D ++T+ + + EL IK +D G + Sbjct: 25 KLLFLGLDNAGKTTLLHMLKNDR-----LATLQPTWHPTSEELAIGNIKFTTFDLGGHIQ 79 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDDK 129 + Y+ GI+ + D + + F+ L + A +DV ++LGNK D + Sbjct: 80 ARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNA 139 Query: 130 RVVPKGK---GEQIAREHGIRFFE---------TSAKANINIEKAFLTLAEDI 170 V + + + G + E S +AF L++ I Sbjct: 140 --VSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWLSQYI 190 >4BAS-A nrPDB Length = 199 Score = 81.8 bits (201), Expect = 2e-16, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 69/177 (38%), Gaps = 17/177 (9%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFI-STIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 ++++ G GKT ++ + ++ I +T+G + ++T E ++ ++D G Sbjct: 18 LQVVMCGLDNSGKTTIINQVKPAQSSSKHITATVG--YNVETFE--KGRVAFTVFDMGGA 73 Query: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANE--------DVERMLL 120 ++F + +YY ++ V D ++ + ++ + +H + V + Sbjct: 74 KKFRGLWETYYDNIDAVIFVVDSSDHLRLCVVKSEIQAMLKHEDIRRELPGGGRVPFLFF 133 Query: 121 GNKCDMDDKRV----VPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173 NK D + V + +H F ++ + + F L E R+ Sbjct: 134 ANKMDAAGAKTAAELVEILDLTTLMGDHPFVIFASNGLKGTGVHEGFSWLQETASRQ 190 >6GNI-B nrPDB Length = 167 Score = 81.0 bits (199), Expect = 3e-16, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 64/169 (37%), Gaps = 20/169 (11%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KLL +G GKT +L +D ++T+ + + EL IK +D G + Sbjct: 3 KLLFLGLDNAGKTTLLHMLKNDR-----LATLQPTWHPTSEELAIGNIKFTTFDLGGHIQ 57 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDDK 129 + Y+ GI+ + D + + F+ L + A +DV ++LGNK D + Sbjct: 58 ARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNA 117 Query: 130 RVVPKGK---GEQIAREHGIRFFE---------TSAKANINIEKAFLTL 166 V + + + G + E S +AF L Sbjct: 118 --VSEAELRSALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAFQWL 164 >2GAO-A nrPDB Length = 208 Score = 76.4 bits (187), Expect = 8e-15, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 60/179 (33%), Gaps = 27/179 (15%) Query: 11 KLLLIGDSGVGKTCVLFRFSD---DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67 KL+ +G GKT +L D T T + + + G + +D G Sbjct: 37 KLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPT------SEELTIAG--MTFTTFDLGG 88 Query: 68 QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCD- 125 E+ + +Y GI+ + D + L + +V ++LGNK D Sbjct: 89 HEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDR 148 Query: 126 -----MDDKRVV------PKGKGEQIAREHGIRFFE---TSAKANINIEKAFLTLAEDI 170 + R + GKG +E R E S + F L++ I Sbjct: 149 TDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 207 >1F6B-A nrPDB Length = 198 Score = 74.8 bits (183), Expect = 2e-14, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 62/179 (34%), Gaps = 27/179 (15%) Query: 11 KLLLIGDSGVGKTCVLFRFSD---DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67 KL+ +G GKT +L D T T + + + G + +D G Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPT------SEELTIAG--MTFTTFDLGG 78 Query: 68 QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDM 126 + + +Y GI+ + D + + + L ++ +V ++LGNK D Sbjct: 79 HIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDR 138 Query: 127 DDK------RVV------PKGKGEQIAREHGIRFFE---TSAKANINIEKAFLTLAEDI 170 + R + GKG +E R E S + F +A+ I Sbjct: 139 PEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197 >6GDG-D nrPDB Length = 248 Score = 69.5 bits (169), Expect = 1e-12, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 4/130 (3%) Query: 3 KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQI 62 K+ Y +LLL+G GK+ ++ + + F+ K ++ K+ + Sbjct: 29 KQVYRATHRLLLLGADNSGKSTIVKQMRILHGGSGGSGGTSGIFETK-FQVD--KVNFHM 85 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN-EDVERMLLG 121 +D GQ + I+ V D ++ + ++I + + +L Sbjct: 86 FDVGGQRDERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNLFKSIWNNRWLRTISVILFL 145 Query: 122 NKCDMDDKRV 131 NK D+ ++V Sbjct: 146 NKQDLLAEKV 155 >3T1O-A nrPDB Length = 198 Score = 64.8 bits (157), Expect = 3e-11, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 67/186 (36%), Gaps = 17/186 (9%) Query: 5 TYDLLFKLLLIGDSGVGKTCVLF-------RFSDDAFN---TTFISTIGIDFKIKTV-EL 53 ++ FK++ G GKT L T T+ DF + E+ Sbjct: 10 NREINFKIVYYGPGLSGKTTNLKWIYSKVPEGRKGEMVSLATEDERTLFFDFLPLDIGEV 69 Query: 54 QGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITN---GKSFENISKWLRNIDEH 110 +G K + ++ GQ ++ RG GI+ V D + E++ N+ E+ Sbjct: 70 KGFKTRFHLYTVPGQVFYNASRKLILRGVDGIVFVADSAPNRLRANAESMRNMRENLAEY 129 Query: 111 AN--EDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAE 168 +DV ++ NK D+ D V + + E E A + + ++ Sbjct: 130 GLTLDDVPIVIQVNKRDLPDALPVEMVRAV-VDPEGKFPVLEAVATEGKGVFETLKEVSR 188 Query: 169 DILRKT 174 +L + Sbjct: 189 LVLARV 194 >2GJ9-A nrPDB Length = 172 Score = 63.7 bits (154), Expect = 5e-11, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 53/165 (32%), Gaps = 21/165 (12%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDA--FNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 K+++ G GK+ +L + T T D + + + G L I Sbjct: 1 GSHGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTT-RDVLREHIHIDGMP--LHII 57 Query: 64 DTAGQ-------ERFHTITT-SYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDV 115 DTAG ER A ++ + D T + + W + Sbjct: 58 DTAGLREASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIW-PEFIARLPAKL 116 Query: 116 ERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIE 160 ++ NK D+ G+ ++ +G SA+ ++ Sbjct: 117 PITVVRNKADI-------TGETLGMSEVNGHALIRLSARTGEGVD 154 >5YMX-A nrPDB Length = 203 Score = 63.3 bits (153), Expect = 7e-11, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 71/189 (37%), Gaps = 22/189 (11%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDA-----------FNTTFISTIGIDFKIK 49 + + ++ K++ G GKT L ++ + +T T+ DF Sbjct: 4 INYSSREINCKIVYYGPGLCGKTTNL-QYIYNKTAAETKGKLISLSTETDRTLFFDFLPL 62 Query: 50 TV-ELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDI------TNGKSFENISK 102 ++ E++G K + ++ GQ + +G G++ V D N +S EN+ Sbjct: 63 SLGEIRGFKTRFHLYTVPGQVFYDASRKLILKGVDGVVFVADSQIERMEANMESLENLRI 122 Query: 103 WLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKA 162 L + + ++ NK D+ + V + + I ++ A + + Sbjct: 123 NLAE-QGYDLNKIPYVIQYNKRDLPNA--VTVEEMRKALNHRNIPEYQAVAPTGVGVFDT 179 Query: 163 FLTLAEDIL 171 +A+ +L Sbjct: 180 LKAVAKLVL 188 >6IAE-A nrPDB Length = 223 Score = 61.4 bits (148), Expect = 2e-10, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 71/215 (33%), Gaps = 46/215 (21%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRF--SDDAFNTTFISTIGIDFKIKTVELQG---- 55 A D L K+L++G S GK+ V + D + T + + L Sbjct: 2 AASMSDDLVKILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVEIALDDTRRS 61 Query: 56 -------KKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNID 108 KK +Q+WD G + + A GI+ V++ S + + W +N Sbjct: 62 GRQAAGLKKAVVQLWDVGGSSKHQAGWPAIASNADGIIYVFNPEVKGSEKELLLWYKNFA 121 Query: 109 EHANEDVERMLLGNKCDMDDKRVVPKGKGEQI----------------------AREHGI 146 + +E D D+ + G + + GI Sbjct: 122 LNQDE----------LDDDNNFKMRVTDGHSLIFSHHSSLPEFAVGDNAIPPMPKQLQGI 171 Query: 147 RFFETSAKAN-INIEKAFLTLAEDILRKTPVKEPN 180 R ETS N ++AF L E I+ E N Sbjct: 172 RALETSLDYQSDNFKEAFDALVEQIIASRLAAEEN 206 >5KU1-A nrPDB Length = 424 Score = 61.0 bits (147), Expect = 3e-10, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 16/151 (10%) Query: 3 KKTYDLLFKLLLIGDSGVGKT----CVLFRFS--DDAFNTTFISTIGIDFKIKTVELQGK 56 K+T +F+ +IG GK+ +L R S + I TV + G+ Sbjct: 236 KQTQRNVFRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKS----YYAINTVYVYGQ 291 Query: 57 KIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVE 116 + L + D + E +T + + LVYD++N KSFE ++ + + + Sbjct: 292 EKYLLLHDISESE---FLTEAEIIC-DVVCLVYDVSNPKSFEYCARIFKQ--HFMDSRIP 345 Query: 117 RMLLGNKCDMDDKRVVPKGKGEQIAREHGIR 147 +++ K D+ + + R+H + Sbjct: 346 CLIVAAKSDLHEVKQEYSISPTDFCRKHKMP 376 >5KSO-A nrPDB Length = 190 Score = 61.0 bits (147), Expect = 3e-10, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 61/151 (40%), Gaps = 16/151 (10%) Query: 3 KKTYDLLFKLLLIGDSGVGKT----CVLFRFS--DDAFNTTFISTIGIDFKIKTVELQGK 56 K+T +F+ +IG GK+ +L R S + I TV + G+ Sbjct: 2 KQTQRNVFRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKS----YYAINTVYVYGQ 57 Query: 57 KIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVE 116 + L + D + E +T + + LVYD++N KSFE ++ + + + Sbjct: 58 EKYLLLHDISESE---FLTEAEIIC-DVVCLVYDVSNPKSFEYCARIFKQ--HFMDSRIP 111 Query: 117 RMLLGNKCDMDDKRVVPKGKGEQIAREHGIR 147 +++ K D+ + + R+H + Sbjct: 112 CLIVAAKSDLHEVKQEYSISPTDFCRKHKMP 142 >6G79-A nrPDB Length = 225 Score = 60.2 bits (145), Expect = 5e-10, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 39/117 (33%), Gaps = 4/117 (3%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 KLLL+G GK+ ++ + G I K + +++D GQ Sbjct: 32 KLLLLGADNSGKSTIVKQM---KIIHGGSGGSGGTTGIVETHFTFKNLHFRLFDVGGQRS 88 Query: 71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNI-DEHANEDVERMLLGNKCDM 126 + I+ D+++ +I + D +L NK D+ Sbjct: 89 ERKKWIHCFEDVTAIIFCVDLSDYNRMHESLMLFDSICNNKFFIDTSIILFLNKKDL 145 >2E87-A nrPDB Length = 357 Score = 59.8 bits (144), Expect = 7e-10, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 63/176 (35%), Gaps = 26/176 (14%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVEL---QGKKIKLQIWDTAGQ 68 +++ G VGK+ +L + F + + + + + QI DT G Sbjct: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYP-----FTTRGINVGQFEDGYFRYQIIDTPGL 224 Query: 69 -----------ERFHTITTSYYRGAMGIMLVYDITNGKSF--ENISKWLRNIDEHANEDV 115 E+ + Y I+ ++D + F E + +D+ Sbjct: 225 LDRPISERNEIEKQAILALRYL--GNLIIYIFDPSEHCGFPLEEQIHLFEEVHGEF-KDL 281 Query: 116 ERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL 171 +++ NK D+ D+ + + + + +E G+ + SA I+ + + + Sbjct: 282 PFLVVINKIDVADEENIKRLE--KFVKEKGLNPIKISALKGTGIDLVKEEIIKTLR 335 >6CES-A nrPDB Length = 313 Score = 59.8 bits (144), Expect = 8e-10, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 68/159 (42%), Gaps = 21/159 (13%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFI---STIGIDFKIKTVELQGKKIKLQIWDTAG 67 K+LL+G SG GKT + + +TI ++ + L +WD G Sbjct: 9 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFL---GNLVLNLWDCGG 65 Query: 68 QERF-----HTITTSYYRGAMGIMLVYDITNGKSFENISKW---LRNIDEHANEDVERML 119 Q+ F + + +R ++ V+D+ + + +++ + L I +++ + L Sbjct: 66 QDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKIFCL 125 Query: 120 LGNKCDM--DDKRVV----PKGKGEQIAREHGIRFFETS 152 + +K D+ +D+R + + +++R F TS Sbjct: 126 V-HKMDLVQEDQRDLIFKEREEDLRRLSRPLECACFRTS 163 >5J8B-z nrPDB Length = 679 Score = 57.9 bits (139), Expect = 3e-09, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 67/185 (36%), Gaps = 31/185 (16%) Query: 21 GKTCVLFRFSD-----------DAFNT--TFISTIGIDFKIKTVEL-----QGKKIKLQI 62 GK+ + R + + F GI K V + G++ + Sbjct: 90 GKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDGEEYVFHL 149 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGN 122 DT G F + G++LV D + G E ++K+ EH + + + N Sbjct: 150 IDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFY-MALEHGHVIIPVI---N 205 Query: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFET---SAKANINIEKAFLTLAEDILRKTPVKEP 179 K D+ + R P ++ G+ E S K +E+ + E I+++ P + Sbjct: 206 KIDLPNAR--PLEVALEVEEVLGLPADEAIFASGKTGEGVEE----ILEAIVQRIPPPKG 259 Query: 180 NSENV 184 + E Sbjct: 260 DPEAP 264 >5IMR-C nrPDB Length = 610 Score = 57.9 bits (139), Expect = 3e-09, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 67/185 (36%), Gaps = 31/185 (16%) Query: 21 GKTCVLFRFSD-----------DAFNT--TFISTIGIDFKIKTVEL-----QGKKIKLQI 62 GK+ + R + + F GI K V + G++ + Sbjct: 21 GKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDGEEYVFHL 80 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGN 122 DT G F + G++LV D + G E ++K+ EH + + + N Sbjct: 81 IDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFY-MALEHGHVIIPVI---N 136 Query: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFET---SAKANINIEKAFLTLAEDILRKTPVKEP 179 K D+ + R P ++ G+ E S K +E+ + E I+++ P + Sbjct: 137 KIDLPNAR--PLEVALEVEEVLGLPADEAIFASGKTGEGVEE----ILEAIVQRIPPPKG 190 Query: 180 NSENV 184 + E Sbjct: 191 DPEAP 195 >2LKD-A nrPDB Length = 178 Score = 57.1 bits (137), Expect = 4e-09, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 62/168 (36%), Gaps = 16/168 (9%) Query: 21 GKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYR 80 GKT +L I V + KKI DT G E F T+ + Sbjct: 20 GKTTLLDAIRHSKVTEQEAGGITQHIGAYQVTVNDKKITF--LDTPGHEAFTTMRARGAQ 77 Query: 81 GAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDD---KRVVPK-GK 136 ++LV +G + + + I+ +V ++ NK D + RV+ + + Sbjct: 78 VTDIVILVVAADDG----VMPQTVEAINHAKAANVPIIVAINKMDKPEANPDRVMQELME 133 Query: 137 GEQIAREHG--IRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182 + E G F + SAK ++ L E IL + ++E + Sbjct: 134 YNLVPEEWGGDTIFCKLSAKTKEGLD----HLLEMILLVSEMEELKAN 177 >4ARZ-A nrPDB Length = 310 Score = 56.0 bits (134), Expect = 1e-08, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 17/134 (12%) Query: 11 KLLLIGDSGVGKTCVLFRFSDD--AFNT-TFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67 KLLL+G SG GK+ + + AF+T +TI ++ + L +WD G Sbjct: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFL---GNMTLNLWDCGG 64 Query: 68 QE-----RFHTITTSYYRGAMGIMLVYDITNGKSFENIS---KWLRNIDEHANEDVERML 119 Q+ F ++ ++ V+D+ + + ++I K L+ + ++ + D + + Sbjct: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKY-SPDAKIFV 123 Query: 120 LGNKCDMD--DKRV 131 L +K D+ DKR Sbjct: 124 LLHKMDLVQLDKRE 137 >1XZP-A nrPDB Length = 482 Score = 55.2 bits (132), Expect = 2e-08, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 70/171 (40%), Gaps = 23/171 (13%) Query: 10 FKLLLIGDSGVGKTCVLFRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG- 67 +++++G VGK+ +L R + D T I D + + ++G I +I DTAG Sbjct: 244 LRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRG--ILFRIVDTAGV 301 Query: 68 -------QERFHTITT-SYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERML 119 ER T A ++ V D ++ E K L I ++ Sbjct: 302 RSETNDLVERLGIERTLQEIEKADIVLFVLDASSPL-DEEDRKILERIKNKRY-----LV 355 Query: 120 LGNKCDMDDKRVVPKGKGE-QIAREHGIRFFETSAKANINIEKAFLTLAED 169 + NK D+ +K + + + + ++ + + + SA +EK ++ + Sbjct: 356 VINKVDVVEK--INEEEIKNKLGTDRHM--VKISALKGEGLEKLEESIYRE 402 >3GEH-A nrPDB Length = 462 Score = 54.4 bits (130), Expect = 3e-08, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 76/198 (38%), Gaps = 25/198 (12%) Query: 10 FKLLLIGDSGVGKTCVLFRF--SDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67 K+ ++G VGK+ +L + SD A T T D + + G + Q+ DTAG Sbjct: 225 LKVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTT-RDVVESQLVVGGIPV--QVLDTAG 281 Query: 68 ------Q-ERFHTIT-TSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERML 119 Q E+ A ++L D G + + + + +L Sbjct: 282 IRETSDQVEKIGVERSRQAANTADLVLLTIDAATGWTTGD-QEIYEQVKHR-----PLIL 335 Query: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 179 + NK D+ +K+++ + E+ + T+A I+ T +I++ V+ Sbjct: 336 VMNKIDLVEKQLITSLE----YPENITQIVHTAAAQKQGIDSL-ETAILEIVQTGKVQAA 390 Query: 180 NSE-NVDISSGGGVTGWK 196 + + ++ +T K Sbjct: 391 DMDLAINQRQAAALTQAK 408 >6D4G-A nrPDB Length = 271 Score = 54.0 bits (129), Expect = 4e-08, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 6/92 (6%) Query: 83 MGIMLVYDITNG--KSFENISKWLRNI-DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQ 139 G +L D++ G ++F++ K++ N+ ++ A +++ KCD +R + Sbjct: 163 DGFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKKPIVIVLTKCDEGVERYI--RDAHT 220 Query: 140 IA-REHGIRFFETSAKANINIEKAFLTLAEDI 170 A + ++ ETSA++N+N++ AF TL + I Sbjct: 221 FALSKKNLQVVETSARSNVNVDLAFSTLVQLI 252 Score = 28.6 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 4/43 (9%) Query: 16 GDSGVGKTCVLFRFSD---DAFNTTFISTIG-IDFKIKTVELQ 54 G G+GK+C+ RF D F+ S + DF + V Sbjct: 34 GQCGIGKSCLCNRFVRPSADEFHLDHTSVLSTSDFGGRVVNND 76 >1MKY-A nrPDB Length = 439 Score = 54.0 bits (129), Expect = 4e-08, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 76/192 (39%), Gaps = 34/192 (17%) Query: 12 LLLIGDSGVGKTCVLFRFSDDA--FNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG-- 67 +L++G VGK+ + + + D TVE GK KL DT G Sbjct: 4 VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEG-VTRDPVQDTVEWYGKTFKL--VDTCGVF 60 Query: 68 -------QERFHTITTSYYRGAMGIMLVYD----ITNGKSFENISKWLRNIDEHANEDVE 116 ++ +T + R A ++ V D IT E+++ +LR V+ Sbjct: 61 DNPQDIISQKMKEVTLNMIREADLVLFVVDGKRGITKED--ESLADFLRK------STVD 112 Query: 117 RMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFE---TSAKANINIEKAFLTLAEDILRK 173 +L+ NK ++ R + ++ + + F E SA+ NIN++ T+ + + K Sbjct: 113 TILVANKA--ENLREFEREVKPEL---YSLGFGEPIPVSAEHNINLDTMLETIIKKLEEK 167 Query: 174 TPVKEPNSENVD 185 E E D Sbjct: 168 GLDLESKPEITD 179 Score = 48.7 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 58/171 (33%), Gaps = 28/171 (16%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKT---VELQGKKIKLQIWDTA 66 K+ ++G VGK+ + + +S I + V + G+K DTA Sbjct: 181 IKVAIVGRPNVGKSTLFNAILNKE--RALVSPIPGTTRDPVDDEVFIDGRKYVF--VDTA 236 Query: 67 GQ-----------ERFHTITTS-YYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANED 114 G E++ A +++V D T G + ++ R Sbjct: 237 GLRRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQD----QRMAGLMERRG 292 Query: 115 VERMLLGNKCDMDDKRVVPKGKGEQIAREHGI-----RFFETSAKANINIE 160 +++ NK D+ R + ++ RE TSA NI+ Sbjct: 293 RASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNID 343 >3CB4-D nrPDB Length = 599 Score = 53.7 bits (128), Expect = 5e-08, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 59/174 (33%), Gaps = 33/174 (18%) Query: 21 GKTCV---LFRFSDDAFNTTFISTI----------GIDFKIKTVELQ-----GKKIKLQI 62 GK+ + + + + + + GI K ++V L G+ +L Sbjct: 16 GKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDYKASDGETYQLNF 75 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDI---TNGKSFENISKWLRNIDEHANEDVERML 119 DT G F + G +LV D ++ N + D+E + Sbjct: 76 IDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEM-------DLEVVP 128 Query: 120 LGNKCDM---DDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 + NK D+ D +RV + E I SAK + ++ L DI Sbjct: 129 VLNKIDLPAADPERV--AEEIEDIVGIDATDAVRCSAKTGVGVQDVLERLVRDI 180 >3C5H-A nrPDB Length = 255 Score = 53.7 bits (128), Expect = 5e-08, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 6/92 (6%) Query: 83 MGIMLVYDITNG--KSFENISKWLRNI-DEHANEDVERMLLGNKCDMDDKRVVPKGKGEQ 139 G +L D++ G ++F++ K++ N+ ++ A +++ KCD +R + Sbjct: 164 DGFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKKPIVVVLTKCDEGVERYI--RDAHT 221 Query: 140 IA-REHGIRFFETSAKANINIEKAFLTLAEDI 170 A + ++ ETSA++N+N++ AF TL + I Sbjct: 222 FALSKKNLQVVETSARSNVNVDLAFSTLVQLI 253 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 4/43 (9%) Query: 16 GDSGVGKTCVLFRFSD---DAFNTTFISTIG-IDFKIKTVELQ 54 G G+GK+C+ RF D F+ S + DF + V Sbjct: 35 GQCGIGKSCLCNRFVRPSADEFHLDHTSVLSTSDFGGRVVNND 77 >2CXX-A nrPDB Length = 190 Score = 52.9 bits (126), Expect = 9e-08, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 69/191 (36%), Gaps = 36/191 (18%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG---- 67 ++ G S VGK+ +++R + G+ K +E++ K K I D G Sbjct: 4 IIFAGRSNVGKSTLIYRLTGKKVRRGKRP--GVT--RKIIEIEWKNHK--IIDMPGFGFM 57 Query: 68 -------QERFHTITTSYY----RGAMGIMLVYDITNGKSFENISKWLRN----IDEHAN 112 QER + + +LV D + E I +W + ID Sbjct: 58 MGLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVD--GKAAPEIIKRWEKRGEIPIDVEFY 115 Query: 113 E-----DVERMLLGNKCD-MDDKRVVPKGKGEQI---AREHGIRFFETSAKANINIEKAF 163 + D+ ++ NK D + + + V E+ E F SAK NIE+ Sbjct: 116 QFLRELDIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKVFIPISAKFGDNIERLK 175 Query: 164 LTLAEDILRKT 174 + E I + Sbjct: 176 NRIFEVIRERQ 186 >1WF3-A nrPDB Length = 301 Score = 52.1 bits (124), Expect = 1e-07, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 77/212 (36%), Gaps = 44/212 (20%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60 MA+KTY + ++G VGK+ +L +++ + +G++ ++ Sbjct: 1 MAEKTYSGF--VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRR-QI 57 Query: 61 QIWDTAGQER-FHTI-----TTSY--YRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN 112 DT G + + Y ++ V D+ + + E+ + + + Sbjct: 58 VFVDTPGLHKPMDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPED--ELVARALKPLV 115 Query: 113 EDVERMLLGNKCDMD-------------------------DKRVVPKGKGEQIAREHGIR 147 V +L+GNK D D+R V + K + +A Sbjct: 116 GKVPILLVGNKLDAAKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLALMPEGP 175 Query: 148 FF--ETSAKANINIEKAFLTLAEDILRKTPVK 177 FF E AK+ ++ F +ILR+ +K Sbjct: 176 FFYPEDYAKS----DQTFGEWVAEILREEAMK 203 >5KUT-A nrPDB Length = 189 Score = 51.4 bits (122), Expect = 3e-07, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 9/138 (6%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD--TAGQE 69 ++G GVGK+ L F + I TV++ G++ L + + T G Sbjct: 12 CKVVGACGVGKSAFLQAFLGRGLGHQDTREQPPGYAIDTVQVNGQEKYLILCEVGTDGL- 70 Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK 129 + TS L++D ++ KSF + + ++ + + + + +K D+ + Sbjct: 71 ----LATSLDATCDVACLMFDGSDPKSFAHCASVYKH--HYMDGQTPCLFVSSKADLPEG 124 Query: 130 RVVPKGKGEQIAREHGIR 147 V + R+H + Sbjct: 125 VAVSGPSPAEFCRKHRLP 142 >5LAD-A nrPDB Length = 404 Score = 51.0 bits (121), Expect = 4e-07, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 61/190 (32%), Gaps = 27/190 (14%) Query: 12 LLLIGDSGVGKTCVLFRFSDD--AFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +++ G VGK+ + + + + T + L DT G + Sbjct: 12 IVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTTTDPVYKSMELYPVGPVTL--VDTPGLD 69 Query: 70 RFHTI--------TTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 + +YR A +LV D +++ + ++ + +++ Sbjct: 70 DVGELGRLRVEKARRVFYR-ADCGILVTDSEPTPYEDDVVNLFKEME------IPFVVVV 122 Query: 122 NKCDMDDKRVVPKGKGEQIARE-HGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180 NK D+ ++ + + + + + SA F + + I P E Sbjct: 123 NKIDVLGEKA---EELKGLYESRYEAKVLLVSALQKKG----FDDIGKTISEILPGDEEI 175 Query: 181 SENVDISSGG 190 D+ GG Sbjct: 176 PYLGDLIDGG 185 >3K53-A nrPDB Length = 271 Score = 51.0 bits (121), Expect = 4e-07, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 63/162 (38%), Gaps = 12/162 (7%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG---- 67 + L+G+ VGKT + + + G+ + K ++ ++ + + D G Sbjct: 6 VALVGNPNVGKTTIFNALTGLRQHVGNWP--GVTVEKKEGIMEYREKEFLVVDLPGIYSL 63 Query: 68 -QERFHTI-TTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 + ++ ++V DI + + ++ E +L+ NK D Sbjct: 64 TAHSIDELIARNFILDGNADVIV-DIVDSTCL--MRNLFLTLELFEMEVKNIILVLNKFD 120 Query: 126 MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167 + K+ K +++ +E G+ T+AK +E+ +A Sbjct: 121 LLKKKG-AKIDIKKMRKELGVPVIPTNAKKGEGVEELKRMIA 161 >2Q3F-A nrPDB Length = 181 Score = 50.6 bits (120), Expect = 4e-07, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 69/180 (38%), Gaps = 24/180 (13%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK---IKLQIWDTAG 67 ++LL+G GK+ + + + T+ ++ K + QIWD G Sbjct: 6 RILLMGLRRSGKSSI-QKVVFHKMSPN--ETLFLESTNKICREDVSNSSFVNFQIWDFPG 62 Query: 68 Q-ERFHTITTSYY--RGAMGIMLVYDITNGKSFENISKWLRNIDE--HANEDVERMLLGN 122 Q + F RG ++ V D + E +++ + N D+ + + Sbjct: 63 QIDFFDPTFDYEMIFRGTGALIFVIDSQD-DYMEALARLHLTVTRAYKVNTDINFEVFIH 121 Query: 123 KCD-------MDDKRVVPKGKGEQIA----REHGIRFFETSAKANINIEKAFLTLAEDIL 171 K D ++ +R + + + +A + + F+ TS +I +AF + + ++ Sbjct: 122 KVDGLSDDHKIETQRDIHQRANDDLADAGLEKIHLSFYLTSIYD-HSIFEAFSKVVQKLI 180 >6CES-C nrPDB Length = 399 Score = 50.2 bits (119), Expect = 6e-07, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 73/188 (38%), Gaps = 24/188 (12%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK---IKLQIWDTAG 67 ++LL+G GK + + + T+ ++ K + + QIWD G Sbjct: 63 RILLMGLRRSGKNSI-QKVVFHKMSPN--ETLFLESTNKIYKDDISNSSFVNFQIWDFPG 119 Query: 68 Q-ERFHTITTSYY--RGAMGIMLVYDITNGKSFENISKWLRNIDE--HANEDVERMLLGN 122 Q + F RG ++ V D + E +++ + + N D+ + + Sbjct: 120 QMDFFDPTFDYEMIFRGTGALIYVIDAQD-DYMEALTRLHITVSKAYKVNPDMNFEVFIH 178 Query: 123 KCD-------MDDKRVVPKGKGEQIA----REHGIRFFETSAKANINIEKAFLTLAEDIL 171 K D ++ +R + + + +A + + F+ TS +I +AF + + ++ Sbjct: 179 KVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYD-HSIFEAFSKVVQKLI 237 Query: 172 RKTPVKEP 179 + P E Sbjct: 238 PQLPTLEN 245 >3LLU-A nrPDB Length = 196 Score = 49.8 bits (118), Expect = 7e-07, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 71/180 (39%), Gaps = 24/180 (13%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK---IKLQIWDTAG 67 ++LL+G GK+ + + + T+ ++ K + + QIWD G Sbjct: 22 RILLMGLRRSGKSSI-QKVVFHKMSPN--ETLFLESTNKIYKDDISNSSFVNFQIWDFPG 78 Query: 68 Q-ERFHTITTSYY--RGAMGIMLVYDITNGKSFENISKWLRNIDE--HANEDVERMLLGN 122 Q + F RG ++ V D + E +++ + + N D+ + + Sbjct: 79 QMDFFDPTFDYEMIFRGTGALIYVIDAQD-DYMEALTRLHITVSKAYKVNPDMNFEVFIH 137 Query: 123 KCD-------MDDKRVVPKGKGEQIA----REHGIRFFETSAKANINIEKAFLTLAEDIL 171 K D ++ +R + + + +A + + F+ TS +I +AF + + ++ Sbjct: 138 KVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYD-HSIFEAFSKVVQKLI 196 >5ZZM-A nrPDB Length = 426 Score = 49.8 bits (118), Expect = 8e-07, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 69/178 (38%), Gaps = 35/178 (19%) Query: 12 LLLIGDSGVGKTCVLFR------FSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDT 65 + L+G + GK+ + R ++ D T T+ + V G+ + + DT Sbjct: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTL----RRIDVADVGETV---LADT 252 Query: 66 AG--QERFHTITTSY------YRGAMGIMLVYDITN---GKSFENISKWLRNIDEHANED 114 G + H + ++ R A ++ V D + ++ E ++ L ID H Sbjct: 253 VGFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHE--- 309 Query: 115 VERMLLGNKCDMDDKRV--VPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 + +L+ NK DM + + + + + R SA+ I + F L E + Sbjct: 310 IPTLLVMNKIDMLEDFEPRIDRDEENKPNRVWL------SAQTGAGIPQLFQALTERL 361 >2DYK-A nrPDB Length = 161 Score = 49.8 bits (118), Expect = 8e-07, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 39/129 (30%), Gaps = 22/129 (17%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAF-NTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67 + K++++G VGK+ + R + + D K VE + + DT G Sbjct: 1 MHKVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRG--RFLLVDTGG 58 Query: 68 -----------QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVE 116 QE+ ++++ + + + Sbjct: 59 LWSGDKWEKKIQEKVDRALE------DAEVVLFAVDGRAELTQADYEVAEYLRRKGK--P 110 Query: 117 RMLLGNKCD 125 +L+ K D Sbjct: 111 VILVATKVD 119 >3R9W-A nrPDB Length = 307 Score = 49.8 bits (118), Expect = 8e-07, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 66/189 (34%), Gaps = 37/189 (19%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQI--WDTAGQ- 68 + ++G VGK+ +L + G +++ + ++ + QI DT G Sbjct: 12 VAIVGKPNVGKSTLLNNLL-GTKVSIISPKAG-TTRMRVLGVKNIPNEAQIIFLDTPGIY 69 Query: 69 ---------ERFHTITTSYYRGAMGIMLVYDITN--GKSFENI-SKWLRNIDEHANEDVE 116 I A I+ + D T E I +++ +++ Sbjct: 70 EPKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNK------P 123 Query: 117 RMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFE------TSAKANINIEKAFLTLAEDI 170 +++ NK D ++ P + E + E SA N+++ L + I Sbjct: 124 VIVVINKID----KIGPAKNVLPLIDEIHKKHPELTEIVPISALKGANLDE----LVKTI 175 Query: 171 LRKTPVKEP 179 L+ P EP Sbjct: 176 LKYLPEGEP 184 >6GB2-BC nrPDB Length = 657 Score = 49.0 bits (116), Expect = 1e-06, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 17/169 (10%) Query: 21 GKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ---GKKIKLQIWDTAGQERFHTITTS 77 GKT +L +F + T GI I + G+KI DT G F + Sbjct: 122 GKTTLLDKFRKTQVAA--VETGGITQHIGAFLVSLPSGEKITF--LDTPGHAAFSAMRAR 177 Query: 78 YYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK--RVVPKG 135 + ++LV +G + + + +I + V +L NKCD + V K Sbjct: 178 GAQVTDIVVLVVAADDG----VMKQTVESIQHAKDAQVPIILAVNKCDKAEADPEKVKKE 233 Query: 136 KG--EQIAREHG--IRFFETSAKANINIEKAFLTLAEDILRKTPVKEPN 180 + + ++G ++ SA N+ +PN Sbjct: 234 LLAYDVVCEDYGGDVQAVPVSALTGDNLMALAEATVALAEMLELKADPN 282 >3J8G-X nrPDB Length = 490 Score = 48.7 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 66/181 (36%), Gaps = 30/181 (16%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFIS--TIGIDFKIKTVELQGKKIKLQIWDTAG 67 KL ++G VGK+ + R + + T I +E G++ L DTAG Sbjct: 203 IKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYI-PMERDGREYVLI--DTAG 259 Query: 68 ----------QERFHTITT-SYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVE 116 E+F I T A +MLV D G S +++S L ++ + Sbjct: 260 VRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLS--LLGFILNSGRSLV 317 Query: 117 RMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFE------TSAKANINIEKAFLTLAEDI 170 ++ NK D + V + E + + + F + SA + F + + Sbjct: 318 IVV--NKWD-GLSQEVKEQVKETL--DFRLGFIDFARVHFISALHGSGVGNLFES-VREA 371 Query: 171 L 171 Sbjct: 372 Y 372 Score = 34.8 bits (79), Expect = 0.026, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 46/132 (34%), Gaps = 18/132 (13%) Query: 12 LLLIGDSGVGKTCVLFRF--SDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG-- 67 + L+G VGK+ + R + DA F + D K E++G++ DT G Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADF-PGLTRDRKYGRAEIEGRE--FICIDTGGID 61 Query: 68 ------QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 + R + A ++ + D +++ L+ Sbjct: 62 GTEDGVETRMAEQSLLAIEEADVVLFMVD-ARAGLMPADEAIAKHLRSREK---PTFLVA 117 Query: 122 NKCD-MDDKRVV 132 NK D +D + V Sbjct: 118 NKTDGLDPDQAV 129 >3GEE-A nrPDB Length = 476 Score = 48.7 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 53/160 (33%), Gaps = 18/160 (11%) Query: 13 LLIGDSGVGKTCVLFRFS-DDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ--- 68 ++ G GK+ +L + + + D+ + +L DTAG Sbjct: 237 VIAGKPNAGKSTLLNTLLGQERAIVSHMPGTTRDYIEECFIHDKTMFRLT--DTAGLREA 294 Query: 69 -ERF--HTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH--ANEDVERMLLGNK 123 E I S + A +++Y + + + E + L I E A+ + + + NK Sbjct: 295 GEEIEHEGIRRSRMKMAEADLILY-LLDLGT-ERLDDELTEIRELKAAHPAAKFLTVANK 352 Query: 124 CDMDDKRVVPKGKG-EQIAREHGIRFFETSAKANINIEKA 162 D R IA G SA I+ Sbjct: 353 LD----RAANADALIRAIADGTGTEVIGISALNGDGIDTL 388 >5DN8-A nrPDB Length = 446 Score = 47.1 bits (111), Expect = 5e-06, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 57/183 (31%), Gaps = 43/183 (23%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFIS--TIGIDFKIKTVELQGKKIKLQIWDTAG 67 K+ +IG VGK+ ++ R + + T I + L DTAG Sbjct: 179 IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYI-PFARNDENYTLI--DTAG 235 Query: 68 QERFHTITT-----------SYYRGAMGIMLVYD----ITNGKSFENISKWLRNIDEHAN 112 R I A ++ + D +T LR ++ Sbjct: 236 IRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQD--------LRLLNRIVE 287 Query: 113 EDVERMLLGNKCD---MDDKRVVPKGKGEQIAREHGIRFFE------TSAKANINIEKAF 163 V ++ NK D ++++ V A + + F + SA + K F Sbjct: 288 AGVSLIIAVNKWDGLNIEERDNVRN------AIDRRMPFVDFARRYFISALHGTGVGKLF 341 Query: 164 LTL 166 + Sbjct: 342 RAI 344 Score = 29.8 bits (66), Expect = 0.93, Method: Composition-based stats. Identities = 20/169 (11%), Positives = 50/169 (29%), Gaps = 20/169 (11%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFI-STIGIDFKIKTVELQGKKIKLQIWDTAGQ-- 68 + ++G VGK+ + + + D + + + +L + DT G Sbjct: 8 IAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQ--RLLLVDTGGLVD 65 Query: 69 ---ERFHTITTSYYRGA----MGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 + + + A I+ + D + + + + + Sbjct: 66 TENKEVAPLAETQVEQAIDESDCILFLVDA--KAGLVPADEIIAERLRKKGKKIFLAV-- 121 Query: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 NK D VV G + +A + ++ + E++ Sbjct: 122 NKADRARAAVVQSDF---YKLGFGEPYV-IAAASGRGVKDLMTQVLENL 166 >5KH0-A nrPDB Length = 396 Score = 46.3 bits (109), Expect = 8e-06, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 66/195 (33%), Gaps = 40/195 (20%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFN-------TTFISTIGIDFKIKTVELQGKKIKLQIWD 64 + + G VGK+ + + TT + ++ V I L D Sbjct: 11 IAITGRRNVGKSSFMNALIGQEVSIVSNVAGTTTDP-VFKSMELSPV----GPITLI--D 63 Query: 65 TAGQE--------RFHTITTSYYRGAMGIMLVYDITNGKSFEN-ISKWLRNIDEHANEDV 115 T G + R S YR GI++V DI +FE I K + ++ + Sbjct: 64 TPGLDDVGELGIKRIKKAKKSLYRADCGILIVDDI--PGNFEEQIIKLFKELE------I 115 Query: 116 ERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175 + NK D D + K +++ + + SA I F + + I P Sbjct: 116 PYFIAINKIDTIDHENIEKE-----YKKYNVPILKVSALKKIG----FEKIGKTINSILP 166 Query: 176 VKEPNSENVDISSGG 190 + D+ GG Sbjct: 167 KDDEIPYLSDLIDGG 181 >2YWH-A nrPDB Length = 600 Score = 45.2 bits (106), Expect = 2e-05, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 33/186 (17%) Query: 21 GKTCVLFRFS--DDAFNTTFIS-----TI------GIDFKIKTVEL-----QGKKIKLQI 62 GK+ + R A + T+ GI K++ V + G KL + Sbjct: 18 GKSTLADRLLEYTGAISEREKREQLLDTLDVERERGITVKMQAVRMFYKAKDGNTYKLHL 77 Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGN 122 DT G F + G +L+ D + G + ++ + + +++ D+ + + N Sbjct: 78 IDTPGHVDFSYEVSRALAACEGALLLIDASQGIEAQTVANFWKAVEQ----DLVIIPVIN 133 Query: 123 KCDMDDKRV--VPK--GKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKE 178 K D+ V V K + + E I SAK I IE+ + E I+ + P + Sbjct: 134 KIDLPSADVDRVKKQIEEVLGLDPEEAIL---ASAKEGIGIEE----ILEAIVNRIPPPK 186 Query: 179 PNSENV 184 + + Sbjct: 187 GDPQKP 192 >3V00-C nrPDB Length = 356 Score = 45.2 bits (106), Expect = 2e-05, Method: Composition-based stats. Identities = 23/183 (12%), Positives = 54/183 (29%), Gaps = 52/183 (28%) Query: 38 FISTIGIDFKIKTVELQG--------KKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVY 89 ++ T D V+ G K + +++D GQ + G I+ Sbjct: 169 YVPT-EQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTAIIFCV 227 Query: 90 DITNGKSFENISKWLRNIDEHAN-----------EDVERMLLGNKCDMDDKRVV------ 132 +++ + + + E + D +L NK D+ ++++ Sbjct: 228 ALSDYDLVLAEDEEMNRMHESMHLFNSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTI 287 Query: 133 ---------PKGKGEQIAREHGIRFFE--------------TSAKANINIEKAFLTLAED 169 + ++F E T A N++ F + + Sbjct: 288 CYPEYAGSNTYEEAGNY---IKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVTDI 344 Query: 170 ILR 172 I++ Sbjct: 345 IIK 347 Score = 28.2 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 12/18 (66%) Query: 11 KLLLIGDSGVGKTCVLFR 28 KLLL+G GK+ ++ + Sbjct: 37 KLLLLGAGESGKSTIVKQ 54 >1LNZ-A nrPDB Length = 342 Score = 44.8 bits (105), Expect = 3e-05, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 66/201 (32%), Gaps = 35/201 (17%) Query: 8 LLFKLL----LIGDSGVGKTCVLFRFSD------DAFNTTFISTIGIDFKIKTVELQGKK 57 L K+L L+G VGK+ +L S D TT + +G VE + Sbjct: 153 LELKVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLG------MVETDDGR 206 Query: 58 IKLQIWD----TAGQERFHTITTSYYR---GAMGIMLVYDIT---NGKSFENISKWLRNI 107 + D G + + + R I+ V D++ +++ + + Sbjct: 207 -SFVMADLPGLIEGAHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQEL 265 Query: 108 DEH--ANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREH--GIRFFETSAKANINIEKAF 163 E+ + ++++ NK DM + E + F SA + + Sbjct: 266 SEYNLRLTERPQIIVANKMDMPE----AAENLEAFKEKLTDDYPVFPISAVTREGLRELL 321 Query: 164 LTLAEDILRKTPVKEPNSENV 184 +A + + E + Sbjct: 322 FEVANQLENTPEFPLYDEEEL 342 >2GTP-A nrPDB Length = 323 Score = 44.8 bits (105), Expect = 3e-05, Method: Composition-based stats. Identities = 24/185 (12%), Positives = 51/185 (27%), Gaps = 52/185 (28%) Query: 36 TTFISTIGIDFKIKTVELQG--------KKIKLQIWDTAGQERFHTITTSYYRGAMGIML 87 +I T D V+ G K + +++D GQ + G I+ Sbjct: 134 PNYIPTQ-QDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIF 192 Query: 88 VYDITN----------GKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDDKRVV---- 132 +++ K +I + D +L NK D+ ++++ Sbjct: 193 CVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPL 252 Query: 133 -----------PKGKGEQIAREHGIRF--------------FETSAKANINIEKAFLTLA 167 + +F T A N++ F + Sbjct: 253 TICYPEYAGSNTYEEAAAY---IQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVT 309 Query: 168 EDILR 172 + I++ Sbjct: 310 DVIIK 314 Score = 28.2 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 12/18 (66%) Query: 11 KLLLIGDSGVGKTCVLFR 28 KLLL+G GK+ ++ + Sbjct: 4 KLLLLGAGESGKSTIVKQ 21 >3IZY-P nrPDB Length = 537 Score = 44.4 bits (104), Expect = 3e-05, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 50/144 (34%), Gaps = 11/144 (7%) Query: 21 GKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYR 80 GKT +L + I V L + K+ DT G F + + Sbjct: 16 GKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLPSGE-KITFLDTPGHAAFSAMRARGTQ 74 Query: 81 GAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK--RVVPKGKG- 137 ++LV +G + + + +I + V +L NKCD + V K Sbjct: 75 VTDIVILVVAADDG----VMKQTVESIQHAKDAHVPIVLAINKCDKAEADPEKVKKELLA 130 Query: 138 -EQIAREHG--IRFFETSAKANIN 158 + + ++G ++ SA N Sbjct: 131 YDVVCEDYGGDVQAVHVSALTGEN 154 >3IEU-A nrPDB Length = 301 Score = 44.0 bits (103), Expect = 4e-05, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 56/174 (32%), Gaps = 25/174 (14%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ--E 69 + ++G VGK+ +L + + T +I + +G + + DT G E Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYV-DTPGLHME 69 Query: 70 RFHTITTS-------YYRGAMGIMLVYDITNGKSFENISKWLRN----IDEHANEDVERM 118 I ++ V + T +W + +++ + Sbjct: 70 EKRAINRLMNKAASSSIGDVELVIFVVEGT---------RWTPDDEMVLNKLREGKAPVI 120 Query: 119 LLGNKCDMDDKRVVPKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 171 L NK D ++ + +A + SA+ +N++ + L Sbjct: 121 LAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTI-AAIVRKHL 173 >2QTH-A nrPDB Length = 364 Score = 44.0 bits (103), Expect = 4e-05, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 60/165 (36%), Gaps = 20/165 (12%) Query: 14 LIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER--- 70 ++G + GKT + + + + K + K+ + DT G R Sbjct: 184 IVGYTNSGKTSLFNSLTGLT--QKVDTKLFTTMSPKRYAIPINNRKIMLVDTVGFIRGIP 241 Query: 71 -------FHTITTSYYRGAMGIMLVYDITNGKS--FENISKWLRNIDEHANEDVERMLLG 121 F T++ + Y + ++LV D T ++ E + + E ++ Sbjct: 242 PQIVDAFFVTLSEAKY--SDALILVIDSTFSENLLIETLQSSFEILREIGVSGKPILVTL 299 Query: 122 NKCDMDDKRVVPK-GKGEQIAREHGIRFFE---TSAKANINIEKA 162 NK D + + K E++++E F+ SA N+E Sbjct: 300 NKIDKINGDLYKKLDLVEKLSKELYSPIFDVIPISALKRTNLELL 344 >3A1W-A nrPDB Length = 168 Score = 43.6 bits (102), Expect = 5e-05, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 53/169 (31%), Gaps = 17/169 (10%) Query: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67 + K+ L G VGKT + + + ++ K +G I L D G Sbjct: 4 HMVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKGYTINLI--DLPG 61 Query: 68 QERFH------TITTSYYRGAMG--IMLVYDITNGKSFENISKWLRNIDEHANEDVERML 119 I Y ++LV D N E L I E + +L Sbjct: 62 TYSLGYSSIDEKIARDYLLKGDADLVILVADSVNP---EQSLYLLLEILEMEKK---VIL 115 Query: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAE 168 D K + + ++ + GI TS+ +E+ + E Sbjct: 116 AMTAIDEAKKTGMKIDR-YELQKHLGIPVVFTSSVTGEGLEELKEKIVE 163 >4DCU-A nrPDB Length = 456 Score = 43.3 bits (101), Expect = 7e-05, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 59/198 (29%), Gaps = 24/198 (12%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE-- 69 + ++G VGK+ + R + + + T G+ + + DT G + Sbjct: 26 VAIVGRPNVGKSTIFNRIAGERISIVED-TPGVTRDRIYSSAEWLNYDFNLIDTGGIDIG 84 Query: 70 ------RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 + A I+ + + + + + I + +L NK Sbjct: 85 DEPFLAQIRQQAEIAMDEADVIIFM--VNGREGVTAADEEVAKILYRTKK--PVVLAVNK 140 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFE---TSAKANINIEKAFLTLAEDILRKTPVKEPN 180 D + R I + + F E S + + L + + P + N Sbjct: 141 LDNTEMRA-------NIYDFYSLGFGEPYPISGTHGLGLGDL-LDAVAEHFKNIPETKYN 192 Query: 181 SENVDISSGGGVTGWKSK 198 E + G KS Sbjct: 193 EEVIQFCLIGRPNVGKSS 210 Score = 35.2 bits (80), Expect = 0.020, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 73/213 (34%), Gaps = 31/213 (14%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDA--FNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 + + LIG VGK+ ++ + + T + ++ I DTA Sbjct: 195 VIQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDT-SFTYNQQE--FVIVDTA 251 Query: 67 G----------QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANE-DV 115 G E++ + ++ V + +G+ E I + + I +A+E Sbjct: 252 GMRKKGKVYETTEKYSVLRALKAIDRSEVVAV--VLDGE--EGIIEQDKRIAGYAHEAGK 307 Query: 116 ERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFE------TSAKANINIEKAFLTLA-- 167 +++ NK D DK + E+ R+H +F + SA I + Sbjct: 308 AVVIVVNKWDAVDKDESTMKEFEENIRDH-FQFLDYAPILFMSALTKKRIHTLMPAIIKA 366 Query: 168 -EDILRKTPVKEPNSENVDISS-GGGVTGWKSK 198 E+ + N +D + T S+ Sbjct: 367 SENHSLRVQTNVLNDVIMDAVAMNPTPTHNGSR 399 >3A1U-A nrPDB Length = 258 Score = 43.3 bits (101), Expect = 7e-05, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 53/169 (31%), Gaps = 17/169 (10%) Query: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67 + K+ L G VGKT + + + ++ K +G I L D G Sbjct: 4 HMVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKGYTINLI--DLPG 61 Query: 68 QERFH------TITTSYYRGAMG--IMLVYDITNGKSFENISKWLRNIDEHANEDVERML 119 I Y ++LV D N E L I E + +L Sbjct: 62 TYSLGYSSIDEKIARDYLLKGDADLVILVADSVNP---EQSLYLLLEILEMEKK---VIL 115 Query: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAE 168 D K + + ++ + GI TS+ +E+ + E Sbjct: 116 AMTAIDEAKKTGMKIDR-YELQKHLGIPVVFTSSVTGEGLEELKEKIVE 163 >4QJ3-A nrPDB Length = 379 Score = 43.3 bits (101), Expect = 7e-05, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 60/183 (32%), Gaps = 46/183 (25%) Query: 35 NTTFISTIGIDFKIKT-----VEL--QGKKIKLQIWDTAGQERFHTITTSYYRG-AMGIM 86 + +++ T +++ +E + + ++ D GQ + + Sbjct: 189 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 248 Query: 87 LV----YD-----ITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDDKRVV---- 132 LV YD N E R I + ++ +L NK D+ +++++ Sbjct: 249 LVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHL 308 Query: 133 ---------PKGKGEQIAREHGIRFF--------------ETSAKANINIEKAFLTLAED 169 P+ + ARE ++ F T A NI F + + Sbjct: 309 VDYFPEYDGPQRDAQA-AREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDT 367 Query: 170 ILR 172 IL+ Sbjct: 368 ILQ 370 Score = 27.9 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 10 FKLLLIGDSGVGKTCVLFR 28 KLLL+G GK+ + + Sbjct: 60 LKLLLLGTGESGKSTFIKQ 78 >5VAI-A nrPDB Length = 380 Score = 43.3 bits (101), Expect = 