BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P60766 (191 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3VHL-B nrPDB 384 e-107 3TH5-A nrPDB 275 7e-75 3RYT-C nrPDB 274 2e-74 2WKQ-A nrPDB 271 1e-73 1RYH-A nrPDB 269 7e-73 2ATX-A nrPDB 268 8e-73 2W2X-A nrPDB 268 1e-72 2Q3H-A nrPDB 234 2e-62 5C2K-A nrPDB 217 2e-57 5ZHX-e nrPDB 214 1e-56 5JCP-B nrPDB 210 4e-55 2WBL-C nrPDB 209 5e-55 5ZVP-A nrPDB 207 2e-54 4MIT-A nrPDB 207 2e-54 3BWD-D nrPDB 206 4e-54 2J0V-A nrPDB 206 5e-54 2NTY-C nrPDB 205 1e-53 5VCU-A nrPDB 204 2e-53 2FV8-A nrPDB 203 5e-53 3A58-B nrPDB 200 3e-52 5HZH-A nrPDB 199 4e-52 4U5X-A nrPDB 196 4e-51 2J1L-A nrPDB 185 1e-47 3REG-A nrPDB 159 7e-40 1M7B-A nrPDB 154 2e-38 1GWN-A nrPDB 154 2e-38 2REX-B nrPDB 133 4e-32 5CM8-B nrPDB 87 4e-18 4KLZ-A nrPDB 86 1e-17 2KE5-A nrPDB 84 3e-17 1ZC4-A nrPDB 84 4e-17 1YZU-A nrPDB 83 8e-17 6IF2-B nrPDB 83 8e-17 1WMS-A nrPDB 82 1e-16 1EK0-A nrPDB 82 2e-16 4LHX-A nrPDB 81 3e-16 4PHF-A nrPDB 80 4e-16 5SZI-A nrPDB 80 4e-16 2OCB-A nrPDB 80 6e-16 2OCY-C nrPDB 79 1e-15 3CPH-A nrPDB 79 1e-15 4QXA-A nrPDB 78 2e-15 2P5S-A nrPDB 76 8e-15 3CUE-F nrPDB 75 1e-14 1YZN-A nrPDB 75 1e-14 4M8N-E nrPDB 74 3e-14 1Z22-A nrPDB 74 3e-14 6O62-A nrPDB 74 3e-14 2RHD-A nrPDB 74 4e-14 2ERY-A nrPDB 74 4e-14 2FFQ-A nrPDB 74 4e-14 4KU4-A nrPDB 73 6e-14 1X3S-A nrPDB 73 7e-14 5LPN-A nrPDB 73 7e-14 4RKF-A nrPDB 73 8e-14 5WDQ-A nrPDB 73 1e-13 5SZJ-A nrPDB 72 1e-13 5XR6-A nrPDB 71 3e-13 2ERX-A nrPDB 71 3e-13 2F9L-A nrPDB 71 3e-13 4DXA-A nrPDB 71 3e-13 3L0I-B nrPDB 70 4e-13 2WWX-A nrPDB 70 5e-13 4WA7-A nrPDB 70 6e-13 2N1B-A nrPDB 70 7e-13 5SZH-B nrPDB 70 7e-13 5CLL-A nrPDB 70 7e-13 5UWI-A nrPDB 70 8e-13 2GF9-A nrPDB 69 9e-13 2G6B-A nrPDB 69 9e-13 2EW1-A nrPDB 69 9e-13 2F7S-A nrPDB 69 1e-12 4FMC-F nrPDB 69 2e-12 4G01-B nrPDB 69 2e-12 5LDD-C nrPDB 68 2e-12 2GIL-A nrPDB 68 3e-12 3CON-A nrPDB 67 3e-12 5LEF-A nrPDB 67 4e-12 5UHV-A nrPDB 67 4e-12 5FBL-B nrPDB 67 4e-12 3RAB-A nrPDB 67 7e-12 2ATV-A nrPDB 66 7e-12 6HUF-A nrPDB 66 7e-12 2IEY-A nrPDB 66 1e-11 2FG5-A nrPDB 66 1e-11 3OES-A nrPDB 65 1e-11 2IEZ-A nrPDB 65 1e-11 3T5G-A nrPDB 65 2e-11 4UJ4-A nrPDB 65 2e-11 3BC1-A nrPDB 65 2e-11 1Z0F-A nrPDB 64 3e-11 2IL1-A nrPDB 64 4e-11 5UB8-A nrPDB 64 4e-11 1D5C-A nrPDB 64 4e-11 1YVD-A nrPDB 64 5e-11 5YOZ-A nrPDB 63 7e-11 1ZBD-A nrPDB 63 7e-11 6IYB-A nrPDB 61 2e-10 5XOJ-A nrPDB 61 3e-10 1Z0A-A nrPDB 61 3e-10 3BFK-A nrPDB 61 4e-10 1Z06-A nrPDB 61 4e-10 2G77-B nrPDB 60 4e-10 3CPJ-B nrPDB 60 4e-10 3WYF-A nrPDB 60 4e-10 3TSO-A nrPDB 60 5e-10 3DZ8-A nrPDB 60 8e-10 5XC3-A nrPDB 59 9e-10 2A5J-A nrPDB 59 9e-10 3RAP-R nrPDB 59 1e-09 1TU4-A nrPDB 59 1e-09 2O52-A nrPDB 59 2e-09 4RKE-A nrPDB 58 2e-09 2HEI-A nrPDB 58 2e-09 5WDR-A nrPDB 58 3e-09 2HUP-A nrPDB 57 3e-09 3RWM-B nrPDB 56 1e-08 2GF0-A nrPDB 56 1e-08 2FN4-A nrPDB 55 2e-08 3PIR-A nrPDB 53 6e-08 2BMD-A nrPDB 53 9e-08 3CBQ-A nrPDB 52 1e-07 3E5H-A nrPDB 50 4e-07 4CZ2-A nrPDB 49 1e-06 4DJT-A nrPDB 48 2e-06 2NZJ-A nrPDB 48 3e-06 6FF8-A nrPDB 48 3e-06 3Q85-A nrPDB 47 4e-06 2CJW-A nrPDB 46 1e-05 2G3Y-A nrPDB 45 2e-05 5C1S-A nrPDB 44 4e-05 3C5C-A nrPDB 44 4e-05 3D6T-B nrPDB 42 2e-04 3IHW-A nrPDB 40 4e-04 3DPU-A nrPDB 40 4e-04 3CLV-A nrPDB 40 6e-04 6HLU-A nrPDB 35 0.019 3Q72-A nrPDB 35 0.026 2YC4-C nrPDB 32 0.14 4NK4-A nrPDB 30 0.76 4B6L-A nrPDB 30 0.76 5IRR-A nrPDB 29 1.4 3ZH9-B nrPDB 28 2.8 2IWR-A nrPDB 28 3.5 4PQG-A nrPDB 27 4.3 4M0X-A nrPDB 26 8.7 >3VHL-B nrPDB Length = 195 Score = 384 bits (985), Expect = e-107, Method: Compositional matrix adjust. Identities = 186/187 (99%), Positives = 186/187 (99%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 MQTIKCVVVGDGAVGK CLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG Sbjct: 8 MQTIKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 67 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR 120 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR Sbjct: 68 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR 127 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP 180 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP Sbjct: 128 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP 187 Query: 181 EPKKSRR 187 EPKKSRR Sbjct: 188 EPKKSRR 194 >3TH5-A nrPDB Length = 204 Score = 275 bits (704), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 127/176 (72%), Positives = 147/176 (83%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 Q IKCVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAGQ Sbjct: 29 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQ 88 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 EDYDRLRPLSYPQTDVFL+CFS+VSP+SFENV+ KW PE+ HHCP TP +LVGT++DLRD Sbjct: 89 EDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRD 148 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 D TIEKL + K PIT +A+++ AVKY+ECSALTQ+GLK VFDEAI A L Sbjct: 149 DKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 204 >3RYT-C nrPDB Length = 180 Score = 274 bits (700), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 127/177 (71%), Positives = 147/177 (83%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 MQ IKCVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAG Sbjct: 4 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 63 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR 120 EDYDRLRPLSYPQTDVFL+CFS+VSP+SFENV+ KW PE+ HHCP TP +LVGT++DLR Sbjct: 64 LEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR 123 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 DD TIEKL + K PIT +A+++ AVKY+ECSALTQ+GLK VFDEAI A L Sbjct: 124 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 180 >2WKQ-A nrPDB Length = 332 Score = 271 bits (694), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 125/179 (69%), Positives = 147/179 (82%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + IKCVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAG Sbjct: 154 ELIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGL 213 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 EDYDRLRPLSYPQTDVFL+CFS+VSP+SF +V+ KW PE+ HHCP TP +LVGT++DLRD Sbjct: 214 EDYDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHCPNTPIILVGTKLDLRD 273 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP 180 D TIEKL + K PIT +A+++ AVKY+ECSALTQ+GLK VFDEAI A L PP Sbjct: 274 DKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP 332 >1RYH-A nrPDB Length = 203 Score = 269 bits (687), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 130/199 (65%), Positives = 150/199 (75%), Gaps = 19/199 (9%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 MQ IKCVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAG Sbjct: 3 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 62 Query: 61 QEDYDRLRPLSYPQT-------------------DVFLVCFSVVSPSSFENVKEKWVPEI 101 QEDYDRLRPLSYPQT DVFL+CFS+VSP+SFENV+ KW PE+ Sbjct: 63 QEDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEV 122 Query: 102 THHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALT 161 HHCP TP +LVGT++DLRDD TIEKL + K PIT +A+++ AVKY+ECSALT Sbjct: 123 RHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALT 182 Query: 162 QKGLKNVFDEAILAALEPP 180 Q+GLK VFDEAI A L PP Sbjct: 183 QRGLKTVFDEAIRAVLCPP 201 >2ATX-A nrPDB Length = 194 Score = 268 bits (686), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 124/176 (70%), Positives = 148/176 (84%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63 +KCVVVGDGAVGKTCLL+SY + FP EYVPTVFD+YAV+V +GG+ Y LGL+DTAGQED Sbjct: 19 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 78 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDP 123 YDRLRPLSYP TDVFL+CFSVV+P+SF+NVKE+WVPE+ + P PFLL+GTQIDLRDDP Sbjct: 79 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDP 138 Query: 124 STIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 T+ +L K+KPI E +KLA+++ A YVECSALTQKGLK VFDEAI+A L P Sbjct: 139 KTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 194 >2W2X-A nrPDB Length = 185 Score = 268 bits (685), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 125/178 (70%), Positives = 146/178 (82%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 Q IKCVVVGD AVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ +P LGL+DTAGQ Sbjct: 8 QAIKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQ 67 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 EDYDRLRPLSYPQTDVFL+CFS+VSP+S+ENV+ KW PE+ HHCP TP +LVGT++DLRD Sbjct: 68 EDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLRD 127 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 D TIEKL + K PIT LA+++ +VKY+ECSALTQ+GLK VFDEAI A L P Sbjct: 128 DKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVLCP 185 >2Q3H-A nrPDB Length = 201 Score = 234 bits (596), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 107/175 (61%), Positives = 137/175 (78%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63 +KCV+VGDGAVGKT L++SYTTN +P+EY+PT FDN++ V + G P L L DTAGQ++ Sbjct: 21 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDE 80 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDP 123 +D+LRPL Y TD+FL+CFSVVSPSSF+NV EKWVPEI HCPK P +LVGTQ DLR+D Sbjct: 81 FDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDV 140 Query: 124 STIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 + +L K K+KP+ E A+ LA ++KA Y+ECSALTQK LK VFD AI+A ++ Sbjct: 141 KVLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFDAAIVAGIQ 195 >5C2K-A nrPDB Length = 415 Score = 217 bits (553), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 100/187 (53%), Positives = 130/187 (69%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY + + G+ L L+DTAGQEDY Sbjct: 14 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 73 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 124 DRLRPLSYP TDV L+CFS+ SP S EN+ EKW PE+ H CP P +LVG + DLR+D Sbjct: 74 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 133 Query: 125 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKK 184 T +LAK KQ+P+ PE +A + A Y+ECSA T+ G++ VF+ A AAL+ KK Sbjct: 134 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGKK 193 Query: 185 SRRCVLL 191 C++L Sbjct: 194 KSGCLVL 200 >5ZHX-e nrPDB Length = 198 Score = 214 bits (546), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 99/186 (53%), Positives = 129/186 (69%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY + + G+ L L+DTAGQEDY Sbjct: 12 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 71 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 124 DRLRPLSYP TDV L+CFS+ SP S EN+ EKW PE+ H CP P +LVG + DLR+D Sbjct: 72 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 131 Query: 125 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKK 184 T +LAK KQ+P+ PE +A + A Y+ECSA T+ G++ VF+ A AAL+ KK Sbjct: 132 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGKK 191 Query: 185 SRRCVL 190 C++ Sbjct: 192 KSGCLV 197 >5JCP-B nrPDB Length = 419 Score = 210 bits (534), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 96/174 (55%), Positives = 123/174 (70%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K V+VGDGA GKTCLLI + ++FP YVPTVF+NY + + G+ L L+DTAGQEDY Sbjct: 245 KLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 304 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 124 DRLRPLSYP TDV L+CFS+ SP S EN+ EKW PE+ H CP P +LVG + DLR+D Sbjct: 305 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 364 Query: 125 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 T +LAK KQ+P+ PE +A + A Y+ECSA T+ G++ VF+ A AAL+ Sbjct: 365 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 418 >2WBL-C nrPDB Length = 180 Score = 209 bits (533), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 97/176 (55%), Positives = 129/176 (73%), Gaps = 2/176 (1%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63 IKCV VGDGAVGKTC+LISYT N FP++YVPTVFDN++ V++ G LGL+DTAGQED Sbjct: 7 IKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQED 66 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDP 123 Y+RLRPLSY DVFL+ FS++S +S+EN+ +KW+PE+ H+ P P +LVGT++DLRDD Sbjct: 67 YNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKLDLRDDK 126 Query: 124 STIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 ++ IT E+L + + AV+Y+ECS+ TQ+ +K VFD AI AL P Sbjct: 127 QFLKD--HPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVALRP 180 >5ZVP-A nrPDB Length = 181 Score = 207 bits (527), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 96/173 (55%), Positives = 123/173 (71%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K V+VGDGA GKTCLLI + FP YVPTVF+NY V + G+ L L+DTAGQEDY Sbjct: 7 KLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDY 66 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 124 DRLRPLSYP + V L+CF++ SP S +NV+EKW+ E+ H C P +LVG + DLR DP Sbjct: 67 DRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKDLRHDPK 126 Query: 125 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 TIE+L K QKP+TPE E++ + + A KY+ECSA T +G++ VF+ A AAL Sbjct: 127 TIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAAL 179 >4MIT-A nrPDB Length = 186 Score = 207 bits (527), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 95/175 (54%), Positives = 123/175 (70%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62 +IK VVVGDGAVGKTCLLISY+ KFP +Y+PTVFDNY V++ G L L+DTAG E Sbjct: 10 SIKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTAGTRQIQLALWDTAGLE 69 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDD 122 +YD+LRPLSY +FL+CFSV S S++NV KW PE+ H PK P +LVGT++D R+D Sbjct: 70 EYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVGTKLDTRND 129 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 P+ +++L + I E+L +KAVKY+ECSA T + LK VFDEA+ L Sbjct: 130 PAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAVKTVL 184 >3BWD-D nrPDB Length = 182 Score = 206 bits (525), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 96/176 (54%), Positives = 128/176 (72%), Gaps = 2/176 (1%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63 IKCV VGDGAVGKTCLLISYT+N FP++YVPTVFDN++ V++ G LGL+DTAGQED Sbjct: 9 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQED 68 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDP 123 Y+RLRPLSY DVF++ FS++S +S+ENV +KW+PE+ H+ P P +LVGT++DLRDD Sbjct: 69 YNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDK 128 Query: 124 STIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 + PIT E+L + + A Y+ECS+ +Q+ +K VFD AI L+P Sbjct: 129 QFF--IDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVLQP 182 >2J0V-A nrPDB Length = 212 Score = 206 bits (524), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 94/181 (51%), Positives = 128/181 (70%), Gaps = 4/181 (2%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63 IKCV VGDGAVGKTC+LI YT+NKFP++Y+PTVFDN++ V + G+ LGL+DTAGQED Sbjct: 10 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWDTAGQED 69 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDP 123 Y RLRPLSY D+F++ FS++S +S+ENV +KW+PE+ P P +LVGT++DLRDD Sbjct: 70 YSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRDDK 129 Query: 124 STIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPK 183 + + IT E+L + + A Y+ECS+ TQ+ +K VFD AI L+PP K Sbjct: 130 GYLA----DHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRK 185 Query: 184 K 184 + Sbjct: 186 E 186 >2NTY-C nrPDB Length = 180 Score = 205 bits (521), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 95/176 (53%), Positives = 128/176 (72%), Gaps = 2/176 (1%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63 IKCV VGDGAVGKTC+LISYT+N FP++YVPTVFDN++ V++ G LGL+DTAGQED Sbjct: 7 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQED 66 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDP 123 Y+RLRPLSY DVF++ FS++S +S+ENV +KW+PE+ H+ P P +LVGT++DLRDD Sbjct: 67 YNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDK 126 Query: 124 STIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 + PIT E+L + + + Y+ECS+ TQ+ +K VFD AI L+P Sbjct: 127 QFF--IDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVLQP 180 >5VCU-A nrPDB Length = 208 Score = 204 bits (520), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 100/200 (50%), Positives = 135/200 (67%), Gaps = 9/200 (4%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 M++IKCVVVGDGAVGKT LLI+Y++ FP +YVPTVFDNY + G ++ L+DTAG Sbjct: 9 MESIKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYNKNIPYGDGIVSIALYDTAG 68 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR 120 QEDYDRLRPLSYP TDVFLVCFS+ +P+S EN KW E+ H+ P TP +LVGT++DL+ Sbjct: 69 QEDYDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHYNPDTPIVLVGTKLDLK 128 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE-- 178 D ++KL + K P+T E +++ +KA Y+ECSA T + L F+ AI A++ Sbjct: 129 KDEEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAMKQR 188 Query: 179 ----PPEP---KKSRRCVLL 191 PP + ++C LL Sbjct: 189 LKDAPPTANARNQKKKCQLL 208 >2FV8-A nrPDB Length = 207 Score = 203 bits (516), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 94/174 (54%), Positives = 123/174 (70%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K VVVGDGA GKTCLLI ++ ++FP YVPTVF+NY + + G+ L L+DTAGQEDY Sbjct: 27 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 86 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 124 DRLRPLSYP TDV L+CFSV SP S EN+ EKWVPE+ H CP P +LV + DLR D Sbjct: 87 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 146 Query: 125 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 +LA+ KQ+P+ + +A ++A Y+ECSA T++G++ VF+ A AAL+ Sbjct: 147 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQ 200 >3A58-B nrPDB Length = 188 Score = 200 bits (508), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 91/173 (52%), Positives = 120/173 (69%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K V+VGDGA GKTCLLI + +FP YVPTVF+NY V + G L L+DTAGQEDY Sbjct: 12 KLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 124 DRLRPLSYP ++V L+CFS+ P S ENV+EKW+ E+ H C P +LVG ++DLR+DP Sbjct: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 Query: 125 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 TIE+L + Q+P+T + + +A + A Y ECSA T G++ VF+ A A+L Sbjct: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 >5HZH-A nrPDB Length = 332 Score = 199 bits (507), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 94/144 (65%), Positives = 112/144 (77%) Query: 37 FDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEK 96 D A + GG+P LGL+DTAG EDYDRLRPLSYPQTDVFL+CFS+VSP+SFENV+ K Sbjct: 189 IDEAAKELGSGGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAK 248 Query: 97 WVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVE 156 W PE+ HHCP TP +LVGT++DLRDD TIEKL + K PIT +A+++ AVKY+E Sbjct: 249 WYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLE 308 Query: 157 CSALTQKGLKNVFDEAILAALEPP 180 CSALTQ+GLK VFDEAI A L PP Sbjct: 309 CSALTQRGLKTVFDEAIRAVLCPP 332 Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 39/48 (81%), Positives = 42/48 (87%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGG 48 MQ IKCVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G Sbjct: 4 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG 51 >4U5X-A nrPDB Length = 178 Score = 196 bits (499), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 92/175 (52%), Positives = 125/175 (71%), Gaps = 2/175 (1%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63 IKCV VGDGAVGKTC+LI YT+NKFP++Y+PTVFDN++ V + G LGL+DTAG ED Sbjct: 6 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGLED 65 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDP 123 Y RLRPLSY DVF++ FS++S +S+ENV++KW+PE+ P P +LVGT++DLR+D Sbjct: 66 YSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLREDR 125 Query: 124 STIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 + + IT E E+L + + AV Y+ECS+ TQ+ +K VFD AI L+ Sbjct: 126 AYLAD--HPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 178 >2J1L-A nrPDB Length = 214 Score = 185 bits (469), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 82/177 (46%), Positives = 115/177 (64%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 ++++K V+VGDG GKT LL+ + FP Y PTVF+ Y V + + G+P L ++DTAG Sbjct: 32 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 91 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR 120 Q+DYDRLRPL YP V L+CF V SP+SF+N+ +W PE+ H C K P ++VG + DLR Sbjct: 92 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLR 151 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 D S + KL +N +P+T +++AR + AV Y+ECSA + VF EA AL Sbjct: 152 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 208 >3REG-A nrPDB Length = 194 Score = 159 bits (402), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 75/172 (43%), Positives = 113/172 (65%), Gaps = 10/172 (5%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + +K VVVGDGAVGKTCLL++++ + P+ YVPTVF+N++ + E + L L+DTAGQ Sbjct: 22 KALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILHLWDTAGQ 81 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 E+YDRLRPLSY +DV L+CF+V + +SF+N+ KW PEI H+ +LVG ++DLR Sbjct: 82 EEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYIDTAKTVLVGLKVDLRK 141 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173 D S +T + + L + L V Y+E S++ + GL VF++++ Sbjct: 142 DGS----------DDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSV 183 >1M7B-A nrPDB Length = 184 Score = 154 bits (390), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 75/180 (41%), Positives = 111/180 (61%), Gaps = 3/180 (1%) Query: 2 QTIKC--VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 Q +KC VVVGD GKT LL + + FP YVPTVF+NY + I + L L+DT+ Sbjct: 4 QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTS 63 Query: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDL 119 G YD +RPLSYP +D L+CF + P + ++V +KW EI CP T LLVG + DL Sbjct: 64 GSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDL 123 Query: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSAL-TQKGLKNVFDEAILAALE 178 R D ST+ +L+ ++Q P++ + +A+ + A Y+ECSAL ++ ++++F A LA + Sbjct: 124 RTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVN 183 >1GWN-A nrPDB Length = 205 Score = 154 bits (389), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 75/180 (41%), Positives = 111/180 (61%), Gaps = 3/180 (1%) Query: 2 QTIKC--VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 Q +KC VVVGD GKT LL + + FP YVPTVF+NY + I + L L+DT+ Sbjct: 25 QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTS 84 Query: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDL 119 G YD +RPLSYP +D L+CF + P + ++V +KW EI CP T LLVG + DL Sbjct: 85 GSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDL 144 Query: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSAL-TQKGLKNVFDEAILAALE 178 R D ST+ +L+ ++Q P++ + +A+ + A Y+ECSAL ++ ++++F A LA + Sbjct: 145 RTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVN 204 >2REX-B nrPDB Length = 197 Score = 133 bits (335), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 70/179 (39%), Positives = 102/179 (56%), Gaps = 1/179 (0%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K V+VGD GKT +L + +P YVPTVF+NY + + L L+DT+G Y Sbjct: 12 KLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVELSLWDTSGSPYY 71 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 124 D +RPL Y +D L+CF + P + ++ +KW EI +CP T LL+G + DLR D S Sbjct: 72 DNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLIGCKTDLRTDLS 131 Query: 125 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALT-QKGLKNVFDEAILAALEPPEP 182 T+ +L+ KQ PI+ E +A+ L A Y+E SA T +K + ++F A + L P P Sbjct: 132 TLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTASMLCLNKPSP 190 >5CM8-B nrPDB Length = 203 Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 84/167 (50%), Gaps = 16/167 (9%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K ++VG G VGK+ L + + ++F +Y PT D+Y V++ GE + + DTAGQEDY Sbjct: 15 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDY 74 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI--THHCPKTPFLLVGTQIDLRDD 122 +R + + FL FS+ SF+ +E + +I + PFLLVG + DL D Sbjct: 75 AAIRDNYFRSGEGFLCVFSITDDESFQATQE-FREQILRVKNDESIPFLLVGNKCDLND- 132 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 K P + +L AV YVE SA T++ + VF Sbjct: 133 ------------KRKVPLSECQLRAQQWAVPYVETSAKTRENVDKVF 167 >4KLZ-A nrPDB Length = 173 Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 14/166 (8%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K V++G G VGK+ + + + +++FP ++ PT+ D Y + + I EP L + DTAGQ ++ Sbjct: 7 KLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEF 66 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKE-KWVPEITHHCPKTPFLLVGTQIDLRDDP 123 +R + F++C+S+ SF V+E K + TP +LVG + DL+ Sbjct: 67 TAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLK--- 123 Query: 124 STIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 + + +T E LAR+ + + E SA + + +VF Sbjct: 124 ---------QLRQVTKEEGLALAREF-SCPFFETSAAYRYYIDDVF 159 >2KE5-A nrPDB Length = 174 Score = 84.0 bits (206), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 15/167 (8%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K ++VG G VGK+ L + + ++F +Y PT D+Y V++ GE + + DTAG EDY Sbjct: 5 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 64 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKE--KWVPEITHHCPKTPFLLVGTQIDLRDD 122 +R + + FL+ FS+ SF E + + + K P L+VG + DL + Sbjct: 65 AAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEE- 123 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 +Q P+ E A A + V+YVE SA T+ + VF Sbjct: 124 ---------RRQVPV--EEARSKAEEW-GVQYVETSAKTRANVDKVF 158 >1ZC4-A nrPDB Length = 175 Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 18/168 (10%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K ++VG G VGK+ L + + ++F +Y PT D+Y V++ GE + + DTAG EDY Sbjct: 8 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 67 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSF---ENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 +R + + FL FS+ SF + +E+ + PFLLVG + DL D Sbjct: 68 AAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILR--VKEDENVPFLLVGNKSDLED 125 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 + AKN+ + V YVE SA T+ + VF Sbjct: 126 KRQVSVEEAKNRAEQWN-------------VNYVETSAKTRANVDKVF 160 >1YZU-A nrPDB Length = 170 Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 16/169 (9%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM-IGGEPYTLGLFDTAGQ 61 + K V++G+G VGKT L++ Y NKF +++ T+ ++ + IGG+ L ++DTAGQ Sbjct: 6 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 65 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL-LVGTQIDLR 120 E + L P+ Y ++ ++ + + SF+ VK WV E+ L +VG +IDL Sbjct: 66 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVK-NWVKELRKMLGNEICLCIVGNKIDLE 124 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 K++ ++ + AE A + A K+ SA KG++ +F Sbjct: 125 ------------KERHVSIQEAESYAESVGA-KHYHTSAKQNKGIEELF 160 >6IF2-B nrPDB Length = 186 Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 18/184 (9%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63 K +++GD VGK+ LL+ + N F Y+ T+ ++ + TV I GE L ++DTAG E Sbjct: 16 KLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGLER 75 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDP 123 + + Y T +V + V S SF NVK +W+ EI +C +LVG + DDP Sbjct: 76 FRTITSTYYRGTHGVIVVYDVTSAESFVNVK-RWLHEINQNCDDVCRILVGNK---NDDP 131 Query: 124 STIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFD---EAILAALEPP 180 ++K + E A K A + ++ E SA ++ +F+ E +L A + Sbjct: 132 ---------ERKVVETEDAYKFAGQM-GIQLFETSAKENVNVEEMFNCITELVLRAKKDN 181 Query: 181 EPKK 184 K+ Sbjct: 182 LAKQ 185 >1WMS-A nrPDB Length = 177 Score = 82.0 bits (201), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 24/182 (13%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV---FDNYAVTVMIGGEPYTLGLFDTAG 60 K +++GDG VGK+ L+ Y TNKF ++ T+ F N + V G T+ ++DTAG Sbjct: 8 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEV--DGHFVTMQIWDTAG 65 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC----PKT-PFLLVGT 115 QE + LR Y +D L+ FSV SF+N+ W E ++ P++ PF+++G Sbjct: 66 QERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESFPFVILGN 124 Query: 116 QIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 +ID+ ++ ++ E A+ RD Y E SA + F+EA+ Sbjct: 125 KIDI-------------SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRR 171 Query: 176 AL 177 L Sbjct: 172 VL 173 >1EK0-A nrPDB Length = 170 Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 13/169 (7%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT-VMIGGEPYTLGLFDTAGQ 61 +IK V++G+ AVGK+ +++ + +N F PT+ + V I ++DTAGQ Sbjct: 3 SIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQ 62 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL-LVGTQIDLR 120 E + L P+ Y LV + V P SF + WV E+ K + LVG +ID+ Sbjct: 63 ERFASLAPMYYRNAQAALVVYDVTKPQSFIKARH-WVKELHEQASKDIIIALVGNKIDM- 120 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 L + ++ + E EKLA + K + + E SA T + + +VF Sbjct: 121 --------LQEGGERKVAREEGEKLAEE-KGLLFFETSAKTGENVNDVF 160 >4LHX-A nrPDB Length = 186 Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 43/167 (25%), Positives = 86/167 (51%), Gaps = 16/167 (9%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63 K +++GD VGKTC+L ++ + F S ++ T+ ++ + T+ + G+ L ++DTAGQE Sbjct: 12 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQER 71 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRDD 122 + + Y ++ + + + SF+N++ W+ I H +++G + D+ D Sbjct: 72 FRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHASADVEKMILGNKCDVND- 129 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 ++ ++ E EKLA D +K++E SA ++N F Sbjct: 130 -----------KRQVSKERGEKLALDY-GIKFMETSAKANINVENAF 164 >4PHF-A nrPDB Length = 184 Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 21/187 (11%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY---AVTVMIGGEPYTLGLFDTAG 60 +K +++GD VGKT L+ Y +K+ +Y T+ ++ VTV G + T+ ++DTAG Sbjct: 11 LKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVD-GDKVATMQVWDTAG 69 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC----PKT-PFLLVGT 115 QE + L Y D ++ + V + SSFEN+K W E H P+T PF+++G Sbjct: 70 QERFQSLGVAFYRGADCCVLVYDVTNASSFENIKS-WRDEFLVHANVNSPETFPFVILGN 128 Query: 116 QIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 +ID A+ +K ++ ++A++LA+ L + SA + F+E + Sbjct: 129 KID-----------AEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARS 177 Query: 176 ALEPPEP 182 AL+ + Sbjct: 178 ALQQNQA 184 >5SZI-A nrPDB Length = 209 Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 86/168 (51%), Gaps = 16/168 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 K +++GD VGKTC+L ++ + F S ++ T+ ++ + T+ + G+ L ++DTAGQE Sbjct: 11 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 70 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 + + Y ++ + + + SF+N++ W+ I H +++G + D+ D Sbjct: 71 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHASADVEKMILGNKCDVND 129 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 ++ ++ E EKLA D +K++E SA ++N F Sbjct: 130 ------------KRQVSKERGEKLALDY-GIKFMETSAKANINVENAF 164 >2OCB-A nrPDB Length = 180 Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 24/186 (12%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV---FDNYAVTVMIGGEPYTLGLFDTAG 60 +K +++GDG VGK+ L+ Y TNKF S+ T+ F N + V G TL ++DTAG Sbjct: 8 LKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEV--DGRFVTLQIWDTAG 65 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-----PKTPFLLVGT 115 QE + LR Y D L+ FSV SFEN+ W E ++ PF+++G Sbjct: 66 QERFKSLRTPFYRGADCCLLTFSVDDRQSFENLG-NWQKEFIYYADVKDPEHFPFVVLGN 124 Query: 116 QIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 ++D D + +T E A+ + Y+E SA + F+EA+ Sbjct: 125 KVDKED-------------RQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQ 171 Query: 176 ALEPPE 181 L E Sbjct: 172 VLAVEE 177 >2OCY-C nrPDB Length = 170 Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 17/168 (10%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 +K +++GD VGK+CLL+ + +KF ++ T+ ++ + TV I G+ L L+DTAGQE Sbjct: 4 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 63 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 + + Y ++ + V +F N+K+ W + H + LLVG + D+ Sbjct: 64 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLVGNKSDM-- 120 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 + + +T + E LA++L + ++E SA + +F Sbjct: 121 -----------ETRVVTADQGEALAKEL-GIPFIESSAKNDDNVNEIF 156 >3CPH-A nrPDB Length = 213 Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 17/168 (10%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 +K +++GD VGK+CLL+ + +KF ++ T+ ++ + TV I G+ L L+DTAGQE Sbjct: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 + + Y ++ + V +F N+K+ W + H + LLVG + D+ Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLVGNKSDM-- 137 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 + + +T + E LA++L + ++E SA + +F Sbjct: 138 -----------ETRVVTADQGEALAKEL-GIPFIESSAKNDDNVNEIF 173 >4QXA-A nrPDB Length = 208 Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 24/182 (13%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV---FDNYAVTVMIGGEPYTLGLFDTAG 60 K +++GDG VGK+ L+ Y TNKF S+ T+ F N + V G T+ ++DTAG Sbjct: 9 FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEV--DGHFVTMQIWDTAG 66 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC----PKT-PFLLVGT 115 E + LR Y +D L+ FSV SF+N+ W E ++ P++ PF+++G Sbjct: 67 LERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESFPFVILGN 125 Query: 116 QIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 + D+ K++ ++ E A+ +D Y E SA + F+EA+ Sbjct: 126 KTDI-------------KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRR 172 Query: 176 AL 177 L Sbjct: 173 IL 174 >2P5S-A nrPDB Length = 199 Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 10/157 (6%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63 K V+ GD AVGK+ L+ N+F T+ ++ + T+++ GE L L+DTAGQE Sbjct: 30 KIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQER 89 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT-PFLLVGTQIDLRDD 122 + + + + D L+ + V SF N++E WV I +T P +LVG + D+RD Sbjct: 90 FRSIAKSYFRKADGVLLLYDVTCEKSFLNIRE-WVDMIEDAAHETVPIMLVGNKADIRDT 148 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSA 159 +T QK + EKLA A+ + E SA Sbjct: 149 AAT------EGQKCVPGHFGEKLAMTYGAL-FCETSA 178 >3CUE-F nrPDB Length = 206 Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 88/168 (52%), Gaps = 16/168 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 K +++G+ VGK+CLL+ ++ + + ++Y+ T+ ++ + TV + G+ L ++DTAGQE Sbjct: 9 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 68 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPF-LLVGTQIDLRD 121 + + Y + ++ + V SF VK W+ EI + T LLVG + DL+D Sbjct: 69 RFRTITSSYYRGSHGIIIVYDVTDQESFNGVK-MWLQEIDRYATSTVLKLLVGNKCDLKD 127 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 ++ + + A++ A D + ++E SAL +++ F Sbjct: 128 ------------KRVVEYDVAKEFA-DANKMPFLETSALDSTNVEDAF 162 >1YZN-A nrPDB Length = 185 Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 88/168 (52%), Gaps = 16/168 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 K +++G+ VGK+CLL+ ++ + + ++Y+ T+ ++ + TV + G+ L ++DTAGQE Sbjct: 22 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 81 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPF-LLVGTQIDLRD 121 + + Y + ++ + V SF VK W+ EI + T LLVG + DL+D Sbjct: 82 RFRTITSSYYRGSHGIIIVYDVTDQESFNGVK-MWLQEIDRYATSTVLKLLVGNKCDLKD 140 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 ++ + + A++ A D + ++E SAL +++ F Sbjct: 141 ------------KRVVEYDVAKEFA-DANKMPFLETSALDSTNVEDAF 175 >4M8N-E nrPDB Length = 199 Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 17/172 (9%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 M+ K VV+G G VGK+ L + + F +Y PT+ D+Y V + + L + DTAG Sbjct: 4 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG 63 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT---PFLLVGTQI 117 E + +R L F + +S+ + S+F ++++ + E T P +LVG + Sbjct: 64 TEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQD--LREQILRVKDTDDVPMILVGNKC 121 Query: 118 DLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 DL D ++ + E + LAR ++E SA ++ + +F Sbjct: 122 DLED------------ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIF 161 >1Z22-A nrPDB Length = 168 Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/149 (32%), Positives = 68/149 (45%), Gaps = 14/149 (9%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQ 61 IK VVVG+GAVGK+ ++ Y F +Y T+ D + + E L L+DTAGQ Sbjct: 5 AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQ 64 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 E++D + Y ++ FS SFE + W ++ P LV +IDL D Sbjct: 65 EEFDAITKAYYRGAQACVLVFSTTDRESFEAIS-SWREKVVAEVGDIPTALVQNKIDLLD 123 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLK 150 D I E AE LA+ LK Sbjct: 124 DSC------------IKNEEAEGLAKRLK 140 >6O62-A nrPDB Length = 184 Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 87/170 (51%), Gaps = 16/170 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 +K ++VGD VGK+CLL+ + +KF ++ T+ ++ + T+ G+ L ++DTAGQE Sbjct: 15 MKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQE 74 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPK-TPFLLVGTQIDLRD 121 + + Y ++ + V SFENV E W +T H + LVG + D D Sbjct: 75 RFRTITTAYYRGAMGIVLIYDVTDSRSFENV-ENWFQTVTQHANEDAQIFLVGNKCD--D 131 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDE 171 + + + ++ E ++LA L V ++E SA + + + ++F E Sbjct: 132 EVN----------RQVSKEQGQELAAKLN-VPFLEASAKSNENVDSIFYE 170 >2RHD-A nrPDB Length = 175 Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 16/167 (9%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63 K +++GD VGK+CLL+ + + + Y+ T+ ++ + T+ + + L ++DTAGQE Sbjct: 11 KLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQER 70 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRDD 122 + + Y ++ + V SF+NVK+ W+ EI + LLVG + DL Sbjct: 71 FRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAMENVNKLLVGNKCDLV-- 127 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 ++ +T + +LA D +K++E SA ++ F Sbjct: 128 ----------SKRVVTSDEGRELA-DSHGIKFIETSAKNAYNVEQAF 163 >2ERY-A nrPDB Length = 172 Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 16/160 (10%) Query: 16 KTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQT 75 K+ L I + + F ++Y PT+ D+Y +I L + DTAGQE++ +R Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTG 77 Query: 76 DVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT--PFLLVGTQIDLRDDPSTIEKLAKNK 133 + FL+ FSV SFE + K+ +I + P +L+G + DL + Sbjct: 78 EGFLLVFSVTDRGSFEEIY-KFQRQILRVKDRDEFPMILIGNKADL------------DH 124 Query: 134 QKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173 Q+ +T E ++LAR LK V Y+E SA + + F E + Sbjct: 125 QRQVTQEEGQQLARQLK-VTYMEASAKIRMNVDQAFHELV 163 >2FFQ-A nrPDB Length = 171 Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 16/176 (9%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQED 63 K V +G+ +VGKT L+ + + F + Y T+ D + T+ + L L+DTAGQE Sbjct: 4 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 63 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHCPKTPFLLVGTQIDLRDD 122 + L P + V +V + + + +SF+ KW+ ++ T +LVG + DL D Sbjct: 64 FRSLIPSYIRDSTVAVVVYDITNLNSFQQT-SKWIDDVRTERGSDVIIMLVGNKTDLAD- 121 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 ++ IT E E+ A++L +V ++E SA T +K +F A LE Sbjct: 122 -----------KRQITIEEGEQRAKEL-SVMFIETSAKTGYNVKQLFRRVASALLE 165 >4KU4-A nrPDB Length = 206 Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 37/89 (41%), Positives = 52/89 (58%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62 T K ++G+G VGKT L ++ T + F Y PT+ D+Y +I G P L + DTAGQE Sbjct: 14 TDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCVIDGIPSHLEILDTAGQE 73 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFE 91 +Y LR Q ++F++ F V SSFE Sbjct: 74 EYGALREQWIRQNELFVIVFDVTRRSSFE 102 >1X3S-A nrPDB Length = 195 Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 18/183 (9%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTA 59 + T+K +++G+ VGK+ LL+ +T + F E T+ ++ V T+ + G L ++DTA Sbjct: 13 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTA 72 Query: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPF--LLVGTQI 117 GQE + L P Y ++ + V +F + + W+ E+ +C + +LVG +I Sbjct: 73 GQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKI 131 Query: 118 DLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 D + + + K AR ++ ++E SA T G++ F+E + + Sbjct: 132 D-------------KENREVDRNEGLKFARK-HSMLFIEASAKTCDGVQCAFEELVEKII 177 Query: 178 EPP 180 + P Sbjct: 178 QTP 180 >5LPN-A nrPDB Length = 177 Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 85/168 (50%), Gaps = 18/168 (10%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63 K +++GD VGKTC+L ++ + F + ++ T+ ++ + TV + G+ L ++DTAGQE Sbjct: 13 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 72 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPK-TPFLLVGTQIDLRDD 122 + + Y ++ + + + SFEN+ KW+ I H + +L+G + D+ D Sbjct: 73 FHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDMDD- 130 Query: 123 PSTIEKLAKNKQKPITPE-TAEKLARDLKAVKYVECSALTQKGLKNVF 169 K + P+ E++AR+ +++ E SA ++ F Sbjct: 131 ------------KRVVPKGKGEQIARE-HGIRFFETSAKANINIEKAF 165 >4RKF-A nrPDB Length = 190 Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 16/172 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 K +++G+ +VGKT L Y + F S +V TV ++ V TV + L ++DTAG E Sbjct: 24 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGLE 83 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHCPKTPFLLVGTQIDLRD 121 Y + Y F++ + V + SF +V++ WV +I T+ +LVG + D+ D Sbjct: 84 RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQD-WVTQIKTYSWDNAQVILVGNKCDMED 142 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173 Q+ I+ E +LA L V++ E SA +K VF+ + Sbjct: 143 ------------QRVISFERGRQLADQL-GVEFFETSAKENVNVKAVFERLV 181 >5WDQ-A nrPDB Length = 170 Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 17/156 (10%) Query: 16 KTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQT 75 K+ L I N F EY PT+ D+Y V+I GE L + DTAGQE+Y +R Sbjct: 20 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 79 Query: 76 DVFLVCFSVVSPSSFENVKEKWVPEITH--HCPKTPFLLVGTQIDLRDDPSTIEKLAKNK 133 + FL F++ + SFE++ ++ +I P +LVG + D Sbjct: 80 EGFLCVFAINNTKSFEDI-HQYREQIKRVKDSDDVPMVLVGNKCDA-------------A 125 Query: 134 QKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 + + A+ LAR + Y+E SA T++G+++ F Sbjct: 126 ARTVESRQAQDLARSY-GIPYIETSAKTRQGVEDAF 160 >5SZJ-A nrPDB Length = 202 Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/168 (25%), Positives = 85/168 (50%), Gaps = 18/168 (10%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63 K +++GD VGKTC+L ++ + F + ++ T+ ++ + TV + G+ L ++DTAGQE Sbjct: 13 KLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 72 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPK-TPFLLVGTQIDLRDD 122 + + Y ++ + + + SFEN+ KW+ I H + +L+G + D+ D Sbjct: 73 FHTITTSYYRGAMGIMLVYDITNGKSFENI-SKWLRNIDEHANEDVERMLLGNKCDMDD- 130 Query: 123 PSTIEKLAKNKQKPITPE-TAEKLARDLKAVKYVECSALTQKGLKNVF 169 K + P+ E++AR+ +++ E SA ++ F Sbjct: 131 ------------KRVVPKGKGEQIARE-HGIRFFETSAKANINIEKAF 165 >5XR6-A nrPDB Length = 194 Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 17/184 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 K V++GD VGK+ LL +T N+F E T+ +A T + G+ ++DTAGQE Sbjct: 26 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQE 85 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 Y + Y L+ + V ++FEN +W+ E+ H P +L+G + DLR Sbjct: 86 RYRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHTDPNIVVMLIGNKCDLRH 144 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 + + E A+ A + +++ ++E SAL ++N F E +L + Sbjct: 145 LVA------------VKTEEAKAFA-ERESLYFMETSALDATNVENAFTE-VLTQIHKIV 190 Query: 182 PKKS 185 K+S Sbjct: 191 SKRS 194 >2ERX-A nrPDB Length = 172 Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 15/171 (8%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 + V G G VGK+ L++ + F Y+PTV D Y + TL + DT G + Sbjct: 5 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQF 64 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVK--EKWVPEITHHCPKTPFLLVGTQIDLRDD 122 ++ LS + F++ +S+ S S E +K + + EI P +LVG + D + Sbjct: 65 PAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCD--ES 122 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173 PS + + AE LAR K ++E SA +K +F E + Sbjct: 123 PS----------REVQSSEAEALARTWKCA-FMETSAKLNHNVKELFQELL 162 >2F9L-A nrPDB Length = 199 Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 3/118 (2%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63 K V++GD VGK+ LL +T N+F E T+ +A ++ + G+ ++DTAGQE Sbjct: 7 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 66 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT-PFLLVGTQIDLR 120 Y R+ Y L+ + + ++ENV E+W+ E+ H +LVG + DLR Sbjct: 67 YRRITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR 123 >4DXA-A nrPDB Length = 169 Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 17/172 (9%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 M+ K VV+G VGK+ L + + F +Y PT+ D+Y V + + L + DTAG Sbjct: 3 MREYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG 62 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT---PFLLVGTQI 117 E + +R L F + +S+ + S+F ++++ + E T P +LVG + Sbjct: 63 TEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQD--LREQILRVKDTDDVPMILVGNKC 120 Query: 118 DLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 DL D ++ + E + LAR ++E SA ++ + +F Sbjct: 121 DLED------------ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIF 160 >3L0I-B nrPDB Length = 199 Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 16/168 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 K +++GD VGK+CLL+ + + + Y+ T+ ++ + T+ + G+ L ++DTAGQE Sbjct: 34 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 93 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT-PFLLVGTQIDLRD 121 + + Y +V + V SF NVK+ W+ EI + + LLVG + DL Sbjct: 94 RFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGNKCDL-- 150 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 +K + TA++ A L + ++E SA ++ F Sbjct: 151 ----------TTKKVVDYTTAKEFADSL-GIPFLETSAKNATNVEQSF 187 >2WWX-A nrPDB Length = 175 Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 16/167 (9%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63 K +++GD VGK+CLL+ + + + Y+ T+ ++ + T+ + G+ L ++DTAGQE Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT-PFLLVGTQIDLRDD 122 + + Y +V + V SF NVK+ W+ EI + + LLVG + DL Sbjct: 70 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGIKCDL--- 125 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 +K + TA++ A L + ++E SA ++ F Sbjct: 126 ---------TTKKVVDYTTAKEFADSL-GIPFLETSAKNATNVEQSF 162 >4WA7-A nrPDB Length = 170 Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 17/156 (10%) Query: 16 KTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQT 75 K+ L I N F EY PT+ D+Y V+I GE L + DTAG E+Y +R Sbjct: 17 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGLEEYSAMRDQYMRTG 76 Query: 76 DVFLVCFSVVSPSSFENVKEKWVPEITH--HCPKTPFLLVGTQIDLRDDPSTIEKLAKNK 133 + FL F++ + SFE++ + +I P +LVG + DL PS Sbjct: 77 EGFLCVFAINNTKSFEDI-HHYREQIKRVKDSEDVPMVLVGNKCDL---PS--------- 123 Query: 134 QKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 + + + A+ LAR + ++E SA T++G+ + F Sbjct: 124 -RTVDTKQAQDLARSY-GIPFIETSAKTRQGVDDAF 157 >2N1B-A nrPDB Length = 261 Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 2/135 (1%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 62 K V+VGDG GKT + + T +F +YV T+ + + + P ++DTAGQE Sbjct: 52 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 111 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDD 122 + LR Y Q ++ F V S +++NV W ++ C P +L G ++D++D Sbjct: 112 