7e-05, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 15/102 (14%) Query: 41 TIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITN------- 93 T GI F+ K ++ K+ ++D GQ + I+ V ++ Sbjct: 190 TSGI-FETK-FQVD--KVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIRE 245 Query: 94 ---GKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDDKRV 131 + ++I + + +L NK D+ ++V Sbjct: 246 DNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKV 287 Score = 28.2 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 15/26 (57%) Query: 3 KKTYDLLFKLLLIGDSGVGKTCVLFR 28 K+ Y +LLL+G GK+ ++ + Sbjct: 34 KQVYRATHRLLLLGAGESGKSTIVKQ 59 >2BCJ-Q nrPDB Length = 353 Score = 43.3 bits (101), Expect = 8e-05, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 60/183 (32%), Gaps = 46/183 (25%) Query: 35 NTTFISTIGIDFKIKT-----VEL--QGKKIKLQIWDTAGQERFHTITTSYYRG-AMGIM 86 + +++ T +++ +E + + ++ D GQ + + Sbjct: 163 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 222 Query: 87 LV----YD-----ITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDDKRVV---- 132 LV YD N E R I + ++ +L NK D+ +++++ Sbjct: 223 LVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHL 282 Query: 133 ---------PKGKGEQIAREHGIRFF--------------ETSAKANINIEKAFLTLAED 169 P+ + ARE ++ F T A NI F + + Sbjct: 283 VDYFPEYDGPQRDAQA-AREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDT 341 Query: 170 ILR 172 IL+ Sbjct: 342 ILQ 344 Score = 27.9 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 10 FKLLLIGDSGVGKTCVLFR 28 KLLL+G GK+ + + Sbjct: 34 LKLLLLGTGESGKSTFIKQ 52 >4NCL-A nrPDB Length = 457 Score = 42.9 bits (100), Expect = 8e-05, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 46/133 (34%), Gaps = 26/133 (19%) Query: 12 LLLIGDSGVGKTCVLFRF----SDDAFNTTFISTIGIDF--------KIKTVELQGK-KI 58 ++G GKT +L + + IG + K V GK + Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 59 K---LQIWDTAGQERFHTITTSYYRGAMGIMLVYDIT---NGKSFENISKWLRNIDEHAN 112 K L I DT G E F + + +LV DI ++ E+ LR + E Sbjct: 73 KVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIES----LRLLRER-- 126 Query: 113 EDVERMLLGNKCD 125 ++ NK D Sbjct: 127 -KTPFVVALNKID 138 >4N3G-A nrPDB Length = 603 Score = 42.9 bits (100), Expect = 8e-05, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 46/133 (34%), Gaps = 26/133 (19%) Query: 12 LLLIGDSGVGKTCVLFRF----SDDAFNTTFISTIGIDF--------KIKTVELQGK-KI 58 ++G GKT +L + + IG + K V GK + Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 59 K---LQIWDTAGQERFHTITTSYYRGAMGIMLVYDIT---NGKSFENISKWLRNIDEHAN 112 K L I DT G E F + + +LV DI ++ E+ LR + E Sbjct: 73 KVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIES----LRLLRER-- 126 Query: 113 EDVERMLLGNKCD 125 ++ NK D Sbjct: 127 -KTPFVVALNKID 138 >1ZO1-I nrPDB Length = 501 Score = 42.9 bits (100), Expect = 8e-05, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 57/178 (32%), Gaps = 22/178 (12%) Query: 21 GKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYR 80 GKT +L + I VE + I DT G F ++ + Sbjct: 16 GKTSLLEYIRSTKVASGEAGGITQHIGAYHVETENGMITF--LDTPGHAAFTSMRARGAQ 73 Query: 81 GAMGIMLVYDITN---GKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRV--VPKG 135 ++LV + ++ E I NK D + V Sbjct: 74 ATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAV-------NKIDKPEADPDRVKNE 126 Query: 136 KGEQ--IAREHG--IRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISSG 189 + + E G +F SAKA I++ L + IL + V E + ++SG Sbjct: 127 LSQYGILPEEWGGESQFVHVSAKAGTGIDE----LLDAILLQAEVLELKAVRKGMASG 180 >5YT0-A nrPDB Length = 364 Score = 42.9 bits (100), Expect = 8e-05, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 58/182 (31%), Gaps = 36/182 (19%) Query: 12 LLLIGDSGVGKTCVLFRF--------SDDAFNTTFISTI-GIDFKIKTVELQGK--KIKL 60 ++++G GKT +L + ++I D K E K +KL Sbjct: 19 VVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKL 78 Query: 61 QI-----WDTAGQERFHTITTSYYRGAMGIMLVYDIT---NGKSFENISKWLRNIDEHAN 112 I DT G E F + A +LV DI +++E L + E Sbjct: 79 VIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEA----LELLKERR- 133 Query: 113 EDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 V ++ NK D F ET + + + + +I+ Sbjct: 134 --VPFLIAANKIDRIP----------GWKPNPDAPFIETIRRQDPKVREILEQRVYEIVG 181 Query: 173 KT 174 K Sbjct: 182 KM 183 >5FG3-A nrPDB Length = 623 Score = 42.9 bits (100), Expect = 8e-05, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 58/182 (31%), Gaps = 36/182 (19%) Query: 12 LLLIGDSGVGKTCVLFRF--------SDDAFNTTFISTI-GIDFKIKTVELQGK--KIKL 60 ++++G GKT +L + ++I D K E K +KL Sbjct: 19 VVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKL 78 Query: 61 QI-----WDTAGQERFHTITTSYYRGAMGIMLVYDIT---NGKSFENISKWLRNIDEHAN 112 I DT G E F + A +LV DI +++E L + E Sbjct: 79 VIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEA----LELLKERR- 133 Query: 113 EDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 V ++ NK D F ET + + + + +I+ Sbjct: 134 --VPFLIAANKIDRIP----------GWKPNPDAPFIETIRRQDPKVREILEQRVYEIVG 181 Query: 173 KT 174 K Sbjct: 182 KM 183 >4TN1-B nrPDB Length = 345 Score = 42.9 bits (100), Expect = 1e-04, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 46/133 (34%), Gaps = 26/133 (19%) Query: 12 LLLIGDSGVGKTCVLFRF----SDDAFNTTFISTIGIDF--------KIKTVELQGK-KI 58 ++G GKT +L + + IG + K V GK + Sbjct: 13 CCILGHVRTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 59 K---LQIWDTAGQERFHTITTSYYRGAMGIMLVYDIT---NGKSFENISKWLRNIDEHAN 112 K L I DT G E F + + +LV DI ++ E+ LR + E Sbjct: 73 KVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIES----LRLLRER-- 126 Query: 113 EDVERMLLGNKCD 125 ++ NK D Sbjct: 127 -KTPFVVALNKID 138 >3FTQ-A nrPDB Length = 274 Score = 42.9 bits (100), Expect = 1e-04, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 9/69 (13%) Query: 8 LLFKLLLIGDSGVGKTCVLFR-FSDDAFNTTFIS--------TIGIDFKIKTVELQGKKI 58 F L+++G+SG+GK+ ++ F D + I T+ I+ +E +G K+ Sbjct: 4 FEFTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKL 63 Query: 59 KLQIWDTAG 67 +L + DT G Sbjct: 64 RLTVVDTPG 72 >4CSU-9 nrPDB Length = 390 Score = 42.5 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 44/100 (44%), Gaps = 7/100 (7%) Query: 90 DITNGKSFENISKWLRNIDEHANE--DVERMLLGNKCDMDDKRVVPKGKGEQIAREHGI- 146 D T+ EN + +++++ + R L+ NK D+ DK + K + IA G Sbjct: 251 DGTDP--VENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVE-AEEKAKAIAEALGWE 307 Query: 147 -RFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVD 185 +++ SA + + ++ + I+ V+ ++ + Sbjct: 308 DKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPE 347 >4KJZ-A nrPDB Length = 473 Score = 42.5 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 63/178 (35%), Gaps = 14/178 (7%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERF 71 ++++G GKT +L GI + E++ + + DT G E F Sbjct: 75 VVIMGHVDHGKTTLLDYLRKSRIAEKEAG--GITQHVGAFEVKTPQGTVVFIDTPGHEAF 132 Query: 72 HTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG-NKCDMD--D 128 TI + A ++V +G I HA +++ NK D+ D Sbjct: 133 TTIRQRGAKVADIAVIVIAADDG-----IMPQTEEAIAHAKAAGAKLIFAINKIDLPQAD 187 Query: 129 KRVVPKGKGEQ--IAREHG--IRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182 V + E+ + E+G SAK ++ + + +PN+E Sbjct: 188 PEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMILLLAELEDYRADPNAE 245 >4B44-A nrPDB Length = 363 Score = 42.5 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 63/178 (35%), Gaps = 14/178 (7%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERF 71 ++++G GKT +L GI + E++ + + DT G E F Sbjct: 76 VVIMGHVDHGKTTLLDYLRKSRIAEKEAG--GITQHVGAFEVKTPQGTVVFIDTPGHEAF 133 Query: 72 HTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG-NKCDMD--D 128 TI + A ++V +G I HA +++ NK D+ D Sbjct: 134 TTIRQRGAKVADIAVIVIAADDG-----IMPQTEEAIAHAKAAGAKLIFAINKIDLPQAD 188 Query: 129 KRVVPKGKGEQ--IAREHG--IRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182 V + E+ + E+G SAK ++ + + +PN+E Sbjct: 189 PEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMILLLAELEDYRADPNAE 246 >3JCN-b nrPDB Length = 890 Score = 42.5 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 57/178 (32%), Gaps = 22/178 (12%) Query: 21 GKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYR 80 GKT +L + I VE + I DT G F ++ + Sbjct: 403 GKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITF--LDTPGHAAFTSMRARGAQ 460 Query: 81 GAMGIMLVYDITN---GKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRV--VPKG 135 ++LV + ++ E I NK D + V Sbjct: 461 ATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAV-------NKIDKPEADPDRVKNE 513 Query: 136 KGEQ--IAREHG--IRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISSG 189 + + E G +F SAKA I++ L + IL + V E + ++SG Sbjct: 514 LSQYGILPEEWGGESQFVHVSAKAGTGIDE----LLDAILLQAEVLELKAVRKGMASG 567 >2QAG-A nrPDB Length = 361 Score = 42.5 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 9/69 (13%) Query: 8 LLFKLLLIGDSGVGKTCVLFR-FSDDAFNTTFIS--------TIGIDFKIKTVELQGKKI 58 F L+++G+SG+GK+ ++ F D + I T+ I+ +E +G K+ Sbjct: 36 FEFTLMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKL 95 Query: 59 KLQIWDTAG 67 +L + DT G Sbjct: 96 RLTVVDTPG 104 >4ZU9-A nrPDB Length = 582 Score = 42.1 bits (98), Expect = 1e-04, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 53/152 (34%), Gaps = 16/152 (10%) Query: 21 GKTCVLFRFS---DDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTS 77 GKT ++ + D + ID ++ +L+I D G ERF + Sbjct: 15 GKTTLIKTLTGIDTDRLPEEKKRGLSIDIGFAYIDFPDINTRLEIIDVPGHERFIKNAIA 74 Query: 78 YYRGAMGIMLVYDITN---GKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRV--V 132 A G++LV D ++ E+ LR + +L K D D+ + + Sbjct: 75 GICSASGLILVVDPNEGIMPQTIEH----LRVAKSFGIKHGIAVL--TKMDKVDEELAHI 128 Query: 133 PKGKGEQI--AREHGIRFFETSAKANINIEKA 162 + + E + + SA IE Sbjct: 129 AEEELIAFLEKEEMNMEIVKVSAVTGQGIEDL 160 >5X4B-A nrPDB Length = 162 Score = 42.1 bits (98), Expect = 1e-04, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 40/127 (31%), Gaps = 13/127 (10%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE-- 69 + ++G VGK+ + R + + + T G+ + + DT G + Sbjct: 5 VAIVGRPNVGKSTIFNRIAGERISIVED-TPGVTRDRIYSSAEWLNYDFNLIDTGGIDIG 63 Query: 70 ------RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 + A I+ + + + + + I + +L NK Sbjct: 64 DEPFLAQIRQQAEIAMDEADVIIFM--VNGREGVTAADEEVAKILYRTKK--PVVLAVNK 119 Query: 124 CDMDDKR 130 D + R Sbjct: 120 LDNTEMR 126 >3J4J-A nrPDB Length = 569 Score = 42.1 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 63/178 (35%), Gaps = 14/178 (7%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERF 71 ++++G GKT +L GI + E++ + + DT G E F Sbjct: 76 VVIMGHVDHGKTTLLDYLRKSRIAEKEAG--GITQHVGAFEVKTPQGTVVFIDTPGHEAF 133 Query: 72 HTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG-NKCDMD--D 128 TI + A ++V +G I HA +++ NK D+ D Sbjct: 134 TTIRQRGAKVADIAVIVIAADDG-----IMPQTEEAIAHAKAAGAKLIFAINKIDLPQAD 188 Query: 129 KRVVPKGKGEQ--IAREHG--IRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182 V + E+ + E+G SAK ++ + + +PN+E Sbjct: 189 PEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMILLLAELEDYRADPNAE 246 >2WJG-A nrPDB Length = 188 Score = 41.7 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 58/158 (36%), Gaps = 11/158 (6%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +++ LIG+ VGK+ + + + + ++ K E G+ K ++ D G Sbjct: 8 YEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGE--KFKVVDLPGVY 65 Query: 70 RFHTITTSYYRGAMGIM-----LVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKC 124 + I+ LV +I + + E + E +L NK Sbjct: 66 SLTANSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQLMEMGAN---LLLALNKM 122 Query: 125 DMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKA 162 D+ + +++ + G++ SA + IE+ Sbjct: 123 DLAKSLGIEID-VDKLEKILGVKVVPLSAAKKMGIEEL 159 >2WJI-A nrPDB Length = 165 Score = 41.3 bits (96), Expect = 2e-04, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 58/158 (36%), Gaps = 11/158 (6%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +++ LIG+ VGK+ + + + + ++ K E G+ K ++ D G Sbjct: 4 YEIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGE--KFKVVDLPGVY 61 Query: 70 RFHTITTSYYRGAMGIM-----LVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKC 124 + I+ LV +I + + E + E +L NK Sbjct: 62 SLTANSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQLMEMGAN---LLLALNKM 118 Query: 125 DMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKA 162 D+ + +++ + G++ SA + IE+ Sbjct: 119 DLAKSLGIEID-VDKLEKILGVKVVPLSAAKKMGIEEL 155 >1SHZ-A nrPDB Length = 340 Score = 41.3 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 19/157 (12%), Positives = 44/157 (28%), Gaps = 43/157 (27%) Query: 56 KKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGK----------SFENISKWLR 105 K + +++D GQ + G I+ +++ K Sbjct: 178 KDLHFKMFDVGGQRSERKKWFECFEGVTAIIFCVALSDYDQVLMEDRQTNRMHESMKLFD 237 Query: 106 NIDEHAN-EDVERMLLGNKCDMDDKRVV---------------PKGKGEQIAREHGIRF- 148 +I + D +L NK D+ ++++ + +F Sbjct: 238 SICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAY---IQCQFE 294 Query: 149 -------------FETSAKANINIEKAFLTLAEDILR 172 T A N++ F + + I++ Sbjct: 295 DLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIK 331 Score = 30.9 bits (69), Expect = 0.39, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 9/60 (15%) Query: 11 KLLLIGDSGVGKTCVL--FRFSDDA-FN----TTFISTIGIDF-KIKTVELQGKKIKLQI 62 KLLL+G GK+ L R F+ F TI + K V + ++ KL I Sbjct: 14 KLLLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDARE-KLHI 72 >4V7F-o nrPDB Length = 647 Score = 41.0 bits (95), Expect = 3e-04, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 63/189 (33%), Gaps = 23/189 (12%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVEL---QGKKIKLQIWDTAG- 67 LL+ G VGK+ L + + F K++ + K ++ Q DT G Sbjct: 170 LLICGYPNVGKSSFLRCITKSDVD-----VQPYAFTTKSLYVGHFDYKYLRFQAIDTPGI 224 Query: 68 ----QERFHTITTSYYRG----AMGIMLVYDITNGKSF--ENISKWLRNIDEHANEDVER 117 E + I ++ D++ F E K +I Sbjct: 225 LDRPTEEMNNIEMQSIYAIAHLRSCVLYFMDLSEQCGFTIEAQVKLFHSIKPLFANKSVM 284 Query: 118 MLLGNKCDMDDKRVVPKGKGEQI---AREHGIRFFETSAKANINIEKAFLTLAEDILRKT 174 +++ NK D+ + + + + + G+ +S + N+ + E +L Sbjct: 285 VVI-NKTDIIRPEDLDEERAQLLESVKEVPGVEIMTSSCQLEENVMEVRNKACEKLLASR 343 Query: 175 PVKEPNSEN 183 + S++ Sbjct: 344 IENKLKSQS 352 >6OIJ-A nrPDB Length = 353 Score = 41.0 bits (95), Expect = 3e-04, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 57/180 (31%), Gaps = 46/180 (25%) Query: 38 FISTIGIDFKIKT-----VEL--QGKKIKLQIWDTAGQERFHTITTSYYRG-AMGIMLV- 88 ++ T +++ +E + I ++ D GQ + + LV Sbjct: 166 YLPTQQDVLRVRVPTTGIIEYPFDLENIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVA 225 Query: 89 ---YD-----ITNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDDKRVV------- 132 YD N E R I + ++ +L NK D+ + +++ Sbjct: 226 LSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEDKILYSHLVDY 285 Query: 133 ------PKGKGEQIAREHGIRFF--------------ETSAKANINIEKAFLTLAEDILR 172 P+ + ARE ++ F T A NI F + + IL+ Sbjct: 286 FPEFDGPQRDAQA-AREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQ 344 Score = 27.9 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 10 FKLLLIGDSGVGKTCVLFR 28 KLLL+G GK+ + + Sbjct: 34 LKLLLLGTGESGKSTFIKQ 52 >2ODE-A nrPDB Length = 350 Score = 41.0 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 19/189 (10%), Positives = 49/189 (25%), Gaps = 50/189 (26%) Query: 36 TTFISTIGIDFKIKTVELQGKKIKLQ-------IWDTAGQERFHTITTSYYRGAMGIMLV 88 + +I T + + + ++D GQ + G I+ Sbjct: 164 SNYIPTQQDVLRTRVKTTGIVETHFTFKDLYFKMFDVGGQRSERKKWIHCFEGVTAIIFC 223 Query: 89 YDITN----------GKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDDKRVV----- 132 +++ K +I + + +L NK D+ ++++ Sbjct: 224 VALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTETSIILFLNKKDLFEEKIKRSPLT 283 Query: 133 ----------PKGKGEQIAREHGIRF--------------FETSAKANINIEKAFLTLAE 168 + +F T A N++ F + + Sbjct: 284 ICYPEYTGSNTYEEAAAY---IQCQFEDLNRRKDTKEIYTHFTCATDTKNVQFVFDAVTD 340 Query: 169 DILRKTPVK 177 I++ + Sbjct: 341 VIIKNNLKE 349 Score = 28.2 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 9/45 (20%), Positives = 20/45 (44%), Gaps = 3/45 (6%) Query: 11 KLLLIGDSGVGKTCVLFRFS---DDAFNTTFISTIGIDFKIKTVE 52 KLLL+G GK+ ++ + +D ++ + T++ Sbjct: 34 KLLLLGAGESGKSTIVKQMKIIHEDGYSEDECKQYKVVVYSNTIQ 78 >3PR1-A nrPDB Length = 195 Score = 41.0 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 70/194 (36%), Gaps = 37/194 (19%) Query: 2 AKKTYDLLFK--LLLIGDSGVGKTCVLFRFSDDA--FNTTFISTIGIDFKIKTVELQGKK 57 Y K + +G S VGK+ +L + F + T G K +++ Sbjct: 14 TPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNRKIAFVSK---TPG---KTRSINFYLVN 67 Query: 58 IKLQIWDTAG--------QER--FHTITTSYYRGA----MGIMLVYD--ITNGKSFENIS 101 K D G +ER + + Y++ M +LV D I S + Sbjct: 68 SKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLV-DGRIPPQDSDLMMV 126 Query: 102 KWLRNIDEHANEDVERMLLGNKCDMDD--KRVVPKGKGEQIAREHG-IRFFETSAKANIN 158 +W++++ ++ ++ K D +R + ++ ++G TS+ Sbjct: 127 EWMKSL------NIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKYGEYTIIPTSSVTGEG 180 Query: 159 IEKAFLTLAEDILR 172 I + L L +L+ Sbjct: 181 ISEL-LDLISTLLK 193 >4FID-A nrPDB Length = 340 Score = 41.0 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 39/114 (34%), Gaps = 20/114 (17%) Query: 36 TTFISTIGIDFKIKTVELQ-------GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLV 88 ++ T +T K I + D GQ S++ + V Sbjct: 132 EDYVPTEEDLIHNRTKTTGIHEYDFVVKDIPFHLIDVGGQRSERKKWVSFFSDVDCAIFV 191 Query: 89 -----YDI-------TNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKR 130 YD+ T+ + E+I+ + + + +++ NK D+ +++ Sbjct: 192 TSLAEYDMKLYEDGNTSRLT-ESIAVFKDIMTNEFLKGAVKLIFLNKMDLFEEK 244 Score = 30.6 bits (68), Expect = 0.51, Method: Composition-based stats. Identities = 6/33 (18%), Positives = 13/33 (39%), Gaps = 3/33 (9%) Query: 12 LLLIGDSGVGKTCVLFRFS---DDAFNTTFIST 41 ++L+G GK+ + + F +T Sbjct: 8 VMLLGSGESGKSTIAKQLKILFGGGFPEQERAT 40 >1UDX-A nrPDB Length = 416 Score = 41.0 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 40/179 (22%) Query: 14 LIGDSGVGKTCVLFRFSDDA-------FNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 L+G GK+ +L + F TT +G+ VE+ ++ + + D Sbjct: 162 LVGYPNAGKSSLLAAMTRAHPKIAPYPF-TTLSPNLGV------VEVSEEE-RFTLADIP 213 Query: 67 ------------GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANE- 113 G E I ++ V D + + + + + + + Sbjct: 214 GIIEGASEGKGLGLEFLRHIAR-----TRVLLYVLDAAD-EPLKTLETLRKEVGAYDPAL 267 Query: 114 -DVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANIN---IEKAFLTLAE 168 ++ NK D+ ++ V K + +ARE G+ SA +++A L Sbjct: 268 LRRPSLVALNKVDLLEEEAV-KALADALARE-GLAVLPVSALTGAGLPALKEALHALVR 324 >4V8Y-CP nrPDB Length = 339 Score = 40.2 bits (93), Expect = 6e-04, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 67/195 (34%), Gaps = 46/195 (23%) Query: 12 LLLIGDSGVGKTCVLFRF------------SDDAFNTTFIS--------TIGIDFKIKTV 51 ++G GKT +L + T+ + +++ +T Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 52 ELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDIT---NGKSFENISKWLRNID 108 ++ G L + DT G E F + + +LV DI ++ E+ I Sbjct: 68 DVPG----LLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIES-------IK 116 Query: 109 EHANEDVERMLLGNKCD-MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167 + ++ NK D + D + +P F ++ AK + +++ F + Sbjct: 117 LLRDRKAPFVVALNKIDRLYDWKAIPNN-----------SFRDSFAKQSRAVQEEFQSRY 165 Query: 168 EDILRKTPVKEPNSE 182 I + + NSE Sbjct: 166 SKIQLELAEQGLNSE 180 >6OIK-A nrPDB Length = 354 Score = 40.2 bits (93), Expect = 7e-04, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 33/109 (30%), Gaps = 20/109 (18%) Query: 37 TFISTIGIDFKIKTVELQG--------KKIKLQIWDTAGQERFHTITTSYYRGAMGIMLV 88 + T D V+ G K + +++D GQ + I+ Sbjct: 167 DYQPT-EQDILRTRVKTTGIVETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFC 225 Query: 89 YDIT-------NGKSFENISKWLRNIDEHANE----DVERMLLGNKCDM 126 ++ ++ + + L D N D +L NK D+ Sbjct: 226 VALSGYDQVLHEDETTNRMHESLMLFDSICNNKFFIDTSIILFLNKKDL 274 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 19/91 (20%) Query: 11 KLLLIGDSGVGKTCVLFRFS-------DDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 KLLL+G GK+ ++ + + + T++ ++ Sbjct: 35 KLLLLGAGESGKSTIVKQMKIIHEDGFSGEDVKQYKPVV----YSNTIQSLAAIVRAM-- 88 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNG 94 DT G E R A M+ D+ + Sbjct: 89 DTLGIEYGDKE-----RKADAKMVC-DVVSR 113 >3T5D-A nrPDB Length = 274 Score = 40.2 bits (93), Expect = 7e-04, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 8/68 (11%) Query: 8 LLFKLLLIGDSGVGKTCVLFR-FSDDAFNTTF-------ISTIGIDFKIKTVELQGKKIK 59 F L+++G+SG+GK+ ++ F D ++ + T+ ++ ++ G ++ Sbjct: 7 FEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLL 66 Query: 60 LQIWDTAG 67 L I DT G Sbjct: 67 LTIVDTPG 74 >4NCF-A nrPDB Length = 457 Score = 39.8 bits (92), Expect = 8e-04, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 67/195 (34%), Gaps = 46/195 (23%) Query: 12 LLLIGDSGVGKTCVLFRF------------SDDAFNTTFIS--------TIGIDFKIKTV 51 ++G GKT +L + T+ + +++ +T Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 72 Query: 52 ELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDIT---NGKSFENISKWLRNID 108 ++ G L + DT G E F + + +LV DI ++ E+ I Sbjct: 73 DVPG----LLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIES-------IK 121 Query: 109 EHANEDVERMLLGNKCD-MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167 + ++ NK D + D + +P F ++ AK + +++ F + Sbjct: 122 LLRDRKAPFVVALNKIDRLYDWKAIPNN-----------SFRDSFAKQSRAVQEEFQSRY 170 Query: 168 EDILRKTPVKEPNSE 182 I + + NSE Sbjct: 171 SKIQLELAEQGLNSE 185 >4UJC-AB nrPDB Length = 627 Score = 39.8 bits (92), Expect = 8e-04, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 58/184 (31%), Gaps = 46/184 (25%) Query: 12 LLLIGDSGVGKTCVLFRF----SDDAFNTTFISTIGI----------------DFKIKTV 51 + ++G GKT +L + D IG +F + V Sbjct: 41 ICVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKNFDRENV 100 Query: 52 ELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDIT---NGKSFENISKWLRNID 108 + G + I DT G E F + +LV DI ++ E+ I+ Sbjct: 101 RIPG----MLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIES-------IN 149 Query: 109 EHANEDVERMLLGNKCD-MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167 ++ ++ NK D + D + P + K N + F A Sbjct: 150 LLKSKKCPFIVALNKIDRLYDWKKSPDSDVAATLK-----------KQKKNTKDEFEERA 198 Query: 168 EDIL 171 + I+ Sbjct: 199 KAII 202 >3WBI-A nrPDB Length = 606 Score = 39.8 bits (92), Expect = 8e-04, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 67/195 (34%), Gaps = 46/195 (23%) Query: 12 LLLIGDSGVGKTCVLFRF------------SDDAFNTTFIS--------TIGIDFKIKTV 51 ++G GKT +L + T+ + +++ +T Sbjct: 12 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 71 Query: 52 ELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDIT---NGKSFENISKWLRNID 108 ++ G L + DT G E F + + +LV DI ++ E+ I Sbjct: 72 DVPG----LLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIES-------IK 120 Query: 109 EHANEDVERMLLGNKCD-MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167 + ++ NK D + D + +P F ++ AK + +++ F + Sbjct: 121 LLRDRKAPFVVALNKIDRLYDWKAIPNN-----------SFRDSFAKQSRAVQEEFQSRY 169 Query: 168 EDILRKTPVKEPNSE 182 I + + NSE Sbjct: 170 SKIQLELAEQGLNSE 184 >4V8Z-CV nrPDB Length = 586 Score = 39.8 bits (92), Expect = 8e-04, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 67/195 (34%), Gaps = 46/195 (23%) Query: 12 LLLIGDSGVGKTCVLFRF------------SDDAFNTTFIS--------TIGIDFKIKTV 51 ++G GKT +L + T+ + +++ +T Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 52 ELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDIT---NGKSFENISKWLRNID 108 ++ G L + DT G E F + + +LV DI ++ E+ I Sbjct: 68 DVPG----LLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIES-------IK 116 Query: 109 EHANEDVERMLLGNKCD-MDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLA 167 + ++ NK D + D + +P F ++ AK + +++ F + Sbjct: 117 LLRDRKAPFVVALNKIDRLYDWKAIPNN-----------SFRDSFAKQSRAVQEEFQSRY 165 Query: 168 EDILRKTPVKEPNSE 182 I + + NSE Sbjct: 166 SKIQLELAEQGLNSE 180 >2QAG-C nrPDB Length = 418 Score = 39.4 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 8/68 (11%) Query: 8 LLFKLLLIGDSGVGKTCVLFR-FSDDAFNTTF-------ISTIGIDFKIKTVELQGKKIK 59 F L+++G+SG+GK+ ++ F D ++ + T+ ++ ++ G ++ Sbjct: 30 FEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLL 89 Query: 60 LQIWDTAG 67 L I DT G Sbjct: 90 LTIVDTPG 97 >1G7S-A nrPDB Length = 594 Score = 39.4 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 48/127 (37%), Gaps = 16/127 (12%) Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFE-NISKWLRNIDEHANEDVERMLLGN 122 DT G E F T+ A +L+ DI + F+ + L + + ++ N Sbjct: 76 DTPGHEAFTTLRKRGGALADLAILIVDIN--EGFKPQTQEALNILRMYR---TPFVVAAN 130 Query: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182 K D V +G F ET +K +I +++ T +++ K + SE Sbjct: 131 KIDRIHGWRV--HEGR--------PFMETFSKQDIQVQQKLDTKVYELVGKLHEEGFESE 180 Query: 183 NVDISSG 189 D + Sbjct: 181 RFDRVTD 187 >1ZCB-A nrPDB Length = 362 Score = 38.6 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 58/173 (33%), Gaps = 48/173 (27%) Query: 40 STIGI---DFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDIT---- 92 T GI DF+IK V ++ D GQ + I+ + + Sbjct: 187 PTKGIHEYDFEIKNVP-------FKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEFDQ 239 Query: 93 ----NGKS---FENISKWLRNIDEHANEDVERMLLGNKCDMDDKR--VVPKG------KG 137 + ++ E+++ + ++ +V +L NK D+ +++ VV +G Sbjct: 240 VLMEDRQTNRLTESLNIFETIVNNRVFSNVSIILFLNKTDLLEEKVQVVSIKDYFLEFEG 299 Query: 138 EQIA-------------------REHGIRFFETSAKANINIEKAFLTLAEDIL 171 + ++ + T+A NI F + + IL Sbjct: 300 DPHCLRDVQKFLVECFRGKRRDQQQRPLYHHFTTAINTENIRLVFRDVKDTIL 352 Score = 32.1 bits (72), Expect = 0.15, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 9/62 (14%) Query: 9 LFKLLLIGDSGVGKTCVL--FRFSDDA-FN----TTFISTIGIDF-KIKTVELQGKKIKL 60 L K+LL+G GK+ L R F+ F TI + K V + ++ KL Sbjct: 33 LVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDARE-KL 91 Query: 61 QI 62 I Sbjct: 92 HI 93 >6D9H-A nrPDB Length = 355 Score = 38.3 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 36/114 (31%), Gaps = 20/114 (17%) Query: 36 TTFISTIGIDFKIKTVELQG--------KKIKLQIWDTAGQERFHTITTSYYRGAMGIML 87 + +I T D V+ G K + +++D Q + G I+ Sbjct: 166 SDYIPTQ-QDVLRTRVKTTGIVETHFTFKDLHFKMFDVGAQRSERKKWIHCFEGVTAIIF 224 Query: 88 V-----YDIT-----NGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDDKR 130 YD+ K +I + D +L NK D+ +++ Sbjct: 225 CVALSAYDLVLAEDEEMNRMHASMKLFDSICNNKWFTDTSIILFLNKKDLFEEK 278 >4WQY-BZ nrPDB Length = 758 Score = 38.3 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 4/83 (4%) Query: 43 GIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK 102 GI K ++ I DT G F R G ++V+D + G ++ + Sbjct: 129 GITITAAVTTCFWKDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETV 188 Query: 103 WLRNIDEHANEDVERMLLGNKCD 125 W + V R+ NK D Sbjct: 189 W----RQAEKYKVPRIAFANKMD 207 >5CYO-A nrPDB Length = 274 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 9/69 (13%) Query: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAF---------NTTFISTIGIDFKIKTVELQGKKI 58 F ++++G SG+GK+ ++ TI I +E +G ++ Sbjct: 3 FEFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRM 62 Query: 59 KLQIWDTAG 67 KL + DT G Sbjct: 63 KLTVIDTPG 71 >5IRR-A nrPDB Length = 308 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 24/87 (27%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSD------DAFNTTFISTIGIDFK------IKTVELQGK 56 KL+++GDSG+GKT ++ + ++ T F+ TV + + Sbjct: 26 YIKLIVVGDSGLGKTTLIKSLISIPGERLQVHDGSYTPT--EQFRRDPESLSSTVSWRDE 83 Query: 57 KIKLQIW-----DTAG----QERFHTI 74 + ++ IW DT G + F + Sbjct: 84 EDRV-IWVYKIQDTPGYGDELDVFRNL 109 >3H2Y-A nrPDB Length = 368 Score = 37.1 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 11/87 (12%) Query: 87 LVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQI----AR 142 LV I + F+ WL + + + +L+GNK D+ K V K + A+ Sbjct: 72 LVVKIVDI--FDFNGSWLPGLHRFVGNN-KVLLVGNKADLIPK-SVKHDKVKHWMRYSAK 127 Query: 143 EHGIR---FFETSAKANINIEKAFLTL 166 + G++ F SA I + + Sbjct: 128 QLGLKPEDVFLISAAKGQGIAELADAI 154 >3EC1-A nrPDB Length = 369 Score = 36.7 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 11/89 (12%) Query: 87 LVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGK----GEQIAR 142 LV +I + F+ ++ + A ++ +L+GNK D+ R V K ++A Sbjct: 74 LVVNIVDI--FDFNGSFIPGLPRFAADN-PILLVGNKADLLP-RSVKYPKLLRWMRRMAE 129 Query: 143 EHGIRFFE---TSAKANINIEKAFLTLAE 168 E G+ + SA I + K + Sbjct: 130 ELGLCPVDVCLVSAAKGIGMAKVMEAINR 158 >3LX8-A nrPDB Length = 272 Score = 36.7 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 58/166 (34%), Gaps = 18/166 (10%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERF 71 + LIG+ GKT + + G+ + K+ ++ K L+I D G Sbjct: 6 IALIGNPNSGKTSLFNLITGHNQRVGNWP--GVTVERKSGLVK-KNKDLEIQDLPGIYSM 62 Query: 72 HTITTS------YY--RGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 + Y + A I+ V D T N+ + L + + + N Sbjct: 63 SPYSPEEKVARDYLLSQRADSILNVVDAT------NLERNLYLTTQLIETGIPVTIALNM 116 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAED 169 D+ D + K ++++ G+ TSA +++ A Sbjct: 117 IDVLDGQG-KKINVDKLSYHLGVPVVATSALKQTGVDQVVKKAAHT 161 >4KV9-A nrPDB Length = 412 Score = 36.3 bits (83), Expect = 0.009, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 10/67 (14%) Query: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAF---NTTFISTIGIDFKIKTVELQGKK----IKL 60 +F +L +G++G+GK+ +L + F +T T D K+K V K+ +KL Sbjct: 40 FVFNILCVGETGIGKSTLLETLFNQKFDFSPSTHDLT---DPKLKAVTYDLKEANVKLKL 96 Query: 61 QIWDTAG 67 + +T G Sbjct: 97 TVVETCG 103 >2XTZ-A nrPDB Length = 354 Score = 35.9 bits (82), Expect = 0.010, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 63/205 (30%), Gaps = 66/205 (32%) Query: 37 TFISTIGIDFKIKT-----VELQGKKI--------KLQIWDTAGQERFHTITTSYYRGAM 83 +I T + VE+Q + +++D GQ + G Sbjct: 149 NYIPTKEDVLYARVRTTGVVEIQFSPVGENKKSGEVYRLFDVGGQRNERRKWIHLFEGVT 208 Query: 84 GIMLVYDIT--NGKSFENISK-----------WLRNIDEHANEDVERMLLGNKCDMDDKR 130 ++ I+ + FE+ K W+ + + E ML NK D+ +K+ Sbjct: 209 AVIFCAAISEYDQTLFEDEQKNRMMETKELFDWV--LKQPCFEKTSFMLFLNKFDIFEKK 266 Query: 131 V--VPKGKGEQIAR-----------EHGIRF------------------------FETSA 153 V VP E EH F + T+A Sbjct: 267 VLDVPLNVCEWFRDYQPVSSGKQEIEHAYEFVKKKFEELYYQNTAPDRVDRVFKIYRTTA 326 Query: 154 KANINIEKAFLTLAEDILRKTPVKE 178 ++K F L ++ LR+ + E Sbjct: 327 LDQKLVKKTF-KLVDETLRRRNLLE 350 Score = 29.8 bits (66), Expect = 0.78, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 21/53 (39%), Gaps = 7/53 (13%) Query: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFR---FSDDAFNT----TFISTIGIDFK 47 A + + KLLL+G GK+ + + F+ +++ I + Sbjct: 2 AMGSGIHIRKLLLLGAGESGKSTIFKQIKLLFQTGFDEGELKSYVPVIHANVY 54 >1PUJ-A nrPDB Length = 282 Score = 35.9 bits (82), Expect = 0.013, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 9/69 (13%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 + L+IG VGK+ ++ R + T GI + V++ + L++ DT G Sbjct: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRP-GITTSQQWVKVGKE---LELLDTPG-- 174 Query: 70 RFHTITTSY 78 + + Sbjct: 175 ---ILWPKF 180 >1ZCA-A nrPDB Length = 359 Score = 35.6 bits (81), Expect = 0.015, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 51/154 (33%), Gaps = 37/154 (24%) Query: 56 KKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDIT--------NGKS---FENISKWL 104 KKI ++ D GQ + G I+ + + + ++ E+++ + Sbjct: 197 KKIPFKMVDVGGQRSQRQKWFQCFDGITSILFMVSSSEYDQVLMEDRRTNRLVESMNIFE 256 Query: 105 RNIDEHANEDVERMLLGNKCDM--DDKRVVPKGKG------------------------E 138 ++ +V +L NK D+ + + V K + Sbjct: 257 TIVNNKLFFNVSIILFLNKMDLLVEKVKSVSIKKHFPDFKGDPHRLEDVQRYLVQCFDRK 316 Query: 139 QIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 + R + T+A NI F + + IL+ Sbjct: 317 RRNRSKPLFHHFTTAIDTENIRFVFHAVKDTILQ 350 Score = 31.3 bits (70), Expect = 0.26, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 7/61 (11%) Query: 9 LFKLLLIGDSGVGKTCVLFR---FSDDAFNT----TFISTIGIDFKIKTVELQGKKIKLQ 61 L K+LL+G GK+ L + F+ F TI + + L + KL Sbjct: 35 LVKILLLGAGESGKSTFLKQMRIIHGREFDQKALLEFRDTIFDNILKGSRVLVDARDKLG 94 Query: 62 I 62 I Sbjct: 95 I 95 >4V89-AW nrPDB Length = 534 Score = 35.6 bits (81), Expect = 0.016, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 4/105 (3%) Query: 43 GIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK 102 GI ++ + + DT G E F T ++V D G + Sbjct: 67 GISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKG----VEDR 122 Query: 103 WLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIR 147 + ++ D + NK D D + + + + G Sbjct: 123 TRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVENELKIGCA 167 >3JB9-B nrPDB Length = 984 Score = 35.6 bits (81), Expect = 0.017, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 4/74 (5%) Query: 52 ELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHA 111 +++GK Q DT G F + + G++LV D+ G R I Sbjct: 204 DMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVVDVIEGVMINTT----RIIKHAI 259 Query: 112 NEDVERMLLGNKCD 125 D+ +L+ NK D Sbjct: 260 LHDMPIVLVLNKVD 273 >1TAG-A nrPDB Length = 324 Score = 35.6 bits (81), Expect = 0.017, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 52/180 (28%), Gaps = 46/180 (25%) Query: 38 FISTIGIDFKIKTVELQG--------KKIKLQIWDTAGQERFHTITTSYYRGAMGIMLV- 88 ++ T D V+ G K + +++D GQ + G I+ + Sbjct: 137 YVPT-EQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTCIIFIA 195 Query: 89 ----YDI-----TNGKSFENISKWLRNIDEHAN-EDVERMLLGNKCDMDDKRVVPKGKGE 138 YD+ +I H +L NK D+ +++ Sbjct: 196 ALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTSIVLFLNKKDVFSEKIKKAHLSI 255 Query: 139 QIAREHG------------IRFFE--------------TSAKANINIEKAFLTLAEDILR 172 +G ++F E T A N++ F + + I++ Sbjct: 256 CFPDYNGPNTYEDAGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVTDIIIK 315 Score = 28.6 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 12/18 (66%) Query: 11 KLLLIGDSGVGKTCVLFR 28 KLLL+G GK+ ++ + Sbjct: 5 KLLLLGAGESGKSTIVKQ 22 >1U0L-A nrPDB Length = 301 Score = 35.2 bits (80), Expect = 0.019, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 8/106 (7%) Query: 68 QERFHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDM 126 R + +T + ++LV + ++ I K+L +++ E V + NK D+ Sbjct: 71 LHRKNLLTKPHVANVDQVILVVTVKMPETSTYIIDKFLVLAEKNELETVMVI---NKMDL 127 Query: 127 DDKRVVPKGKGEQIAREHG--IRFFETSAKANINIEKAFLTLAEDI 170 D+ K ++ + +TSAK + IE+ L I Sbjct: 128 YDED--DLRKVRELEEIYSGLYPIVKTSAKTGMGIEELKEYLKGKI 171 Score = 26.3 bits (57), Expect = 9.9, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 10/14 (71%) Query: 14 LIGDSGVGKTCVLF 27 + G SGVGK+ +L Sbjct: 174 MAGLSGVGKSSLLN 187 >1SUL-A nrPDB Length = 195 Score = 35.2 bits (80), Expect = 0.020, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 43/127 (33%), Gaps = 20/127 (15%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG---- 67 + L G S VGK+ + + T K +T+ +L D G Sbjct: 26 IALAGRSNVGKSSFINSLINRK---NLARTSSKPGKTQTLNFYIINDELHFVDVPGYGFA 82 Query: 68 ------QERFHTITTSYYRGAMGIMLVYDITNGK---SFENISKWLRNIDEHANEDVERM 118 +E + + +Y + V I + + S +++ + ++ + + Sbjct: 83 KVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQ--MYEFLKYYG--IPVI 138 Query: 119 LLGNKCD 125 ++ K D Sbjct: 139 VIATKAD 145 >4Z54-A nrPDB Length = 287 Score = 35.2 bits (80), Expect = 0.022, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 9/67 (13%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAF---------NTTFISTIGIDFKIKTVELQGKKIKL 60 F ++++G SG+GK+ ++ T+ I +E G K+KL Sbjct: 20 FNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKL 79 Query: 61 QIWDTAG 67 + DT G Sbjct: 80 TVIDTPG 86 >5TY0-A nrPDB Length = 422 Score = 34.8 bits (79), Expect = 0.024, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 54/147 (36%), Gaps = 14/147 (9%) Query: 56 KKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDV 115 + ++ I DT G F R G ++V+D G ++ + W R +++ V Sbjct: 81 ESHRINIIDTPGHVDFMIEVERSLRVLDGAVVVFDSVAGVEPQSETVW-RQANKYG---V 136 Query: 116 ERMLLGNKCDMDDK---RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172 R++ NK D RVV + K + ++ I E+ F + + I Sbjct: 137 PRIVFVNKMDRMGANFLRVVSQIKQRLGSTPVVLQ-------LPIGAEEEFKGVIDLIKM 189 Query: 173 KTPVKEPNSENVDISSGGGVTGWKSKC 199 K + ++ + KS C Sbjct: 190 KAIHWDEENKGMTFKYVDIPADLKSTC 216 >6F1T-i nrPDB Length = 492 Score = 34.8 bits (79), Expect = 0.029, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 53/141 (37%), Gaps = 28/141 (19%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV--ELQGKKIKLQIWDTAGQE 69 +L+ G+ G GKT ++ + G+++ +V E + + +W G + Sbjct: 57 ILVFGEDGSGKTTLMTKLQGAEHGKKGR---GLEYLYLSVHDEDRDDHTRCNVWILDG-D 112 Query: 70 RFHTITTSYYRGAM-----GIMLVYDITNGKS-FENISKWLRNIDEHANEDVERMLLGNK 123 +H + A ++ V D++ + E++ KW + EH Sbjct: 113 LYHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHI------------ 160 Query: 124 CDMDDKRVVPKGKGEQIAREH 144 DK +P K ++ R+ Sbjct: 161 ----DKMKIPPEKMRELERKF 177 Score = 30.6 bits (68), Expect = 0.52, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 22/68 (32%), Gaps = 11/68 (16%) Query: 115 VERMLLGNKCD----MDDKRVVPKGKG-------EQIAREHGIRFFETSAKANINIEKAF 163 + +++ KCD ++ + + ++G TS K N++ + Sbjct: 225 IPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLY 284 Query: 164 LTLAEDIL 171 + Sbjct: 285 KYIVHKTY 292 >1NI3-A nrPDB Length = 392 Score = 34.4 bits (78), Expect = 0.029, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 14/85 (16%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K ++G VGK+ F S +G + ++ K+ + D E Sbjct: 21 LKTGIVGMPNVGKSTF--------FRAITKSVLGNPANYPYATIDPEEAKVAVPD----E 68 Query: 70 RFHTITTSYYRGAM--GIMLVYDIT 92 RF + +Y + + V+DI Sbjct: 69 RFDWLCEAYKPKSRVPAFLTVFDIA 93 >3W5J-A nrPDB Length = 204 Score = 34.4 bits (78), Expect = 0.036, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 60/171 (35%), Gaps = 13/171 (7%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL----QIWDTA 66 ++ L+G GK+ + R + A I ++ + L +++ I+D Sbjct: 5 RIALLGMPNTGKSTLFNRMTGGAARVGNWPGITVELLSGKILLGADMVEIIDLPGIYDLH 64 Query: 67 GQERFHTITTSYYRGA--MGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKC 124 G + + +++ + T I + + + + ++ ++L N Sbjct: 65 GFSDDEQVVRHFLHDNVPDLALVILNAT------QIERQMSLLLQLKQLNMNIVVLLNMS 118 Query: 125 DMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175 D + + +++ I F+ S K ++A + + TP Sbjct: 119 DEAKQYGITID-SRKMSELLQIPVFQLSGKYGTGYQEALQAVTRALRYPTP 168 >6F1Y-j nrPDB Length = 337 Score = 34.4 bits (78), Expect = 0.037, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 53/141 (37%), Gaps = 28/141 (19%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV--ELQGKKIKLQIWDTAGQE 69 +L+ G+ G GKT ++ + G+++ +V E + + +W G + Sbjct: 21 ILVFGEDGSGKTTLMTKLQGAEHGKKGR---GLEYLYLSVHDEDRDDHTRCNVWILDG-D 76 Query: 70 RFHTITTSYYRGAM-----GIMLVYDITNGKS-FENISKWLRNIDEHANEDVERMLLGNK 123 +H + A ++ V D++ + E++ KW + EH Sbjct: 77 LYHKGLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHI------------ 124 Query: 124 CDMDDKRVVPKGKGEQIAREH 144 DK +P K ++ R+ Sbjct: 125 ----DKMKIPPEKMRELERKF 141 Score = 30.2 bits (67), Expect = 0.63, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 22/68 (32%), Gaps = 11/68 (16%) Query: 115 VERMLLGNKCD----MDDKRVVPKGKG-------EQIAREHGIRFFETSAKANINIEKAF 163 + +++ KCD ++ + + ++G TS K N++ + Sbjct: 189 IPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIYTSVKEEKNLDLLY 248 Query: 164 LTLAEDIL 171 + Sbjct: 249 KYIVHKTY 256 >6O81-S nrPDB Length = 472 Score = 34.4 bits (78), Expect = 0.037, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 5/59 (8%) Query: 117 RMLLGNKCDMDDKRVVPKGKGEQIA-----REHGIRFFETSAKANINIEKAFLTLAEDI 170 ++L NK D+ + + + +A G SA+ NIE + + I Sbjct: 185 ILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKI 243 >6FEC-S nrPDB Length = 422 Score = 34.4 bits (78), Expect = 0.037, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 5/59 (8%) Query: 117 RMLLGNKCDMDDKRVVPKGKGEQIA-----REHGIRFFETSAKANINIEKAFLTLAEDI 170 ++L NK D+ + + + +A G SA+ NIE + + I Sbjct: 147 ILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKI 205 >5AR1-A nrPDB Length = 303 Score = 34.0 bits (77), Expect = 0.040, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 12/70 (17%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFI----ST-----IGIDFKIKTVELQGKK--- 57 F ++++G SG G++ + T T I + + +TVEL+ + Sbjct: 28 FTVMIVGQSGSGRSTFINTLCGQQVVDTSTTILLPTDTSTEIDLQLREETVELEDDEGVK 87 Query: 58 IKLQIWDTAG 67 I+L I DT G Sbjct: 88 IQLNIIDTPG 97 >5H7K-A nrPDB Length = 397 Score = 34.0 bits (77), Expect = 0.042, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 50/143 (34%), Gaps = 26/143 (18%) Query: 21 GKTCVLFRFSDD---------------AFNTTFISTIGIDFKIKTV----ELQGKKIKLQ 61 GKT + F+ + GI V +GK + Sbjct: 36 GKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQAR-GITINAANVSMVHNYEGKDYLIN 94 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 + DT G F T R G+++V D G + + + + E V+ +L Sbjct: 95 LIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEG----VMPQTETVVRQALREYVKPVLFI 150 Query: 122 NKCD--MDDKRVVPKGKGEQIAR 142 NK D + + ++ P+ E+ ++ Sbjct: 151 NKVDRLIRELKLTPQQMMERFSK 173 >5H7J-A nrPDB Length = 743 Score = 34.0 bits (77), Expect = 0.042, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 50/143 (34%), Gaps = 26/143 (18%) Query: 21 GKTCVLFRFSDD---------------AFNTTFISTIGIDFKIKTV----ELQGKKIKLQ 61 GKT + F+ + GI V +GK + Sbjct: 36 GKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQAR-GITINAANVSMVHNYEGKDYLIN 94 Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 + DT G F T R G+++V D G + + + + E V+ +L Sbjct: 95 LIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEG----VMPQTETVVRQALREYVKPVLFI 150 Query: 122 NKCD--MDDKRVVPKGKGEQIAR 142 NK D + + ++ P+ E+ ++ Sbjct: 151 NKVDRLIRELKLTPQQMMERFSK 173 >4R98-A nrPDB Length = 271 Score = 34.0 bits (77), Expect = 0.047, Method: Composition-based stats. Identities = 21/157 (13%), Positives = 54/157 (34%), Gaps = 17/157 (10%) Query: 14 LIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL-------QIWDTA 66 LIG+ GKT + + + + + ++ K ++ L + + Sbjct: 8 LIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTDHQVTLVDLPGTYSLTTIS 67 Query: 67 GQERFHTITTSYYR---GAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 Q +Y A ++ V D + N+ + L + + ++ N Sbjct: 68 SQTSLDEQIACHYILSGDADLLINVVDAS------NLERNLYLTLQLLELGIPCIVALNM 121 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIE 160 D+ +K+ + + + + ++ G A N++ Sbjct: 122 LDIAEKQNI-RIEIDALSARLGCPVIPLVATDTKNVQ 157 >2YV5-A nrPDB Length = 302 Score = 34.0 bits (77), Expect = 0.049, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Query: 3 KKTYDLL--FKLLLIGDSGVGKTCVLFRFSDDAFNTTFIS 40 + D L F +L G SGVGK+ +L R + + T +S Sbjct: 157 DELVDYLEGFICILAGPSGVGKSSILSRLTGEELRTQEVS 196 >1HEY-A nrPDB Length = 128 Score = 33.6 bits (76), Expect = 0.052, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 7/98 (7%) Query: 6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW-- 63 D K L++G+ G GK+ V + FN + G+D K ++ G + W Sbjct: 1 ADKELKFLVVGNGGTGKSTVRNLLKELGFNNVEDAEDGVDALNK-LQAGGYGFVISDWNM 59 Query: 64 -DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENI 100 + G E TI GAM + V +T ENI Sbjct: 60 PNMDGLELLKTIRA---DGAMSALPVLMVTAEAKKENI 94 >4AC9-A nrPDB Length = 482 Score = 33.6 bits (76), Expect = 0.055, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 50/156 (32%), Gaps = 21/156 (13%) Query: 21 GKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ-----IWDTAGQERFHTIT 75 GKT + ++ A + + T+++ KL+ + D G + Sbjct: 31 GKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKLENYRITLVDAPGHAD---LI 87 Query: 76 TSYYRGAMGI---MLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVV 132 + A I ++V D G + L I +H ++ +++ K D + Sbjct: 88 RAVVSAADIIDLALIVVDAKEGPKTQTGEHML--ILDHF--NIPIIVVITKSDNAGTEEI 143 Query: 133 PKGKG------EQIAREHGIRFFETSAKANINIEKA 162 + + + SAK +++ Sbjct: 144 KRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDEL 179 >1YE8-A nrPDB Length = 178 Score = 33.6 bits (76), Expect = 0.055, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 15/22 (68%) Query: 10 FKLLLIGDSGVGKTCVLFRFSD 31 K+++ G+ GVGKT ++ + + Sbjct: 1 MKIIITGEPGVGKTTLVKKIVE 22 >6CS8-A nrPDB Length = 303 Score = 33.6 bits (76), Expect = 0.058, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 37/141 (26%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTI---GIDFKIKTVELQGKKIKLQIWDTA 66 F +L++G +GVGKT + + + F S + G F+ VE +LQ+W Sbjct: 100 FVILMVGVNGVGKTTTIGKLAR-QFEQQGKSVMLAAGDTFRAAAVE------QLQVW--- 149 Query: 67 GQ-ERFHTITTSYYRGAMGIMLVYD-------------ITNGK-SFENISKWLRNIDEHA 111 GQ I GA +++D I + +N S + + + Sbjct: 150 GQRNNIPVIAQH--TGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKK-- 205 Query: 112 NEDVERMLLGNKCDMDDKRVV 132 + + K D++ V Sbjct: 206 -----IVRVMKKLDVEAPHEV 221 >4U00-A nrPDB Length = 244 Score = 33.6 bits (76), Expect = 0.065, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 11/49 (22%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIK 59 KL++IG SG GK+ ++ + DF+ V + G +K Sbjct: 32 KLVIIGPSGSGKSTLIRTINRLE-----------DFQEGEVVVDGLSVK 69 >4YMS-J nrPDB Length = 240 Score = 33.2 bits (75), Expect = 0.067, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61 +++IG SG GK+ +L N T G F I V++ K+ + Sbjct: 30 VVIIGPSGSGKSTLLR-----CINLLEEPTKGEVF-IDGVKINNGKVNIN 73 >1EFM-A nrPDB Length = 379 Score = 33.2 bits (75), Expect = 0.067, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 36/110 (32%), Gaps = 11/110 (10%) Query: 21 GKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYR 80 GKT + + T + GI VE D G + + Sbjct: 23 GKTTLTAAITTVLAKTYGGAARGITINTSHVEYDTPTRHYAHVDCPGHADY---VKNMIT 79 Query: 81 GA---MGIMLVYDITNGKSFENISKWLRNIDEHANEDVE-RMLLGNKCDM 126 GA G +LV T+G + + +I V ++ NKCDM Sbjct: 80 GAAQMDGAILVVAATDGP----MPQTREHILLGRQVGVPYIIVFLNKCDM 125 >5GAD-l nrPDB Length = 497 Score = 33.2 bits (75), Expect = 0.076, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 37/141 (26%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTI---GIDFKIKTVELQGKKIKLQIWDTA 66 F +L++G +GVGKT + + + F S + G F+ VE +LQ+W Sbjct: 294 FVILMVGVNGVGKTTTIGKLAR-QFEQQGKSVMLAAGDTFRAAAVE------QLQVW--- 343 Query: 67 GQ-ERFHTITTSYYRGAMGIMLVYD-------------ITNGK-SFENISKWLRNIDEHA 111 GQ I GA +++D I + +N S + + + Sbjct: 344 GQRNNIPVIAQH--TGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKK-- 399 Query: 112 NEDVERMLLGNKCDMDDKRVV 132 + + K D++ V Sbjct: 400 -----IVRVMKKLDVEAPHEV 415 >4Z8X-A nrPDB Length = 497 Score = 33.2 bits (75), Expect = 0.081, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 +LL G+ GVGKT + + +A FIS G DF V + +++ +++TA Sbjct: 54 VLLYGEPGVGKTLLAKAIAGEAHVP-FISVSGSDFVEMFVGVGAARVR-DLFETA 106 >2DHR-A nrPDB Length = 499 Score = 32.9 bits (74), Expect = 0.086, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 +LL+G GVGKT + R FI+ G DF V + +++ +++TA Sbjct: 67 VLLVGPPGVGKTHLA-RAVAGEARVPFITASGSDFVEMFVGVGAARVR-DLFETA 119 >1IY1-A nrPDB Length = 254 Score = 32.9 bits (74), Expect = 0.086, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 +LL+G GVGKT + R FI+ G DF V + +++ +++TA Sbjct: 52 VLLVGPPGVGKTHLA-RAVAGEARVPFITASGSDFVEMFVGVGAARVR-DLFETA 104 >1JAL-A nrPDB Length = 363 Score = 32.9 bits (74), Expect = 0.093, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 19/141 (13%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFIS--TIGIDFKIKTVELQGKKIKLQIWDTAG 67 FK ++G VGK+ + + TI + + + +I Sbjct: 3 FKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIV---- 58 Query: 68 QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE--------HANEDVERML 119 + I + LV + G+ N K+L NI E E+ + + Sbjct: 59 --KPERILPTTMEFVDIAGLVAGASKGEGLGN--KFLANIRETDAIGHVVRCFENDDIVH 114 Query: 120 LGNKCD-MDDKRVVPKGKGEQ 139 + K D +DD + Sbjct: 115 VAGKIDPLDDIDTINTELALA 135 >2P8Y-T nrPDB Length = 842 Score = 32.9 bits (74), Expect = 0.095, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 6/102 (5%) Query: 44 IDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW 103 D K + G + + D+ G F + T+ R G ++V D G + Sbjct: 84 EDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEG----VCVQT 139 Query: 104 LRNIDEHANEDVERMLLGNKCD--MDDKRVVPKGKGEQIARE 143 + + E ++ +++ NK D + + +V + + AR Sbjct: 140 ETVLRQALGERIKPVVVINKVDRALLELQVSKEDLYQTFART 181 >5EE0-A nrPDB Length = 395 Score = 32.5 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 21/75 (28%), Gaps = 13/75 (17%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 K+ ++G VGK+ + + ID V + E Sbjct: 26 LKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVPD-------------E 72 Query: 70 RFHTITTSYYRGAMG 84 RF + Y + Sbjct: 73 RFDWLCQLYKPKSEV 87 >2R65-A nrPDB Length = 268 Score = 32.5 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 16/118 (13%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ--- 68 +LL+G G GKT +L + + F S G F V L +++ +++TA + Sbjct: 47 VLLVGPPGTGKT-LLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASRVR-DLFETAKKQAP 104 Query: 69 -----ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121 + I S R A G++ N + + +++ L +D +E+ ++L Sbjct: 105 SIIFIDEIDAIGKS--RAAGGVV----SGNDEREQTLNQLLAEMDGFGSENAPVIVLA 156 >6NOT-A nrPDB Length = 707 Score = 32.5 bits (73), Expect = 0.12, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 51/142 (35%), Gaps = 14/142 (9%) Query: 43 GIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK 102 GI + + + I DT G F R G + V+D G ++ + Sbjct: 68 GITITSAATTCRWQDKVINIIDTPGHVDFTIEVERSLRVLDGAVAVFDGVAGVEPQSETV 127 Query: 103 WLRNIDEHANEDVERMLLGNKCD---MDDKRVVPKGKGEQIAREHGIRFFETSAKANINI 159 W R D++ +V RM NK D D R V K AR I+ I I Sbjct: 128 W-RQADKY---NVPRMCFVNKMDRMGADFYRCVEMIKDRLGARSLIIQ-------LPIGI 176 Query: 160 EKAFLTLAEDILRKTPVKEPNS 181 E+ F + I K + + S Sbjct: 177 EENFKGIVNLIKMKAVIWKDES 198 >6C2V-A nrPDB Length = 115 Score = 32.5 bits (73), Expect = 0.12, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 2/33 (6%) Query: 12 LLLIGDSGVGKTCV--LFRFSDDAFNTTFISTI 42 ++++G SG GKT + L R + + I T+ Sbjct: 5 VVIVGPSGAGKTTLDELARKAKEEVPDAEIRTV 37 Score = 29.4 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 17/38 (44%), Gaps = 1/38 (2%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIK 49 ++++G SG GK+ + + TI + + + Sbjct: 58 VVIVGPSGSGKSTLA-KIVKKIIARAGAKTIEVTTEEE 94 >4TLD-A nrPDB Length = 253 Score = 32.5 bits (73), Expect = 0.13, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 1/54 (1%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 L+ G SG GKT +F + + + F+ ++ WD A Sbjct: 43 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFG-WDLA 95 >5NON-A nrPDB Length = 165 Score = 32.5 bits (73), Expect = 0.14, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 9/46 (19%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGK 56 KL +IGD GVG T + F F + K K + + + Sbjct: 51 KLEIIGDGGVG-TILDMTFVPGEFPHEY--------KEKFILVDNE 87 >3S1A-A nrPDB Length = 525 Score = 32.5 bits (73), Expect = 0.14, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 1/54 (1%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 L+ G SG GKT +F + + + F+ ++ WD A Sbjct: 43 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFG-WDLA 95 >2VNE-A nrPDB Length = 201 Score = 32.5 bits (73), Expect = 0.14, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 9/46 (19%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGK 56 KL +IGD GVG T + F F + K K + + + Sbjct: 67 KLEIIGDGGVG-TILDMTFVPGEFPHEY--------KEKFILVDNE 103 >2IW3-A nrPDB Length = 986 Score = 32.1 bits (72), Expect = 0.15, Method: Composition-based stats. Identities = 7/43 (16%), Positives = 19/43 (44%), Gaps = 5/43 (11%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVEL 53 ++ +IG +G GK+ ++ + + T G + + + Sbjct: 701 RIAVIGPNGAGKSTLINVLTG-----ELLPTSGEVYTHENCRI 738 >2QAG-B nrPDB Length = 427 Score = 32.1 bits (72), Expect = 0.16, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTT--FISTIGIDFKIKTVELQGKKIKLQI 62 F +L +G++G+GK+ ++ + F + G+ + T +LQ ++L++ Sbjct: 41 FCFNILCVGETGLGKSTLMDTLFNTKFEGEPATHTQPGVQLQSNTYDLQESNVRLKL 97 >5A9Z-CA nrPDB Length = 593 Score = 32.1 bits (72), Expect = 0.16, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 35/129 (27%), Gaps = 26/129 (20%) Query: 21 GKTCVLFRFSD--DAFNT------------TFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 GKT ++ + F++ GI K ++ I DT Sbjct: 17 GKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAAIKWDYRINIVDTP 76 Query: 67 GQERFHTITTSYYRGAMGIMLVYDITN----GKSFENISKWLRNIDEHANEDVERMLLGN 122 G F ++LV D + F + + +++ N Sbjct: 77 GHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLK-------PIVVI-N 128 Query: 123 KCDMDDKRV 131 K D R Sbjct: 129 KVDRPGARP 137 >5OCH-A nrPDB Length = 612 Score = 32.1 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 31/79 (39%) Query: 12 LLLIGDSGVGKTC---VLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 + L+G SG GKT +L RF + T G+ V L G+ Sbjct: 394 VALVGQSGGGKTTVASLLERF--------YDPTAGV------VMLDGR------------ 427 Query: 69 ERFHTITTSYYRG-AMGIM 86 T+ S+ RG +G + Sbjct: 428 -DLRTLDPSWLRGQVVGFI 445 >6HZK-A nrPDB Length = 333 Score = 31.7 bits (71), Expect = 0.20, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 3/24 (12%) Query: 11 KLLLIG---DSGVGKTCVLFRFSD 31 +++LIG DSG GK+ L R +D Sbjct: 6 RVVLIGVAGDSGCGKSTFLNRLAD 29 >2OHF-A nrPDB Length = 396 Score = 31.7 bits (71), Expect = 0.21, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 23/74 (31%), Gaps = 15/74 (20%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIK---------- 59 K+ ++G VGK+ ++ + ID V + ++ Sbjct: 23 LKIGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPAS 82 Query: 60 -----LQIWDTAGQ 68 L + D AG Sbjct: 83 KIPAFLNVVDIAGL 96 >2WIC-A nrPDB Length = 267 Score = 31.7 bits (71), Expect = 0.23, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 48/146 (32%), Gaps = 17/146 (11%) Query: 14 LIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL-------QIWDTA 66 LIG+ GKT + + + + + ++ K ++ L + + Sbjct: 8 LIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGIFATTDHQVTLVDLPGTYSLTTIS 67 Query: 67 GQERFHTITTSYYR---GAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 Q +Y A ++ V D + N+ + L + + ++ N Sbjct: 68 SQTSLDEQIACHYILSGDADMLINVVDAS------NLERNLYLTLQLLELGIPCVVALNM 121 Query: 124 CDMDDKRVVPKGKGEQIAREHGIRFF 149 D+ +K+ V + +A G Sbjct: 122 LDIAEKQQVRID-IDALAARLGCPVI 146 >4ZKD-A nrPDB Length = 499 Score = 31.7 bits (71), Expect = 0.24, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 77/240 (32%), Gaps = 64/240 (26%) Query: 12 LLLIGDSGVGKTCVLFRFSDD-------------AFNTTFISTIGIDFKI---------- 48 L +GD+ GK+ +L D ++ + FK+ Sbjct: 22 CLFLGDTNAGKSTLLGHLLYDLNEISMSSMRELQKKSSNLDPSSSNSFKVILDNTKTERE 81 Query: 49 -------KTVELQGKKI----KLQIWDTAGQERF---HTITTSYYRGAMGIMLVYDITNG 94 K ++++ + L + DT G ++ T+ + +LV D N Sbjct: 82 NGFSMFKKVIQVENDLLPPSSTLTLIDTPGSIKYFNKETLNSILTFDPEVYVLVID-CNY 140 Query: 95 KSFEN--------ISKWLRNIDEHANEDVE---RMLLGNKCDM----DDKRVVPKGKGEQ 139 S+E I + L+ I ++L NK D+ + + + + Sbjct: 141 DSWEKSLDGPNNQIYEILKVISYLNKNSACKKHLIILLNKADLISWDKHRLEMIQSELNY 200 Query: 140 IAREH------GIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISSGGGVT 193 + +E+ +F S N+ K E+I + E +S N G T Sbjct: 201 VLKENFQWTDAEFQFIPCSGLLGSNLNK-----TENITKSKYKSEFDSINYVPEWYEGPT 255 >3V70-A nrPDB Length = 247 Score = 31.7 bits (71), Expect = 0.24, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 29/138 (21%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK---IKLQIWDTAG 67 +L+L+G +G GK+ F S +G + ++ +++ DT Sbjct: 23 RLILVGRTGAGKSATGNSILGQR---RFFSRLGATSVTRACTTGSRRWDKCHVEVVDTP- 78 Query: 68 QERFHTI----------TTSYY----RGAMGIMLVYDITNGKSFENI-SKWLRNIDEHAN 112 + F + Y G ++LV T F + +R + + Sbjct: 79 -DIFSSQVSKTDPGCEERGHCYLLSAPGPHALLLV---TQLGRFTAQDQQAVRQVRDMFG 134 Query: 113 EDVE---RMLLGNKCDMD 127 EDV ++ K D+ Sbjct: 135 EDVLKWMVIVFTRKEDLA 152 >5TV2-A nrPDB Length = 405 Score = 31.3 bits (70), Expect = 0.25, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 54/149 (36%), Gaps = 14/149 (9%) Query: 49 KTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNID 108 + +E Q + ++ I DT G F R G ++V+ ++G ++ + W + Sbjct: 73 RGMEAQFQDHRVNIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVEPQSETVWRQADK 132 Query: 109 EHANEDVERMLLGNKCDMDDK---RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLT 165 H V RM+ NK D RVV + K A I+ N+ E+ F Sbjct: 133 YH----VPRMVFVNKMDRAGADFLRVVDQIKNRLGANPVPIQ-------LNVGAEEDFKG 181 Query: 166 LAEDILRKTPVKEPNSENVDISSGGGVTG 194 + + I K + + + Sbjct: 182 VIDLIKMKMINWNEADQGMTFTYEEIPAD 210 >2I3B-A nrPDB Length = 189 Score = 31.3 bits (70), Expect = 0.25, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQI 62 + L G GVGKT ++ + + + ++ + G F + V G++I + Sbjct: 4 VFLTGPPGVGKTTLIHK-ASEVLKSSGVPVDG--FYTEEVRQGGRRIGFDV 51 >3LXX-A nrPDB Length = 239 Score = 31.3 bits (70), Expect = 0.26, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 49/139 (35%), Gaps = 16/139 (11%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 + + +++L+G +G GK+ + + I K + K+ +L + Sbjct: 24 EPRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELVVV 83 Query: 64 DTAG------------QERFHTITTSYYRGAMGIMLVYDITN--GKSFENISKWLRNIDE 109 DT G +E I + G ++LV + + + K L+ E Sbjct: 84 DTPGIFDTEVPNAETSKEIIRCILLTS-PGPHALLLVVPLGRYTEEEHKATEKILKMFGE 142 Query: 110 HANEDVERMLLGNKCDMDD 128 A ++ K D+ D Sbjct: 143 RA-RSFMILIFTRKDDLGD 160 >2IT1-A nrPDB Length = 362 Score = 31.3 bits (70), Expect = 0.26, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIG-IDFKIKTVE 52 + L+G SG GK+ +L+ + + T G I F K V Sbjct: 32 MALLGPSGSGKSTLLYTIAG-----IYKPTSGKIYFDEKDVT 68 >5G06-P nrPDB Length = 747 Score = 31.3 bits (70), Expect = 0.27, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 77/240 (32%), Gaps = 64/240 (26%) Query: 12 LLLIGDSGVGKTCVLFRFSDD-------------AFNTTFISTIGIDFKI---------- 48 L +GD+ GK+ +L D ++ + FK+ Sbjct: 270 CLFLGDTNAGKSTLLGHLLYDLNEISMSSMRELQKKSSNLDPSSSNSFKVILDNTKTERE 329 Query: 49 -------KTVELQGKKI----KLQIWDTAGQERF---HTITTSYYRGAMGIMLVYDITNG 94 K ++++ + L + DT G ++ T+ + +LV D N Sbjct: 330 NGFSMFKKVIQVENDLLPPSSTLTLIDTPGSIKYFNKETLNSILTFDPEVYVLVID-CNY 388 Query: 95 KSFEN--------ISKWLRNIDEHANEDVE---RMLLGNKCDM----DDKRVVPKGKGEQ 139 S+E I + L+ I ++L NK D+ + + + + Sbjct: 389 DSWEKSLDGPNNQIYEILKVISYLNKNSACKKHLIILLNKADLISWDKHRLEMIQSELNY 448 Query: 140 IAREH------GIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISSGGGVT 193 + +E+ +F S N+ K E+I + E +S N G T Sbjct: 449 VLKENFQWTDAEFQFIPCSGLLGSNLNK-----TENITKSKYKSEFDSINYVPEWYEGPT 503 >2YYZ-A nrPDB Length = 359 Score = 31.3 bits (70), Expect = 0.28, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 5/43 (11%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQ 54 + L+G SG GKT L + + T G + + Sbjct: 32 VALLGPSGCGKTTTLLMLAG-----IYKPTSGEIYFDDVLVND 69 >2IYT-A nrPDB Length = 184 Score = 31.3 bits (70), Expect = 0.28, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 7/64 (10%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70 K +L+G G GK+ + R + + + I+ + G+ I I+ T G++ Sbjct: 4 KAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRT------GRSIA-DIFATDGEQE 56 Query: 71 FHTI 74 F I Sbjct: 57 FRRI 60 >4N1A-A nrPDB Length = 589 Score = 30.9 bits (69), Expect = 0.32, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 44/128 (34%), Gaps = 34/128 (26%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTTFIST----IGIDFKIKTVELQGKKIKLQ------- 61 L+ GD+ GK+ +L R + I ID+ +++ + ++ Sbjct: 387 LVFGDTECGKSNLL-RLITAGIIERYTPQQARLIFIDYSRSLLDVATTEHQIGYAASSTA 445 Query: 62 ----IWDTAGQ------------ERFHTITTSYYRGAMGIMLVYD----ITNGKSFENIS 101 + D G E+ + S++ GA ++V D T+ ++ Sbjct: 446 ASSLVRDIKGAMEARLPPPDLTPEQLRS--RSWWTGAELFLVVDDYEMVATSDNPLRPLA 503 Query: 102 KWLRNIDE 109 + L + Sbjct: 504 ELLPQARD 511 >2OUK-A nrPDB Length = 263 Score = 30.9 bits (69), Expect = 0.32, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Query: 12 LLLIGDSGVGKTCVLFRF-SDDAFNTTFISTIGIDFKIKTVELQG 55 +++IG SG GK+ L + F+ I GI+ K K L Sbjct: 53 VVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDTNLNK 97 >1S0U-A nrPDB Length = 408 Score = 30.9 bits (69), Expect = 0.33, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 30/70 (42%), Gaps = 7/70 (10%) Query: 117 RMLLGNKCDMDDKRVVPK--GKGEQIAR---EHGIRFFETSAKANINIEKAFLTLAEDIL 171 +++ NK D+ D++ + + ++ + SA NI+ + + I Sbjct: 138 IIIVQNKIDLVDEKQAEENYEQIKEFVKGTIAENAPIIPISAHHEANIDVLLKAIQDFI- 196 Query: 172 RKTPVKEPNS 181 TP ++P++ Sbjct: 197 -PTPKRDPDA 205 >6G12-A nrPDB Length = 301 Score = 30.9 bits (69), Expect = 0.33, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 30/69 (43%), Gaps = 9/69 (13%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 + +++G VGK+ ++ + + + T G+ + + +++ LQ+ DT G Sbjct: 128 IRAMIVGIPNVGKSTLINKLAKRSIAQTGNKP-GVTKQQQWIKVGNA---LQLLDTPG-- 181 Query: 70 RFHTITTSY 78 + + Sbjct: 182 ---ILWPKF 187 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 3/74 (4%) Query: 105 RNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFL 164 IDE N+ R+++ NK DM + + K + Q + G AK N++K Sbjct: 49 PMIDEVINQK-PRVVILNKKDMSNLNEMSKWE--QFFIDKGYYPVSVDAKHGKNLKKVEA 105 Query: 165 TLAEDILRKTPVKE 178 + K ++ Sbjct: 106 AAIKATAEKFEREK 119 >1IRQ-A nrPDB Length = 71 Score = 30.9 bits (69), Expect = 0.35, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 21/71 (29%) Query: 118 MLLGN---------------KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKA 162 M++GN K D+ + V A H I ET AK N+++ Sbjct: 1 MIVGNLGAQKAKRNDTPISAKKDIMGDKTVRVR-----ADLHHIIKIET-AKNGGNVKEV 54 Query: 163 FLTLAEDILRK 173 E+ +RK Sbjct: 55 MDQALEEYIRK 65 >4FIN-A nrPDB Length = 555 Score = 30.9 bits (69), Expect = 0.37, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 19/39 (48%) Query: 14 LIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVE 52 +IG +G GK+ + S + T+G K+ +V+ Sbjct: 354 IIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVD 392 Score = 28.2 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 12/16 (75%) Query: 11 KLLLIGDSGVGKTCVL 26 K+ ++G +G GK+ +L Sbjct: 34 KIGVLGLNGAGKSTLL 49 >3R7W-B nrPDB Length = 331 Score = 30.9 bits (69), Expect = 0.38, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 76/196 (38%), Gaps = 26/196 (13%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIG-IDFKIKTVELQGKKIKLQIWDTAGQER 70 +LL+G GK+ + + T+ ++E I L + + GQ Sbjct: 2 VLLMGVRRCGKSSICKVVFHNMQPLD---TLYLESTSNPSLEHFSTLIDLAVMELPGQLN 58 Query: 71 FHTITTSY----YRGAMGIMLVYDITNGKSFENISKWLRNIDEHA---NEDVERMLLGNK 123 + SY ++G + VY I + + N L I E+A N + +L +K Sbjct: 59 Y--FEPSYDSERLFKSVGAL-VYVIDSQDEYINAITNLAMIIEYAYKVNPSINIEVLIHK 115 Query: 124 CD-------MDDKRVVPKGKGEQIAR----EHGIRFFETSAKANINIEKAFLTLAEDILR 172 D +D +R + + GE++ + F+ TS +I +AF + + ++ Sbjct: 116 VDGLSEDFKVDAQRDIMQRTGEELLELGLDGVQVSFYLTSIFD-HSIYEAFSRIVQKLIP 174 Query: 173 KTPVKEPNSENVDISS 188 + E +N+ S Sbjct: 175 ELSFLENMLDNLIQHS 190 >5ZLU-EE nrPDB Length = 497 Score = 30.9 bits (69), Expect = 0.38, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 15/91 (16%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDF---------KIKTVELQGKKIKLQ 61 ++ L+GD+G GK+ +L + + DF +I+TVE + +L Sbjct: 32 RIGLVGDNGAGKSSLLKVLNGEIVLAEATLQRFGDFAHISQLGGIEIETVEDRAMLSRLG 91 Query: 62 IW----DT--AGQERFHTITTSYYRGAMGIM 86 + DT G+E I ++ + GI+ Sbjct: 92 VSNVQNDTMSGGEETRAKIAAAFSQQVHGIL 122 Score = 28.6 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 19/40 (47%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKT 50 K+ + G +G GKT +L S+ A T I + +T Sbjct: 324 KVAITGSNGTGKTSLLKMISERADGLTISPKAEIGYFTQT 363 >5KCS-1w nrPDB Length = 639 Score = 30.6 bits (68), Expect = 0.43, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 42/135 (31%), Gaps = 23/135 (17%) Query: 10 FKLLLIGDSG---VGKTCVLFRFSD-----------DAFNTTFISTI-----GIDFKIKT 50 K++ IG GKT + D T +T+ GI + Sbjct: 1 MKIINIGVLAHVDAGKTTLTESLLYNSGAITELGSVDKGTTRTDNTLLERQRGITIQTGI 60 Query: 51 VELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH 110 Q + K+ I DT G F G +L+ I+ + ++ L + Sbjct: 61 TSFQWENTKVNIIDTPGHMDFLAEVYRSLSVLDGAILL--ISAKDGVQAQTRILFHALRK 118 Query: 111 ANEDVERMLLGNKCD 125 + + NK D Sbjct: 119 MG--IPTIFFINKID 131 >4MRS-A nrPDB Length = 614 Score = 30.6 bits (68), Expect = 0.44, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 16/24 (66%), Gaps = 3/24 (12%) Query: 11 KLLLIGDSGVGKTC---VLFRFSD 31 ++ ++G SG GK+ +LFRF D Sbjct: 389 RVAIVGPSGAGKSTIARLLFRFYD 412 >1R6B-X nrPDB Length = 758 Score = 30.6 bits (68), Expect = 0.44, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 4/30 (13%) Query: 13 LLIGDSGVGKTC----VLFRFSDDAFNTTF 38 LL+G+SGVGKT + +R Sbjct: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPEVM 240 >5LZT-jj nrPDB Length = 637 Score = 30.6 bits (68), Expect = 0.45, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 57/197 (28%), Gaps = 49/197 (24%) Query: 12 LLLIGDSGVGKTCVLFRF------SDDAFNTTF------------------ISTIGIDFK 47 ++ IG GK+ + + D + + K Sbjct: 215 VVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDK 274 Query: 48 IKTVEL-----QGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFEN--- 99 KTVE+ + +K I D G + F A +LV FE Sbjct: 275 GKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVIS-ARKGEFETGFE 333 Query: 100 ---ISKWLRNIDEHANEDVERMLLGNKCDMD------------DKRVVPKGKGEQIAREH 144 ++ + + A +L+ NK D +++VP K + Sbjct: 334 KGGQTREHAMLAKTAGVKHLIVLI-NKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKK 392 Query: 145 GIRFFETSAKANINIEK 161 I F S N+++ Sbjct: 393 DIHFMPCSGLTGANLKE 409 >3VAA-A nrPDB Length = 199 Score = 30.6 bits (68), Expect = 0.45, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 10/51 (19%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDD----------AFNTTFISTIGIDFKIK 49 + ++ L G G GKT + F+ F T+G F + Sbjct: 25 MVRIFLTGYMGAGKTTLGKAFARKLNVPFIDLDWYIEERFHKTVGELFTER 75 >6I3O-A nrPDB Length = 677 Score = 30.6 bits (68), Expect = 0.49, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 18/27 (66%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTF 38 L+++G++G GKT + ++ +A T + Sbjct: 31 LIVVGETGSGKTTQVTQYLAEAGFTKY 57 >2P5T-B nrPDB Length = 253 Score = 30.6 bits (68), Expect = 0.51, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 1/39 (2%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKT 50 +LL G SG GKT + R F + G F+ + Sbjct: 35 ILLGGQSGAGKTTI-HRIKQKEFQGNIVIIDGDSFRSQH 72 >6QUZ-B nrPDB Length = 599 Score = 30.6 bits (68), Expect = 0.52, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 3/24 (12%) Query: 11 KLLLIGDSGVGKTC---VLFRFSD 31 K+ L+G +G GKT +L RF D Sbjct: 383 KVALVGPTGSGKTTIVNLLMRFYD 406 >2PJZ-A nrPDB Length = 263 Score = 30.6 bits (68), Expect = 0.52, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 13/16 (81%) Query: 11 KLLLIGDSGVGKTCVL 26 K++++G +G GKT +L Sbjct: 32 KVIILGPNGSGKTTLL 47 >3PXG-A nrPDB Length = 468 Score = 30.2 bits (67), Expect = 0.55, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGK 56 +LIG+ GVGKT + + + I D ++ T+++ K Sbjct: 205 VLIGEPGVGKTAIAEGLAQ-QIINNEVPEILRDKRVMTLDMGTK 247 >3PXI-A nrPDB Length = 758 Score = 30.2 bits (67), Expect = 0.57, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGK 56 +LIG+ GVGKT + + + I D ++ T+++ K Sbjct: 205 VLIGEPGVGKTAIAEGLAQ-QIINNEVPEILRDKRVMTLDMGTK 247 >3FVQ-A nrPDB Length = 359 Score = 30.2 bits (67), Expect = 0.58, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIK 59 ++ ++LF +IG SG GKT +L + + ++ IS G K L ++ + Sbjct: 25 LSLDPGEILF---IIGASGCGKTTLLRCLAGFEQPDSGEISLSGKTIFSKNTNLPVRERR 81 Query: 60 L 60 L Sbjct: 82 L 82 >1Z6G-A nrPDB Length = 218 Score = 30.2 bits (67), Expect = 0.59, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFN 35 + + ++ L++ G SGVGK ++ + + F Sbjct: 18 GSMNNIYPLVICGPSGVGKGTLIKKLL-NEFP 48 >6B8D-A nrPDB Length = 408 Score = 30.2 bits (67), Expect = 0.60, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 50/144 (34%), Gaps = 14/144 (9%) Query: 59 KLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERM 118 ++ + DT G F R G ++VY G ++ + W R +++ V R+ Sbjct: 86 RINVIDTPGHVDFTVEVERSMRVLDGAVMVYCAVGGVQPQSETVW-RQANKYE---VPRI 141 Query: 119 LLGNKCDMDDK---RVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175 NK D RVV + K A ++ + E+ F + + I K Sbjct: 142 AFVNKMDRTGANFLRVVEQLKTRLGANAIPLQ-------LPVGAEENFTGVVDLIKMKAI 194 Query: 176 VKEPNSENVDISSGGGVTGWKSKC 199 + + + ++ C Sbjct: 195 NWNEADQGMTFTYEEVPANMQADC 218 >5C78-A nrPDB Length = 564 Score = 30.2 bits (67), Expect = 0.61, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 12/16 (75%) Query: 11 KLLLIGDSGVGKTCVL 26 K+ IG+SG GK+ ++ Sbjct: 377 KIAFIGESGCGKSTLV 392 >4D61-i nrPDB Length = 426 Score = 30.2 bits (67), Expect = 0.62, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 57/197 (28%), Gaps = 49/197 (24%) Query: 12 LLLIGDSGVGKTCVLFRF------SDDAFNTTF------------------ISTIGIDFK 47 ++ IG GK+ + + D + + K Sbjct: 6 VVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDK 65 Query: 48 IKTVEL-----QGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFEN--- 99 KTVE+ + +K I D G + F A +LV FE Sbjct: 66 GKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVIS-ARKGEFETGFE 124 Query: 100 ---ISKWLRNIDEHANEDVERMLLGNKCDMD------------DKRVVPKGKGEQIAREH 144 ++ + + A +L+ NK D +++VP K + Sbjct: 125 KGGQTREHAMLAKTAGVKHLIVLI-NKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKK 183 Query: 145 GIRFFETSAKANINIEK 161 I F S N+++ Sbjct: 184 DIHFMPCSGLTGANLKE 200 >3ZJC-A nrPDB Length = 305 Score = 30.2 bits (67), Expect = 0.62, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 11/96 (11%) Query: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63 ++ D +++L+G +G GK+ + + I+ + + + + L + Sbjct: 8 ESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQGRDLLVV 67 Query: 64 DTAGQ-----------ERFHTITTSYYRGAMGIMLV 88 DT G + S G I+LV Sbjct: 68 DTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLV 103 >5AUQ-A nrPDB Length = 248 Score = 30.2 bits (67), Expect = 0.67, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 36/87 (41%), Gaps = 13/87 (14%) Query: 87 LVYDITNGKSFENISKWLRNIDEHANEDVERMLLGN-KCDMDDKRVVPKGKGEQIAREHG 145 LV + S + K + + E ++ ++ N K + +++ + E++A E G Sbjct: 154 LVVATPSKLSLNVVRKLIELLKEEGHK--VIGVVENMK--LRSEQLDDEKDVEKLAEEFG 209 Query: 146 IRFF-------ETSAKANINIEKAFLT 165 + + + AK N+E+ T Sbjct: 210 VPYLVGIPFYPDLDAKVG-NVEELMKT 235 >5LKM-A nrPDB Length = 452 Score = 30.2 bits (67), Expect = 0.68, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 59/152 (38%), Gaps = 47/152 (30%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK----IKLQIWDTAG 67 +L+ GD G+GK+ +L + +T +S +G + + G++ IKL+ Sbjct: 91 VLIGGDPGIGKSTLLLQ------VSTQLSQVGT-----VLYVSGEESAQQIKLR------ 133 Query: 68 QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERM--------- 118 ER I + +Y +Y TN +S + + I D + Sbjct: 134 AERLGDIDSEFY--------LYAETNMQS---VRAEVERIQ----PDFLIIDSIQTIMSP 178 Query: 119 -LLGNKCDMDDKRVVPKGKGEQIAREHGIRFF 149 + G + + R V + Q+A+ + I F Sbjct: 179 EISGVQGSVSQVREVT-AELMQLAKTNNIAIF 209 >2CE7-A nrPDB Length = 476 Score = 30.2 bits (67), Expect = 0.68, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIK 59 +LL+G G GKT +L R N F G DF V + +++ Sbjct: 52 ILLVGPPGTGKT-LLARAVAGEANVPFFHISGSDFVELFVGVGAARVR 98 >5OFO-C nrPDB Length = 871 Score = 30.2 bits (67), Expect = 0.69, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 4/28 (14%) Query: 13 LLIGDSGVGKTCVL----FRFSDDAFNT 36 +LIG+ GVGKT ++ R + Sbjct: 207 VLIGEPGVGKTAIVEGLAQRIINGEVPE 234 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 15/25 (60%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTT 37 L +G +GVGKT + ++ F++ Sbjct: 606 LFLGPTGVGKTELCKALANFMFDSD 630 >5IDV-A nrPDB Length = 279 Score = 30.2 bits (67), Expect = 0.69, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 11/19 (57%) Query: 12 LLLIGDSGVGKTCVLFRFS 30 + L+G SG GKT ++ Sbjct: 68 VALVGRSGAGKTSLVNMLV 86 >4CIU-A nrPDB Length = 727 Score = 30.2 bits (67), Expect = 0.69, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 4/28 (14%) Query: 13 LLIGDSGVGKTCVL----FRFSDDAFNT 36 +LIG+ GVGKT ++ R + Sbjct: 61 VLIGEPGVGKTAIVEGLAQRIINGEVPE 88 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 15/25 (60%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTT 37 L +G +GVGKT + ++ F++ Sbjct: 460 LFLGPTGVGKTELCKALANFMFDSD 484 >1JBK-A nrPDB Length = 195 Score = 30.2 bits (67), Expect = 0.69, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 4/28 (14%) Query: 13 LLIGDSGVGKTCVL----FRFSDDAFNT 36 +LIG+ GVGKT ++ R + Sbjct: 47 VLIGEPGVGKTAIVEGLAQRIINGEVPE 74 >5IFK-A nrPDB Length = 312 Score = 30.2 bits (67), Expect = 0.71, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Query: 128 DKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170 D+ VP +G+ E E SAKA+ ++++ ++ +I Sbjct: 268 DENPVPIQEGKATHEEV----LENSAKASKDVQELIFSVVAEI 306 >5W7Q-A nrPDB Length = 373 Score = 30.2 bits (67), Expect = 0.71, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 37/124 (29%), Gaps = 25/124 (20%) Query: 21 GKTCVLFRFSD------DAFNTTFIS--------TIGIDFKIKTVELQGKKIKLQIWDTA 66 GKT + + A + GI VE + + D Sbjct: 17 GKTTLTAAITTVLAKKGGAEAKAYDQIDNAPEEKARGITINTAHVEYETENRHYAHVDCP 76 Query: 67 GQERFHTITTSYYRGA---MGIMLVYDITNGKSFENISKWLRNIDEHANEDVE-RMLLGN 122 G + + GA G +LV +G + + +I V ++ N Sbjct: 77 GHADY---VKNMITGAAQMDGAILVVSAADGP----MPQTREHILLARQVGVPYIVVFLN 129 Query: 123 KCDM 126 KCDM Sbjct: 130 KCDM 133 >3DEF-A nrPDB Length = 262 Score = 29.8 bits (66), Expect = 0.73, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 1/59 (1%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68 +L++G GVGK+ + + + V + I DT G Sbjct: 37 MTVLVLGKGGVGKSSTVNSLIGEQVVRV-SPFQAEGLRPVMVSRTMGGFTINIIDTPGL 94 >3VX4-A nrPDB Length = 273 Score = 29.8 bits (66), Expect = 0.74, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 11/50 (22%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60 K+ L+G SG GKT + + + GI V + G +K+ Sbjct: 63 KVSLVGASGSGKTTLAKLIVN-----FYEPNKGI------VRINGNDLKV 101 >4Q7L-A nrPDB Length = 256 Score = 29.8 bits (66), Expect = 0.75, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 3/24 (12%) Query: 11 KLLLIGDSGVGKTC---VLFRFSD 31 K+ L+G +G GKT +L RF D Sbjct: 33 KVALVGPTGSGKTTIVNLLMRFYD 56 >1QVR-A nrPDB Length = 854 Score = 29.8 bits (66), Expect = 0.76, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 13 LLIGDSGVGKTCVL----FRFSDDAFNT 36 +LIG+ GVGKT ++ R Sbjct: 195 VLIGEPGVGKTAIVEGLAQRIVKGDVPE 222 Score = 27.1 bits (59), Expect = 4.7, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 14/25 (56%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTT 37 L +G +GVGKT + + F+T Sbjct: 592 LFLGPTGVGKTELAKTLAATLFDTE 616 >4YPN-A nrPDB Length = 293 Score = 29.8 bits (66), Expect = 0.76, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 11/14 (78%) Query: 12 LLLIGDSGVGKTCV 25 L+L+G GVGKT + Sbjct: 146 LVLVGPPGVGKTSL 159 >4YPL-A nrPDB Length = 555 Score = 29.8 bits (66), Expect = 0.76, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 11/14 (78%) Query: 12 LLLIGDSGVGKTCV 25 L+L+G GVGKT + Sbjct: 113 LVLVGPPGVGKTSL 126 >6HA8-V nrPDB Length = 548 Score = 29.8 bits (66), Expect = 0.78, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 12/17 (70%) Query: 11 KLLLIGDSGVGKTCVLF 27 K+ +IG +G GKT +L Sbjct: 325 KVAIIGPNGSGKTTLLN 341 >6ED3-A nrPDB Length = 848 Score = 29.8 bits (66), Expect = 0.80, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 5/35 (14%) Query: 13 LLIGDSGVGKTCVL----FRFSDDAFNTTF-ISTI 42 +LIG+ GVGKT ++ R + TI Sbjct: 203 VLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTI 237 Score = 27.1 bits (59), Expect = 5.0, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 14/25 (56%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTT 37 + +G +GVGKT + +D F+ Sbjct: 604 MFLGPTGVGKTELAKALADFLFDDE 628 >3P27-A nrPDB Length = 483 Score = 29.8 bits (66), Expect = 0.81, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 50/184 (27%), Gaps = 45/184 (24%) Query: 13 LLIGDSGVGKTCVLFRFSDD------------------------AFNTTFISTIGIDFKI 48 +++G GK+ ++ R D F T + Sbjct: 37 VVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERG 96 Query: 49 KTVEL-----QGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW 103 TV + + I D G F A +L D + +FE+ Sbjct: 97 VTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVD-CSTNAFESGFDL 155 Query: 104 LRNIDEH-------ANEDVERMLLGNKCDMDDKRVVPKGK--GEQIAREHGIRFFETSAK 154 EH ++ + NK D D + + + I FFE Sbjct: 156 DGQTKEHMLLASSLGIHNLIIAM--NKMDNVDWSQQRFEEIKSKLLPYLVDIGFFE---- 209 Query: 155 ANIN 158 NIN Sbjct: 210 DNIN 213 >2GZA-A nrPDB Length = 361 Score = 29.8 bits (66), Expect = 0.81, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Query: 12 LLLIGDSGVGKTCVLFRFSDDA-FNTTFISTIGI 44 +++ G++G GKT ++ + F+ I TI Sbjct: 178 IVVAGETGSGKTTLMKALMQEIPFDQRLI-TIED 210 >3EC2-A nrPDB Length = 180 Score = 29.8 bits (66), Expect = 0.83, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 33/99 (33%), Gaps = 18/99 (18%) Query: 12 LLLIGDSGVGKT-----CVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL------ 60 L +G GVGKT + + F T + F++K + +GK K Sbjct: 41 LTFVGSPGVGKTHLAVATLKAIYEKKGIRGYFFDTKDLIFRLKHLMDEGKDTKFLKTVLN 100 Query: 61 ---QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKS 96 + D G ER ++ Y N KS Sbjct: 101 SPVLVLDDLGSERLSDWQRELIS----YIITYRYNNLKS 135 >3PV0-A nrPDB Length = 381 Score = 29.8 bits (66), Expect = 0.86, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 16/33 (48%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGI 44 ++ +G SG GK+ +L + T+ IG Sbjct: 32 VVFVGPSGCGKSTLLRMIAGLETITSGDLFIGE 64 >5ANB-A nrPDB Length = 398 Score = 29.8 bits (66), Expect = 0.88, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 17/43 (39%) Query: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLT 165 K + ++ + G + ++F +TS+K + + Sbjct: 341 KRALTLRKSITTQTGRAALEKITLKFIDTSSKFGHGLHQTAED 383 >3B5X-A nrPDB Length = 582 Score = 29.8 bits (66), Expect = 0.88, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 11/48 (22%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIK 59 + L+G SG GK+ + F T D ++ L G ++ Sbjct: 372 VALVGRSGSGKSTIANLF-----------TRFYDVDSGSICLDGHDVR 408 >1H65-A nrPDB Length = 270 Score = 29.8 bits (66), Expect = 0.88, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 5/59 (8%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK--IKLQIWDTAGQ 68 +L++G GVGK+ + + + + V + + L I DT G Sbjct: 42 ILVMGKGGVGKSSTVNSIIGERVVS-ISP--FQSEGPRPVMVSRSRAGFTLNIIDTPGL 97 >1YR7-A nrPDB Length = 262 Score = 29.8 bits (66), Expect = 0.89, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 41/114 (35%), Gaps = 22/114 (19%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL------QIWDT 65 ++ +G +G GKT + F + + ++K+ V L +L + + Sbjct: 17 VVFVGTAGSGKTTLTGEF--GRY-------LEDNYKVAYVNLDTGVKELPYEPSIDVREF 67 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERML 119 E + Y I+ YD + E +++L I E+ ++ Sbjct: 68 VTVEEI--MREGYGPNG-AIVESYD----RLMEKFNEYLNKILRLEKENDYVLI 114 >3J3U-A nrPDB Length = 810 Score = 29.8 bits (66), Expect = 0.89, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVE 52 +LIG+ GVGKT + + + I D ++ T++ Sbjct: 205 VLIGEPGVGKTAIAEGLAQ-QIINNEVPEILRDKRVMTLD 243 >3IBY-A nrPDB Length = 256 Score = 29.8 bits (66), Expect = 0.89, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 63/181 (34%), Gaps = 29/181 (16%) Query: 13 LLIGDSGVGKTCVLFRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG---- 67 LLIG+ GKT + ++ + + G+ + KT E + ++I D G Sbjct: 5 LLIGNPNCGKTTLFNALTNANQRVGNWP---GVTVEKKTGEFLLGEHLIEITDLPGVYSL 61 Query: 68 --------QER---FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVE 116 Q+ ++ Y I+ V D + + ++ L + + Sbjct: 62 VANAEGISQDEQIAAQSVIDLEY---DCIINVIDACHLERHLYLTSQLFELGK------P 112 Query: 117 RMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPV 176 ++ N D+ + R + E++ G A NI I +L + P+ Sbjct: 113 VVVALNMMDIAEHRGISIDT-EKLESLLGCSVIPIQAHKNIGIPALQQSLLHCSQKIKPL 171 Query: 177 K 177 K Sbjct: 172 K 172 >1LVG-A nrPDB Length = 198 Score = 29.8 bits (66), Expect = 0.91, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 13/22 (59%) Query: 12 LLLIGDSGVGKTCVLFRFSDDA 33 ++L G SG GK+ +L + + Sbjct: 7 VVLSGPSGAGKSTLLKKLFQEH 28 >5D4W-A nrPDB Length = 926 Score = 29.8 bits (66), Expect = 0.92, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 12/14 (85%) Query: 13 LLIGDSGVGKTCVL 26 +LIG+ GVGKT ++ Sbjct: 220 VLIGEPGVGKTTIV 233 >4J0Q-A nrPDB Length = 433 Score = 29.8 bits (66), Expect = 0.92, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 54/171 (31%), Gaps = 31/171 (18%) Query: 1 MAKKTYDLLFKLLLIGDSG-V--GKTCV---LFRFSDDAFNTTFIS-----------TIG 43 MAK+ +D + +G G V GKT + L R + F + + G Sbjct: 37 MAKEKFDRSLPHVNVGTIGHVDHGKTTLTAALTRVCSEVFGSAIVEFDKIDSAPEEKARG 96 Query: 44 IDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGA---MGIMLVYDITNGKSFENI 100 I VE D G + + GA G +LV +G + Sbjct: 97 ITINTAHVEYNSTIRHYAHVDCPGHADY---VKNMITGAAQMDGAILVCSAADGP----M 149 Query: 101 SKWLRNIDEHANEDVE-RMLLGNKCDMDDKR---VVPKGKGEQIAREHGIR 147 + +I V ++ NK D+ D + + + + + Sbjct: 150 PQTREHILLSRQVGVPYIVVFLNKADLVDDAELLELVEMEVRDLLSTYDFP 200 >3CNO-A nrPDB Length = 262 Score = 29.8 bits (66), Expect = 0.93, Method: Composition-based stats. Identities = 6/29 (20%), Positives = 16/29 (55%) Query: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDA 33 ++D L ++L++G GK+ ++ + Sbjct: 95 SFDRLARVLIVGVPNTGKSTIINKLKGKR 123 >5OWV-A nrPDB Length = 732 Score = 29.4 bits (65), Expect = 0.94, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 3/59 (5%) Query: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQG-KKIKLQIWD 64 +L F + + G GK+ +L + F +S I + + ++ K+ WD Sbjct: 160 NLEFNIAITGVMNAGKSSLLNALLKEDFLG--VSNIPETANLTVLSYGKSEEAKIYFWD 216 >4RY2-A nrPDB Length = 730 Score = 29.4 bits (65), Expect = 0.94, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 11/48 (22%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIK 59 + ++G+SG GKT + + + G + + G IK Sbjct: 518 VAIVGESGSGKTTLAKLLMN-----FYSPEKGD------ILINGHSIK 554 >4HSE-A nrPDB Length = 397 Score = 29.4 bits (65), Expect = 0.95, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 4/28 (14%) Query: 13 LLIGDSGVGKTCVL----FRFSDDAFNT 36 +LIG+ GVGKT ++ R Sbjct: 58 VLIGEPGVGKTAIVEGLAQRIVKGDVPE 85 >5B3F-A nrPDB Length = 343 Score = 29.4 bits (65), Expect = 0.97, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Query: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGID 45 L++ + + GDSG GK+ R D F +S+I +D Sbjct: 36 LVYLIGVAGDSGSGKSTFT-RAISDIFGEELVSSITVD 72 >3IZQ-1 nrPDB Length = 611 Score = 29.4 bits (65), Expect = 1.00, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 50/184 (27%), Gaps = 45/184 (24%) Query: 13 LLIGDSGVGKTCVLFRFSDD------------------------AFNTTFISTIGIDFKI 48 +++G GK+ ++ R D F T + Sbjct: 171 VVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERG 230 Query: 49 KTVEL-----QGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW 103 TV + + I D G F A +L D + +FE+ Sbjct: 231 VTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVD-CSTNAFESGFDL 289 Query: 104 LRNIDEH-------ANEDVERMLLGNKCDMDDKRVVPKGK--GEQIAREHGIRFFETSAK 154 EH ++ + NK D D + + + I FFE Sbjct: 290 DGQTKEHMLLASSLGIHNLIIAM--NKMDNVDWSQQRFEEIKSKLLPYLVDIGFFE---- 343 Query: 155 ANIN 158 NIN Sbjct: 344 DNIN 347 >5MKK-A nrPDB Length = 611 Score = 29.4 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 3/24 (12%) Query: 11 KLLLIGDSGVGKT---CVLFRFSD 31 K+ L+G +G GKT ++ RF D Sbjct: 387 KVALVGATGAGKTSVVSLIARFYD 410 >3TR5-A nrPDB Length = 528 Score = 29.4 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 46/142 (32%), Gaps = 10/142 (7%) Query: 11 KLLLIG----DSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 KLLL G +G K+ R + + GI ++ K + + DT Sbjct: 32 KLLLFGGAIQLAGTIKSRKAARHATSDWME-LEKQRGISVTTSVMQFPYKDYLINLLDTP 90 Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDM 126 G F T ++V D G + ++ ++ M NK D Sbjct: 91 GHADFTEDTYRTLTAVDSALMVIDAAKG----VEPRTIKLMEVCRLRHTPIMTFINKMDR 146 Query: 127 DDKRVVP-KGKGEQIAREHGIR 147 D + + + E I R H Sbjct: 147 DTRPSIELLDEIESILRIHCAP 168 >4IXM-A nrPDB Length = 318 Score = 29.4 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI 58 LL G G GKT +L R + + I+ I +F V + + I Sbjct: 8 LLTGFLGAGKTTLL-RHILNEQHGYKIAVIENEFGE--VSVDDQLI 50 >4HZI-A nrPDB Length = 294 Score = 29.4 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 +L+G +G GK+ ++ + T+ + + + + +Q + ++ I D++ QE Sbjct: 63 