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVLCGNKVDIKDR 170 Query: 123 PSTIEKLAKNKQKPI 137 + + +++K + Sbjct: 171 KVKAKSIVFHRKKNL 185 >5SZH-B nrPDB Length = 203 Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 16/168 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 K +++GD VGK+CLL+ + + + Y+ T+ ++ + T+ + G+ L ++DTAGQE Sbjct: 11 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 70 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT-PFLLVGTQIDLRD 121 + + Y +V + V S+ NVK+ W+ EI + + LLVG + DL Sbjct: 71 RFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYASENVNKLLVGNKSDL-- 127 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 T +K+ N TA++ A L + ++E SA ++ F Sbjct: 128 ---TTKKVVDNT-------TAKEFADSL-GIPFLETSAKNATNVEQAF 164 >5CLL-A nrPDB Length = 191 Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 2/135 (1%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 62 K V+VGDG GKT + + T +F +YV T+ + + + P ++DTAGQE Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 70 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDD 122 + LR Y Q ++ F V S +++NV W ++ C P +L G ++D++D Sbjct: 71 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPN-WHRDLVRVCENIPIVLCGNKVDIKDR 129 Query: 123 PSTIEKLAKNKQKPI 137 + + +++K + Sbjct: 130 KVKAKSIVFHRKKNL 144 >5UWI-A nrPDB Length = 237 Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 2/135 (1%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 62 K V+VGDG GKT + + T +F +YV T+ + + + P ++DTAGQE Sbjct: 32 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQE 91 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDD 122 + LR Y Q ++ F V S +++NV W ++ C P +L G ++D++D Sbjct: 92 KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVLCGNKVDIKDR 150 Query: 123 PSTIEKLAKNKQKPI 137 + + +++K + Sbjct: 151 KVKAKSIVFHRKKNL 165 >2GF9-A nrPDB Length = 189 Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 16/172 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 K +++G+ +VGKT L Y + F +V TV ++ V TV + L ++DTAGQE Sbjct: 23 FKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQE 82 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHCPKTPFLLVGTQIDLRD 121 Y + Y FL+ + + + SF V++ W +I T+ +LVG + DL D Sbjct: 83 RYRTITTAYYRGAMGFLLMYDIANQESFAAVQD-WATQIKTYSWDNAQVILVGNKCDLED 141 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173 ++ + E +LA DL ++ E SA +K VF+ + Sbjct: 142 ------------ERVVPAEDGRRLADDL-GFEFFEASAKENINVKQVFERLV 180 >2G6B-A nrPDB Length = 180 Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 17/162 (10%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKF-PSEYVPTVFDNYAVTVM-IGGEPYTLGLFDTAG 60 K ++VGD VGKTCLL+ + F ++ TV ++ V+ + G L ++DTAG Sbjct: 10 AFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAG 69 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPK-TPFLLVGTQIDL 119 QE + + Y L+ + V + +SF+N+ + W+ EI + +L+G ++D Sbjct: 70 QERFRSVTHAYYRDAHALLLLYDVTNKASFDNI-QAWLTEIHEYAQHDVALMLLGNKVD- 127 Query: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALT 161 S E++ K E EKLA++ + ++E SA T Sbjct: 128 ----SAHERVVKR-------EDGEKLAKEY-GLPFMETSAKT 157 >2EW1-A nrPDB Length = 201 Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 16/168 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 K V++G+ VGKTCL+ +T FP T+ ++ + TV I GE L ++DTAGQE Sbjct: 27 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 86 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-KTPFLLVGTQIDLRD 121 + + Y + ++ + + SF + E W+ EI + K +LVG +IDL + Sbjct: 87 RFRSITQSYYRSANALILTYDITCEESFRCLPE-WLREIEQYASNKVITVLVGNKIDLAE 145 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 ++ ++ + AE+ + + + + Y+E SA ++ +F Sbjct: 146 ------------RREVSQQRAEEFS-EAQDMYYLETSAKESDNVEKLF 180 >2F7S-A nrPDB Length = 217 Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 27/176 (15%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMI---------GGEPYT-- 52 IK + +GD VGKT L YT NKF +++ TV ++ ++ G+ + Sbjct: 26 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 85 Query: 53 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI--THHCPKTPF 110 L L+DTAGQE + L + FL+ F + S SF NV+ W+ ++ +C Sbjct: 86 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPDI 144 Query: 111 LLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLK 166 +L+G + DL D Q+ + A +LA D + Y E SA T + ++ Sbjct: 145 VLIGNKADLPD------------QREVNERQARELA-DKYGIPYFETSAATGQNVE 187 >4FMC-F nrPDB Length = 117 Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 3/115 (2%) Query: 7 VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQEDYD 65 +++GD VGK+CLL+ + + + Y+ T+ ++ + T+ + G+ L ++DTAGQE + Sbjct: 2 LLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFR 61 Query: 66 RLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT-PFLLVGTQIDL 119 + Y +V + V SF NVK+ W+ EI + + LLVG + DL Sbjct: 62 TITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGNKCDL 115 >4G01-B nrPDB Length = 181 Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 20/171 (11%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKF---PSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 K V++GD GK+ L++ + ++F + F ++ T+ + ++DTAGQ Sbjct: 14 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAF--FSQTLAVNDATVKFEIWDTAGQ 71 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHCPKTPFLLVGTQIDLR 120 E Y L P+ Y ++ F V + +SFE K KWV E+ P L G + DL Sbjct: 72 ERYHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNKSDLL 130 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDE 171 D + +T E A+ A++ + ++E SA T +K +F E Sbjct: 131 D------------ARKVTAEDAQTYAQE-NGLFFMETSAKTATNVKEIFYE 168 >5LDD-C nrPDB Length = 207 Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 18/187 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT-VMIGGEPYTLGLFDTAGQE 62 +K +++GD VGKT L+ Y KF + Y T+ ++ VM+ T+ L+DTAGQE Sbjct: 11 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTAGQE 70 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPE-ITHHCPKT----PFLLVGTQI 117 + L Y D ++ F V + SF+ + + W E + P+ PF+++G +I Sbjct: 71 RFQSLGVAFYRGADCCVLVFDVNNAKSFDAL-DSWRDEFLIQASPRDPENFPFVVLGIKI 129 Query: 118 DLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 D+ + ++ I+ + A+ + + Y E SA ++ F AL Sbjct: 130 DVEE-----------SKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNAL 178 Query: 178 EPPEPKK 184 E ++ Sbjct: 179 MQEESEE 185 >2GIL-A nrPDB Length = 162 Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 17/175 (9%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQED 63 K V +G+ +VGKT L+ + + F + Y T+ D + T+ + L L+DTAGQE Sbjct: 3 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 62 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHCPKTPFLLVGTQIDLRDD 122 + L P + V +V + + + +SF+ KW+ ++ T +LVG + DL D Sbjct: 63 FRSLIPSYIRDSTVAVVVYDITNVNSFQQTT-KWIDDVRTERGSDVIIMLVGNKTDLAD- 120 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 ++ ++ E E+ A++L V ++E SA +K +F + AAL Sbjct: 121 -----------KRQVSIEEGERKAKELN-VMFIETSAKAGYNVKQLF-RRVAAAL 162 >3CON-A nrPDB Length = 190 Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 17/156 (10%) Query: 16 KTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQT 75 K+ L I N F EY PT+ D+Y V+I GE L + DTAGQE+Y +R Sbjct: 34 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 93 Query: 76 DVFLVCFSVVSPSSFE--NVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNK 133 + FL F++ + SF N+ + + + P +LVG + DL P+ Sbjct: 94 EGFLCVFAINNSKSFADINLYREQIKRV-KDSDDVPMVLVGNKCDL---PT--------- 140 Query: 134 QKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 + + + A +LA+ + ++E SA T++G+++ F Sbjct: 141 -RTVDTKQAHELAKSY-GIPFIETSAKTRQGVEDAF 174 >5LEF-A nrPDB Length = 191 Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 17/188 (9%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTA 59 ++ K V +G+ +VGKT L+ + + F + Y T+ D + T+ + L L+DTA Sbjct: 7 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66 Query: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHCPKTPFLLVGTQID 118 G E + L P + V +V + + + +SF+ KW+ ++ T +LVG + D Sbjct: 67 GLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTT-KWIDDVRTERGSDVIIMLVGNKTD 125 Query: 119 LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 L D ++ ++ E E+ A++L V ++E SA +K +F + AAL Sbjct: 126 LAD------------KRQVSIEEGERKAKELN-VMFIETSAKAGYNVKQLF-RRVAAALP 171 Query: 179 PPEPKKSR 186 E + R Sbjct: 172 GMESTQDR 179 >5UHV-A nrPDB Length = 166 Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 17/156 (10%) Query: 16 KTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQT 75 K+ L I N F EY PT+ D+Y V+I GE L + DTAGQE+Y +R Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 75 Query: 76 DVFLVCFSVVSPSSFE--NVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNK 133 + FL F++ + SF N+ + + + P +LVG + DL P+ Sbjct: 76 EGFLCVFAINNSKSFADINLYREQIKRV-KDSDDVPMVLVGNKCDL---PT--------- 122 Query: 134 QKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 + + + A +LA+ + ++E SA T++G+++ F Sbjct: 123 -RTVDTKQAHELAKSY-GIPFIETSAKTRQGVEDAF 156 >5FBL-B nrPDB Length = 221 Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 3/118 (2%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63 K V++GD VGK+ LL +T N+F E T+ +A ++ + G+ ++DTAGQE Sbjct: 18 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQER 77 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT-PFLLVGTQIDLR 120 Y + Y L+ + + ++ENV E+W+ E+ H +LVG + DLR Sbjct: 78 YRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR 134 >3RAB-A nrPDB Length = 169 Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 16/172 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 K +++G+ +VGKT L Y + F +V TV ++ V T+ + L ++DTAGQE Sbjct: 6 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQE 65 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHCPKTPFLLVGTQIDLRD 121 Y + Y F++ + + + SF V++ W +I T+ LLVG + D+ D Sbjct: 66 RYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQVLLVGNKCDMED 124 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173 ++ ++ E +LA L ++ E SA +K F+ + Sbjct: 125 ------------ERVVSSERGRQLADHL-GFEFFEASAKDNINVKQTFERLV 163 >2ATV-A nrPDB Length = 196 Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 19/164 (11%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63 +K + G VGK+ L++ + T +F EY PT+ Y I E ++ + DTAGQED Sbjct: 29 VKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQED 88 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENV--KEKWVPEITHHCPKT-PFLLVGTQIDLR 120 + R + F++ + + SFE V + + EI PK +LVG + DL Sbjct: 89 TIQ-REGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKK--PKNVTLILVGNKADL- 144 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKG 164 + + ++ E EKLA +L A + ECSA T +G Sbjct: 145 -----------DHSRQVSTEEGEKLATEL-ACAFYECSACTGEG 176 >6HUF-A nrPDB Length = 182 Score = 66.2 bits (160), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 4/122 (3%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 62 IK + +GD VGKT +L YT KF S+++ TV D T+ + L L+DTAG E Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQLWDTAGLE 69 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHCPKTP-FLLVGTQIDLR 120 + L + FL+ F + + SF NV+ W+ ++ TH + P +L G + DL Sbjct: 70 RFRSLTTAFFRDAMGFLLLFDLTNEESFLNVR-NWISQLKTHAYSENPDIVLCGNKSDLE 128 Query: 121 DD 122 D+ Sbjct: 129 DE 130 >2IEY-A nrPDB Length = 195 Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 27/176 (15%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMI---------GGEPYT-- 52 IK + +GD VGKT L YT NKF +++ TV ++ ++ G+ + Sbjct: 12 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVH 71 Query: 53 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI--THHCPKTPF 110 L L+DTAG E + L + FL+ F + S SF NV+ W+ ++ +C Sbjct: 72 LQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPDI 130 Query: 111 LLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLK 166 +L+G + DL D E+ A+ E AEK + Y E SA T + ++ Sbjct: 131 VLIGNKADLPDQREVNERQAR--------ELAEKY-----GIPYFETSAATGQNVE 173 >2FG5-A nrPDB Length = 192 Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 3/150 (2%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTA 59 ++ +K ++GD VGK+ ++ + + F PT+ ++ TV G E + ++DTA Sbjct: 21 IRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTA 80 Query: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL-LVGTQID 118 GQE + L P+ Y + ++ + + SF +K KWV E+ H P+ + + G + D Sbjct: 81 GQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLK-KWVKELKEHGPENIVMAIAGNKCD 139 Query: 119 LRDDPSTIEKLAKNKQKPITPETAEKLARD 148 L D K AK + I E A++ Sbjct: 140 LSDIREVPLKDAKEYAESIGAIVVETSAKN 169 >3OES-A nrPDB Length = 201 Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 19/191 (9%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K V++G VGKT L + +F Y PTV + Y+ V +G + + L L DTAGQ++Y Sbjct: 26 KVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYSKIVTLGKDEFHLHLVDTAGQDEY 85 Query: 65 DRLRPLSY-PQTDVFLVCFSVVSPSSFENVKEKWVP-EITHHCPKTPFLLVGTQIDLRDD 122 L P S+ +++ +SV S SF+ ++ + H + P +LVG + DL Sbjct: 86 SIL-PYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVLVGNKADL--- 141 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI--LAALEPP 180 + ++ + +KLA A ++E SA + + +F + I +A +E Sbjct: 142 ---------SPEREVQAVEGKKLAESWGAT-FMESSARENQLTQGIFTKVIQEIARVENS 191 Query: 181 EPKKSRRCVLL 191 ++ RRC L+ Sbjct: 192 YGQE-RRCHLM 201 >2IEZ-A nrPDB Length = 220 Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 27/176 (15%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMI---------GGEPYT-- 52 IK + +GD VGKT L YT NKF +++ TV ++ ++ G+ + Sbjct: 12 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVH 71 Query: 53 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI--THHCPKTPF 110 L L+DTAG E + L + FL+ F + S SF NV+ W+ ++ +C Sbjct: 72 LQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPDI 130 Query: 111 LLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLK 166 +L+G + DL D E+ A+ E AEK + Y E SA T + ++ Sbjct: 131 VLIGNKADLPDQREVNERQAR--------ELAEKY-----GIPYFETSAATGQNVE 173 >3T5G-A nrPDB Length = 181 Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 20/176 (11%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K ++G +VGK+ L I + +F Y PT+ + + + + G+ Y L L DTAGQ++Y Sbjct: 8 KIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEY 67 Query: 65 DRLRPLSYP-QTDVFLVCFSVVSPSSFENVK---EKWVPEITHHCPKTPFLLVGTQIDLR 120 + P +Y + +++ +SV S SFE +K K + + + P +LVG + DL Sbjct: 68 S-IFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGK--VQIPIMLVGNKKDL- 123 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 + ++ I+ E + LA A ++E SA + +VF IL A Sbjct: 124 -----------HMERVISYEEGKALAESWNAA-FLESSAKENQTAVDVFRRIILEA 167 >4UJ4-A nrPDB Length = 185 Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 3/118 (2%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63 K V++GD VGK+ LL +T N+F E T+ +A ++ + G+ ++DTAG E Sbjct: 12 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLER 71 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT-PFLLVGTQIDLR 120 Y + Y L+ + + ++ENV E+W+ E+ H +LVG + DLR Sbjct: 72 YRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR 128 >3BC1-A nrPDB Length = 195 Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 27/169 (15%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMI-----------GGEPYT 52 IK + +GD VGKT +L YT KF S+++ TV ++ ++ G+ Sbjct: 12 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIH 71 Query: 53 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTP-F 110 L L+DTAG E + L + FL+ F + + SF NV+ W+ ++ H + P Sbjct: 72 LQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVR-NWISQLQMHAYSENPDI 130 Query: 111 LLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSA 159 +L G + DL D Q+ + E A +LA + Y E SA Sbjct: 131 VLCGNKSDLED------------QRAVKEEEARELAEKY-GIPYFETSA 166 >1Z0F-A nrPDB Length = 179 Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 43/171 (25%), Positives = 85/171 (49%), Gaps = 16/171 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM-IGGEPYTLGLFDTAGQE 62 K +++GD VGK+CLL +T KF ++ T+ + ++ + G+ L ++DTAGQE Sbjct: 16 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 75 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 + + Y L+ + + S++ ++ W+ + + P T +L+G + DL Sbjct: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKADLE- 133 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEA 172 Q+ +T E A++ A + + ++E SA T + +++ F EA Sbjct: 134 -----------AQRDVTYEEAKQFAEE-NGLLFLEASAKTGENVEDAFLEA 172 >2IL1-A nrPDB Length = 192 Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 15/168 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 ++ +++G VGKT L+ +T + F TV ++ + TV + G+ L ++DTAGQE Sbjct: 27 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 86 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPK-TPFLLVGTQIDLRD 121 ++ + Y ++ + + +F+++ KW+ I + + LLVG ++D Sbjct: 87 RFNSITSAYYRSAKGIILVYDITKKETFDDL-PKWMKMIDKYASEDAELLLVGNKLDCET 145 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 D + IT + EK A+ + +++ E SA + +F Sbjct: 146 D------------REITRQQGEKFAQQITGMRFCEASAKDNFNVDEIF 181 >5UB8-A nrPDB Length = 222 Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 24/191 (12%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63 K V++GD VGK+ LL +T ++F E T+ +A T+ I G+ ++DTAGQE Sbjct: 17 KIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQER 76 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL-LVGTQIDLRDD 122 Y + Y L+ + + S+E+V +W+ E+ H + LVG + DL Sbjct: 77 YRAITSAYYRGAVGALIVYDIAKTESYESVS-RWLKELKEHADANIIIELVGNKSDL--- 132 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKG--------LKNVFDEAIL 174 + + + E A+ A + + + E SAL+ LKN+++ Sbjct: 133 ---------DHLRAVPTEEAKNFAME-NNLLFTEASALSSDNVDLSFHQLLKNIYEMISK 182 Query: 175 AALEPPEPKKS 185 LE + K++ Sbjct: 183 HQLENNDSKQT 193 >1D5C-A nrPDB Length = 162 Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 6/153 (3%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQED 63 K V +G+ AVGKT ++ + + F + Y T+ D + T+ + P L L+DTAGQE Sbjct: 3 KLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQER 62 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL-LVGTQIDLRD- 121 + L P + +V + + + SFEN KW+ +I + K + LVG + DL D Sbjct: 63 FRSLIPSYIRDSAAAIVVYDITNRQSFENT-TKWIQDILNERGKDVIIALVGNKTDLGDL 121 Query: 122 DPSTIEKLAKNKQKPIT--PETAEKLARDLKAV 152 T E+ + Q+ T ET+ K ++K + Sbjct: 122 RKVTYEEGMQKAQEYNTMFHETSAKAGHNIKVL 154 >1YVD-A nrPDB Length = 169 Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 7/163 (4%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTA 59 ++ +K ++GD VGK+ ++ + + F PT+ ++ TV E + ++DTA Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62 Query: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL-LVGTQID 118 GQE + L P+ Y + ++ + + +F +K WV E+ H P + + + G + D Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLK-NWVRELRQHGPPSIVVAIAGNKCD 121 Query: 119 LRDDPSTIEKLAKNKQKPITP---ETAEKLARDLKAVKYVECS 158 L D +E+ AK+ I ET+ K A ++ + ++E S Sbjct: 122 LTDVREVMERDAKDYADSIHAIFVETSAKNAININEL-FIEIS 163 >5YOZ-A nrPDB Length = 177 Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 15/169 (8%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQ 61 + K V++G+ GK+ + + +T N+F + T+ + + TVMI G ++DTAG Sbjct: 15 SAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTAGL 74 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLR 120 E + L P+ Y LV + + + S + + W+ E+ + P +LVG + DL Sbjct: 75 ERFRSLAPIYYRGASGALVVYDITNSESLKKA-QTWIKELRANADPSLIIVLVGNKKDL- 132 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 + ++ E ++LA + + + E SA ++ VF Sbjct: 133 -----------GSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVF 170 >1ZBD-A nrPDB Length = 203 Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 16/172 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 K +++G+ +VGKT L Y + F +V TV ++ V T+ + L ++DTAG E Sbjct: 9 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGLE 68 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHCPKTPFLLVGTQIDLRD 121 Y + Y F++ + + + SF V++ W +I T+ LLVG + D+ D Sbjct: 69 RYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQVLLVGNKCDMED 127 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173 ++ ++ E +LA L ++ E SA +K F+ + Sbjct: 128 ------------ERVVSSERGRQLADHL-GFEFFEASAKDNINVKQTFERLV 166 >6IYB-A nrPDB Length = 199 Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 8/124 (6%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT-VMIGGEPYTLGLFDTAGQE 62 +K +++GD VGKT L+ Y KF ++Y T+ ++ VM+ T+ ++DTAG E Sbjct: 14 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGLE 73 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPE-ITHHCPKT----PFLLVGTQI 117 + Y D ++ F V +P++F+ + + W E + P+ PF+++G +I Sbjct: 74 RFQSGVAF-YRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKI 131 Query: 118 DLRD 121 DL + Sbjct: 132 DLEN 135 >5XOJ-A nrPDB Length = 182 Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 2/136 (1%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQ 61 T K V+VGDG GKT + + T +F +Y+ T+ + + ++ ++DTAG Sbjct: 12 TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGL 71 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 E + LR Y ++ F V S +++NV W ++ C P +L G ++D+++ Sbjct: 72 EKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPN-WHRDLVRVCENIPIVLCGNKVDVKE 130 Query: 122 DPSTIEKLAKNKQKPI 137 + + +++K + Sbjct: 131 RKVKAKTITFHRKKNL 146 >1Z0A-A nrPDB Length = 174 Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 16/168 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQE 62 K +++GD VGK+CLL+ +T +F + T+ + A + I G+ L ++DTAGQE Sbjct: 11 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 70 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 + + Y L+ + + +F ++ W+ + H +L+G + DL Sbjct: 71 SFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHSNSNMVIMLIGNKSDL-- 127 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 ++ + E E AR+ + ++E SA T ++ F Sbjct: 128 ----------ESRREVKKEEGEAFARE-HGLIFMETSAKTASNVEEAF 164 >3BFK-A nrPDB Length = 181 Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 37/119 (31%), Positives = 60/119 (50%), Gaps = 4/119 (3%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTV--MIGGEPYTLGLFDTAGQE 62 K V++GD VGK+ LL +T ++F E T+ +A + + ++DTAGQE Sbjct: 9 KIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQE 68 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLR 120 Y + Y L+ + + +SFEN+ EKW+ E+ + LLVG + DL+ Sbjct: 69 RYRAITSAYYRGAVGALLVYDITKKNSFENI-EKWLKELRDNADSNIVILLVGNKSDLK 126 >1Z06-A nrPDB Length = 189 Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 5/123 (4%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAG 60 + K +V+GD VGKTCL + +FP T+ D V I GE + L+DTAG Sbjct: 19 RIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAG 78 Query: 61 QEDYDR-LRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH--CPKTPFLLVGTQI 117 QE + + + Y + + + + +SF ++ W+ E H P +LVG + Sbjct: 79 QERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSL-PAWIEECKQHLLANDIPRILVGNKC 137 Query: 118 DLR 120 DLR Sbjct: 138 DLR 140 >2G77-B nrPDB Length = 198 Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 5/123 (4%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAG 60 + K +V+GD VGKTCL + +FP T+ D V I GE + L+DTAG Sbjct: 28 RIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAG 87 Query: 61 QEDYDR-LRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH--CPKTPFLLVGTQI 117 QE + + + Y + + + + +SF ++ W+ E H P +LVG + Sbjct: 88 QERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSL-PAWIEECKQHLLANDIPRILVGNKC 146 Query: 118 DLR 120 DLR Sbjct: 147 DLR 149 >3CPJ-B nrPDB Length = 223 Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 16/172 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 K V++GD VGK+ LL +T N+F + T+ +A T+ I G+ ++DTAGQE Sbjct: 14 FKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTAGQE 73 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL-LVGTQIDLRD 121 Y + Y L+ + + SS+EN W+ E+ + + L+G + DL