CVLLGRNGAGKSTLVNLIYGMIWATSGTIRLFQETYGE-IAIQDLRKRIGILDSSQQE 119 >3V9H-A nrPDB Length = 566 Score = 29.4 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 3/35 (8%) Query: 91 ITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 + + KSF I KWL + + +L G KCD Sbjct: 394 VIDAKSFARIKKWLEHAR---SSPSLTILAGGKCD 425 >2MHH-A nrPDB Length = 96 Score = 29.4 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 20/43 (46%) Query: 102 KWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKGKGEQIAREH 144 +W + + + D + + K D+D RV+ + ++A + Sbjct: 39 EWRQELKCRGHADADIEAVFAKYDVDGDRVLDAEEQMKMAHDL 81 >2AXV-A nrPDB Length = 317 Score = 29.4 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 5/65 (7%) Query: 127 DDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLT-----LAEDILRKTPVKEPNS 181 D R + + + + G+ FFE +A +N + T L I + + N Sbjct: 37 ADSRPISVEELSKFSERLGVNFFEILNRAGMNTKSVNETGKEKLLISKIFTNPDLFDKNF 96 Query: 182 ENVDI 186 + ++ Sbjct: 97 QRIEP 101 >4XGC-E nrPDB Length = 460 Score = 29.4 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 43/125 (34%), Gaps = 19/125 (15%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGID----FKIKTV---------ELQGKKI 58 + L G SG GKT + F + + T ++ + K + QG + Sbjct: 37 IYLFGHSGTGKTALTRAFLKECGKRQNVRTAHLNAIECYTTKIMLEILLDSLAPDQGDAL 96 Query: 59 KL-QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKS--FENISKWLRNIDEHANEDV 115 K+ + D Q R T G ++ D N+ L + E N ++ Sbjct: 97 KVDNMLDFVEQLRRQAATRV---EDQGFLIAVDNAERLRDMDANVLPVLLRLQELTNLNL 153 Query: 116 ERMLL 120 +LL Sbjct: 154 CVILL 158 >4MYH-A nrPDB Length = 598 Score = 29.4 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 17/52 (32%) Query: 11 KLLLIGDSGVGKTC---VLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIK 59 K ++G SG GK+ ++FRF + G + + G+ IK Sbjct: 367 KTAIVGSSGSGKSTILKLVFRF--------YDPESG------RILINGRDIK 404 >3LLM-A nrPDB Length = 235 Score = 29.4 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 14/26 (53%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTT 37 +++ G +G GKT + +F D F Sbjct: 79 VIIRGATGCGKTTQVPQFILDDFIQN 104 >6ID0-C nrPDB Length = 972 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 40/125 (32%), Gaps = 24/125 (19%) Query: 21 GKTCVLFRFSDDAFNT---TFISTI------------GIDFKIKTVEL-----QGKKIKL 60 GKTC + + + + G+ K V + +GK Sbjct: 141 GKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVTVVLPDTKGKSYLF 200 Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120 I DT G F T+ R + G++L D G + R I E + + Sbjct: 201 NIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEG----VMLNTERLIKHAVQERLAVTVC 256 Query: 121 GNKCD 125 NK D Sbjct: 257 INKID 261 >3NHB-A nrPDB Length = 306 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 3/23 (13%) Query: 12 LLLIGDSGVGKTC---VLFRFSD 31 L L+G SG GK+ +LFRF D Sbjct: 83 LALVGPSGAGKSTILRLLFRFYD 105 >6D00-1 nrPDB Length = 883 Score = 29.0 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 4/29 (13%) Query: 13 LLIGDSGVGKTC----VLFRFSDDAFNTT 37 L+G+ GVGKT + R ++ Sbjct: 203 CLVGEPGVGKTAIAEGLANRIVKGDIPSS 231 >4DBL-C nrPDB Length = 249 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 12/17 (70%) Query: 12 LLLIGDSGVGKTCVLFR 28 L L+G +G GK+ +L R Sbjct: 29 LHLVGPNGAGKSTLLAR 45 >1LV7-A nrPDB Length = 257 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 3/49 (6%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTI-GIDFKIKTVELQGKKIK 59 +L++G G GKT + + +A F TI G DF V + +++ Sbjct: 48 VLMVGPPGTGKTLLAKAIAGEAKVPFF--TISGSDFVEMFVGVGASRVR 94 >2GA8-A nrPDB Length = 359 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 7/57 (12%) Query: 12 LLLIGDSGVGKTCVLFRFSD------DAFNTTFISTIGIDFKIKT-VELQGKKIKLQ 61 ++L+G G GK+ + F + + I ++ ++K V L LQ Sbjct: 27 VILVGSPGSGKSTIAEELCQIINEKYHTFLSEHPNVIEVNDRLKPMVNLVDSLKTLQ 83 >3J81-k nrPDB Length = 527 Score = 29.0 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 36/103 (34%), Gaps = 30/103 (29%) Query: 117 RMLLGNKCDMDDKRVVPKGKGEQ---------IAREHGIRFFETSAKANINIEKAFLTLA 167 ++L NK D+ R + ++ IA G SA+ NI+ + Sbjct: 244 VIILQNKVDL--MREESALEHQKSILKFIRGTIAD--GAPIVPISAQLKYNIDAVNEFIV 299 Query: 168 EDI---------------LRKTPVKEPNSENVDISSGGGVTGW 195 + I +R V +P +E D+ GGV G Sbjct: 300 KTIPVPPRDFMISPRLIVIRSFDVNKPGAEIEDLK--GGVAGG 340 >5B57-C nrPDB Length = 273 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 7/20 (35%), Positives = 13/20 (65%) Query: 13 LLIGDSGVGKTCVLFRFSDD 32 L+G +G GK+ +L F+ + Sbjct: 31 ALLGRNGAGKSTLLKTFAGE 50 >5MRE-WW nrPDB Length = 401 Score = 29.0 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 13/18 (72%) Query: 11 KLLLIGDSGVGKTCVLFR 28 K ++ G+ GVGKT +L + Sbjct: 96 KFIITGEPGVGKTVLLSQ 113 >1V43-A nrPDB Length = 372 Score = 29.0 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 13/26 (50%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTT 37 L+L+G SG GKT L + T Sbjct: 40 LVLLGPSGCGKTTTLRMIAGLEEPTE 65 >6BK7-A nrPDB Length = 407 Score = 29.0 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 29/83 (34%), Gaps = 4/83 (4%) Query: 43 GIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK 102 GI Q K ++ I DT G F R G + V D +G + + Sbjct: 63 GITITSAATTAQWKGYRVNIIDTPGHVDFTIEVQRSLRVLDGAVTVLDSQSGVEPQTETV 122 Query: 103 WLRNIDEHANEDVERMLLGNKCD 125 W + V R++ NK D Sbjct: 123 W----RQATEYKVPRIVFCNKMD 141 >2ZBL-A nrPDB Length = 421 Score = 29.0 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 11/73 (15%) Query: 45 DFKIKTVE----LQGKKIKLQIWDTA-GQERFHTITTSYYRGAMGIMLVYDITNGKSFEN 99 D+ I+ +E + +++ L+ WD A Q + + ++VYD+T+ Sbjct: 136 DYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHD----- 190 Query: 100 ISKWLRNIDEHAN 112 KWL A+ Sbjct: 191 -KKWLDRALRIAS 202 >2NQL-A nrPDB Length = 388 Score = 29.0 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 10/18 (55%) Query: 60 LQIWDTAGQERFHTITTS 77 + +WD AGQE +I Sbjct: 128 IALWDIAGQEAGKSIRDL 145 >6EMW-E nrPDB Length = 181 Score = 28.6 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 15/30 (50%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTTFISTI 42 +LIG+ GVGKT + + N T+ Sbjct: 44 VLIGEPGVGKTAIAEGLAQAIVNNEVPETL 73 >6EM8-A nrPDB Length = 818 Score = 28.6 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 10/30 (33%), Positives = 15/30 (50%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTTFISTI 42 +LIG+ GVGKT + + N T+ Sbjct: 205 VLIGEPGVGKTAIAEGLAQAIVNNEVPETL 234 >6FA9-A nrPDB Length = 655 Score = 28.6 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 15/21 (71%) Query: 12 LLLIGDSGVGKTCVLFRFSDD 32 L+L+G++G GKT + ++ + Sbjct: 50 LILVGETGSGKTTQIPQYLHE 70 >2P65-A nrPDB Length = 187 Score = 28.6 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 12/14 (85%) Query: 13 LLIGDSGVGKTCVL 26 +L+GD GVGKT ++ Sbjct: 47 ILLGDPGVGKTAIV 60 >4O0M-A nrPDB Length = 524 Score = 28.6 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 15/36 (41%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKI 48 L+ G SG GKT +F + I + F+ Sbjct: 44 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTFEE 79 >6EPC-H nrPDB Length = 433 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV 51 +LL G G GKT + R + + FI IG + K V Sbjct: 212 VLLFGPPGTGKT-LCARAVANRTDACFIPVIGSELVQKYV 250 >1OFI-A nrPDB Length = 310 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 14/20 (70%) Query: 12 LLLIGDSGVGKTCVLFRFSD 31 +L+IG +GVGKT + R + Sbjct: 53 ILMIGPTGVGKTEIARRLAK 72 >1IM2-A nrPDB Length = 444 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 14/20 (70%) Query: 12 LLLIGDSGVGKTCVLFRFSD 31 +L+IG +GVGKT + R + Sbjct: 53 ILMIGPTGVGKTEIARRLAK 72 >4AYX-A nrPDB Length = 595 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 61/177 (34%), Gaps = 40/177 (22%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIK-LQ-IW-----DT 65 L+G SG GK+ VL + G T+ L G I+ L +W T Sbjct: 374 ALVGPSGSGKSTVLSLLLRL-----YDPASG------TISLDGHDIRQLNPVWLRSKIGT 422 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN-----EDVER--- 117 QE + ++ + Y + S ++ ++ + E AN + + Sbjct: 423 VSQE------PILFSCSIAENIAYGADDPSSV--TAEEIQRVAEVANAVAFIRNFPQGFN 474 Query: 118 MLLGNK-CDMDDKRVVPKGKGEQIAREHGIRFFE--TSAKANIN---IEKAFLTLAE 168 ++G K + + + + I + TSA N +++A L + Sbjct: 475 TVVGEKGVLLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMD 531 >1E94-E nrPDB Length = 449 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 14/20 (70%) Query: 12 LLLIGDSGVGKTCVLFRFSD 31 +L+IG +GVGKT + R + Sbjct: 59 ILMIGPTGVGKTEIARRLAK 78 >3GD7-A nrPDB Length = 390 Score = 28.6 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 7/20 (35%), Positives = 13/20 (65%) Query: 11 KLLLIGDSGVGKTCVLFRFS 30 ++ L+G +G GK+ +L F Sbjct: 49 RVGLLGRTGSGKSTLLSAFL 68 >1Z47-A nrPDB Length = 355 Score = 28.6 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 11/46 (23%) Query: 14 LIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIK 59 L+G SG GKT +L + T G V + GK++ Sbjct: 46 LLGPSGSGKTTILRLIAGLE-----RPTKGD------VWIGGKRVT 80 >1MJ1-A nrPDB Length = 405 Score = 28.6 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 39/130 (30%), Gaps = 26/130 (20%) Query: 21 GKTCVLFRFSD-------DAFNTTF--------ISTIGIDFKIKTVELQGKKIKLQIWDT 65 GKT + + + + GI VE + K D Sbjct: 23 GKTTLTAALTYVAAAENRNVEVKDYGDIDKAREERARGITINTAHVEYETAKRHYSHVDC 82 Query: 66 AGQERFHTITTSYYRGA---MGIMLVYDITNGKSFENISKWLRNIDEHANEDVE-RMLLG 121 G + + GA G +LV +G+ + + +I V ++ Sbjct: 83 RGHADY---IKNMITGAAQMDGAILVVSAADGR----MRQTREHILLARQVGVRYIVVFM 135 Query: 122 NKCDMDDKRV 131 NK DM D R Sbjct: 136 NKVDMVDDRE 145 >2HDN-B nrPDB Length = 335 Score = 28.6 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 29/88 (32%), Gaps = 11/88 (12%) Query: 43 GIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGA---MGIMLVYDITNGKSFEN 99 GI VE D G + + GA G +LV T+G Sbjct: 1 GITINTSHVEYDTPTRHYAHVDCPGHADY---VKNMITGAAQMDGAILVVAATDGP---- 53 Query: 100 ISKWLRNIDEHANEDVE-RMLLGNKCDM 126 + + +I V ++ NKCDM Sbjct: 54 MPQTREHILLGRQVGVPYIIVFLNKCDM 81 >6N0I-A nrPDB Length = 706 Score = 28.6 bits (63), Expect = 2.1, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 4/69 (5%) Query: 57 KIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVE 116 K + I DT G F R G ++V+ +G ++ + W + H V Sbjct: 85 KYRFNIIDTPGHVDFTIEVERSLRVLDGAVVVFSGADGVEPQSETVWRQANKYH----VP 140 Query: 117 RMLLGNKCD 125 R+ NK D Sbjct: 141 RLAYINKMD 149 >6AMN-A nrPDB Length = 349 Score = 28.2 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 1/30 (3%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTTFISTI 42 LIG+ G+GKT ++ + + + TI Sbjct: 206 CLIGEPGIGKTAIIEGVAQRIIDDD-VPTI 234 >1WXQ-A nrPDB Length = 397 Score = 28.2 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 7/70 (10%) Query: 98 ENISKWLRN-IDEHANE----DVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRFFETS 152 E+ +KW ++ + A+E + ++ NK D + + E+ + G TS Sbjct: 193 EDPTKWSQDDLLAFASEIRRVNKPMVIAANKADAASDEQIKRLVREE--EKRGYIVIPTS 250 Query: 153 AKANINIEKA 162 A A + + KA Sbjct: 251 AAAELTLRKA 260 Score = 26.7 bits (58), Expect = 6.9, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 33/113 (29%), Gaps = 31/113 (27%) Query: 10 FKLLLIGDSGVGKTCV--LFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIK-------- 59 ++ ++G VGK+ D +TI + + T + K Sbjct: 1 MEIGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIEANVGV-TYAITDHPCKELGCSPNP 59 Query: 60 -------------LQIWDTAGQ----ERFHTITTSY---YRGAMGIMLVYDIT 92 +++ D AG + + R A ++ V D T Sbjct: 60 QNYEYRNGLALIPVKMVDVAGLVPGAHEGRGLGNKFLDDLRMASALIHVVDAT 112 >6QUZ-A nrPDB Length = 587 Score = 28.2 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 23/49 (46%), Gaps = 8/49 (16%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60 + ++G++G GK+ ++ + G +++ EL + +KL Sbjct: 372 VAVLGETGSGKSTLM-----NLIPRLIDPERG---RVEVDELDVRTVKL 412 >5VHD-D nrPDB Length = 870 Score = 28.2 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 14/24 (58%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNT 36 ++ G++G GKT + +F D + Sbjct: 80 VISGETGCGKTTQVTQFILDNYIE 103 >4XGC-D nrPDB Length = 459 Score = 28.2 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 12/21 (57%) Query: 12 LLLIGDSGVGKTCVLFRFSDD 32 LLL+G G GKT ++ D Sbjct: 52 LLLLGPRGSGKTTLINSVLAD 72 >5EUF-A nrPDB Length = 419 Score = 28.2 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 1/48 (2%) Query: 70 RFHTITTSYYRGAMGIMLVY-DITNGKSFENISKWLRNIDEHANEDVE 116 + YY+ I+LV D+ + K FE K ++ + + Sbjct: 178 DIKKFHSLYYQPKNAIVLVVGDVNSQKVFELTKKHFESLKNLDEKAIP 225 >1IHU-A nrPDB Length = 589 Score = 28.2 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 4/28 (14%) Query: 12 LLLIGDSGVGKTC----VLFRFSDDAFN 35 ++L+G GVGKT + R +D F+ Sbjct: 330 IMLMGKGGVGKTTMAAAIAVRLADMGFD 357 >3MMP-A nrPDB Length = 678 Score = 28.2 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 37/124 (29%), Gaps = 25/124 (20%) Query: 21 GKTCVLFRFSD----------DAFNT----TFISTIGIDFKIKTVELQGKKIKLQIWDTA 66 GKT + + AF+ GI VE D Sbjct: 308 GKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCP 367 Query: 67 GQERFHTITTSYYRGA---MGIMLVYDITNGKSFENISKWLRNIDEHANEDVE-RMLLGN 122 G + + GA G +LV T+G + + +I V ++ N Sbjct: 368 GHADY---VKNMITGAAQMDGAILVVAATDGP----MPQTREHILLGRQVGVPYIIVFLN 420 Query: 123 KCDM 126 KCDM Sbjct: 421 KCDM 424 >5DGX-A nrPDB Length = 256 Score = 28.2 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTI---GIDFKIKTVE-------LQGKKIKL 60 + +G SG GKT + F T I G+D + T+E + + + L Sbjct: 47 VAFVGKSGSGKTTLTS--IISRFYTQHEGEILLDGVDTRELTLENLRSHLSIVSQNVHL 103 >2QOR-A nrPDB Length = 204 Score = 28.2 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 21/82 (25%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTF-------------ISTIGIDFKIKTVELQGKKI 58 L++ G SGVGK ++ + F + F T G+D+ V+ + Sbjct: 15 LVVCGPSGVGKGTLIKKVLS-EFPSRFRFSISCTTRNKREKETNGVDYY--FVDKDDFER 71 Query: 59 KLQIWDTAGQ-ERFHTITTSYY 79 KL+ GQ F ++Y Sbjct: 72 KLK----EGQFLEFDKYANNFY 89 >2D62-A nrPDB Length = 375 Score = 28.2 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 5/46 (10%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK 57 L+L+G SG GKT L + T G + + +K Sbjct: 35 LVLLGPSGCGKTTTLRMIAGLE-----EPTRGQIYIEDNLVADPEK 75 >5JWO-A nrPDB Length = 247 Score = 28.2 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 15/36 (41%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKI 48 L+ G SG GKT +F + I + F+ Sbjct: 36 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTFEE 71 >5JSZ-B nrPDB Length = 287 Score = 28.2 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 5/32 (15%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIG 43 + L+G +G GK+ ++ FN T G Sbjct: 36 IALVGHTGSGKSTLMQ-----HFNALLKPTSG 62 >5I92-A nrPDB Length = 435 Score = 28.2 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Query: 75 TTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDV 115 T +++ A G V D + + + + W I H++ DV Sbjct: 40 TPLFFKHAEGA-YVLDEDDKRYVDYVGSWGPMILGHSHPDV 79 >5VY8-A nrPDB Length = 908 Score = 28.2 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 1/30 (3%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTTFISTI 42 LIG+ G+GKT ++ + + + TI Sbjct: 209 CLIGEPGIGKTAIIEGVAQRIIDDD-VPTI 237 >1SXJ-C nrPDB Length = 340 Score = 28.2 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 32/98 (32%), Gaps = 22/98 (22%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTI---------GIDFKIKTV-------ELQG 55 LL G G GKT + + + + + + + GID + ++ Sbjct: 49 LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFS 108 Query: 56 KKIKLQIWD------TAGQERFHTITTSYYRGAMGIML 87 K KL I D A Q + Y + +L Sbjct: 109 KGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVL 146 >3D0O-A nrPDB Length = 317 Score = 28.2 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 23/54 (42%), Gaps = 11/54 (20%) Query: 11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64 K++LIG+ VG + F + + + ++L +K++ + D Sbjct: 8 KVVLIGNGAVG-SSYAFSLVNQSIVDELV----------IIDLDTEKVRGDVMD 50 >2RGK-A nrPDB Length = 421 Score = 27.9 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 13/74 (17%) Query: 45 DFKIKTVE----LQGKKIKLQIWDTA--GQERFHTITTSYYRGAMGIMLVYDITNGKSFE 98 D+ I+ +E + +++ L+ WD A E + + ++VYD+T+ Sbjct: 136 DYTIEIIEKYFWSEEEQMCLESWDEAFSKTEEYRG-GNANMHAVEAFLIVYDVTHD---- 190 Query: 99 NISKWLRNIDEHAN 112 KWL A+ Sbjct: 191 --KKWLDRAIRVAS 202 >5NKM-B nrPDB Length = 317 Score = 27.9 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 9/56 (16%), Positives = 21/56 (37%), Gaps = 8/56 (14%) Query: 15 IGDSGVGKTCVLFRFSDDAFNTTFISTIG--------IDFKIKTVELQGKKIKLQI 62 IG G GK+ +L + + + + + +T+++ + QI Sbjct: 34 IGPQGAGKSTLLSMLAGNNSRQMYREYVFRPVSREANEQSRHQTIQIDIYIVNHQI 89 >4Q7K-A nrPDB Length = 250 Score = 27.9 bits (61), Expect = 2.9, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 23/49 (46%), Gaps = 8/49 (16%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60 + ++G++G GK+ ++ + G +++ EL + +KL Sbjct: 34 VAVLGETGSGKSTLM-----NLIPRLIDPERG---RVEVDELDVRTVKL 74 >6BZS-A nrPDB Length = 238 Score = 27.9 bits (61), Expect = 3.0, Method: Composition-based stats. Identities = 6/21 (28%), Positives = 11/21 (52%) Query: 12 LLLIGDSGVGKTCVLFRFSDD 32 L ++G G GK+ +L + Sbjct: 38 LAVVGPVGAGKSSLLSALLGE 58 >4G1U-C nrPDB Length = 266 Score = 27.9 bits (61), Expect = 3.0, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 12/20 (60%) Query: 12 LLLIGDSGVGKTCVLFRFSD 31 + +IG +G GK+ +L + Sbjct: 40 VAIIGPNGAGKSTLLRLLTG 59 >1KAG-A nrPDB Length = 173 Score = 27.9 bits (61), Expect = 3.0, Method: Composition-based stats. Identities = 9/51 (17%), Positives = 22/51 (43%), Gaps = 5/51 (9%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKI-----KTVELQGKK 57 + L+G G GK+ + + + + S I+ + +L+G++ Sbjct: 7 IFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEE 57 >5VH6-A nrPDB Length = 409 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 35/122 (28%), Gaps = 20/122 (16%) Query: 20 VGKTCVLFR--FSDDAFNT--------------TFISTIGIDFKIKTVELQGKKIKLQIW 63 GKT R F + GI Q K ++ I Sbjct: 24 AGKTTTTERILFYTGRIHKIGETHEGASQMDWMEQEQERGITITSAATTAQWKGYRVNII 83 Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123 DT G F R G + V D +G + + W + V R++ NK Sbjct: 84 DTPGHVDFTVEVERSLRVLDGAVAVLDAQSGVEPQTETVW----RQATTYGVPRIVFVNK 139 Query: 124 CD 125 D Sbjct: 140 MD 141 >6E11-1 nrPDB Length = 906 Score = 27.9 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 13/29 (44%), Gaps = 4/29 (13%) Query: 13 LLIGDSGVGKTC----VLFRFSDDAFNTT 37 +L+G+ G GKT +++R Sbjct: 232 VLVGNPGTGKTTIVEGLVYRIEKGDVPKE 260 Score = 26.7 bits (58), Expect = 6.6, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 15/25 (60%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTT 37 L +G +GVGKT + + + FN+ Sbjct: 635 LFLGPTGVGKTELAKTLAIELFNSK 659 >5LL6-h nrPDB Length = 608 Score = 27.9 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 14/20 (70%) Query: 12 LLLIGDSGVGKTCVLFRFSD 31 L+++G++G GKT ++ + Sbjct: 381 LVMMGENGTGKTTLIKLLAG 400 >5UCV-A nrPDB Length = 217 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 21/60 (35%) Query: 3 KKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQI 62 K D ++ +G S GK+ + ++ T G I ELQ + + Sbjct: 25 KDLPDTPLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINFFELQNGNFMVDL 84 >1IQP-A nrPDB Length = 327 Score = 27.9 bits (61), Expect = 3.3, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 40/114 (35%), Gaps = 23/114 (20%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFK------IKTVELQGKKIKLQIWDT 65 LL G GVGKT + + F + +F + + + +K+K Sbjct: 49 LLFAGPPGVGKTTAALALARELFGENWRH----NFLELNASDERGINVIREKVK------ 98 Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERML 119 F GA ++ D + + ++ + LR E + +V +L Sbjct: 99 ----EFARTKP--IGGASFKIIFLDEADALT-QDAQQALRRTMEMFSSNVRFIL 145 >4XIG-S nrPDB Length = 363 Score = 27.9 bits (61), Expect = 3.4, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 19/48 (39%), Gaps = 11/48 (22%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIK 59 ++L+G SG GK+ L + + T+ + G+ I Sbjct: 33 VVLVGPSGCGKSTTLRMVAGLE-----------EISGGTIRIDGRVIN 69 >6G2G-A nrPDB Length = 310 Score = 27.9 bits (61), Expect = 3.4, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 12/19 (63%) Query: 12 LLLIGDSGVGKTCVLFRFS 30 L+L G GVGK+ V + + Sbjct: 11 LVLSGKGGVGKSSVTTQLA 29 >2PX0-A nrPDB Length = 296 Score = 27.9 bits (61), Expect = 3.5, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 3/44 (6%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIG---IDFKIKTVE 52 ++L G +G GKT L + + + ++I VE Sbjct: 108 IVLFGSTGAGKTTTLAKLAAISMLEKHKKIAFITTDTYRIAAVE 151 >1WDT-A nrPDB Length = 665 Score = 27.5 bits (60), Expect = 3.6, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 14/33 (42%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDA 33 M + ++ + L+G +G GKT + Sbjct: 1 MGTEGGAMIRTVALVGHAGSGKTTLTEALLYKT 33 >2PCL-A nrPDB Length = 224 Score = 27.5 bits (60), Expect = 3.6, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 12/16 (75%) Query: 12 LLLIGDSGVGKTCVLF 27 + +IG SG GK+ +L+ Sbjct: 33 VSIIGASGSGKSTLLY 48 >5Z1X-A nrPDB Length = 495 Score = 27.5 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Query: 59 KLQIWDTAGQERFHT-ITTSYYRGAMGIMLVYDITNG 