Sbjct: 74 RYRAITSAYYRGAVGALIVYDISKSSSYENCNH-WLSELRENADDNVAVGLIGNKSDLA- 131 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173 + + E ++ A++ + + + E SAL + + F+E I Sbjct: 132 -----------HLRAVPTEESKTFAQENQLL-FTETSALNSENVDKAFEELI 171 >3WYF-A nrPDB Length = 219 Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 2/136 (1%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQ 61 T K V+VGDG GKT + + T +F +Y+ T+ + + ++ ++DTAG Sbjct: 12 TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGL 71 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 E + LR Y ++ F V S +++NV W ++ C P +L G ++D+++ Sbjct: 72 EKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPN-WHRDLVRVCENIPIVLCGNKVDVKE 130 Query: 122 DPSTIEKLAKNKQKPI 137 + + +++K + Sbjct: 131 RKVKAKTITFHRKKNL 146 >3TSO-A nrPDB Length = 178 Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 16/169 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 K V++G+ VGKT LL +T N+F + T+ ++ TVM+G ++DTAG E Sbjct: 11 FKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLE 70 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT-PFLLVGTQIDLRD 121 Y + Y L+ F + ++ V E+W+ E+ H T +LVG + DL Sbjct: 71 RYRAITSAYYRGAVGALLVFDLTKHQTYA-VVERWLKELYDHAEATIVVMLVGNKSDL-- 127 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFD 170 ++ + + E A A + + ++E SAL ++ F+ Sbjct: 128 ----------SQAREVPTEEARMFAEN-NGLLFLETSALDSTNVELAFE 165 >3DZ8-A nrPDB Length = 191 Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 16/174 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 K +++G+ +VGKT L Y + F +V TV ++ V TV + L ++DTAGQE Sbjct: 24 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQE 83 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHCPKTPFLLVGTQIDLRD 121 Y + Y F++ + + + SF V++ W +I T+ +LVG + D+ + Sbjct: 84 RYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WATQIKTYSWDNAQVILVGNKCDMEE 142 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 ++ + E + LA L + E SA ++ F+ + A Sbjct: 143 ------------ERVVPTEKGQLLAEQL-GFDFFEASAKENISVRQAFERLVDA 183 >5XC3-A nrPDB Length = 176 Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 16/172 (9%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIG--GEPYTLGLFDTAGQE 62 K +++G VGK+ ++ + N+ S PT+ +A +I G+ L ++DTAGQE Sbjct: 7 KIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQE 66 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLL-VGTQIDLRD 121 + + + Y + LV F V SF++V W+ ++ +C T ++L V +ID Sbjct: 67 RFRSITKMYYTNSLGCLVVFDVTDRESFDDV-YYWINDLRINCHTTYYILVVANKID--- 122 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173 + KN + ++ +K RD YV S+ + N+F + I Sbjct: 123 -------IDKNNWR-VSENEIKKFCRD-NDCDYVFASSFESDTVNNLFGKMI 165 >2A5J-A nrPDB Length = 191 Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 16/168 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQE 62 K +++GD VGK+CLL+ +T +F + T+ + A V I G+ L ++DTAGQE Sbjct: 22 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQE 81 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTP-FLLVGTQIDLRD 121 + + Y L+ + + +F ++ W+ + H +L+G + DL Sbjct: 82 SFRSITRSYYRGAAGALLVYDITRRETFNHLT-SWLEDARQHSSSNMVIMLIGNKSDL-- 138 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 ++ + E E AR+ + ++E SA T ++ F Sbjct: 139 ----------ESRRDVKREEGEAFARE-HGLIFMETSAKTACNVEEAF 175 >3RAP-R nrPDB Length = 167 Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 3/106 (2%) Query: 16 KTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQT 75 K+ L + + T F +Y PT+ D Y + + P L + DTAG E + +R L Sbjct: 16 KSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNG 75 Query: 76 DVFLVCFSVVSPSSFENVK--EKWVPEITHHCPKTPFLLVGTQIDL 119 F++ +S+V+ SF+++K + + + K P +LVG ++DL Sbjct: 76 QGFILVYSLVNQQSFQDIKPMRDQIIRVKRY-EKVPVILVGNKVDL 120 >1TU4-A nrPDB Length = 171 Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 16/168 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 K V++G+ AVGK+ L++ + +F T+ + TV + ++DTAGQE Sbjct: 8 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 67 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 Y L P+ Y +V + + + SF K WV E+ P L G + DL + Sbjct: 68 RYHSLAPMYYRGAQAAIVVYDITNEESFARAK-NWVKELQRQASPNIVIALSGNKADLAN 126 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 ++ + + A+ A D ++ ++E SA T + +F Sbjct: 127 ------------KRAVDFQEAQSYADD-NSLLFMETSAKTSMNVNEIF 161 >2O52-A nrPDB Length = 200 Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 14/167 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM-IGGEPYTLGLFDTAGQE 62 K +V+G GK+CLL + NKF + T+ + V+ +GG+ L ++DTAGQE Sbjct: 26 FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQE 85 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDD 122 + + Y L+ + + S ++ ++ T P +L G + DL D Sbjct: 86 RFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDL--D 143 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 P ++ +T A + A++ + ++E SALT + ++ F Sbjct: 144 P----------EREVTFLEASRFAQE-NELMFLETSALTGENVEEAF 179 >4RKE-A nrPDB Length = 176 Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 16/167 (9%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQED 63 K +++GD VGK+CLL+ +T +F + T+ + A + I G+ L ++DTAG E Sbjct: 12 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGLEA 71 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRDD 122 + + Y L+ + + +F ++ W+ + H +L+G + DL Sbjct: 72 FRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHSNSNMVIMLIGNKSDL--- 127 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 + ++ + E E AR+ V ++E SA T ++ F Sbjct: 128 ---------DSRREVKKEEGEAFAREHGLV-FMETSARTAANVEEAF 164 >2HEI-A nrPDB Length = 179 Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 17/182 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 K V++G+ AVGK+ L++ + +F T+ + +V + ++DTAGQE Sbjct: 9 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQE 68 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 Y L P+ Y +V + + + +F K WV E+ P L G + DL + Sbjct: 69 RYHSLAPMYYRGAQAAIVVYDITNQETFARAK-TWVKELQRQASPSIVIALAGNKADLAN 127 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 ++ + E A+ A D ++ ++E SA T + ++F AI L E Sbjct: 128 ------------KRMVEYEEAQAYADD-NSLLFMETSAKTAMNVNDLF-LAIAKKLPKSE 173 Query: 182 PK 183 P+ Sbjct: 174 PQ 175 >5WDR-A nrPDB Length = 171 Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 16/156 (10%) Query: 16 KTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQT 75 K+ L I F +EY PT+ D+Y V I E L + DTAGQEDY +R Sbjct: 20 KSALTIQLIQQHFVTEYDPTIEDSYRKHVSIDDEACLLDILDTAGQEDYSAMRDQYMRTG 79 Query: 76 DVFLVCFSVVSPSSFENVK--EKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNK 133 + FL +S+ S S + + + + + + P +LVG + DL + Sbjct: 80 EGFLCVYSIDSQQSLDEIHSFREQILRVKDQ-DEVPMILVGNKCDL------------EE 126 Query: 134 QKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 + ++ E + +A+ ++ ++E SA + ++ F Sbjct: 127 HREVSTEAGQAVAKSY-SIPFMETSAKKRINVEEAF 161 >2HUP-A nrPDB Length = 201 Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 15/168 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 62 K V+VGD +VGKTC++ + T F T+ ++ + T+ I G+ L ++DTAGQE Sbjct: 30 FKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQE 89 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPF-LLVGTQIDLRD 121 + + Y + ++ + + SSF +V W+ ++ + LL+G + DL Sbjct: 90 RFRTITQSYYRSANGAILAYDITKRSSFLSVPH-WIEDVRKYAGSNIVQLLIGNKSDL-- 146 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 ++ + ++ A+ LA + +E SA ++ F Sbjct: 147 ----------SELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAF 184 >3RWM-B nrPDB Length = 185 Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 16/176 (9%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 63 K V++GD VGK+ LL +TT++F E T+ +A T+ + + ++DTAG E Sbjct: 12 KIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGLER 71 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL-LVGTQIDLRDD 122 Y + Y L+ + + SS+EN W+ E+ + + L+G + DL Sbjct: 72 YRAITSAYYRGAVGALIVYDISKSSSYENCNH-WLTELRENADDNVAVGLIGNKSDLA-- 128 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 + + + A+ A + + + + E SAL + F E I+A + Sbjct: 129 ----------HLRAVPTDEAKNFAMENQML-FTETSALNSDNVDKAFRELIVAIFQ 173 >2GF0-A nrPDB Length = 199 Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 16/160 (10%) Query: 16 KTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQT 75 K+ L++ + F Y+PT+ D Y + TL + DT G + ++ LS + Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKG 80 Query: 76 DVFLVCFSVVSPSSFENVK--EKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNK 133 F++ FSV S S E + K + +I P +LVG + D Sbjct: 81 HAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCD-------------ET 127 Query: 134 QKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173 Q+ + A+ +A++ K ++E SA +K +F E + Sbjct: 128 QREVDTREAQAVAQEWKCA-FMETSAKMNYNVKELFQELL 166 >2FN4-A nrPDB Length = 181 Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 16/162 (9%) Query: 16 KTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQT 75 K+ L I + + F S+Y PT+ D+Y + G P L + DTAGQE++ +R Sbjct: 22 KSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAG 81 Query: 76 DVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT--PFLLVGTQIDLRDDPSTIEKLAKNK 133 FL+ F++ SF V K +I + P +LVG + DL + Sbjct: 82 HGFLLVFAINDRQSFNEVG-KLFTQILRVKDRDDFPVVLVGNKADLE----------SQR 130 Query: 134 QKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 Q P + +A + V Y E SA + + F++ + A Sbjct: 131 QVPRSEASAFGASHH---VAYFEASAKLRLNVDEAFEQLVRA 169 >3PIR-A nrPDB Length = 183 Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 16/146 (10%) Query: 16 KTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQT 75 K+ L I + F EY PT+ D+Y I + L + DTAGQE++ +R Sbjct: 31 KSALTIQFFQKIFVPEYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTG 90 Query: 76 DVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT--PFLLVGTQIDLRDDPSTIEKLAKNK 133 D FL+ +SV +SFE+V +++ I + P +LV ++DL + K+ +++ Sbjct: 91 DGFLIVYSVTDKASFEHV-DRFHQLILRVKDRESFPMILVANKVDLMH----LRKVTRDQ 145 Query: 134 QKPITPETAEKLARDLKAVKYVECSA 159 K E A K + Y+E SA Sbjct: 146 GK----EMATKY-----NIPYIETSA 162 >2BMD-A nrPDB Length = 186 Score = 52.8 bits (125), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 19/183 (10%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM-IGGEPYTLGLFDTAGQE 62 K +V+G+ GK+CLL + KF + T+ + ++ +GG+ L ++DTAGQE Sbjct: 11 FKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQE 70 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT-PFLLVGTQIDLRD 121 + + Y L+ + + S ++ N W+ + + +L G + DL Sbjct: 71 RFRSVTRSYYRGAAGALLVYDITSRETY-NALTNWLTDARMLASQNIVIILCGNKKDLDA 129 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDE---AILAALE 178 D + +T A + A++ + ++E SALT + ++ F + IL +E Sbjct: 130 D------------REVTFLEASRFAQE-NELMFLETSALTGENVEEAFVQCARKILNKIE 176 Query: 179 PPE 181 E Sbjct: 177 SGE 179 >3CBQ-A nrPDB Length = 195 Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 20/175 (11%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 62 K ++VG+ VGK+ L ++ + S + P D Y +M+ E TL ++D Q Sbjct: 24 FKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVVYDIWEQG 83 Query: 63 DYDR-LRPLSYPQTDVFLVCFSVVSPSSFENVKE---KWVPEITHHCPKTPFLLVGTQID 118 D LR D FL+ FSV SF V E + HH P +LVG + D Sbjct: 84 DAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHH--DLPVILVGNKSD 141 Query: 119 LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173 L + + ++ E LA L + K++E SA + +F+ A+ Sbjct: 142 L------------ARSREVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAV 183 >3E5H-A nrPDB Length = 178 Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 9/126 (7%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMI-GGEPYTLGLFDT 58 M+ +K VV+GDGA GKT L + F +Y T+ D + + + G TL ++D Sbjct: 4 MRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDI 63 Query: 59 AGQEDYDR-LRPLSYPQTDVFLVCFSVVSPSSFENVKEKW---VPEITHHCPKTPFL-LV 113 GQ + L Y V LV + + + SFEN+ E W V +++ P + LV Sbjct: 64 GGQTIGGKMLDKYIYGAQGVLLV-YDITNYQSFENL-EDWYTVVKKVSEESETQPLVALV 121 Query: 114 GTQIDL 119 G +IDL Sbjct: 122 GNKIDL 127 >4CZ2-A nrPDB Length = 230 Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 20/163 (12%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEP--YTLGLFDTAGQ 61 K +V+G+ VGKT ++ Y F Y T+ ++A+ V+ L L+D AG Sbjct: 31 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGL 90 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH--HCPK---TPFLLVGTQ 116 E + + + Y + V F + S+FE V KW ++ H P P +L+ + Sbjct: 91 ERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 149 Query: 117 IDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSA 159 D +NK ++P ++ ++ + E SA Sbjct: 150 CD------------QNKDSSMSPSQMDQFCKEHGFAGWFETSA 180 >4DJT-A nrPDB Length = 218 Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 4/130 (3%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFD-NYAVTVMIG-GEPYTLGLFDTAG 60 T K ++GDG VGKT + +F Y TV N+ VT + G ++DTAG Sbjct: 11 TYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAG 70 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-KTPFLLVGTQIDL 119 QE L+ + Y ++ F V S + +N+ +WV E + P ++ +ID+ Sbjct: 71 QEKKAVLKDVYYIGASGAILFFDVTSRITCQNLA-RWVKEFQAVVGNEAPIVVCANKIDI 129 Query: 120 RDDPSTIEKL 129 ++ +KL Sbjct: 130 KNRQKISKKL 139 >2NZJ-A nrPDB Length = 175 Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 24/177 (13%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 M + V++GD VGKT L + + + D Y T+ + GE TL + DT Sbjct: 2 MALYRVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERTLTVDGEDTTLVVVDTWE 61 Query: 61 QEDYDRLRPLSYPQTD------VFLVCFSVVSPSSFENVKEKWVP-EITHHCPKTPFLLV 113 E D+ S+ Q +++ +S+ SFE+ E + TH P +LV Sbjct: 62 AEKLDK----SWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILV 117 Query: 114 GTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFD 170 G + D LA+ ++ + A + D K++E SA Q + +F+ Sbjct: 118 GNKAD----------LARCREVSVEEGRACAVVFD---CKFIETSATLQHNVAELFE 161 >6FF8-A nrPDB Length = 181 Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 12/152 (7%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEP--YTLGLFDTAGQ 61 K +V+G+ VGKT ++ Y F Y T+ ++A+ V+ L L+D AG Sbjct: 9 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGL 68 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH--HCPK---TPFLLVGTQ 116 E + + + Y + V F + S+FE V KW ++ H P P +L+ + Sbjct: 69 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 127 Query: 117 IDLRDD----PSTIEKLAKNKQKPITPETAEK 144 D D PS +++ K ET+ K Sbjct: 128 CDQNKDSSQSPSQVDQFCKEHGFAGWFETSAK 159 >3Q85-A nrPDB Length = 169 Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 20/175 (11%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEY-VPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62 K ++VG+ VGK+ L ++ + + + D Y +M+ E TL ++D Q Sbjct: 3 FKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQG 62 Query: 63 DYDRLRPLSYPQT-DVFLVCFSVVSPSSFENVKE---KWVPEITHHCPKTPFLLVGTQID 118 D QT D FL+ FSV SF V E + HH P +LVG + D Sbjct: 63 DAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHH--DLPVILVGNKSD 120 Query: 119 LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173 L + + ++ E LA L + K++E SA + +F+ A+ Sbjct: 121 L------------ARSREVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAV 162 >2CJW-A nrPDB Length = 192 Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 40/176 (22%), Positives = 76/176 (43%), Gaps = 21/176 (11%) Query: 1 MQTIKCVVVGDGAVGKTCL--LISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYT---LGL 55 M + V++G+ VGK+ L + + + S+ D Y T+M+ GE T L + Sbjct: 4 MTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDM 63 Query: 56 FDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVP-EITHHCPKTPFLLVG 114 ++ G+ ++ L D +L+ +S+ +SFE E + P +LVG Sbjct: 64 WENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVG 121 Query: 115 TQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFD 170 + D L + ++ ++ A + D K++E SA Q +K +F+ Sbjct: 122 NKSD----------LVRCREVSVSEGRACAVVFD---CKFIETSAAVQHNVKELFE 164 >2G3Y-A nrPDB Length = 211 Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 21/172 (12%) Query: 5 KCVVVGDGAVGKTCL--LISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYT---LGLFDTA 59 + V++G+ VGK+ L + + + S+ D Y T+M+ GE T L +++ Sbjct: 39 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENK 98 Query: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVP-EITHHCPKTPFLLVGTQID 118 G+ ++ L D +L+ +S+ +SFE E + P +LVG + D Sbjct: 99 GENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSD 156 Query: 119 LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFD 170 L + ++ ++ A + D K++E SA Q +K +F+ Sbjct: 157 ----------LVRCREVSVSEGRACAVVFD---CKFIETSAAVQHNVKELFE 195 >5C1S-A nrPDB Length = 391 Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 27/150 (18%) Query: 4 IKCVVVGDGAVGKT----CLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 I+ +VVG VGKT C S+ + + DN + + I D A Sbjct: 63 IRLLVVGSSGVGKTTLCDCFFESHQSQGEETREKHVQIDNDFIRISIS---------DIA 113 Query: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-KTPFLLVGTQID 118 GQ+ + Y D LV + + SF ++K W+P+I +C T +++G + D Sbjct: 114 GQQSFYACDN-PYDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIGNKKD 172 Query: 119 LRDDPSTIEKLAKNKQKPITPETAEKLARD 148 D + IT + AE+ A+D Sbjct: 173 QEID------------RIITRKEAEQFAQD 190 Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 22/159 (13%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEP--YTLGLFDTAG 60 I+ ++VGD VGKT + + PT D A+T E Y + + D Sbjct: 223 IRMLMVGDQNVGKTTFIRKFALQD------PTGHDFMNAITTRFEMEKIKYEIIMIDWGF 276 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR 120 + P + L+ + + + SF+N+ K+ P I + ++VG + DL Sbjct: 277 YNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAGVIVGYKTDL- 335 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSA 159 Q+ IT A LA D KYVE S+ Sbjct: 336 -----------EAQRKITMGDALTLA-DWLGYKYVEMSS 362 >3C5C-A nrPDB Length = 187 Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 26/181 (14%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63 + ++G GK+ L + + T +F SEY P + D Y+ + +P L + DTA D Sbjct: 22 VNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQPVHLRVMDTA---D 78 Query: 64 YDR----LRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT----PFLLVGT 115 D R L++ FLV +S V + ++ + H +T P LL+G Sbjct: 79 LDTPRNCERYLNWAHA--FLVVYS-VDSRQSFDSSSSYLELLALHAKETQRSIPALLLGN 135 Query: 116 QIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 ++D +A+ +Q +T LA + + + L + +++VF EA+ Sbjct: 136 KLD----------MAQYRQ--VTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVRE 183 Query: 176 A 176 A Sbjct: 184 A 184 >3D6T-B nrPDB Length = 171 Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/125 (22%), Positives = 55/125 (44%), Gaps = 6/125 (4%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNK-----FPSEYVPTVFDNYAVTVMIGGE-PYTLGLFD 57 +K ++VG+ GKT LL K S V ++ + + + L ++D Sbjct: 1 MKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWD 60 Query: 58 TAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQI 117 AG+E++ P Q ++L + + + + + W+ I +P +LVGT + Sbjct: 61 FAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSSPVILVGTHL 120 Query: 118 DLRDD 122 D+ D+ Sbjct: 121 DVSDE 125 >3IHW-A nrPDB Length = 184 Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 17/169 (10%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63 +K +VG+ + GK+ L+ Y T + E P + +++ G+ Y L + D G + Sbjct: 21 LKVGIVGNLSSGKSALVHRYLTGTYVQEESPEG-GRFKKEIVVDGQSYLLLIRDEGGPPE 79 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT-HHCPKTPFLLVGTQIDLRDD 122 L+ ++ VF+ FS+ SF+ V ++ + + + P +LVGTQ Sbjct: 80 ---LQFAAWVDAVVFV--FSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQ------ 128 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDE 171 + ++ + I A KL+ DLK Y E A ++ VF + Sbjct: 129 ----DAISAANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQD 173 >3DPU-A nrPDB Length = 535 Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 37/150 (24%), Positives = 62/150 (41%), Gaps = 24/150 (16%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGL----- 55 +Q IK ++GDG GKT LL F P + + V+ P GL Sbjct: 39 LQEIKVHLIGDGMAGKTSLLKQLIGETFD----PKESQTHGLNVVTKQAPNIKGLENDDE 94 Query: 56 --------FDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPK 107 +D GQE ++ V+++ + S+ K W+ I + K Sbjct: 95 LKECLFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDSN----KHYWLRHIEKYGGK 150 Query: 108 TPFLLVGTQIDLRDDPS-TIEKLAKNKQKP 136 +P ++V +ID ++PS IE+ N++ P Sbjct: 151 SPVIVVMNKID--ENPSYNIEQKKINERFP 178 >3CLV-A nrPDB Length = 208 Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 16/115 (13%) Query: 55 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVG 114 ++DTAGQE Y + PL Y +V F + + ++ + K WV ++ +LV Sbjct: 97 IWDTAGQERYASIVPLYYRGATCAIVVFDISNSNTLDRAKT-WVNQL-KISSNYIIILVA 154 Query: 115 TQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 +ID KNK + E +K A+D + +++ SA T +KN+F Sbjct: 155 NKID------------KNKFQVDILE-VQKYAQD-NNLLFIQTSAKTGTNIKNIF 195 >6HLU-A nrPDB Length = 974 Score = 35.0 bits (79), Expect = 0.019, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 62/150 (41%), Gaps = 24/150 (16%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGL----- 55 +Q IK ++GDG GKT LL F P + + V+ P GL Sbjct: 478 LQEIKVHLIGDGMAGKTSLLKQLIGETFD----PKESQTHGLNVVTKQAPNIKGLENDDE 533 Query: 56 --------FDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPK 107 +D GQE ++ V+++ + S+ K W+ I + K Sbjct: 534 LKECLFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDSN----KHYWLRHIEKYGGK 589 Query: 108 TPFLLVGTQIDLRDDPS-TIEKLAKNKQKP 136 +P ++V +ID ++PS IE+ N++ P Sbjct: 590 SPVIVVMNKID--ENPSYNIEQKKINERFP 617 >3Q72-A nrPDB Length = 166 Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust. Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 6/118 (5%) Query: 5 KCVVVGDGAVGKTCL--LISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62 K +++G VGK+ L + + +E +D ++++ GE +L ++D Q+ Sbjct: 4 KVLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDR---SIVVDGEEASLMVYDIWEQD 60 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVP-EITHHCPKTPFLLVGTQIDL 119 L D +++ +SV SFE E V P +LVG + DL Sbjct: 61 GGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDL 118 >2YC4-C nrPDB Length = 208 Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 7/99 (7%) Query: 3 TIKC--VVVGDGAVGKTCLLISYTT--NKFPSEYVPTVFDNYAVT-VMIGGEPYTLGLF- 56 T++C VVG+ VGK+ L+ +T+ +KF +Y T V V I ++ LF Sbjct: 18 TLRCKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFL 77 Query: 57 -DTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVK 94 DTAG + Y + ++ F V S SFE+ K Sbjct: 78 LDTAGSDLYKEQISQYWNGVYYAILVFDVSSMESFESCK 116 >4NK4-A nrPDB Length = 301 Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Query: 56 FDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSS----FENVKEKW 97 F G+ RL+PL+ F++ +V PSS FE +KE+W Sbjct: 72 FSYQGESIGKRLKPLALTVDSDFMIPCNVEDPSSMDLLFERIKERW 117 >4B6L-A nrPDB Length = 281 Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust. Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 15/110 (13%) Query: 91 ENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLK 150 +++ + + +HH + + ++ R ++ + K + + PE L + L Sbjct: 64 RDLQHRHIVRFSHHFEDADNIYIFLELCSR---KSLAHIWKARHTLLEPEVRYYLRQILS 120 Query: 151 AVKYVECSALTQKGLK--NVF----------DEAILAALEPPEPKKSRRC 188 +KY+ + + LK N F D + A LEPPE +K C Sbjct: 121 GLKYLHQRGILHRDLKLGNFFITENMELKVGDFGLAARLEPPEQRKKTIC 170 >5IRR-A nrPDB Length = 308 Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLG 54 IK +VVGD +GKT L+ S + P E + +Y T +P +L Sbjct: 27 IKLIVVGDSGLGKTTLIKSLIS--IPGERLQVHDGSYTPTEQFRRDPESLS 75 >3ZH9-B nrPDB Length = 347 Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust. Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 4/75 (5%) Query: 71 SYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLA 130 SY Q+ F +++P +E + E+ ++T K F++ +++ ++ LA Sbjct: 104 SYIQSPAPYTVFVLLAP--YEKLDER--KKLTKALKKHAFMMEAKELNAKETTDFTVNLA 159 Query: 131 KNKQKPITPETAEKL 145 K +QK I E AE L Sbjct: 160 KTEQKTIGTEAAEHL 174 >2IWR-A nrPDB Length = 178 Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust. Identities = 34/171 (19%), Positives = 64/171 (37%), Gaps = 19/171 (11%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63 ++ V+GD GK+ L+ + T + T + Y +++ G+ + + + + AG D Sbjct: 8 LRLGVLGDARSGKSSLIHRFLTGSYQV-LEKTESEQYKKEMLVDGQTHLVLIREEAGAPD 66 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKE---KWVPEITHHCPKTPFLLVGTQIDLR 120 D + FS+ +SF+ V + LVGTQ Sbjct: 67 -----AKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQ---- 117 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDE 171 ++++ + + + A L D+K Y E A + VF E Sbjct: 118 ------DRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQE 162 >4PQG-A nrPDB Length = 511 Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 13/108 (12%) Query: 42 VTVMIGGEPYTLGLFDTAGQEDYDRLRPL-SYPQTDVFLVCFSVVSPSSFENVKEKWVPE 100 + V++ E Y+ + A EDY Y T+ V F +VS V ++ + Sbjct: 245 LAVVVHAEHYS----ENATNEDYILWNNYYDYQFTNADKVDFFIVSTDRQNEVLQEQFAK 300 Query: 101 ITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARD 148 T H PK + VG+ ID D S +KP + TA +LA++ Sbjct: 301 YTQHQPKIVTIPVGS-IDSLTDSS-------QGRKPFSLITASRLAKE 340 >4M0X-A nrPDB Length = 371 Score = 26.2 bits (56), Expect = 8.7, Method: Compositional matrix adjust. Identities = 10/25 (40%), Positives = 16/25 (64%) Query: 31 EYVPTVFDNYAVTVMIGGEPYTLGL 55 E + T+ D Y V+IG +P T+G+ Sbjct: 64 ETIKTIIDQYLAPVIIGRDPSTIGV 88 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3VHL-B nrPDB 265 9e-72 5C2K-A nrPDB 252 7e-68 3TH5-A nrPDB 251 1e-67 3RYT-C nrPDB 251 2e-67 5ZHX-e nrPDB 250 3e-67 1RYH-A nrPDB 247 3e-66 2WKQ-A nrPDB 245 1e-65 2W2X-A nrPDB 243 3e-65 5JCP-B nrPDB 236 5e-63 2ATX-A nrPDB 235 1e-62 2J0V-A nrPDB 233 4e-62 2WBL-C nrPDB 232 6e-62 2NTY-C nrPDB 231 2e-61 2FV8-A nrPDB 230 2e-61 3BWD-D nrPDB 230 2e-61 2J1L-A nrPDB 229 4e-61 2Q3H-A nrPDB 226 5e-60 5ZVP-A nrPDB 223 4e-59 3A58-B nrPDB 222 5e-59 5VCU-A nrPDB 222 6e-59 4U5X-A nrPDB 221 2e-58 4MIT-A nrPDB 213 4e-56 1GWN-A nrPDB 200 3e-52 1M7B-A nrPDB 198 1e-51 4M8N-E nrPDB 194 2e-50 2RHD-A nrPDB 193 3e-50 5SZI-A nrPDB 193 4e-50 4LHX-A nrPDB 193 4e-50 5SZH-B nrPDB 192 9e-50 3L0I-B nrPDB 191 1e-49 4DXA-A nrPDB 189 6e-49 3CUE-F nrPDB 188 1e-48 1WMS-A nrPDB 188 1e-48 4QXA-A nrPDB 188 1e-48 1Z0A-A nrPDB 188 1e-48 1YZN-A nrPDB 187 2e-48 1Z0F-A nrPDB 187 2e-48 4KLZ-A nrPDB 187 2e-48 5SZJ-A nrPDB 187 2e-48 3CPH-A nrPDB 186 3e-48 2A5J-A nrPDB 186 3e-48 5FBL-B nrPDB 186 4e-48 2WWX-A nrPDB 186 6e-48 6IF2-B nrPDB 186 7e-48 6O62-A nrPDB 185 9e-48 5LPN-A nrPDB 185 9e-48 2OCB-A nrPDB 185 1e-47 3CPJ-B nrPDB 184 2e-47 1X3S-A nrPDB 184 2e-47 2OCY-C nrPDB 184 2e-47 2F9L-A nrPDB 183 4e-47 4RKE-A nrPDB 183 4e-47 5LDD-C nrPDB 182 7e-47 2GF9-A nrPDB 182 7e-47 2REX-B nrPDB 182 8e-47 2O52-A nrPDB 181 1e-46 1ZBD-A nrPDB 181 1e-46 5LEF-A nrPDB 181 2e-46 5XR6-A nrPDB 181 2e-46 4RKF-A nrPDB 181 2e-46 2HEI-A nrPDB 180 2e-46 5HZH-A nrPDB 180 3e-46 4UJ4-A nrPDB 180 3e-46 5UB8-A nrPDB 180 4e-46 3RAB-A nrPDB 180 4e-46 3REG-A nrPDB 179 8e-46 4PHF-A nrPDB 178 1e-45 4G01-B nrPDB 178 1e-45 2FG5-A nrPDB 178 1e-45 2IL1-A nrPDB 178 1e-45 1TU4-A nrPDB 178 1e-45 2BMD-A nrPDB 178 1e-45 3DZ8-A nrPDB 178 2e-45 2G6B-A nrPDB 177 2e-45 2EW1-A nrPDB 177 3e-45 1EK0-A nrPDB 177 3e-45 2HUP-A nrPDB 176 5e-45 2FFQ-A nrPDB 176 7e-45 3RWM-B nrPDB 175 9e-45 5CM8-B nrPDB 173 3e-44 2ERX-A nrPDB 173 5e-44 6IYB-A nrPDB 172 8e-44 5YOZ-A nrPDB 171 1e-43 2G77-B nrPDB 171 1e-43 2GIL-A nrPDB 171 1e-43 2F7S-A nrPDB 171 2e-43 3BFK-A nrPDB 171 2e-43 1YVD-A nrPDB 171 2e-43 3TSO-A nrPDB 170 2e-43 1Z06-A nrPDB 170 2e-43 6HUF-A nrPDB 169 6e-43 1D5C-A nrPDB 168 1e-42 2KE5-A nrPDB 168 1e-42 1ZC4-A nrPDB 167 2e-42 3BC1-A nrPDB 167 2e-42 2IEZ-A nrPDB 166 4e-42 3CON-A nrPDB 166 6e-42 1YZU-A nrPDB 165 8e-42 2IEY-A nrPDB 165 9e-42 5WDQ-A nrPDB 165 1e-41 5UHV-A nrPDB 165 1e-41 2P5S-A nrPDB 165 1e-41 4WA7-A nrPDB 164 2e-41 2ERY-A nrPDB 162 8e-41 5WDR-A nrPDB 161 1e-40 4KU4-A nrPDB 161 2e-40 3OES-A nrPDB 161 2e-40 1Z22-A nrPDB 161 2e-40 3CBQ-A nrPDB 160 3e-40 2FN4-A nrPDB 159 8e-40 2ATV-A nrPDB 158 9e-40 4FMC-F nrPDB 158 2e-39 2N1B-A nrPDB 156 4e-39 5UWI-A nrPDB 156 5e-39 5CLL-A nrPDB 156 7e-39 2CJW-A nrPDB 155 1e-38 3T5G-A nrPDB 155 1e-38 3Q85-A nrPDB 155 1e-38 2G3Y-A nrPDB 154 2e-38 2GF0-A nrPDB 153 3e-38 3WYF-A nrPDB 153 4e-38 5XOJ-A nrPDB 152 7e-38 3PIR-A nrPDB 151 1e-37 3RAP-R nrPDB 149 6e-37 4CZ2-A nrPDB 148 2e-36 6FF8-A nrPDB 146 4e-36 2NZJ-A nrPDB 145 1e-35 5XC3-A nrPDB 145 1e-35 3E5H-A nrPDB 135 9e-33 4DJT-A nrPDB 131 1e-31 3CLV-A nrPDB 129 9e-31 3C5C-A nrPDB 128 2e-30 3IHW-A nrPDB 122 9e-29 5C1S-A nrPDB 118 1e-27 3DPU-A nrPDB 108 2e-24 3D6T-B nrPDB 106 6e-24 Sequences not found previously or not previously below threshold: 4KYI-B nrPDB 172 7e-44 3Q72-A nrPDB 133 5e-32 6HLU-A nrPDB 109 8e-25 2IWR-A nrPDB 95 2e-20 4WNR-A nrPDB 91 3e-19 2AL7-A nrPDB 83 8e-17 4ILE-A nrPDB 81 3e-16 2YC4-C nrPDB 79 2e-15 3LRP-A nrPDB 70 7e-13 1YZG-A nrPDB 70 9e-13 4YLG-A nrPDB 69 1e-12 3LVQ-E nrPDB 69 1e-12 2H16-A nrPDB 68 2e-12 2A5F-A nrPDB 68 4e-12 6FAE-B nrPDB 67 4e-12 3O47-A nrPDB 66 1e-11 6BBQ-A nrPDB 65 2e-11 5NZV-F nrPDB 65 2e-11 3AQ4-A nrPDB 63 6e-11 1Z6X-A nrPDB 63 7e-11 6DFF-C nrPDB 63 7e-11 1J2J-A nrPDB 63 9e-11 4ZI3-A nrPDB 63 1e-10 5UF8-A nrPDB 62 1e-10 4C0K-A nrPDB 62 1e-10 2B6H-A nrPDB 61 3e-10 1MOZ-A nrPDB 59 1e-09 3BH6-A nrPDB 59 1e-09 5EE5-B nrPDB 58 2e-09 1KSG-A nrPDB 57 6e-09 3GEH-A nrPDB 53 7e-08 2H57-A nrPDB 53 1e-07 4V0N-A nrPDB 52 2e-07 5DE3-A nrPDB 51 3e-07 2GJ9-A nrPDB 51 4e-07 4ARZ-A nrPDB 51 4e-07 2GAO-A nrPDB 50 5e-07 6CES-A nrPDB 49 9e-07 1XZP-A nrPDB 49 9e-07 2YWH-A nrPDB 48 2e-06 2LKD-A nrPDB 48 2e-06 3J8G-X nrPDB 48 3e-06 1M2O-B nrPDB 48 4e-06 6GNI-B nrPDB 47 5e-06 2X77-A nrPDB 47 5e-06 1F6B-A nrPDB 46 1e-05 5IMR-C nrPDB 45 2e-05 5J8B-z nrPDB 45 2e-05 5DN8-A nrPDB 44 3e-05 2DYK-A nrPDB 44 3e-05 3T1O-A nrPDB 44 4e-05 1MKY-A nrPDB 43 6e-05 5DI3-B nrPDB 43 6e-05 4M9Q-A nrPDB 43 6e-05 5KU1-A nrPDB 43 1e-04 5KSO-A nrPDB 43 1e-04 3JB9-B nrPDB 42 2e-04 5LAD-A nrPDB 42 2e-04 5YMX-A nrPDB 42 2e-04 6IAE-A nrPDB 41 2e-04 3EC1-A nrPDB 41 2e-04 2GTP-A nrPDB 41 2e-04 1WF3-A nrPDB 41 3e-04 2QAG-A nrPDB 41 3e-04 3FTQ-A nrPDB 41 3e-04 3R9W-A nrPDB 40 6e-04 3GEE-A nrPDB 40 6e-04 6GDG-D nrPDB 40 7e-04 5KUT-A nrPDB 40 7e-04 3CB4-D nrPDB 39 9e-04 5ZZM-A nrPDB 39 9e-04 2ODE-A nrPDB 39 0.001 6G79-A nrPDB 39 0.001 3V00-C nrPDB 39 0.002 4DCU-A nrPDB 38 0.002 4KJZ-A nrPDB 38 0.002 4B44-A nrPDB 38 0.002 6D4G-A nrPDB 38 0.002 3C5H-A nrPDB 38 0.003 3J4J-A nrPDB 38 0.003 6GB2-BC nrPDB 38 0.003 1SHZ-A nrPDB 37 0.005 3T5D-A nrPDB 37 0.006 5CYO-A nrPDB 37 0.006 2E87-A nrPDB 36 0.010 2QAG-C nrPDB 36 0.012 3H2Y-A nrPDB 36 0.012 5IRR-A nrPDB 36 0.015 5KH0-A nrPDB 35 0.023 3IZY-P nrPDB 35 0.025 3PR1-A nrPDB 34 0.027 3IEU-A nrPDB 34 0.028 2VNE-A nrPDB 34 0.041 5NON-A nrPDB 34 0.042 4TN1-B nrPDB 34 0.048 1HEY-A nrPDB 34 0.049 5YT0-A nrPDB 33 0.060 4QJ3-A nrPDB 33 0.070 4NCL-A nrPDB 33 0.070 4N3G-A nrPDB 33 0.079 2BCJ-Q nrPDB 33 0.079 6D9H-A nrPDB 33 0.086 5FG3-A nrPDB 33 0.086 3LLU-A nrPDB 33 0.089 2CXX-A nrPDB 33 0.10 4WQY-BZ nrPDB 32 0.13 1ZUN-B nrPDB 32 0.14 4V7F-o nrPDB 32 0.14 6OIK-A nrPDB 32 0.15 4YMS-J nrPDB 32 0.16 1TAG-A nrPDB 32 0.17 3K53-A nrPDB 32 0.19 4U00-A nrPDB 32 0.19 4KV9-A nrPDB 31 0.23 6CES-C nrPDB 31 0.27 1PUJ-A nrPDB 31 0.27 2QTH-A nrPDB 31 0.29 1LNZ-A nrPDB 31 0.30 2Q3F-A nrPDB 31 0.32 4V8Y-CP nrPDB 31 0.34 6OIJ-A nrPDB 31 0.36 2YYZ-A nrPDB 31 0.37 1WDT-A nrPDB 31 0.39 2YV5-A nrPDB 31 0.41 5OCH-A nrPDB 31 0.44 5X4B-A nrPDB 31 0.45 2RGK-A nrPDB 31 0.45 2GZA-A nrPDB 31 0.45 4V8Z-CV nrPDB 31 0.48 4NCF-A nrPDB 31 0.48 6HZK-A nrPDB 31 0.48 3WBI-A nrPDB 30 0.50 2ZBL-A nrPDB 30 0.52 3DEF-A nrPDB 30 0.57 1H65-A nrPDB 30 0.57 4CSU-9 nrPDB 30 0.60 4UJC-AB nrPDB 30 0.63 4MRS-A nrPDB 30 0.65 6F1T-i nrPDB 30 0.66 1ZCA-A nrPDB 30 0.69 1YE8-A nrPDB 30 0.70 5M04-A nrPDB 30 0.76 2P8Y-T nrPDB 30 0.78 1YR7-A nrPDB 30 0.82 4TLD-A nrPDB 29 0.84 4MYH-A nrPDB 29 0.89 3A1W-A nrPDB 29 0.89 1ZCB-A nrPDB 29 0.90 1SUL-A nrPDB 29 0.92 6F1Y-j nrPDB 29 0.93 5C78-A nrPDB 29 0.95 3S1A-A nrPDB 29 0.95 5GM6-Y nrPDB 29 0.96 4RY2-A nrPDB 29 1.00 6I3O-A nrPDB 29 1.0 2GA8-A nrPDB 29 1.0 1IRQ-A nrPDB 29 1.1 4V89-AW nrPDB 29 1.1 6N0I-A nrPDB 29 1.2 2WIC-A nrPDB 29 1.2 5H7J-A nrPDB 29 1.3 3A1U-A nrPDB 29 1.4 1IHU-A nrPDB 29 1.4 2P5T-B nrPDB 29 1.4 5H7K-A nrPDB 29 1.6 1G7S-A nrPDB 29 1.6 4N1A-A nrPDB 29 1.7 3GD7-A nrPDB 28 1.9 5B3F-A nrPDB 28 2.0 3G2F-A nrPDB 28 2.0 2WJG-A nrPDB 28 2.0 2PJZ-A nrPDB 28 2.0 3D0O-A nrPDB 28 2.1 2QAG-B nrPDB 28 2.1 2WJI-A nrPDB 28 2.1 5IDV-A nrPDB 28 2.2 5AR1-A nrPDB 28 2.2 4Z54-A nrPDB 28 2.3 5MRE-WW nrPDB 28 2.3 5VHD-D nrPDB 28 2.4 3FVQ-A nrPDB 28 2.4 6BZR-B nrPDB 28 2.5 5TY0-A nrPDB 28 2.5 5ZLU-EE nrPDB 28 2.5 4YPL-A nrPDB 28 2.5 2FGK-A nrPDB 28 2.5 6FT6-s nrPDB 28 2.5 3N5F-A nrPDB 28 2.5 3L9C-A nrPDB 28 2.5 1EZ4-A nrPDB 28 2.6 6G2G-A nrPDB 28 2.6 6FA9-A nrPDB 28 2.6 5TV2-A nrPDB 28 2.6 4R98-A nrPDB 28 2.6 4HZI-A nrPDB 28 2.6 6H7G-A nrPDB 28 2.7 1ZE1-A nrPDB 28 2.8 1U0L-A nrPDB 28 3.1 4O0M-A nrPDB 28 3.1 3LLM-A nrPDB 28 3.1 4V7D-BZ nrPDB 28 3.2 1ZO1-I nrPDB 28 3.2 2OUK-A nrPDB 28 3.3 5MKK-A nrPDB 28 3.4 5B57-C nrPDB 28 3.4 4YPN-A nrPDB 28 3.5 4FID-A nrPDB 28 3.5 1NI3-A nrPDB 28 3.6 5A9Z-CA nrPDB 28 3.7 5JWO-A nrPDB 28 3.8 6G12-A nrPDB 28 3.8 3PV0-A nrPDB 28 4.0 2NQL-A nrPDB 28 4.0 1IQP-A nrPDB 28 4.1 5D4W-A nrPDB 27 4.1 2IW3-A nrPDB 27 4.2 6QUZ-B nrPDB 27 4.2 5JSZ-B nrPDB 27 4.2 4KXX-A nrPDB 27 4.2 1JAL-A nrPDB 27 4.3 4A9A-A nrPDB 27 4.3 6ED3-A nrPDB 27 4.4 5OFO-C nrPDB 27 4.4 4XD7-D nrPDB 27 4.5 4CIU-A nrPDB 27 4.6 1JBK-A nrPDB 27 4.6 2P65-A nrPDB 27 4.8 6C2V-A nrPDB 27 4.9 1QVR-A nrPDB 27 4.9 6FKI-F nrPDB 27 5.1 5LKM-A nrPDB 27 5.1 4AC9-A nrPDB 27 5.1 2W6I-D nrPDB 27 5.2 4V6V-A1 nrPDB 27 5.2 6MTD-v nrPDB 27 5.4 3B5X-A nrPDB 27 5.4 1R6B-X nrPDB 27 5.5 3K8N-A nrPDB 27 5.6 1Z5Y-E nrPDB 27 5.6 4Q7L-A nrPDB 27 5.6 5LZT-jj nrPDB 27 5.6 3JCN-b nrPDB 27 5.6 3VX4-A nrPDB 27 5.7 5ZME-A nrPDB 27 6.0 5CDF-E nrPDB 27 6.0 2XND-D nrPDB 27 6.0 6HA8-V nrPDB 27 6.0 4HSE-A nrPDB 27 6.3 4NAR-A nrPDB 27 6.6 3L43-A nrPDB 27 6.6 2AKA-B nrPDB 27 6.8 3PXG-A nrPDB 27 6.8 3J3U-A nrPDB 27 6.9 1WXQ-A nrPDB 27 7.0 6GUA-A nrPDB 26 7.1 4MKI-B nrPDB 26 7.1 4D61-i nrPDB 26 7.1 4UUD-B nrPDB 26 7.2 2X2E-A nrPDB 26 7.3 3PXI-A nrPDB 26 7.4 5TV4-A nrPDB 26 7.6 3AEK-B nrPDB 26 8.1 6EMW-E nrPDB 26 8.2 3ZJC-A nrPDB 26 8.4 6EM8-A nrPDB 26 8.6 6MAT-A nrPDB 26 8.7 4XGC-E nrPDB 26 8.8 2XTZ-A nrPDB 26 8.8 5A3F-A nrPDB 26 8.9 6DLV-b nrPDB 26 9.7 5DGX-A nrPDB 26 9.7 >3VHL-B nrPDB Length = 195 Score = 265 bits (678), Expect = 9e-72, Method: Composition-based stats. Identities = 186/187 (99%), Positives = 186/187 (99%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 MQTIKCVVVGDGAVGK CLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG Sbjct: 8 MQTIKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 67 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR 120 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR Sbjct: 68 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR 127 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP 180 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP Sbjct: 128 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP 187 Query: 181 EPKKSRR 187 EPKKSRR Sbjct: 188 EPKKSRR 194 >5C2K-A nrPDB Length = 415 Score = 252 bits (644), Expect = 7e-68, Method: Composition-based stats. Identities = 100/187 (53%), Positives = 130/187 (69%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY + + G+ L L+DTAGQEDY Sbjct: 14 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 73 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 124 DRLRPLSYP TDV L+CFS+ SP S EN+ EKW PE+ H CP P +LVG + DLR+D Sbjct: 74 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 133 Query: 125 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKK 184 T +LAK KQ+P+ PE +A + A Y+ECSA T+ G++ VF+ A AAL+ KK Sbjct: 134 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGKK 193 Query: 185 SRRCVLL 191 C++L Sbjct: 194 KSGCLVL 200 >3TH5-A nrPDB Length = 204 Score = 251 bits (641), Expect = 1e-67, Method: Composition-based stats. Identities = 127/176 (72%), Positives = 147/176 (83%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 Q IKCVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAGQ Sbjct: 29 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQ 88 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 EDYDRLRPLSYPQTDVFL+CFS+VSP+SFENV+ KW PE+ HHCP TP +LVGT++DLRD Sbjct: 89 EDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRD 148 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 D TIEKL + K PIT +A+++ AVKY+ECSALTQ+GLK VFDEAI A L Sbjct: 149 DKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 204 >3RYT-C nrPDB Length = 180 Score = 251 bits (641), Expect = 2e-67, Method: Composition-based stats. Identities = 127/177 (71%), Positives = 147/177 (83%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 MQ IKCVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAG Sbjct: 4 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 63 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR 120 EDYDRLRPLSYPQTDVFL+CFS+VSP+SFENV+ KW PE+ HHCP TP +LVGT++DLR Sbjct: 64 LEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR 123 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 DD TIEKL + K PIT +A+++ AVKY+ECSALTQ+GLK VFDEAI A L Sbjct: 124 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVL 180 >5ZHX-e nrPDB Length = 198 Score = 250 bits (638), Expect = 3e-67, Method: Composition-based stats. Identities = 99/186 (53%), Positives = 129/186 (69%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY + + G+ L L+DTAGQEDY Sbjct: 12 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 71 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 124 DRLRPLSYP TDV L+CFS+ SP S EN+ EKW PE+ H CP P +LVG + DLR+D Sbjct: 72 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 131 Query: 125 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKK 184 T +LAK KQ+P+ PE +A + A Y+ECSA T+ G++ VF+ A AAL+ KK Sbjct: 132 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQARRGKK 191 Query: 185 SRRCVL 190 C++ Sbjct: 192 KSGCLV 197 >1RYH-A nrPDB Length = 203 Score = 247 bits (630), Expect = 3e-66, Method: Composition-based stats. Identities = 129/199 (64%), Positives = 149/199 (74%), Gaps = 19/199 (9%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 MQ IKCVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAG Sbjct: 3 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 62 Query: 61 QEDYDRLRPLSYPQ-------------------TDVFLVCFSVVSPSSFENVKEKWVPEI 101 QEDYDRLRPLSYPQ DVFL+CFS+VSP+SFENV+ KW PE+ Sbjct: 63 QEDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEV 122 Query: 102 THHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALT 161 HHCP TP +LVGT++DLRDD TIEKL + K PIT +A+++ AVKY+ECSALT Sbjct: 123 RHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALT 182 Query: 162 QKGLKNVFDEAILAALEPP 180 Q+GLK VFDEAI A L PP Sbjct: 183 QRGLKTVFDEAIRAVLCPP 201 >2WKQ-A nrPDB Length = 332 Score = 245 bits (625), Expect = 1e-65, Method: Composition-based stats. Identities = 125/177 (70%), Positives = 146/177 (82%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63 IKCVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAG ED Sbjct: 156 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGLED 215 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDP 123 YDRLRPLSYPQTDVFL+CFS+VSP+SF +V+ KW PE+ HHCP TP +LVGT++DLRDD Sbjct: 216 YDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEVRHHCPNTPIILVGTKLDLRDDK 275 Query: 124 STIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP 180 TIEKL + K PIT +A+++ AVKY+ECSALTQ+GLK VFDEAI A L PP Sbjct: 276 DTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP 332 >2W2X-A nrPDB Length = 185 Score = 243 bits (621), Expect = 3e-65, Method: Composition-based stats. Identities = 125/178 (70%), Positives = 146/178 (82%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 Q IKCVVVGD AVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ +P LGL+DTAGQ Sbjct: 8 QAIKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQ 67 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 EDYDRLRPLSYPQTDVFL+CFS+VSP+S+ENV+ KW PE+ HHCP TP +LVGT++DLRD Sbjct: 68 EDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLRD 127 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 D TIEKL + K PIT LA+++ +VKY+ECSALTQ+GLK VFDEAI A L P Sbjct: 128 DKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVLCP 185 >5JCP-B nrPDB Length = 419 Score = 236 bits (602), Expect = 5e-63, Method: Composition-based stats. Identities = 96/174 (55%), Positives = 123/174 (70%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K V+VGDGA GKTCLLI + ++FP YVPTVF+NY + + G+ L L+DTAGQEDY Sbjct: 245 KLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 304 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 124 DRLRPLSYP TDV L+CFS+ SP S EN+ EKW PE+ H CP P +LVG + DLR+D Sbjct: 305 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 364 Query: 125 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 T +LAK KQ+P+ PE +A + A Y+ECSA T+ G++ VF+ A AAL+ Sbjct: 365 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAALQ 418 >2ATX-A nrPDB Length = 194 Score = 235 bits (599), Expect = 1e-62, Method: Composition-based stats. Identities = 124/176 (70%), Positives = 148/176 (84%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63 +KCVVVGDGAVGKTCLL+SY + FP EYVPTVFD+YAV+V +GG+ Y LGL+DTAGQED Sbjct: 19 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 78 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDP 123 YDRLRPLSYP TDVFL+CFSVV+P+SF+NVKE+WVPE+ + P PFLL+GTQIDLRDDP Sbjct: 79 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDP 138 Query: 124 STIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 T+ +L K+KPI E +KLA+++ A YVECSALTQKGLK VFDEAI+A L P Sbjct: 139 KTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTP 194 >2J0V-A nrPDB Length = 212 Score = 233 bits (594), Expect = 4e-62, Method: Composition-based stats. Identities = 95/184 (51%), Positives = 129/184 (70%), Gaps = 4/184 (2%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63 IKCV VGDGAVGKTC+LI YT+NKFP++Y+PTVFDN++ V + G+ LGL+DTAGQED Sbjct: 10 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWDTAGQED 69 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDP 123 Y RLRPLSY D+F++ FS++S +S+ENV +KW+PE+ P P +LVGT++DLRDD Sbjct: 70 YSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRDDK 129 Query: 124 STIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPK 183 + + IT E+L + + A Y+ECS+ TQ+ +K VFD AI L+PP K Sbjct: 130 GYLA----DHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAIKVVLQPPRRK 185 Query: 184 KSRR 187 + R Sbjct: 186 EVPR 189 >2WBL-C nrPDB Length = 180 Score = 232 bits (592), Expect = 6e-62, Method: Composition-based stats. Identities = 97/178 (54%), Positives = 130/178 (73%), Gaps = 2/178 (1%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + IKCV VGDGAVGKTC+LISYT N FP++YVPTVFDN++ V++ G LGL+DTAGQ Sbjct: 5 RFIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQ 64 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 EDY+RLRPLSY DVFL+ FS++S +S+EN+ +KW+PE+ H+ P P +LVGT++DLRD Sbjct: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKLDLRD 124 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 D ++ IT E+L + + AV+Y+ECS+ TQ+ +K VFD AI AL P Sbjct: 125 DKQFLK--DHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVALRP 180 >2NTY-C nrPDB Length = 180 Score = 231 bits (589), Expect = 2e-61, Method: Composition-based stats. Identities = 95/178 (53%), Positives = 129/178 (72%), Gaps = 2/178 (1%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + IKCV VGDGAVGKTC+LISYT+N FP++YVPTVFDN++ V++ G LGL+DTAGQ Sbjct: 5 RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQ 64 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 EDY+RLRPLSY DVF++ FS++S +S+ENV +KW+PE+ H+ P P +LVGT++DLRD Sbjct: 65 EDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRD 124 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 D + PIT E+L + + + Y+ECS+ TQ+ +K VFD AI L+P Sbjct: 125 DKQFF--IDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVLQP 180 >2FV8-A nrPDB Length = 207 Score = 230 bits (588), Expect = 2e-61, Method: Composition-based stats. Identities = 94/181 (51%), Positives = 125/181 (69%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K VVVGDGA GKTCLLI ++ ++FP YVPTVF+NY + + G+ L L+DTAGQEDY Sbjct: 27 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 86 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 124 DRLRPLSYP TDV L+CFSV SP S EN+ EKWVPE+ H CP P +LV + DLR D Sbjct: 87 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 146 Query: 125 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKK 184 +LA+ KQ+P+ + +A ++A Y+ECSA T++G++ VF+ A AAL+ + Sbjct: 147 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRYGSQ 206 Query: 185 S 185 + Sbjct: 207 N 207 >3BWD-D nrPDB Length = 182 Score = 230 bits (588), Expect = 2e-61, Method: Composition-based stats. Identities = 96/178 (53%), Positives = 129/178 (72%), Gaps = 2/178 (1%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + IKCV VGDGAVGKTCLLISYT+N FP++YVPTVFDN++ V++ G LGL+DTAGQ Sbjct: 7 RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQ 66 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 EDY+RLRPLSY DVF++ FS++S +S+ENV +KW+PE+ H+ P P +LVGT++DLRD Sbjct: 67 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRD 126 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 D + PIT E+L + + A Y+ECS+ +Q+ +K VFD AI L+P Sbjct: 127 DKQFF--IDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVLQP 182 >2J1L-A nrPDB Length = 214 Score = 229 bits (585), Expect = 4e-61, Method: Composition-based stats. Identities = 82/177 (46%), Positives = 115/177 (64%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 ++++K V+VGDG GKT LL+ + FP Y PTVF+ Y V + + G+P L ++DTAG Sbjct: 32 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 91 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR 120 Q+DYDRLRPL YP V L+CF V SP+SF+N+ +W PE+ H C K P ++VG + DLR Sbjct: 92 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLR 151 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 D S + KL +N +P+T +++AR + AV Y+ECSA + VF EA AL Sbjct: 152 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 208 >2Q3H-A nrPDB Length = 201 Score = 226 bits (576), Expect = 5e-60, Method: Composition-based stats. Identities = 107/181 (59%), Positives = 140/181 (77%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63 +KCV+VGDGAVGKT L++SYTTN +P+EY+PT FDN++ V + G P L L DTAGQ++ Sbjct: 21 VKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQDE 80 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDP 123 +D+LRPL Y TD+FL+CFSVVSPSSF+NV EKWVPEI HCPK P +LVGTQ DLR+D Sbjct: 81 FDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLREDV 140 Query: 124 STIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPK 183 + +L K K+KP+ E A+ LA ++KA Y+ECSALTQK LK VFD AI+A ++ + + Sbjct: 141 KVLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFDAAIVAGIQYSDTQ 200 Query: 184 K 184 + Sbjct: 201 Q 201 >5ZVP-A nrPDB Length = 181 Score = 223 bits (568), Expect = 4e-59, Method: Composition-based stats. Identities = 96/173 (55%), Positives = 123/173 (71%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K V+VGDGA GKTCLLI + FP YVPTVF+NY V + G+ L L+DTAGQEDY Sbjct: 7 KLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAGQEDY 66 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 124 DRLRPLSYP + V L+CF++ SP S +NV+EKW+ E+ H C P +LVG + DLR DP Sbjct: 67 DRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVLHFCQGLPIILVGCKKDLRHDPK 126 Query: 125 