94 Q+ D AG +H+ ++T Y G G +VYD T+ Sbjct: 96 NFQVPDQAGTYWYHSHLSTQYCDGLRGAFVVYDPTDP 132 >2W6D-A nrPDB Length = 695 Score = 27.5 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 14/24 (58%) Query: 9 LFKLLLIGDSGVGKTCVLFRFSDD 32 +F+LL++GD GK+ L + Sbjct: 69 VFRLLVLGDMKRGKSTFLNALIGE 92 >6AN5-A nrPDB Length = 242 Score = 27.5 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 5/35 (14%) Query: 14 LIGDSGVGKTCVLFRFS-----DDAFNTTFISTIG 43 ++G +G GK+ +L + D F +G Sbjct: 51 IVGPNGAGKSTLLKVITGVTEPDKGFVERSGKVVG 85 >3G2F-A nrPDB Length = 336 Score = 27.5 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 10/63 (15%), Positives = 27/63 (42%), Gaps = 1/63 (1%) Query: 59 KLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERM 118 L++ + G+ R+ + + V+ N ++F N R + ++++ R Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYR-VPLMEHDNIARF 72 Query: 119 LLG 121 ++G Sbjct: 73 IVG 75 >1EZ4-A nrPDB Length = 318 Score = 27.5 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 7/28 (25%), Positives = 14/28 (50%), Gaps = 3/28 (10%) Query: 11 KLLLIGDSGVGKT---CVLFRFSDDAFN 35 K++L+GD VG + + + + F Sbjct: 7 KVVLVGDGAVGSSYAFAMAQQGIAEEFV 34 >3WMF-A nrPDB Length = 621 Score = 27.5 bits (60), Expect = 3.9, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 3/23 (13%) Query: 12 LLLIGDSGVGKTC---VLFRFSD 31 + ++G SG GK+ +L RF D Sbjct: 382 VAIVGGSGAGKSTIIQLLMRFYD 404 >5NIK-J nrPDB Length = 654 Score = 27.5 bits (60), Expect = 3.9, Method: Composition-based stats. Identities = 5/16 (31%), Positives = 11/16 (68%) Query: 12 LLLIGDSGVGKTCVLF 27 + ++G SG GK+ ++ Sbjct: 37 VAIVGASGSGKSTLMN 52 >5LJA-A nrPDB Length = 231 Score = 27.5 bits (60), Expect = 3.9, Method: Composition-based stats. Identities = 5/16 (31%), Positives = 11/16 (68%) Query: 12 LLLIGDSGVGKTCVLF 27 + ++G SG GK+ ++ Sbjct: 37 VAIVGASGSGKSTLMN 52 >4NP6-A nrPDB Length = 217 Score = 27.5 bits (60), Expect = 3.9, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFIST 41 +++L+G G GK +F + F IST Sbjct: 4 MRIILLGAPGAGKGTQA-QFIMEKFGIPQIST 34 >6MTD-v nrPDB Length = 839 Score = 27.5 bits (60), Expect = 3.9, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 4/72 (5%) Query: 54 QGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANE 113 G + + D+ G F + T+ R G ++V D +G + + + I E Sbjct: 75 DGAGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKP 134 Query: 114 DVERMLLGNKCD 125 +L+ NK D Sbjct: 135 ----VLMMNKMD 142 >6CY1-A nrPDB Length = 329 Score = 27.5 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 8/56 (14%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIG--IDFKIKTVELQGKKIKLQIW 63 + ++++G +GVGKT + + + + +G F+ V+ +L IW Sbjct: 124 YVIMVVGVNGVGKTTTIGKLAHQFKSEGLKVVLGAADTFRAAAVD------QLVIW 173 >4UUD-B nrPDB Length = 864 Score = 27.5 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 11/23 (47%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAF 34 + ++G GK+ VL F F Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDF 56 >3L43-A nrPDB Length = 319 Score = 27.5 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 11/23 (47%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAF 34 + ++G GK+ VL F F Sbjct: 47 IAVVGGQSAGKSSVLENFVGRDF 69 >2X2E-A nrPDB Length = 353 Score = 27.5 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 11/23 (47%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAF 34 + ++G GK+ VL F F Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDF 56 >2AKA-B nrPDB Length = 299 Score = 27.5 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 11/23 (47%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAF 34 + ++G GK+ VL F F Sbjct: 29 IAVVGGQSAGKSSVLENFVGRDF 51 >5UBV-A nrPDB Length = 246 Score = 27.5 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIK 59 +LL+G G GKT +L R F G +F V + K+++ Sbjct: 42 VLLVGPPGTGKT-LLARAVAGEAGVPFFYMSGSEFDEIYVGVGAKRVR 88 >6HCM-k1 nrPDB Length = 599 Score = 27.5 bits (60), Expect = 4.1, Method: Composition-based stats. Identities = 6/43 (13%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTT--FISTIGIDFKIKTVE 52 ++++G++G GKT + + + + + +K + + Sbjct: 375 MVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKIS 417 >6H7G-A nrPDB Length = 346 Score = 27.5 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 3/24 (12%) Query: 11 KLLLIG---DSGVGKTCVLFRFSD 31 K ++IG DSG GK+ + R + Sbjct: 6 KTVVIGLAADSGCGKSTFMRRMTS 29 >5AJ2-A nrPDB Length = 355 Score = 27.5 bits (60), Expect = 4.2, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 13/19 (68%) Query: 12 LLLIGDSGVGKTCVLFRFS 30 L+ G+SG GK+ +L R + Sbjct: 165 CLIEGESGKGKSTLLQRIA 183 >6MFU-A nrPDB Length = 225 Score = 27.5 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 12/22 (54%) Query: 12 LLLIGDSGVGKTCVLFRFSDDA 33 L++ G SG GK+ +L + Sbjct: 22 LVICGPSGTGKSTLLKTLFESQ 43 >5DO7-A nrPDB Length = 666 Score = 27.5 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 7/15 (46%), Positives = 11/15 (73%) Query: 12 LLLIGDSGVGKTCVL 26 + ++G SG GKT +L Sbjct: 82 MCILGSSGSGKTTLL 96 >5A3F-A nrPDB Length = 754 Score = 27.5 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 11/23 (47%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAF 34 + ++G GK+ VL F F Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDF 56 >4XGL-A nrPDB Length = 379 Score = 27.5 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 35/95 (36%), Gaps = 11/95 (11%) Query: 65 TAGQERFHTITTSYYRGAMGIM-------LVYD-ITNGKSFENISK---WLRNIDEHANE 113 G +++ T + + +V D + K F + + L + + A Sbjct: 173 IDGGDQYRKTTPQELKRFENFIKSRPPFDVVIDGLNVAKMFPKVRESQLLLNVVSQLAKR 232 Query: 114 DVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRF 148 ++ ++LG K + + + E++ ++ F Sbjct: 233 NLRLLVLGRKHMLRRSSQWSRDEMEEVQKQASCFF 267 >5L3R-A nrPDB Length = 301 Score = 27.5 bits (60), Expect = 4.4, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 30/95 (31%), Gaps = 34/95 (35%) Query: 12 LLLIGDSGVGKTCV---LFRFSDDAFNT-------TFIS------------------TIG 43 +LL G GVGKT V L + + + T G Sbjct: 109 ILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAG 168 Query: 44 IDFKIKTVELQG------KKIKLQIWDTAGQERFH 72 D K + QG + + I DTAG+ + Sbjct: 169 TDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQID 203 >5D0U-A nrPDB Length = 714 Score = 27.5 bits (60), Expect = 4.4, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 13/19 (68%) Query: 12 LLLIGDSGVGKTCVLFRFS 30 L+ +G++G GKT + ++ Sbjct: 57 LVFVGETGSGKTTQIPQYV 75 >4V6W-Az nrPDB Length = 844 Score = 27.5 bits (60), Expect = 4.4, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 9/104 (8%) Query: 22 KTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRG 81 K+ + + F + I + E + K + + D+ G F + T+ R Sbjct: 71 KSTAISMY----FEVEEKDLVFITHPDQR-EKECKGFLINLIDSPGHVDFSSEVTAALRV 125 Query: 82 AMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCD 125 G ++V D +G + + + I E +L NK D Sbjct: 126 TDGALVVVDCVSGVCVQTETVLRQAIAERIKP----ILFMNKMD 165 >2QU8-A nrPDB Length = 228 Score = 27.5 bits (60), Expect = 4.5, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 57/171 (33%), Gaps = 27/171 (15%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVEL---QGKKIKLQIWDTAGQ 68 ++L G VGK+ + S + S F K + + K K QI DT G Sbjct: 32 IILSGAPNVGKSSFMNIVSRANVDVQSYS-----FTTKNLYVGHFDHKLNKYQIIDTPGL 86 Query: 69 E----------RFHTITTSYYRGAMGIMLVYDITNG--KSFENISKWLRNIDEHANEDVE 116 TIT + I+ + DI+ + + +I + Sbjct: 87 LDRAFENRNTIEMTTITALAHING-VILFIIDISEQCGLTIKEQINLFYSIKSVFSNKSI 145 Query: 117 RMLLGNKCDMDDKRVVPKGKGEQIAR-----EHGIRFFETSAKANINIEKA 162 + NK D + + I + ++ I+F S + +E+A Sbjct: 146 VIGF-NKIDKCNMDSLSIDNKLLIKQILDNVKNPIKFSSFSTLTGVGVEQA 195 >6DLV-b nrPDB Length = 748 Score = 27.5 bits (60), Expect = 4.6, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 11/23 (47%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAF 34 + ++G GK+ VL F F Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDF 56 >2PZF-A nrPDB Length = 228 Score = 27.5 bits (60), Expect = 4.6, Method: Composition-based stats. Identities = 7/26 (26%), Positives = 12/26 (46%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTT 37 L + G +G GKT +L + + Sbjct: 37 LAVAGSTGAGKTSLLMMIMGELEPSE 62 >4LJ8-A nrPDB Length = 339 Score = 27.1 bits (59), Expect = 4.7, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 14/25 (56%) Query: 13 LLIGDSGVGKTCVLFRFSDDAFNTT 37 L +G +GVGKT + + F+T Sbjct: 77 LFLGPTGVGKTELAKTLAATLFDTE 101 >4WZ6-A nrPDB Length = 290 Score = 27.1 bits (59), Expect = 4.7, Method: Composition-based stats. Identities = 7/26 (26%), Positives = 12/26 (46%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTT 37 L + G +G GKT +L + + Sbjct: 67 LAVAGSTGAGKTSLLMMIMGELEPSE 92 >4ROU-B nrPDB Length = 310 Score = 27.1 bits (59), Expect = 4.8, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 35/95 (36%), Gaps = 11/95 (11%) Query: 65 TAGQERFHTITTSYYRGAMGIM-------LVYD-ITNGKSFENISK---WLRNIDEHANE 113 G +++ T + + +V D + K F + + L + + A Sbjct: 104 IDGGDQYRKTTPQELKRFENFIKSRPPFDVVIDGLNVAKMFPKVRESQLLLNVVSQLAKR 163 Query: 114 DVERMLLGNKCDMDDKRVVPKGKGEQIAREHGIRF 148 ++ ++LG K + + + E++ ++ F Sbjct: 164 NLRLLVLGRKHMLRRSSQWSRDEMEEVQKQASCFF 198 >1OXV-A nrPDB Length = 353 Score = 27.1 bits (59), Expect = 4.9, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 4/45 (8%) Query: 14 LIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKI 58 ++G SG GKT + + + T + F + V GK I Sbjct: 36 ILGPSGAGKTTFMRIIAGLDVPS----TGELYFDDRLVASNGKLI 76 >1G29-1 nrPDB Length = 372 Score = 27.1 bits (59), Expect = 4.9, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Query: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGI 44 M+ + D F ++L+G SG GKT L + + IG Sbjct: 22 MSLEVKDGEF-MILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGD 64 >5KST-A nrPDB Length = 270 Score = 27.1 bits (59), Expect = 5.0, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 18/41 (43%), Gaps = 3/41 (7%) Query: 70 RFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEH 110 F + +Y + D+T ++ EN+++W + H Sbjct: 220 DFDAVRNTYISITP---IHVDLTRYQALENVTRWTDRLTAH 257 >5L22-B nrPDB Length = 572 Score = 27.1 bits (59), Expect = 5.1, Method: Composition-based stats. Identities = 6/15 (40%), Positives = 11/15 (73%) Query: 12 LLLIGDSGVGKTCVL 26 + +IG SG GK+ ++ Sbjct: 362 VAIIGPSGSGKSSLV 376 >5GKO-A nrPDB Length = 671 Score = 27.1 bits (59), Expect = 5.1, Method: Composition-based stats. Identities = 5/16 (31%), Positives = 11/16 (68%) Query: 12 LLLIGDSGVGKTCVLF 27 + ++G SG GK+ ++ Sbjct: 46 VAIVGQSGSGKSTLMN 61 >4HUQ-A nrPDB Length = 290 Score = 27.1 bits (59), Expect = 5.1, Method: Composition-based stats. Identities = 6/18 (33%), Positives = 12/18 (66%) Query: 12 LLLIGDSGVGKTCVLFRF 29 L +IG +G GK+ ++ + Sbjct: 36 LAIIGHTGSGKSTLIQQL 53 >6HE4-H nrPDB Length = 267 Score = 27.1 bits (59), Expect = 5.1, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV 51 +LL G G GKT +L + + TFI +G +F K + Sbjct: 56 VLLYGPPGTGKT-LLAKAVANQTRATFIRVVGSEFVQKYI 94 >4F4J-A nrPDB Length = 202 Score = 27.1 bits (59), Expect = 5.2, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKI-KTVELQGKKIKLQIWD 64 +++ G SG GK+ +L + + +F ++ + + E+ GK D Sbjct: 20 IVISGPSGTGKSTLLKKLFA-EYPDSFGFSVPSTTRTPRAGEVNGKDYNFVSVD 72 >6HE9-H nrPDB Length = 390 Score = 27.1 bits (59), Expect = 5.3, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV 51 +LL G G GKT +L + + TFI +G +F K + Sbjct: 170 VLLYGPPGTGKT-LLAKAVANQTRATFIRVVGSEFVQKYI 208 >6DJQ-A nrPDB Length = 391 Score = 27.1 bits (59), Expect = 5.3, Method: Composition-based stats. Identities = 6/23 (26%), Positives = 11/23 (47%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAF 34 ++++G GK+ VL F Sbjct: 48 IVVVGSQSSGKSSVLENIVGRDF 70 >5GM6-Y nrPDB Length = 876 Score = 27.1 bits (59), Expect = 5.4, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 1/27 (3%) Query: 12 LLLIGDSGVGKTCVLFRF-SDDAFNTT 37 L+++G++G GKT L ++ +D F Sbjct: 242 LIIMGETGSGKTTQLPQYLVEDGFTDQ 268 >4C3Z-A nrPDB Length = 266 Score = 27.1 bits (59), Expect = 5.4, Method: Composition-based stats. Identities = 5/19 (26%), Positives = 10/19 (52%) Query: 12 LLLIGDSGVGKTCVLFRFS 30 + ++G G GK+ +L Sbjct: 59 VAVVGQVGCGKSSLLSALL 77 >2XSZ-A nrPDB Length = 367 Score = 27.1 bits (59), Expect = 5.4, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNT-TFISTIGIDFKIKTVE 52 +LL G G GKT + + + + F +G + ++ Sbjct: 80 VLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIK 121 >2CBZ-A nrPDB Length = 237 Score = 27.1 bits (59), Expect = 5.4, Method: Composition-based stats. Identities = 5/19 (26%), Positives = 10/19 (52%) Query: 12 LLLIGDSGVGKTCVLFRFS 30 + ++G G GK+ +L Sbjct: 34 VAVVGQVGCGKSSLLSALL 52 >6BZR-B nrPDB Length = 251 Score = 27.1 bits (59), Expect = 5.7, Method: Composition-based stats. Identities = 5/15 (33%), Positives = 11/15 (73%) Query: 11 KLLLIGDSGVGKTCV 25 K+ ++G +G GK+ + Sbjct: 42 KVGIVGRTGAGKSSL 56 >5I8Q-A nrPDB Length = 767 Score = 27.1 bits (59), Expect = 5.7, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 13/19 (68%) Query: 12 LLLIGDSGVGKTCVLFRFS 30 ++ +G++G GKT + +F Sbjct: 112 MVFVGETGSGKTTQIPQFV 130 >4ZIR-B nrPDB Length = 268 Score = 27.1 bits (59), Expect = 5.9, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 15/39 (38%), Gaps = 11/39 (28%) Query: 4 KTYDLLFK-----------LLLIGDSGVGKTCVLFRFSD 31 D + K +++G +G GKT +L + Sbjct: 21 YNGDYVLKDVNAEFETGKIYVVVGKNGSGKTTLLKILAG 59 >5VHN-D nrPDB Length = 262 Score = 27.1 bits (59), Expect = 6.0, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIK 49 +L+ G G GKT + + FI +G +F K Sbjct: 58 VLMYGPPGCGKTMLAKAVAHHT-TAAFIRVVGSEFVQK 94 >2YZ2-A nrPDB Length = 266 Score = 27.1 bits (59), Expect = 6.0, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 11/48 (22%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIK 59 LL+ G++G GK+ +L + T G V G++ K Sbjct: 36 LLVAGNTGSGKSTLL-QIVAGLI----EPTSGD------VLYDGERKK 72 >5X41-A nrPDB Length = 280 Score = 26.7 bits (58), Expect = 6.2, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 11/16 (68%) Query: 12 LLLIGDSGVGKTCVLF 27 L ++G +G GK+ +L Sbjct: 34 LAILGPNGAGKSTLLL 49 >6QI8-A nrPDB Length = 456 Score = 26.7 bits (58), Expect = 6.3, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNT-TFISTIGIDFKIKTVE 52 +LL G G GKT + + + + F +G + ++ Sbjct: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIK 107 >5W76-A nrPDB Length = 385 Score = 26.7 bits (58), Expect = 6.4, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 35/126 (27%), Gaps = 29/126 (23%) Query: 21 GKTCVLFRFSD----------------DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64 GKT + + D GI VE + + D Sbjct: 16 GKTTLTAAITKVLAEKGQAEFKAYDQIDKAPEEKER--GITISTAHVEYETENRHYAHVD 73 Query: 65 TAGQERFHTITTSYYRGA---MGIMLVYDITNGKSFENISKWLRNIDEHANEDVE-RMLL 120 G + + GA G +LV +G + + +I V ++ Sbjct: 74 CPGHADY---VKNMITGAAQMDGAILVVSAADGP----MPQTREHILLARQVGVPYIVVF 126 Query: 121 GNKCDM 126 NK DM Sbjct: 127 LNKVDM 132 >5CA8-A nrPDB Length = 692 Score = 26.7 bits (58), Expect = 6.4, Method: Composition-based stats. Identities = 6/24 (25%), Positives = 12/24 (50%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFN 35 + + G GK+ +L R + F+ Sbjct: 61 ISVFGSQSTGKSTLLNRLFNTNFD 84 >3OZX-A nrPDB Length = 538 Score = 26.7 bits (58), Expect = 6.6, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Query: 14 LIGDSGVGKTCVLFRFSDDAFNTTFIST--IGIDFKIKTVELQGKKI 58 ++G +GVGKT VL + + +G D +K +GK+I Sbjct: 30 VLGKNGVGKTTVLKILAGEIIPNFGDPNSKVGKDEVLKRF--RGKEI 74 >5T0C-AD nrPDB Length = 418 Score = 26.7 bits (58), Expect = 6.6, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIK 49 +L+ G G GKT + + FI +G +F K Sbjct: 202 VLMYGPPGCGKTMLAKAVAHHT-TAAFIRVVGSEFVQK 238 >2GHI-A nrPDB Length = 260 Score = 26.7 bits (58), Expect = 6.7, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 3/23 (13%) Query: 12 LLLIGDSGVGKTC---VLFRFSD 31 L+G +G GK+ +L+RF D Sbjct: 49 CALVGHTGSGKSTIAKLLYRFYD 71 >5L4K-V nrPDB Length = 310 Score = 26.7 bits (58), Expect = 6.8, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 24/83 (28%), Gaps = 9/83 (10%) Query: 29 FSDDAFNTTFI---------STIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYY 79 F + G ++ V+ + L + G+ + Sbjct: 56 LMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSH 115 Query: 80 RGAMGIMLVYDITNGKSFENISK 102 G + DI +SFE +S+ Sbjct: 116 PGFGCWLSGVDINTQQSFEALSE 138 >5TV4-A nrPDB Length = 605 Score = 26.7 bits (58), Expect = 6.9, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 3/23 (13%) Query: 12 LLLIGDSGVGKTC---VLFRFSD 31 + L+G SG GK+ ++ RF D Sbjct: 395 VALVGRSGSGKSTIASLITRFYD 417 >2ZBK-A nrPDB Length = 389 Score = 26.7 bits (58), Expect = 7.1, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 14/26 (53%) Query: 62 IWDTAGQERFHTITTSYYRGAMGIML 87 I+D + + TI YYRG ++L Sbjct: 89 IYDALVSDEYPTIRDLYYRGKHSLLL 114 >6FKI-F nrPDB Length = 498 Score = 26.7 bits (58), Expect = 7.2, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 14/22 (63%) Query: 11 KLLLIGDSGVGKTCVLFRFSDD 32 K+ L G +GVGKT ++ ++ Sbjct: 167 KIGLFGGAGVGKTVLIMELINN 188 >5CDF-E nrPDB Length = 474 Score = 26.7 bits (58), Expect = 7.2, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 14/22 (63%) Query: 11 KLLLIGDSGVGKTCVLFRFSDD 32 K+ L G +GVGKT ++ ++ Sbjct: 146 KIGLFGGAGVGKTVLIMELINN 167 >2XND-D nrPDB Length = 467 Score = 26.7 bits (58), Expect = 7.2, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 14/22 (63%) Query: 11 KLLLIGDSGVGKTCVLFRFSDD 32 K+ L G +GVGKT ++ ++ Sbjct: 143 KIGLFGGAGVGKTVLIMELINN 164 >2W6I-D nrPDB Length = 528 Score = 26.7 bits (58), Expect = 7.2, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 14/22 (63%) Query: 11 KLLLIGDSGVGKTCVLFRFSDD 32 K+ L G +GVGKT ++ ++ Sbjct: 201 KIGLFGGAGVGKTVLIMELINN 222 >5EUM-A nrPDB Length = 258 Score = 26.7 bits (58), Expect = 7.4, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 3/23 (13%) Query: 12 LLLIGDSGVGKTC---VLFRFSD 31 + L+G SG GK+ ++ RF D Sbjct: 48 VALVGRSGSGKSTIANLVTRFYD 70 >3M6A-A nrPDB Length = 543 Score = 26.7 bits (58), Expect = 7.6, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 10/20 (50%) Query: 12 LLLIGDSGVGKTCVLFRFSD 31 L L G GVGKT + + Sbjct: 111 LCLAGPPGVGKTSLAKSIAK 130 >6FT6-s nrPDB Length = 520 Score = 26.7 bits (58), Expect = 7.8, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 31/99 (31%), Gaps = 12/99 (12%) Query: 37 TFISTIGIDFKIKTVELQGKKIKLQIW--DTAGQERFHTITTSY-------YRGAMGIML 87 + T D ++ EL + + D G+ +Y + I+ Sbjct: 122 EYEGTPSNDADVRDDELDVIDYNIDFYGEDVEGESELEKSRKAYDKIFKSVIDASDVILY 181 Query: 88 VYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDM 126 V D + +S + + +L+ NK D+ Sbjct: 182 VLDARDPESTRSRKVEEAVLQSQGKR---LILILNKVDL 217 >5AVO-A nrPDB Length = 304 Score = 26.3 bits (57), Expect = 8.3, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 17/48 (35%), Gaps = 1/48 (2%) Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK 57 KLLL G VGK + IG + + LQ K+ Sbjct: 1 MKLLLFGYGNVGK-AFRKLLHEKRSPELNDVIIGGIVTRRGIMLQDKE 47 >2QEN-A nrPDB Length = 350 Score = 26.3 bits (57), Expect = 8.4, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 13/21 (61%) Query: 13 LLIGDSGVGKTCVLFRFSDDA 33 LL+G VGK+ +L F ++ Sbjct: 35 LLLGIRRVGKSSLLRAFLNER 55 >1S4Q-A nrPDB Length = 228 Score = 26.3 bits (57), Expect = 8.5, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 17/49 (34%), Gaps = 1/49 (2%) Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60 ++L G S VGK+ + R + S + E+ G Sbjct: 26 VVLSGPSAVGKST-VVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHF 73 >5MVF-A nrPDB Length = 523 Score = 26.3 bits (57), Expect = 8.9, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 2/36 (5%) Query: 2 AKKTYDLLFK--LLLIGDSGVGKTCVLFRFSDDAFN 35 A + D K +LL+G GKT + + F Sbjct: 34 ALEDADFENKPMILLVGQYSTGKTTFIRYLLEQDFP 69 >3VQT-A nrPDB Length = 548 Score = 26.3 bits (57), Expect = 9.4, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 28/83 (33%), Gaps = 4/83 (4%) Query: 43 GIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK 102 GI ++ + + + DT G + F T ++V D G E ++ Sbjct: 85 GISVTTSVMQFPYRDRVVNLLDTPGHQDFSEDTYRVLTAVDSALVVIDAAKG--VEAQTR 142 Query: 103 WLRNIDEHANEDVERMLLGNKCD 125 L ++ M NK D Sbjct: 143 KLMDVCRMRA--TPVMTFVNKMD 163 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.159 0.466 Lambda K H 0.267 0.0491 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,846,680 Number of Sequences: 36641 Number of extensions: 395887 Number of successful extensions: 2939 Number of sequences better than 10.0: 539 Number of HSP's better than 10.0 without gapping: 569 Number of HSP's successfully gapped in prelim test: 178 Number of HSP's that attempted gapping in prelim test: 1760 Number of HSP's gapped (non-prelim): 821 length of query: 200 length of database: 10,336,785 effective HSP length: 92 effective length of query: 108 effective length of database: 6,965,813 effective search space: 752307804 effective search space used: 752307804 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 57 (26.3 bits)