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 TIE+L K QKP+TPE E++ + + A KY+ECSA T +G++ VF+ A AAL Sbjct: 127 TIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAAL 179 >3A58-B nrPDB Length = 188 Score = 222 bits (567), Expect = 5e-59, Method: Composition-based stats. Identities = 91/174 (52%), Positives = 120/174 (68%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K V+VGDGA GKTCLLI + +FP YVPTVF+NY V + G L L+DTAGQEDY Sbjct: 12 KLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDY 71 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 124 DRLRPLSYP ++V L+CFS+ P S ENV+EKW+ E+ H C P +LVG ++DLR+DP Sbjct: 72 DRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQ 131 Query: 125 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 TIE+L + Q+P+T + + +A + A Y ECSA T G++ VF+ A A+L Sbjct: 132 TIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLM 185 >5VCU-A nrPDB Length = 208 Score = 222 bits (567), Expect = 6e-59, Method: Composition-based stats. Identities = 98/200 (49%), Positives = 133/200 (66%), Gaps = 9/200 (4%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 M++IKCVVVGDGAVGKT LLI+Y++ FP +YVPTVFDNY + G ++ L+DTAG Sbjct: 9 MESIKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYNKNIPYGDGIVSIALYDTAG 68 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR 120 QEDYDRLRPLSYP TDVFLVCFS+ +P+S EN KW E+ H+ P TP +LVGT++DL+ Sbjct: 69 QEDYDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHYNPDTPIVLVGTKLDLK 128 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP- 179 D ++KL + K P+T E +++ +KA Y+ECSA T + L F+ AI A++ Sbjct: 129 KDEEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIAMKQR 188 Query: 180 --------PEPKKSRRCVLL 191 + ++C LL Sbjct: 189 LKDAPPTANARNQKKKCQLL 208 >4U5X-A nrPDB Length = 178 Score = 221 bits (563), Expect = 2e-58, Method: Composition-based stats. Identities = 92/177 (51%), Positives = 126/177 (71%), Gaps = 2/177 (1%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + IKCV VGDGAVGKTC+LI YT+NKFP++Y+PTVFDN++ V + G LGL+DTAG Sbjct: 4 RFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGSVVNLGLWDTAGL 63 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 EDY RLRPLSY DVF++ FS++S +S+ENV++KW+PE+ P P +LVGT++DLR+ Sbjct: 64 EDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGVPVVLVGTKLDLRE 123 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 D + + IT E E+L + + AV Y+ECS+ TQ+ +K VFD AI L+ Sbjct: 124 DRAYLA--DHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAIKVVLQ 178 >4MIT-A nrPDB Length = 186 Score = 213 bits (543), Expect = 4e-56, Method: Composition-based stats. Identities = 95/178 (53%), Positives = 123/178 (69%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 +IK VVVGDGAVGKTCLLISY+ KFP +Y+PTVFDNY V++ G L L+DTAG Sbjct: 9 TSIKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTAGTRQIQLALWDTAGL 68 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 E+YD+LRPLSY +FL+CFSV S S++NV KW PE+ H PK P +LVGT++D R+ Sbjct: 69 EEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFAPKVPIILVGTKLDTRN 128 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 DP+ +++L + I E+L +KAVKY+ECSA T + LK VFDEA+ L Sbjct: 129 DPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTVFDEAVKTVLMN 186 >1GWN-A nrPDB Length = 205 Score = 200 bits (509), Expect = 3e-52, Method: Composition-based stats. Identities = 73/176 (41%), Positives = 107/176 (60%), Gaps = 1/176 (0%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K VVVGD GKT LL + + FP YVPTVF+NY + I + L L+DT+G Y Sbjct: 30 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYY 89 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 124 D +RPLSYP +D L+CF + P + ++V +KW EI CP T LLVG + DLR D S Sbjct: 90 DNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVS 149 Query: 125 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKG-LKNVFDEAILAALEP 179 T+ +L+ ++Q P++ + +A+ + A Y+ECSAL + ++++F A LA + Sbjct: 150 TLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNK 205 >1M7B-A nrPDB Length = 184 Score = 198 bits (504), Expect = 1e-51, Method: Composition-based stats. Identities = 73/176 (41%), Positives = 107/176 (60%), Gaps = 1/176 (0%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K VVVGD GKT LL + + FP YVPTVF+NY + I + L L+DT+G Y Sbjct: 9 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYY 68 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 124 D +RPLSYP +D L+CF + P + ++V +KW EI CP T LLVG + DLR D S Sbjct: 69 DNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVS 128 Query: 125 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKG-LKNVFDEAILAALEP 179 T+ +L+ ++Q P++ + +A+ + A Y+ECSAL + ++++F A LA + Sbjct: 129 TLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNK 184 >4M8N-E nrPDB Length = 199 Score = 194 bits (494), Expect = 2e-50, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 13/177 (7%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 M+ K VV+G G VGK+ L + + F +Y PT+ D+Y V + + L + DTAG Sbjct: 4 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG 63 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT-HHCPKTPFLLVGTQIDL 119 E + +R L F + +S+ + S+F ++++ + P +LVG + DL Sbjct: 64 TEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDL 123 Query: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 D ++ + E + LAR ++E SA ++ + +F + + Sbjct: 124 ED------------ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 168 >2RHD-A nrPDB Length = 175 Score = 193 bits (492), Expect = 3e-50, Method: Composition-based stats. Identities = 43/172 (25%), Positives = 80/172 (46%), Gaps = 16/172 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K +++GD VGK+CLL+ + + + Y+ T+ ++ T+ + + L ++DTAGQE Sbjct: 10 FKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQE 69 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 + + Y ++ + V SF+NVK+ W+ EI + LLVG + DL Sbjct: 70 RFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAMENVNKLLVGNKCDLV- 127 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173 ++ +T + +LA +K++E SA ++ F Sbjct: 128 -----------SKRVVTSDEGRELADS-HGIKFIETSAKNAYNVEQAFHTMA 167 >5SZI-A nrPDB Length = 209 Score = 193 bits (491), Expect = 4e-50, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 16/182 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K +++GD VGKTC+L ++ + F S ++ T+ ++ T+ + G+ L ++DTAGQE Sbjct: 11 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 70 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-KTPFLLVGTQIDLRD 121 + + Y ++ + + + SF+N++ W+ I H +++G + D+ D Sbjct: 71 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIR-NWIRNIEEHASADVEKMILGNKCDVND 129 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 ++ ++ E EKLA D +K++E SA ++N F + Sbjct: 130 ------------KRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLARDIKAKMD 176 Query: 182 PK 183 K Sbjct: 177 KK 178 >4LHX-A nrPDB Length = 186 Score = 193 bits (491), Expect = 4e-50, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 16/182 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K +++GD VGKTC+L ++ + F S ++ T+ ++ T+ + G+ L ++DTAGQE Sbjct: 11 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 70 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-KTPFLLVGTQIDLRD 121 + + Y ++ + + + SF+N++ W+ I H +++G + D+ D Sbjct: 71 RFRTITTAYYRGAMGIMLVYDITNEKSFDNIR-NWIRNIEEHASADVEKMILGNKCDVND 129 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 ++ ++ E EKLA D +K++E SA ++N F + Sbjct: 130 ------------KRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLARDIKAKMD 176 Query: 182 PK 183 K Sbjct: 177 KK 178 >5SZH-B nrPDB Length = 203 Score = 192 bits (488), Expect = 9e-50, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 16/181 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K +++GD VGK+CLL+ + + + Y+ T+ ++ T+ + G+ L ++DTAGQE Sbjct: 11 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 70 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 + + Y +V + V S+ NVK+ W+ EI + LLVG + DL Sbjct: 71 RFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYASENVNKLLVGNKSDLTT 129 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 +K + TA++ A L + ++E SA ++ F + Sbjct: 130 ------------KKVVDNTTAKEFADSLG-IPFLETSAKNATNVEQAFMTMAAEIKKRMG 176 Query: 182 P 182 P Sbjct: 177 P 177 >3L0I-B nrPDB Length = 199 Score = 191 bits (486), Expect = 1e-49, Method: Composition-based stats. Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 16/175 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K +++GD VGK+CLL+ + + + Y+ T+ ++ T+ + G+ L ++DTAGQE Sbjct: 34 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 93 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 + + Y +V + V SF NVK+ W+ EI + LLVG + DL Sbjct: 94 RFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGNKCDLTT 152 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 +K + TA++ A L + ++E SA ++ F Sbjct: 153 ------------KKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMAAEI 194 >4DXA-A nrPDB Length = 169 Score = 189 bits (481), Expect = 6e-49, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 13/177 (7%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 M+ K VV+G VGK+ L + + F +Y PT+ D+Y V + + L + DTAG Sbjct: 3 MREYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAG 62 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT-HHCPKTPFLLVGTQIDL 119 E + +R L F + +S+ + S+F ++++ + P +LVG + DL Sbjct: 63 TEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDL 122 Query: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 D ++ + E + LAR ++E SA ++ + +F + + Sbjct: 123 ED------------ERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 167 >3CUE-F nrPDB Length = 206 Score = 188 bits (478), Expect = 1e-48, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 16/182 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K +++G+ VGK+CLL+ ++ + + ++Y+ T+ ++ TV + G+ L ++DTAGQE Sbjct: 9 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 68 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPF-LLVGTQIDLRD 121 + + Y + ++ + V SF VK W+ EI + T LLVG + DL+D Sbjct: 69 RFRTITSSYYRGSHGIIIVYDVTDQESFNGVK-MWLQEIDRYATSTVLKLLVGNKCDLKD 127 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 ++ + + A++ A D + ++E SAL +++ F E Sbjct: 128 ------------KRVVEYDVAKEFA-DANKMPFLETSALDSTNVEDAFLTMARQIKESMS 174 Query: 182 PK 183 + Sbjct: 175 QQ 176 >1WMS-A nrPDB Length = 177 Score = 188 bits (478), Expect = 1e-48, Method: Composition-based stats. Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 20/184 (10%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K +++GDG VGK+ L+ Y TNKF ++ T+ + + + G T+ ++DTAGQE Sbjct: 8 FKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQE 67 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-----KTPFLLVGTQI 117 + LR Y +D L+ FSV SF+N+ W E ++ PF+++G +I Sbjct: 68 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESFPFVILGNKI 126 Query: 118 DLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 D+ ++ ++ E A+ RD Y E SA + F+EA+ L Sbjct: 127 DI-------------SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 173 Query: 178 EPPE 181 + Sbjct: 174 ATED 177 >4QXA-A nrPDB Length = 208 Score = 188 bits (478), Expect = 1e-48, Method: Composition-based stats. Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 20/187 (10%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K +++GDG VGK+ L+ Y TNKF S+ T+ + + + G T+ ++DTAG E Sbjct: 9 FKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGLE 68 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-----KTPFLLVGTQI 117 + LR Y +D L+ FSV SF+N+ W E ++ PF+++G + Sbjct: 69 RFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLS-NWKKEFIYYADVKEPESFPFVILGNKT 127 Query: 118 DLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 D+ K++ ++ E A+ +D Y E SA + F+EA+ L Sbjct: 128 DI-------------KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRIL 174 Query: 178 EPPEPKK 184 + + Sbjct: 175 ATEDRSE 181 >1Z0A-A nrPDB Length = 174 Score = 188 bits (477), Expect = 1e-48, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 16/168 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQE 62 K +++GD VGK+CLL+ +T +F + T+ + A + I G+ L ++DTAGQE Sbjct: 11 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 70 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 + + Y L+ + + +F ++ W+ + H +L+G + DL Sbjct: 71 SFRSITRSYYRGAAGALLVYDITRRDTFNHLTT-WLEDARQHSNSNMVIMLIGNKSDLE- 128 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 ++ + E E AR+ + ++E SA T ++ F Sbjct: 129 -----------SRREVKKEEGEAFARE-HGLIFMETSAKTASNVEEAF 164 >1YZN-A nrPDB Length = 185 Score = 187 bits (476), Expect = 2e-48, Method: Composition-based stats. Identities = 46/178 (25%), Positives = 88/178 (49%), Gaps = 16/178 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K +++G+ VGK+CLL+ ++ + + ++Y+ T+ ++ TV + G+ L ++DTAGQE Sbjct: 22 FKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 81 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPF-LLVGTQIDLRD 121 + + Y + ++ + V SF VK W+ EI + T LLVG + DL+D Sbjct: 82 RFRTITSSYYRGSHGIIIVYDVTDQESFNGVK-MWLQEIDRYATSTVLKLLVGNKCDLKD 140 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 ++ + + A++ A D + ++E SAL +++ F E Sbjct: 141 ------------KRVVEYDVAKEFA-DANKMPFLETSALDSTNVEDAFLTMARQIKES 185 >1Z0F-A nrPDB Length = 179 Score = 187 bits (476), Expect = 2e-48, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 14/177 (7%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTV-MIGGEPYTLGLFDTAGQE 62 K +++GD VGK+CLL +T KF ++ T+ + + + G+ L ++DTAGQE Sbjct: 16 FKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 75 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDD 122 + + Y L+ + + S++ ++ P T +L+G + DL Sbjct: 76 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLE-- 133 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 Q+ +T E A++ A + + ++E SA T + +++ F EA + Sbjct: 134 ----------AQRDVTYEEAKQFAEE-NGLLFLEASAKTGENVEDAFLEAAKKIYQN 179 >4KLZ-A nrPDB Length = 173 Score = 187 bits (476), Expect = 2e-48, Method: Composition-based stats. Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 14/176 (7%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + K V++G G VGK+ + + + +++FP ++ PT+ D Y + + I EP L + DTAGQ Sbjct: 4 REYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQ 63 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKE-KWVPEITHHCPKTPFLLVGTQIDLR 120 ++ +R + F++C+S+ SF V+E K + TP +LVG + DL+ Sbjct: 64 AEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLK 123 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 + + +T E LAR+ + + E SA + + +VF + Sbjct: 124 ------------QLRQVTKEEGLALAREF-SCPFFETSAAYRYYIDDVFHALVREI 166 >5SZJ-A nrPDB Length = 202 Score = 187 bits (476), Expect = 2e-48, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 16/183 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K +++GD VGKTC+L ++ + F + ++ T+ ++ TV + G+ L ++DTAGQE Sbjct: 12 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 71 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 + + Y ++ + + + SFEN+ KW+ I H +L+G + D+ D Sbjct: 72 RFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMDD 130 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 ++ + E++AR+ +++ E SA ++ F L Sbjct: 131 ------------KRVVPKGKGEQIARE-HGIRFFETSAKANINIEKAFLTLAEDILRKTP 177 Query: 182 PKK 184 K+ Sbjct: 178 VKE 180 >3CPH-A nrPDB Length = 213 Score = 186 bits (474), Expect = 3e-48, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 17/183 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 +K +++GD VGK+CLL+ + +KF ++ T+ ++ TV I G+ L L+DTAGQE Sbjct: 21 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 80 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 + + Y ++ + V +F N+K+ W + H + LLVG + D+ Sbjct: 81 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLVGNKSDMET 139 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 + +T + E LA++L + ++E SA + +F E + Sbjct: 140 -------------RVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQEKID 185 Query: 182 PKK 184 K Sbjct: 186 SNK 188 >2A5J-A nrPDB Length = 191 Score = 186 bits (474), Expect = 3e-48, Method: Composition-based stats. Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 16/168 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQE 62 K +++GD VGK+CLL+ +T +F + T+ + A V I G+ L ++DTAGQE Sbjct: 22 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQE 81 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-CPKTPFLLVGTQIDLRD 121 + + Y L+ + + +F ++ W+ + H +L+G + DL Sbjct: 82 SFRSITRSYYRGAAGALLVYDITRRETFNHL-TSWLEDARQHSSSNMVIMLIGNKSDLE- 139 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 ++ + E E AR+ + ++E SA T ++ F Sbjct: 140 -----------SRRDVKREEGEAFARE-HGLIFMETSAKTACNVEEAF 175 >5FBL-B nrPDB Length = 221 Score = 186 bits (474), Expect = 4e-48, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 16/183 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT-VMIGGEPYTLGLFDTAGQE 62 K V++GD VGK+ LL +T N+F E T+ +A + + G+ ++DTAGQE Sbjct: 17 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 76 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-KTPFLLVGTQIDLRD 121 Y + Y L+ + + ++ENV E+W+ E+ H +LVG + DLR Sbjct: 77 RYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR- 134 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 + + + A A + ++E SAL ++ F + Sbjct: 135 -----------HLRAVPTDEARAFAEK-NGLSFIETSALDSTNVEAAFQTILTEIYRIVS 182 Query: 182 PKK 184 K+ Sbjct: 183 QKQ 185 >2WWX-A nrPDB Length = 175 Score = 186 bits (472), Expect = 6e-48, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 16/181 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K +++GD VGK+CLL+ + + + Y+ T+ ++ T+ + G+ L ++DTAGQE Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 + + Y +V + V SF NVK+ W+ EI + LLVG + DL Sbjct: 69 RFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGIKCDLTT 127 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 +K + TA++ A L + ++E SA ++ F + Sbjct: 128 ------------KKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMAAEIKKRMG 174 Query: 182 P 182 P Sbjct: 175 P 175 >6IF2-B nrPDB Length = 186 Score = 186 bits (472), Expect = 7e-48, Method: Composition-based stats. Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 18/186 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K +++GD VGK+ LL+ + N F Y+ T+ ++ TV I GE L ++DTAG E Sbjct: 15 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGLE 74 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDD 122 + + Y T +V + V S SF NVK +W+ EI +C +LVG + D Sbjct: 75 RFRTITSTYYRGTHGVIVVYDVTSAESFVNVK-RWLHEINQNCDDVCRILVGNKND---- 129 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFD---EAILAALEP 179 ++K + E A K A + ++ E SA ++ +F+ E +L A + Sbjct: 130 --------DPERKVVETEDAYKFAGQMG-IQLFETSAKENVNVEEMFNCITELVLRAKKD 180 Query: 180 PEPKKS 185 K+ Sbjct: 181 NLAKQQ 186 >6O62-A nrPDB Length = 184 Score = 185 bits (471), Expect = 9e-48, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 16/178 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 +K ++VGD VGK+CLL+ + +KF ++ T+ ++ T+ G+ L ++DTAGQE Sbjct: 15 MKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQE 74 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 + + Y ++ + V SFENV E W +T H LVG + D Sbjct: 75 RFRTITTAYYRGAMGIVLIYDVTDSRSFENV-ENWFQTVTQHANEDAQIFLVGNKCDDEV 133 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 + + ++ E ++LA L V ++E SA + + + ++F E E Sbjct: 134 N------------RQVSKEQGQELAAKLN-VPFLEASAKSNENVDSIFYELASIIQEK 178 >5LPN-A nrPDB Length = 177 Score = 185 bits (470), Expect = 9e-48, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 16/178 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K +++GD VGKTC+L ++ + F + ++ T+ ++ TV + G+ L ++DTAGQE Sbjct: 12 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 71 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 + + Y ++ + + + SFEN+ KW+ I H +L+G + D+ D Sbjct: 72 RFHTITTSYYRGAMGIMLVYDITNGKSFENIS-KWLRNIDEHANEDVERMLLGNKCDMDD 130 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 ++ + E++AR+ +++ E SA ++ F L Sbjct: 131 ------------KRVVPKGKGEQIARE-HGIRFFETSAKANINIEKAFLTLAEDILRK 175 >2OCB-A nrPDB Length = 180 Score = 185 bits (469), Expect = 1e-47, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 20/184 (10%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 +K +++GDG VGK+ L+ Y TNKF S+ T+ + + + G TL ++DTAGQE Sbjct: 8 LKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQE 67 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-----KTPFLLVGTQI 117 + LR Y D L+ FSV SFEN+ W E ++ PF+++G ++ Sbjct: 68 RFKSLRTPFYRGADCCLLTFSVDDRQSFENLG-NWQKEFIYYADVKDPEHFPFVVLGNKV 126 Query: 118 DLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 D D + +T E A+ + Y+E SA + F+EA+ L Sbjct: 127 DKED-------------RQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVL 173 Query: 178 EPPE 181 E Sbjct: 174 AVEE 177 >3CPJ-B nrPDB Length = 223 Score = 184 bits (468), Expect = 2e-47, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 16/183 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K V++GD VGK+ LL +T N+F + T+ +A T+ I G+ ++DTAGQE Sbjct: 14 FKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTAGQE 73 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL-LVGTQIDLRD 121 Y + Y L+ + + SS+EN W+ E+ + + L+G + DL Sbjct: 74 RYRAITSAYYRGAVGALIVYDISKSSSYENCNH-WLSELRENADDNVAVGLIGNKSDL-- 130 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 + + E ++ A++ + + E SAL + + F+E I + Sbjct: 131 ----------AHLRAVPTEESKTFAQE-NQLLFTETSALNSENVDKAFEELINTIYQKVS 179 Query: 182 PKK 184 + Sbjct: 180 KHQ 182 >1X3S-A nrPDB Length = 195 Score = 184 bits (468), Expect = 2e-47, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 88/183 (48%), Gaps = 18/183 (9%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTA 59 + T+K +++G+ VGK+ LL+ +T + F E T+ ++ T+ + G L ++DTA Sbjct: 13 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTA 72 Query: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPF--LLVGTQI 117 GQE + L P Y ++ + V +F + + W+ E+ +C + +LVG +I Sbjct: 73 GQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKI 131 Query: 118 DLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 D + + + K AR ++ ++E SA T G++ F+E + + Sbjct: 132 DKEN-------------REVDRNEGLKFARK-HSMLFIEASAKTCDGVQCAFEELVEKII 177 Query: 178 EPP 180 + P Sbjct: 178 QTP 180 >2OCY-C nrPDB Length = 170 Score = 184 bits (467), Expect = 2e-47, Method: Composition-based stats. Identities = 46/182 (25%), Positives = 84/182 (46%), Gaps = 17/182 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 +K +++GD VGK+CLL+ + +KF ++ T+ ++ TV I G+ L L+DTAGQE Sbjct: 4 MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQE 63 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 + + Y ++ + V +F N+K+ W + H + LLVG + D+ Sbjct: 64 RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHANDEAQLLLVGNKSDMET 122 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 + +T + E LA++L + ++E SA + +F E + Sbjct: 123 -------------RVVTADQGEALAKELG-IPFIESSAKNDDNVNEIFFTLAKLIQEKID 168 Query: 182 PK 183 Sbjct: 169 SN 170 >2F9L-A nrPDB Length = 199 Score = 183 bits (465), Expect = 4e-47, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 16/183 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT-VMIGGEPYTLGLFDTAGQE 62 K V++GD VGK+ LL +T N+F E T+ +A + + G+ ++DTAGQE Sbjct: 6 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 65 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-KTPFLLVGTQIDLRD 121 Y R+ Y L+ + + ++ENV E+W+ E+ H +LVG + DLR Sbjct: 66 RYRRITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR- 123 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 + + + A A + + ++E SAL ++ F + Sbjct: 124 -----------HLRAVPTDEARAFA-EKNNLSFIETSALDSTNVEEAFKNILTEIYRIVS 171 Query: 182 PKK 184 K+ Sbjct: 172 QKQ 174 >4RKE-A nrPDB Length = 176 Score = 183 bits (465), Expect = 4e-47, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 16/180 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQE 62 K +++GD VGK+CLL+ +T +F + T+ + A + I G+ L ++DTAG E Sbjct: 11 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGLE 70 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 + + Y L+ + + +F ++ W+ + H +L+G + DL Sbjct: 71 AFRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHSNSNMVIMLIGNKSDL-- 127 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 + ++ + E E AR+ + ++E SA T ++ F E + Sbjct: 128 ----------DSRREVKKEEGEAFARE-HGLVFMETSARTAANVEEAFINTAKEIYEKIQ 176 >5LDD-C nrPDB Length = 207 Score = 182 bits (463), Expect = 7e-47, Method: Composition-based stats. Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 18/190 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQE 62 +K +++GD VGKT L+ Y KF + Y T+ ++ VM+ T+ L+DTAGQE Sbjct: 11 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTAGQE 70 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-----PKTPFLLVGTQI 117 + L Y D ++ F V + SF+ + + W E PF+++G +I Sbjct: 71 RFQSLGVAFYRGADCCVLVFDVNNAKSFDAL-DSWRDEFLIQASPRDPENFPFVVLGIKI 129 Query: 118 DLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 D+ + ++ I+ + A+ + + Y E SA ++ F AL Sbjct: 130 DVEE-----------SKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNAL 178 Query: 178 EPPEPKKSRR 187 E ++ Sbjct: 179 MQEESEEFSG 188 >2GF9-A nrPDB Length = 189 Score = 182 bits (463), Expect = 7e-47, Method: Composition-based stats. Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 16/179 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K +++G+ +VGKT L Y + F +V TV ++ TV + L ++DTAGQE Sbjct: 23 FKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQE 82 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 Y + Y FL+ + + + SF V++ W +I + +LVG + DL D Sbjct: 83 RYRTITTAYYRGAMGFLLMYDIANQESFAAVQD-WATQIKTYSWDNAQVILVGNKCDLED 141 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP 180 ++ + E +LA DL ++ E SA +K VF+ + E Sbjct: 142 ------------ERVVPAEDGRRLADDLG-FEFFEASAKENINVKQVFERLVDVICEKM 187 >2REX-B nrPDB Length = 197 Score = 182 bits (462), Expect = 8e-47, Method: Composition-based stats. Identities = 69/179 (38%), Positives = 101/179 (56%), Gaps = 1/179 (0%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K V+VGD GKT +L + +P YVPTVF+NY + + L L+DT+G Y Sbjct: 12 KLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVELSLWDTSGSPYY 71 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPS 124 D +RPL Y +D L+CF + P + ++ +KW EI +CP T LL+G + DLR D S Sbjct: 72 DNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLIGCKTDLRTDLS 131 Query: 125 TIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQK-GLKNVFDEAILAALEPPEP 182 T+ +L+ KQ PI+ E +A+ L A Y+E SA T + + ++F A + L P P Sbjct: 132 TLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTASMLCLNKPSP 190 >2O52-A nrPDB Length = 200 Score = 181 bits (461), Expect = 1e-46, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 14/182 (7%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM-IGGEPYTLGLFDTAGQE 62 K +V+G GK+CLL + NKF + T+ + V+ +GG+ L ++DTAGQE Sbjct: 26 FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQE 85 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDD 122 + + Y L+ + + S ++ ++ T P +L G + DL Sbjct: 86 RFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDL--- 142 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEP 182 + ++ +T A + A++ + ++E SALT + ++ F + L + Sbjct: 143 ---------DPEREVTFLEASRFAQE-NELMFLETSALTGENVEEAFLKCARTILNKIDS 192 Query: 183 KK 184 + Sbjct: 193 GE 194 >1ZBD-A nrPDB Length = 203 Score = 181 bits (461), Expect = 1e-46, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 78/180 (43%), Gaps = 16/180 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K +++G+ +VGKT L Y + F +V TV ++ T+ + L ++DTAG E Sbjct: 9 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGLE 68 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 Y + Y F++ + + + SF V++ W +I + LLVG + D+ D Sbjct: 69 RYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQVLLVGNKCDMED 127 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 ++ ++ E +LA L ++ E SA +K F+ + E Sbjct: 128 ------------ERVVSSERGRQLADHLG-FEFFEASAKDNINVKQTFERLVDVICEKMS 174 >5LEF-A nrPDB Length = 191 Score = 181 bits (460), Expect = 2e-46, Method: Composition-based stats. Identities = 48/188 (25%), Positives = 90/188 (47%), Gaps = 17/188 (9%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTA 59 ++ K V +G+ +VGKT L+ + + F + Y T+ ++ + T+ + L L+DTA Sbjct: 7 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTA 66 Query: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT-HHCPKTPFLLVGTQID 118 G E + L P + V +V + + + +SF+ KW+ ++ +LVG + D Sbjct: 67 GLERFRSLIPSYIRDSTVAVVVYDITNVNSFQQ-TTKWIDDVRTERGSDVIIMLVGNKTD 125 Query: 119 LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 L D ++ ++ E E+ A++L V ++E SA +K +F + AAL Sbjct: 126 LAD------------KRQVSIEEGERKAKELN-VMFIETSAKAGYNVKQLFRR-VAAALP 171 Query: 179 PPEPKKSR 186 E + R Sbjct: 172 GMESTQDR 179 >5XR6-A nrPDB Length = 194 Score = 181 bits (460), Expect = 2e-46, Method: Composition-based stats. Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 17/184 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K V++GD VGK+ LL +T N+F E T+ +A T + G+ ++DTAGQE Sbjct: 26 FKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQE 85 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 Y + Y L+ + V ++FEN +W+ E+ H P +L+G + DLR Sbjct: 86 RYRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHTDPNIVVMLIGNKCDLR- 143 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 + E A+ A +++ ++E SAL ++N F E +L + Sbjct: 144 -----------HLVAVKTEEAKAFAER-ESLYFMETSALDATNVENAFTE-VLTQIHKIV 190 Query: 182 PKKS 185 K+S Sbjct: 191 SKRS 194 >4RKF-A nrPDB Length = 190 Score = 181 bits (459), Expect = 2e-46, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 16/172 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K +++G+ +VGKT L Y + F S +V TV ++ TV + L ++DTAG E Sbjct: 24 FKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGLE 83 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 Y + Y F++ + V + SF +V++ WV +I + +LVG + D+ D Sbjct: 84 RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQD-WVTQIKTYSWDNAQVILVGNKCDMED 142 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173 Q+ I+ E +LA L V++ E SA +K VF+ + Sbjct: 143 ------------QRVISFERGRQLADQLG-VEFFETSAKENVNVKAVFERLV 181 >2HEI-A nrPDB Length = 179 Score = 180 bits (458), Expect = 2e-46, Method: Composition-based stats. Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 17/183 (9%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT-VMIGGEPYTLGLFDTAGQ 61 K V++G+ AVGK+ L++ + +F T+ + V + ++DTAGQ Sbjct: 8 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQ 67 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLR 120 E Y L P+ Y +V + + + +F K WV E+ P L G + DL Sbjct: 68 ERYHSLAPMYYRGAQAAIVVYDITNQETFARAKT-WVKELQRQASPSIVIALAGNKADLA 126 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP 180 + ++ + E A+ A D ++ ++E SA T + ++F AI L Sbjct: 127 N------------KRMVEYEEAQAYADD-NSLLFMETSAKTAMNVNDLF-LAIAKKLPKS 172 Query: 181 EPK 183 EP+ Sbjct: 173 EPQ 175 >5HZH-A nrPDB Length = 332 Score = 180 bits (458), Expect = 3e-46, Method: Composition-based stats. Identities = 94/144 (65%), Positives = 112/144 (77%) Query: 37 FDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEK 96 D A + GG+P LGL+DTAG EDYDRLRPLSYPQTDVFL+CFS+VSP+SFENV+ K Sbjct: 189 IDEAAKELGSGGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAK 248 Query: 97 WVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVE 156 W PE+ HHCP TP +LVGT++DLRDD TIEKL + K PIT +A+++ AVKY+E Sbjct: 249 WYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLE 308 Query: 157 CSALTQKGLKNVFDEAILAALEPP 180 CSALTQ+GLK VFDEAI A L PP Sbjct: 309 CSALTQRGLKTVFDEAIRAVLCPP 332 Score = 79.5 bits (195), Expect = 7e-16, Method: Composition-based stats. Identities = 39/49 (79%), Positives = 42/49 (85%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGE 49 MQ IKCVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G Sbjct: 4 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGS 52 >4UJ4-A nrPDB Length = 185 Score = 180 bits (458), Expect = 3e-46, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 16/183 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT-VMIGGEPYTLGLFDTAGQE 62 K V++GD VGK+ LL +T N+F E T+ +A + + G+ ++DTAG E Sbjct: 11 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGLE 70 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-KTPFLLVGTQIDLRD 121 Y + Y L+ + + ++ENV E+W+ E+ H +LVG + DLR Sbjct: 71 RYRAITSAYYRGAVGALLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLR- 128 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 + + + A A + ++E SAL ++ F + Sbjct: 129 -----------HLRAVPTDEARAFAEK-NGLSFIETSALDSTNVEAAFQTILTEIYRIVS 176 Query: 182 PKK 184 K+ Sbjct: 177 QKQ 179 >5UB8-A nrPDB Length = 222 Score = 180 bits (456), Expect = 4e-46, Method: Composition-based stats. Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 24/192 (12%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K V++GD VGK+ LL +T ++F E T+ +A T+ I G+ ++DTAGQE Sbjct: 16 YKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAGQE 75 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL-LVGTQIDLRD 121 Y + Y L+ + + S+E+V +W+ E+ H + LVG + DL Sbjct: 76 RYRAITSAYYRGAVGALIVYDIAKTESYESVS-RWLKELKEHADANIIIELVGNKSDL-- 132 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGL--------KNVFDEAI 173 + + + E A+ A + + + E SAL+ + KN+++ Sbjct: 133 ----------DHLRAVPTEEAKNFAME-NNLLFTEASALSSDNVDLSFHQLLKNIYEMIS 181 Query: 174 LAALEPPEPKKS 185 LE + K++ Sbjct: 182 KHQLENNDSKQT 193 >3RAB-A nrPDB Length = 169 Score = 180 bits (456), Expect = 4e-46, Method: Composition-based stats. Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 16/178 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K +++G+ +VGKT L Y + F +V TV ++ T+ + L ++DTAGQE Sbjct: 6 FKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQE 65 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 Y + Y F++ + + + SF V++ W +I + LLVG + D+ D Sbjct: 66 RYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQVLLVGNKCDMED 124 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 ++ ++ E +LA L ++ E SA +K F+ + E Sbjct: 125 ------------ERVVSSERGRQLADHLG-FEFFEASAKDNINVKQTFERLVDVICEK 169 >3REG-A nrPDB Length = 194 Score = 179 bits (454), Expect = 8e-46, Method: Composition-based stats. Identities = 78/183 (42%), Positives = 116/183 (63%), Gaps = 11/183 (6%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + +K VVVGDGAVGKTCLL++++ + P+ YVPTVF+N++ + E + L L+DTAGQ Sbjct: 22 KALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSHVMKYKNEEFILHLWDTAGQ 81 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 E+YDRLRPLSY +DV L+CF+V + +SF+N+ KW PEI H+ +LVG ++DLR Sbjct: 82 EEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYIDTAKTVLVGLKVDLRK 141 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL-EPP 180 D S +T + + L + L V Y+E S++ + GL VF++++ P Sbjct: 142 DGSD----------DVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCIFSNKP 191 Query: 181 EPK 183 PK Sbjct: 192 VPK 194 >4PHF-A nrPDB Length = 184 Score = 178 bits (453), Expect = 1e-45, Method: Composition-based stats. Identities = 51/186 (27%), Positives = 92/186 (49%), Gaps = 19/186 (10%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPY-TLGLFDTAGQ 61 +K +++GD VGKT L+ Y +K+ +Y T+ ++ V + G+ T+ ++DTAGQ Sbjct: 11 LKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQ 70 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-----PKTPFLLVGTQ 116 E + L Y D ++ + V + SSFEN+K W E H PF+++G + Sbjct: 71 ERFQSLGVAFYRGADCCVLVYDVTNASSFENIKS-WRDEFLVHANVNSPETFPFVILGNK 129 Query: 117 IDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 ID A+ +K ++ ++A++LA+ L + SA + F+E +A Sbjct: 130 ID-----------AEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSA 178 Query: 177 LEPPEP 182 L+ + Sbjct: 179 LQQNQA 184 >4G01-B nrPDB Length = 181 Score = 178 bits (453), Expect = 1e-45, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 17/183 (9%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFD-NYAVTVMIGGEPYTLGLFDTAGQED 63 K V++GD GK+ L++ + ++F T+ ++ T+ + ++DTAGQE Sbjct: 14 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 73 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRDD 122 Y L P+ Y ++ F V + +SFE K KWV E+ P L G + DL D Sbjct: 74 YHSLAPMYYRGAAAAIIVFDVTNQASFERAK-KWVQELQAQGNPNMVMALAGNKSDLLD- 131 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEP 182 + +T E A+ A++ + ++E SA T +K +F E L +P Sbjct: 132 -----------ARKVTAEDAQTYAQE-NGLFFMETSAKTATNVKEIFYEIARR-LPRVQP 178 Query: 183 KKS 185 ++ Sbjct: 179 TEN 181 >2FG5-A nrPDB Length = 192 Score = 178 bits (452), Expect = 1e-45, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 17/187 (9%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTA 59 ++ +K ++GD VGK+ ++ + + F PT+ ++ TV G E + ++DTA Sbjct: 21 IRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTA 80 Query: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL-LVGTQID 118 GQE + L P+ Y + ++ + + SF +K KWV E+ H P+ + + G + D Sbjct: 81 GQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLK-KWVKELKEHGPENIVMAIAGNKCD 139 Query: 119 LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 L D + + + A++ A + A+ VE SA ++ +F + Sbjct: 140 LSDI------------REVPLKDAKEYAESIGAIV-VETSAKNAINIEELFQGISR-QIP 185 Query: 179 PPEPKKS 185 P +P ++ Sbjct: 186 PLDPHEN 192 >2IL1-A nrPDB Length = 192 Score = 178 bits (451), Expect = 1e-45, Method: Composition-based stats. Identities = 41/179 (22%), Positives = 82/179 (45%), Gaps = 15/179 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 ++ +++G VGKT L+ +T + F TV ++ TV + G+ L ++DTAGQE Sbjct: 27 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 86 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 ++ + Y ++ + + +F+++ KW+ I + LLVG ++D Sbjct: 87 RFNSITSAYYRSAKGIILVYDITKKETFDDLP-KWMKMIDKYASEDAELLLVGNKLDCET 145 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP 180 D + IT + EK A+ + +++ E SA + +F + + L+ Sbjct: 146 D------------REITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKM 192 >1TU4-A nrPDB Length = 171 Score = 178 bits (451), Expect = 1e-45, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 17/180 (9%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQ 61 K V++G+ AVGK+ L++ + +F T+ + TV + ++DTAGQ Sbjct: 7 QFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQ 66 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLR 120 E Y L P+ Y +V + + + SF K WV E+ P L G + DL Sbjct: 67 ERYHSLAPMYYRGAQAAIVVYDITNEESFARAK-NWVKELQRQASPNIVIALSGNKADLA 125 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP 180 + ++ + + A+ A D ++ ++E SA T + +F AI L Sbjct: 126 N------------KRAVDFQEAQSYADD-NSLLFMETSAKTSMNVNEIF-MAIAKKLPKN 171 >2BMD-A nrPDB Length = 186 Score = 178 bits (451), Expect = 1e-45, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 16/183 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM-IGGEPYTLGLFDTAGQE 62 K +V+G+ GK+CLL + KF + T+ + ++ +GG+ L ++DTAGQE Sbjct: 11 FKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQE 70 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-KTPFLLVGTQIDLRD 121 + + Y L+ + + S ++ N W+ + +L G + DL Sbjct: 71 RFRSVTRSYYRGAAGALLVYDITSRETY-NALTNWLTDARMLASQNIVIILCGNKKDLDA 129 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 D + +T A + A++ + ++E SALT + ++ F + L E Sbjct: 130 D------------REVTFLEASRFAQE-NELMFLETSALTGENVEEAFVQCARKILNKIE 176 Query: 182 PKK 184 + Sbjct: 177 SGE 179 >3DZ8-A nrPDB Length = 191 Score = 178 bits (451), Expect = 2e-45, Method: Composition-based stats. Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 16/175 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K +++G+ +VGKT L Y + F +V TV ++ TV + L ++DTAGQE Sbjct: 24 FKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQE 83 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRD 121 Y + Y F++ + + + SF V++ W +I + +LVG + D+ + Sbjct: 84 RYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WATQIKTYSWDNAQVILVGNKCDMEE 142 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 ++ + E + LA L + E SA ++ F+ + A Sbjct: 143 ------------ERVVPTEKGQLLAEQLG-FDFFEASAKENISVRQAFERLVDAI 184 >2G6B-A nrPDB Length = 180 Score = 177 bits (450), Expect = 2e-45, Method: Composition-based stats. Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 17/176 (9%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKF-PSEYVPTVFDNYAVTVM-IGGEPYTLGLFDTAG 60 K ++VGD VGKTCLL+ + F ++ TV ++ V+ + G L ++DTAG Sbjct: 10 AFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAG 69 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-KTPFLLVGTQIDL 119 QE + + Y L+ + V + +SF+N++ W+ EI + +L+G ++D Sbjct: 70 QERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQA-WLTEIHEYAQHDVALMLLGNKVD- 127 Query: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 ++ + E EKLA++ + ++E SA T + F Sbjct: 128 -----------SAHERVVKREDGEKLAKEYG-LPFMETSAKTGLNVDLAFTAIAKE 171 >2EW1-A nrPDB Length = 201 Score = 177 bits (449), Expect = 3e-45, Method: Composition-based stats. Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 16/168 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K V++G+ VGKTCL+ +T FP T+ ++ TV I GE L ++DTAGQE Sbjct: 27 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 86 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPF-LLVGTQIDLRD 121 + + Y + ++ + + SF + E W+ EI + +LVG +IDL + Sbjct: 87 RFRSITQSYYRSANALILTYDITCEESFRCLPE-WLREIEQYASNKVITVLVGNKIDLAE 145 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 ++ ++ + AE+ + + + + Y+E SA ++ +F Sbjct: 146 ------------RREVSQQRAEEFS-EAQDMYYLETSAKESDNVEKLF 180 >1EK0-A nrPDB Length = 170 Score = 177 bits (449), Expect = 3e-45, Method: Composition-based stats. Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 13/171 (7%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT-VMIGGEPYTLGLFDTA 59 + +IK V++G+ AVGK+ +++ + +N F PT+ + V I ++DTA Sbjct: 1 VTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTA 60 Query: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL-LVGTQID 118 GQE + L P+ Y LV + V P SF + WV E+ K + LVG +ID Sbjct: 61 GQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARH-WVKELHEQASKDIIIALVGNKID 119 Query: 119 LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 + L + ++ + E EKLA + K + + E SA T + + +VF Sbjct: 120 M---------LQEGGERKVAREEGEKLAEE-KGLLFFETSAKTGENVNDVF 160 >2HUP-A nrPDB Length = 201 Score = 176 bits (447), Expect = 5e-45, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 15/177 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K V+VGD +VGKTC++ + T F T+ ++ T+ I G+ L ++DTAGQE Sbjct: 30 FKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQE 89 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPF-LLVGTQIDLRD 121 + + Y + ++ + + SSF +V W+ ++ + LL+G + DL + Sbjct: 90 RFRTITQSYYRSANGAILAYDITKRSSFLSVPH-WIEDVRKYAGSNIVQLLIGNKSDLSE 148 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 + ++ A+ LA + +E SA ++ F + Sbjct: 149 ------------LREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIM 193 >2FFQ-A nrPDB Length = 171 Score = 176 bits (446), Expect = 7e-45, Method: Composition-based stats. Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 16/177 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQE 62 K V +G+ +VGKT L+ + + F + Y T+ ++ + T+ + L L+DTAGQE Sbjct: 3 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 62 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT-HHCPKTPFLLVGTQIDLRD 121 + L P + V +V + + + +SF+ KW+ ++ +LVG + DL D Sbjct: 63 RFRSLIPSYIRDSTVAVVVYDITNLNSFQQTS-KWIDDVRTERGSDVIIMLVGNKTDLAD 121 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 ++ IT E E+ A++L +V ++E SA T +K +F A LE Sbjct: 122 ------------KRQITIEEGEQRAKEL-SVMFIETSAKTGYNVKQLFRRVASALLE 165 >3RWM-B nrPDB Length = 185 Score = 175 bits (445), Expect = 9e-45, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 16/177 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K V++GD VGK+ LL +TT++F E T+ +A T+ + + ++DTAG E Sbjct: 11 FKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGLE 70 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL-LVGTQIDLRD 121 Y + Y L+ + + SS+EN W+ E+ + + L+G + DL Sbjct: 71 RYRAITSAYYRGAVGALIVYDISKSSSYENCNH-WLTELRENADDNVAVGLIGNKSDL-- 127 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 + + + A+ A + + + E SAL + F E I+A + Sbjct: 128 ----------AHLRAVPTDEAKNFAME-NQMLFTETSALNSDNVDKAFRELIVAIFQ 173 >5CM8-B nrPDB Length = 203 Score = 173 bits (440), Expect = 3e-44, Method: Composition-based stats. Identities = 53/173 (30%), Positives = 85/173 (49%), Gaps = 14/173 (8%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K ++VG G VGK+ L + + ++F +Y PT D+Y V++ GE + + DTAGQEDY Sbjct: 15 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGQEDY 74 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT-HHCPKTPFLLVGTQIDLRDDP 123 +R + + FL FS+ SF+ +E + + PFLLVG + DL D Sbjct: 75 AAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDLND-- 132 Query: 124 STIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 ++ + + A+ AV YVE SA T++ + VF + + Sbjct: 133 ----------KRKVPLSECQLRAQQW-AVPYVETSAKTRENVDKVFFDLMREI 174 >2ERX-A nrPDB Length = 172 Score = 173 bits (438), Expect = 5e-44, Method: Composition-based stats. Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 15/172 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63 + V G G VGK+ L++ + F Y+PTV D Y + TL + DT G Sbjct: 4 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQ 63 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVK--EKWVPEITHHCPKTPFLLVGTQIDLRD 121 + ++ LS + F++ +S+ S S E +K + + EI P +LVG + D Sbjct: 64 FPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCD--- 120 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173 ++ + + AE LAR K ++E SA +K +F E + Sbjct: 121 ---------ESPSREVQSSEAEALARTWK-CAFMETSAKLNHNVKELFQELL 162 >4KYI-B nrPDB Length = 170 Score = 172 bits (437), Expect = 7e-44, Method: Composition-based stats. Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 17/177 (9%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQ 61 K V++G+ AVGK+ L++ + +F T+ + TV + ++DTAG Sbjct: 9 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGL 68 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLR 120 E Y L P+ Y +V + + + +F K WV E+ P L G + DL Sbjct: 69 ERYHSLAPMYYRGAQAAIVVYDITNTDTFARAK-NWVKELQRQASPNIVIALAGNKADL- 126 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 ++ + + A+ A D ++ ++E SA T + +F AI L Sbjct: 127 -----------ASKRAVEFQEAQAYADD-NSLLFMETSAKTAMNVNEIF-MAIAKKL 170 >6IYB-A nrPDB Length = 199 Score = 172 bits (437), Expect = 8e-44, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 21/184 (11%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQE 62 +K +++GD VGKT L+ Y KF ++Y T+ ++ VM+ T+ ++DTAG E Sbjct: 14 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGLE 73 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-----PKTPFLLVGTQI 117 + Y D ++ F V +P++F+ + + W E PF+++G +I Sbjct: 74 RFQSGV-AFYRGADCCVLVFDVTAPNTFKTL-DSWRDEFLIQASPRDPENFPFVVLGNKI 131 Query: 118 DLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 DL + + + + A+ + Y E SA ++ F AL Sbjct: 132 DLEN-------------RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 178 Query: 178 EPPE 181 + Sbjct: 179 KQET 182 >5YOZ-A nrPDB Length = 177 Score = 171 bits (435), Expect = 1e-43, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 15/170 (8%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAG 60 + K V++G+ GK+ + + +T N+F + T+ + + TVMI G ++DTAG Sbjct: 14 TSAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKYEIWDTAG 73 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDL 119 E + L P+ Y LV + + + S + + W+ E+ + P +LVG + DL Sbjct: 74 LERFRSLAPIYYRGASGALVVYDITNSESLKKAQT-WIKELRANADPSLIIVLVGNKKDL 132 Query: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 + ++ E ++LA + + + E SA ++ VF Sbjct: 133 ------------GSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVF 170 >2G77-B nrPDB Length = 198 Score = 171 bits (435), Expect = 1e-43, Method: Composition-based stats. Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 21/175 (12%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAG 60 + K +V+GD VGKTCL + +FP T+ ++ V I GE + L+DTAG Sbjct: 28 RIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAG 87 Query: 61 QEDYD-RLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH--CPKTPFLLVGTQI 117 QE + + Y + + + + +SF ++ W+ E H P +LVG + Sbjct: 88 QERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPA-WIEECKQHLLANDIPRILVGNKC 146 Query: 118 DLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSAL---TQKGLKNVF 169 DLR + + A+K A D ++ E SA ++ +F Sbjct: 147 DLRSAI------------QVPTDLAQKFA-DTHSMPLFETSAKNPNDNDHVEAIF 188 >2GIL-A nrPDB Length = 162 Score = 171 bits (435), Expect = 1e-43, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 16/174 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQE 62 K V +G+ +VGKT L+ + + F + Y T+ ++ + T+ + L L+DTAGQE Sbjct: 2 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 61 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT-HHCPKTPFLLVGTQIDLRD 121 + L P + V +V + + + +SF+ KW+ ++ +LVG + DL D Sbjct: 62 RFRSLIPSYIRDSTVAVVVYDITNVNSFQQ-TTKWIDDVRTERGSDVIIMLVGNKTDLAD 120 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 ++ ++ E E+ A++L V ++E SA +K +F A Sbjct: 121 ------------KRQVSIEEGERKAKELN-VMFIETSAKAGYNVKQLFRRVAAA 161 >2F7S-A nrPDB Length = 217 Score = 171 bits (434), Expect = 2e-43, Method: Composition-based stats. Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 27/191 (14%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGE----------PYT 52 IK + +GD VGKT L YT NKF +++ TV ++ V+ + Sbjct: 26 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVH 85 Query: 53 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT--HHCPKTPF 110 L L+DTAGQE + L + FL+ F + S SF NV+ W+ ++ +C Sbjct: 86 LQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPDI 144 Query: 111 LLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFD 170 +L+G + DL D Q+ + A +LA + Y E SA T + ++ + Sbjct: 145 VLIGNKADLPD------------QREVNERQARELADKYG-IPYFETSAATGQNVEKAVE 191 Query: 171 EAILAALEPPE 181 + ++ E Sbjct: 192 TLLDLIMKRME 202 >3BFK-A nrPDB Length = 181 Score = 171 bits (434), Expect = 2e-43, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 17/187 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT--VMIGGEPYTLGLFDTAGQ 61 K V++GD VGK+ LL +T ++F E T+ +A + + ++DTAGQ Sbjct: 8 FKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAGQ 67 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-KTPFLLVGTQIDLR 120 E Y + Y L+ + + +SFEN+ EKW+ E+ + LLVG + DL+ Sbjct: 68 ERYRAITSAYYRGAVGALLVYDITKKNSFENI-EKWLKELRDNADSNIVILLVGNKSDLK 126 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP 180 + I A + A+ K + ++E SAL ++ F + + Sbjct: 127 ------------HLRVINDNDATQYAKKEK-LAFIETSALEATNVELAFHQLLNEIYNVR 173 Query: 181 EPKKSRR 187 + K++ + Sbjct: 174 QKKQATK 180 >1YVD-A nrPDB Length = 169 Score = 171 bits (433), Expect = 2e-43, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 16/178 (8%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTA 59 ++ +K ++GD VGK+ ++ + + F PT+ ++ TV E + ++DTA Sbjct: 3 LRELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTA 62 Query: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL-LVGTQID 118 GQE + L P+ Y + ++ + + +F +K WV E+ H P + + + G + D Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLK-NWVRELRQHGPPSIVVAIAGNKCD 121 Query: 119 LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 L D + + A+ A + A+ +VE SA + +F E Sbjct: 122 LTDV------------REVMERDAKDYADSIHAI-FVETSAKNAININELFIEISRRI 166 >3TSO-A nrPDB Length = 178 Score = 170 bits (432), Expect = 2e-43, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 16/182 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 K V++G+ VGKT LL +T N+F + T+ ++ TVM+G ++DTAG E Sbjct: 11 FKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLE 70 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-KTPFLLVGTQIDLRD 121 Y + Y L+ F + ++ V E+W+ E+ H +LVG + DL Sbjct: 71 RYRAITSAYYRGAVGALLVFDLTKHQTY-AVVERWLKELYDHAEATIVVMLVGNKSDLS- 128 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 + + + E A A + + ++E SAL ++ F+ + Sbjct: 129 -----------QAREVPTEEARMFA-ENNGLLFLETSALDSTNVELAFETVLKEIFAKVS 176 Query: 182 PK 183 + Sbjct: 177 KQ 178 >1Z06-A nrPDB Length = 189 Score = 170 bits (432), Expect = 2e-43, Method: Composition-based stats. Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 21/175 (12%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAG 60 + K +V+GD VGKTCL + +FP T+ ++ V I GE + L+DTAG Sbjct: 19 RIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAG 78 Query: 61 QEDYD-RLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH--CPKTPFLLVGTQI 117 QE + + Y + + + + +SF ++ W+ E H P +LVG + Sbjct: 79 QERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPA-WIEECKQHLLANDIPRILVGNKC 137 Query: 118 DLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSAL---TQKGLKNVF 169 DLR + + A+K A D ++ E SA ++ +F Sbjct: 138 DLRSAI------------QVPTDLAQKFA-DTHSMPLFETSAKNPNDNDHVEAIF 179 >6HUF-A nrPDB Length = 182 Score = 169 bits (429), Expect = 6e-43, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 17/186 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQE 62 IK + +GD VGKT +L YT KF S+++ TV ++ T+ + L L+DTAG E Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKRIKLQLWDTAGLE 69 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC--PKTPFLLVGTQIDLR 120 + L + FL+ F + + SF NV+ W+ ++ H +L G + DL Sbjct: 70 RFRSLTTAFFRDAMGFLLLFDLTNEESFLNVR-NWISQLKTHAYSENPDIVLCGNKSDLE 128 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP 180 D ++ + A +LA + Y E SA + + + ++ Sbjct: 129 D------------ERVVAAAEARQLAEHYG-IPYFETSAANGTNISQAIEMLLDLIMKRM 175 Query: 181 EPKKSR 186 E + Sbjct: 176 ERSVDK 181 >1D5C-A nrPDB Length = 162 Score = 168 bits (426), Expect = 1e-42, Method: Composition-based stats. Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 16/170 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQE 62 K V +G+ AVGKT ++ + + F + Y T+ ++ + T+ + P L L+DTAGQE Sbjct: 2 YKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGPVRLQLWDTAGQE 61 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHCPKTPFLLVGTQIDLRD 121 + L P + +V + + + SFEN KW+ +I LVG + DL D Sbjct: 62 RFRSLIPSYIRDSAAAIVVYDITNRQSFEN-TTKWIQDILNERGKDVIIALVGNKTDLGD 120 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDE 171 + +T E + A++ + + E SA +K +F + Sbjct: 121 ------------LRKVTYEEGMQKAQEYNTM-FHETSAKAGHNIKVLFKK 157 >2KE5-A nrPDB Length = 174 Score = 168 bits (426), Expect = 1e-42, Method: Composition-based stats. Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 15/183 (8%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K ++VG G VGK+ L + + ++F +Y PT D+Y V++ GE + + DTAG EDY Sbjct: 5 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 64 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKE--KWVPEITHHCPKTPFLLVGTQIDLRDD 122 +R + + FL+ FS+ SF E + + + K P L+VG + DL + Sbjct: 65 AAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEEDKIPLLVVGNKSDLEE- 123 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEP 182 ++ + E A A + V+YVE SA T+ + VF + + Sbjct: 124 -----------RRQVPVEEARSKAEEWG-VQYVETSAKTRANVDKVFFDLMREIRTKKMS 171 Query: 183 KKS 185 + Sbjct: 172 ENK 174 >1ZC4-A nrPDB Length = 175 Score = 167 bits (424), Expect = 2e-42, Method: Composition-based stats. Identities = 52/173 (30%), Positives = 81/173 (46%), Gaps = 14/173 (8%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K ++VG G VGK+ L + + ++F +Y PT D+Y V++ GE + + DTAG EDY Sbjct: 8 KVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVVLDGEEVQIDILDTAGLEDY 67 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT-HHCPKTPFLLVGTQIDLRDDP 123 +R + + FL FS+ SF + + PFLLVG + DL D Sbjct: 68 AAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILRVKEDENVPFLLVGNKSDLED-- 125 Query: 124 STIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 ++ ++ E A+ A V YVE SA T+ + VF + + Sbjct: 126 ----------KRQVSVEEAKNRAEQWN-VNYVETSAKTRANVDKVFFDLMREI 167 >3BC1-A nrPDB Length = 195 Score = 167 bits (424), Expect = 2e-42, Method: Composition-based stats. Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 27/196 (13%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMI-----------GGEPYT 52 IK + +GD VGKT +L YT KF S+++ TV ++ ++ G+ Sbjct: 12 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQRIH 71 Query: 53 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC--PKTPF 110 L L+DTAG E + L + FL+ F + + SF NV+ W+ ++ H Sbjct: 72 LQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVR-NWISQLQMHAYSENPDI 130 Query: 111 LLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFD 170 +L G + DL D Q+ + E A +LA + Y E SA + + + Sbjct: 131 VLCGNKSDLED------------QRAVKEEEARELAEKYG-IPYFETSAANGTNISHAIE 177 Query: 171 EAILAALEPPEPKKSR 186 + ++ E + Sbjct: 178 MLLDLIMKRMERSVDK 193 >2IEZ-A nrPDB Length = 220 Score = 166 bits (421), Expect = 4e-42, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 27/191 (14%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGE----------PYT 52 IK + +GD VGKT L YT NKF +++ TV ++ V+ + Sbjct: 12 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVH 71 Query: 53 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT--HHCPKTPF 110 L L+DTAG E + L + FL+ F + S SF NV+ W+ ++ +C Sbjct: 72 LQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPDI 130 Query: 111 LLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFD 170 +L+G + DL D Q+ + A +LA + Y E SA T + ++ + Sbjct: 131 VLIGNKADLPD------------QREVNERQARELAEKYG-IPYFETSAATGQNVEKSVE 177 Query: 171 EAILAALEPPE 181 + ++ E Sbjct: 178 TLLDLIMKRME 188 >3CON-A nrPDB Length = 190 Score = 166 bits (420), Expect = 6e-42, Method: Composition-based stats. Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 17/180 (9%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 M K VVVG G VGK+ L I N F EY PT+ D+Y V+I GE L + DTAG Sbjct: 19 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAG 78 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH--HCPKTPFLLVGTQID 118 QE+Y +R + FL F++ + SF ++ + +I P +LVG + D Sbjct: 79 QEEYSAMRDQYMRTGEGFLCVFAINNSKSFADI-NLYREQIKRVKDSDDVPMVLVGNKCD 137 Query: 119 LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 L + + + A +LA+ + ++E SA T++G+++ F + + Sbjct: 138 LPT-------------RTVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAFYTLVREIRQ 183 >1YZU-A nrPDB Length = 170 Score = 165 bits (419), Expect = 8e-42, Method: Composition-based stats. Identities = 51/178 (28%), Positives = 92/178 (51%), Gaps = 16/178 (8%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQ 61 + K V++G+G VGKT L++ Y NKF +++ T+ ++ + IGG+ L ++DTAGQ Sbjct: 6 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQ 65 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-CPKTPFLLVGTQIDLR 120 E + L P+ Y ++ ++ + + SF+ VK WV E+ + +VG +IDL Sbjct: 66 ERFHALGPIYYRDSNGAILVYDITDEDSFQKVK-NWVKELRKMLGNEICLCIVGNKIDLE 124 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 K++ ++ + AE A + A K+ SA KG++ +F + +E Sbjct: 125 ------------KERHVSIQEAESYAESVGA-KHYHTSAKQNKGIEELFLDLCKRMIE 169 >2IEY-A nrPDB Length = 195 Score = 165 bits (419), Expect = 9e-42, Method: Composition-based stats. Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 27/191 (14%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGE----------PYT 52 IK + +GD VGKT L YT NKF +++ TV ++ V+ + Sbjct: 12 IKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAFKVH 71 Query: 53 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT--HHCPKTPF 110 L L+DTAG E + L + FL+ F + S SF NV+ W+ ++ +C Sbjct: 72 LQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVR-NWMSQLQANAYCENPDI 130 Query: 111 LLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFD 170 +L+G + DL D Q+ + A +LA + Y E SA T + ++ + Sbjct: 131 VLIGNKADLPD------------QREVNERQARELAEKYG-IPYFETSAATGQNVEKSVE 177 Query: 171 EAILAALEPPE 181 + ++ E Sbjct: 178 TLLDLIMKRME 188 >5WDQ-A nrPDB Length = 170 Score = 165 bits (418), Expect = 1e-41, Method: Composition-based stats. Identities = 56/180 (31%), Positives = 86/180 (47%), Gaps = 17/180 (9%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 M K VVVG G VGK+ L I N F EY PT+ D+Y V+I GE L + DTAG Sbjct: 5 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAG 64 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH--HCPKTPFLLVGTQID 118 QE+Y +R + FL F++ + SFE++ ++ +I P +LVG + D Sbjct: 65 QEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDI-HQYREQIKRVKDSDDVPMVLVGNKCD 123 Query: 119 LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 + + A+ LAR + Y+E SA T++G+++ F + + Sbjct: 124 -------------AAARTVESRQAQDLARSYG-IPYIETSAKTRQGVEDAFYTLVREIRQ 169 >5UHV-A nrPDB Length = 166 Score = 165 bits (417), Expect = 1e-41, Method: Composition-based stats. Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 17/180 (9%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 M K VVVG G VGK+ L I N F EY PT+ D+Y V+I GE L + DTAG Sbjct: 1 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAG 60 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH--HCPKTPFLLVGTQID 118 QE+Y +R + FL F++ + SF ++ + +I P +LVG + D Sbjct: 61 QEEYSAMRDQYMRTGEGFLCVFAINNSKSFADI-NLYREQIKRVKDSDDVPMVLVGNKCD 119 Query: 119 LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 L + + + A +LA+ + ++E SA T++G+++ F + + Sbjct: 120 LPT-------------RTVDTKQAHELAKSYG-IPFIETSAKTRQGVEDAFYTLVREIRQ 165 >2P5S-A nrPDB Length = 199 Score = 165 bits (417), Expect = 1e-41, Method: Composition-based stats. Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 10/177 (5%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAG 60 + K V+ GD AVGK+ L+ N+F T+ ++ T+++ GE L L+DTAG Sbjct: 27 KAYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAG 86 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPK-TPFLLVGTQIDL 119 QE + + + + D L+ + V SF N++E WV I + P +LVG + D+ Sbjct: 87 QERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIRE-WVDMIEDAAHETVPIMLVGNKADI 145 Query: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 RD +T QK + EKLA A+ + E SA + Sbjct: 146 RDTAAT------EGQKCVPGHFGEKLAMTYGAL-FCETSAKDGSNIVEAVLHLAREV 195 >4WA7-A nrPDB Length = 170 Score = 164 bits (416), Expect = 2e-41, Method: Composition-based stats. Identities = 54/177 (30%), Positives = 82/177 (46%), Gaps = 15/177 (8%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 M K VVVG G VGK+ L I N F EY PT+ D+Y V+I GE L + DTAG Sbjct: 2 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAG 61 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVP-EITHHCPKTPFLLVGTQIDL 119 E+Y +R + FL F++ + SFE++ + P +LVG + DL Sbjct: 62 LEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDL 121 Query: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 + + + A+ LAR + ++E SA T++G+ + F + Sbjct: 122 P-------------SRTVDTKQAQDLARSYG-IPFIETSAKTRQGVDDAFYTLVREI 164 >2ERY-A nrPDB Length = 172 Score = 162 bits (411), Expect = 8e-41, Method: Composition-based stats. Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 14/162 (8%) Query: 16 KTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQT 75 K+ L I + + F ++Y PT+ D+Y +I L + DTAGQE++ +R Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTG 77 Query: 76 DVFLVCFSVVSPSSFENVKEKWVPEIT-HHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQ 134 + FL+ FSV SFE + + + + P +L+G + DL + Q Sbjct: 78 EGFLLVFSVTDRGSFEEIYKFQRQILRVKDRDEFPMILIGNKADL------------DHQ 125 Query: 135 KPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 + +T E ++LAR LK V Y+E SA + + F E + Sbjct: 126 RQVTQEEGQQLARQLK-VTYMEASAKIRMNVDQAFHELVRVI 166 >5WDR-A nrPDB Length = 171 Score = 161 bits (409), Expect = 1e-40, Method: Composition-based stats. Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 16/163 (9%) Query: 16 KTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQT 75 K+ L I F +EY PT+ D+Y V I E L + DTAGQEDY +R Sbjct: 20 KSALTIQLIQQHFVTEYDPTIEDSYRKHVSIDDEACLLDILDTAGQEDYSAMRDQYMRTG 79 Query: 76 DVFLVCFSVVSPSSFENVKEKWVPEITHHC--PKTPFLLVGTQIDLRDDPSTIEKLAKNK 133 + FL +S+ S S + + + +I + P +LVG + DL + Sbjct: 80 EGFLCVYSIDSQQSLDEI-HSFREQILRVKDQDEVPMILVGNKCDLEE------------ 126 Query: 134 QKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 + ++ E + +A+ ++ ++E SA + ++ F + + Sbjct: 127 HREVSTEAGQAVAKSY-SIPFMETSAKKRINVEEAFYQLVREI 168 >4KU4-A nrPDB Length = 206 Score = 161 bits (408), Expect = 2e-40, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 81/190 (42%), Gaps = 32/190 (16%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K ++G+G VGKT L ++ T + F Y PT+ D+Y +I G P L + DTAGQE+Y Sbjct: 16 KIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCVIDGIPSHLEILDTAGQEEY 75 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT--------------HHCPKTP- 109 LR Q ++F++ F V SSFE + + I H P Sbjct: 76 GALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQTKRKLDETRRHPGDRHPDDLPF 135 Query: 110 ----FLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGL 165 +LVG + DL + ++ + LA+ L +VE SA + Sbjct: 136 APSLVVLVGNKCDL------------DTRREVGTLEGSSLAKKLG-CGFVETSAKLGTNV 182 Query: 166 KNVFDEAILA 175 + F + A Sbjct: 183 EEAFFSVVRA 192 >3OES-A nrPDB Length = 201 Score = 161 bits (408), Expect = 2e-40, Method: Composition-based stats. Identities = 52/194 (26%), Positives = 91/194 (46%), Gaps = 17/194 (8%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 ++ K V++G VGKT L + +F Y PTV + Y+ V +G + + L L DTAG Sbjct: 22 VRYRKVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYSKIVTLGKDEFHLHLVDTAG 81 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-KTPFLLVGTQIDL 119 Q++Y L +++ +SV S SF+ ++ + H + P +LVG + DL Sbjct: 82 QDEYSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGHGKTRVPVVLVGNKADL 141 Query: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI--LAAL 177 ++ + +KLA A ++E SA + + +F + I +A + Sbjct: 142 S------------PEREVQAVEGKKLAESWGA-TFMESSARENQLTQGIFTKVIQEIARV 188 Query: 178 EPPEPKKSRRCVLL 191 E ++ RRC L+ Sbjct: 189 ENSYGQE-RRCHLM 201 >1Z22-A nrPDB Length = 168 Score = 161 bits (407), Expect = 2e-40, Method: Composition-based stats. Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 15/178 (8%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQ 61 IK VVVG+GAVGK+ ++ Y F +Y T+ ++ + + E L L+DTAGQ Sbjct: 5 AIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQ 64 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 E++D + Y ++ FS SFE + W ++ P LV +IDL D Sbjct: 65 EEFDAITKAYYRGAQACVLVFSTTDRESFEAISS-WREKVVAEVGDIPTALVQNKIDLLD 123 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 D I E AE LA+ LK +++ S + VF L+ Sbjct: 124 DSC------------IKNEEAEGLAKRLK-LRFYRTSVKEDLNVSEVFKYLAEKHLQK 168 >3CBQ-A nrPDB Length = 195 Score = 160 bits (406), Expect = 3e-40, Method: Composition-based stats. Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 16/176 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 62 K ++VG+ VGK+ L ++ + S + P D Y +M+ E TL ++D Q Sbjct: 24 FKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEEVTLVVYDIWEQG 83 Query: 63 DYDR-LRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLR 120 D LR D FL+ FSV SF V E + P +LVG + DL Sbjct: 84 DAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGNKSDL- 142 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 + + ++ E LA L + K++E SA + +F+ A+ Sbjct: 143 -----------ARSREVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVRQI 186 >2FN4-A nrPDB Length = 181 Score = 159 bits (402), Expect = 8e-40, Method: Composition-based stats. Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 14/162 (8%) Query: 16 KTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQT 75 K+ L I + + F S+Y PT+ D+Y + G P L + DTAGQE++ +R Sbjct: 22 KSALTIQFIQSYFVSDYDPTIEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAG 81 Query: 76 DVFLVCFSVVSPSSFENVKEKWVPEIT-HHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQ 134 FL+ F++ SF V + + + P +LVG + DL Q Sbjct: 82 HGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLE------------SQ 129 Query: 135 KPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 + + A V Y E SA + + F++ + A Sbjct: 130 RQVPRSEASAFGASHH-VAYFEASAKLRLNVDEAFEQLVRAV 170 >2ATV-A nrPDB Length = 196 Score = 158 bits (401), Expect = 9e-40, Method: Composition-based stats. Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 18/177 (10%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62 +K + G VGK+ L++ + T +F EY PT+ Y I E ++ + DTAGQE Sbjct: 28 EVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEILDTAGQE 87 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENV--KEKWVPEITHHCPKTPFLLVGTQIDLR 120 D + R + F++ + + SFE V + + EI +LVG + DL Sbjct: 88 DTIQ-REGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKK-PKNVTLILVGNKADL- 144 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQK-GLKNVFDEAILAA 176 + + ++ E EKLA +L A + ECSA T + + +F E Sbjct: 145 -----------DHSRQVSTEEGEKLATEL-ACAFYECSACTGEGNITEIFYELCREV 189 >4FMC-F nrPDB Length = 117 Score = 158 bits (399), Expect = 2e-39, Method: Composition-based stats. Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 3/116 (2%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA-VTVMIGGEPYTLGLFDTAGQEDY 64 +++GD VGK+CLL+ + + + Y+ T+ ++ T+ + G+ L ++DTAGQE + Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERF 60 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDL 119 + Y +V + V SF NVK+ W+ EI + LLVG + DL Sbjct: 61 RTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYASENVNKLLVGNKCDL 115 >2N1B-A nrPDB Length = 261 Score = 156 bits (396), Expect = 4e-39, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 17/179 (9%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDN-YAVTVMIGGEPYTLGLFDTAGQ 61 K V+VGDG GKT + + T +F +YV T+ + + P ++DTAGQ Sbjct: 51 QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 110 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 E + LR Y Q ++ F V S +++NV W ++ C P +L G ++D++D Sbjct: 111 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVLCGNKVDIKD 169 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP 180 + + +++K ++Y + SA + + F + P Sbjct: 170 RKVKAKSIVFHRKK---------------NLQYYDISAKSNYNFEKPFLWLARKLIGDP 213 >5UWI-A nrPDB Length = 237 Score = 156 bits (395), Expect = 5e-39, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 17/179 (9%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDN-YAVTVMIGGEPYTLGLFDTAGQ 61 K V+VGDG GKT + + T +F +YV T+ + + P ++DTAGQ Sbjct: 31 QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 90 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 E + LR Y Q ++ F V S +++NV W ++ C P +L G ++D++D Sbjct: 91 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVLCGNKVDIKD 149 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP 180 + + +++K ++Y + SA + + F + P Sbjct: 150 RKVKAKSIVFHRKK---------------NLQYYDISAKSNYNFEKPFLWLARKLIGDP 193 >5CLL-A nrPDB Length = 191 Score = 156 bits (394), Expect = 7e-39, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 17/179 (9%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDN-YAVTVMIGGEPYTLGLFDTAGQ 61 K V+VGDG GKT + + T +F +YV T+ + + P ++DTAGQ Sbjct: 10 QFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQ 69 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 E + LR Y Q ++ F V S +++NV W ++ C P +L G ++D++D Sbjct: 70 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP-NWHRDLVRVCENIPIVLCGNKVDIKD 128 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP 180 + + +++K ++Y + SA + + F + P Sbjct: 129 RKVKAKSIVFHRKK---------------NLQYYDISAKSNYNFEKPFLWLARKLIGDP 172 >2CJW-A nrPDB Length = 192 Score = 155 bits (393), Expect = 1e-38, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 79/191 (41%), Gaps = 21/191 (10%) Query: 1 MQTIKCVVVGDGAVGKTCLLISY--TTNKFPSEYVPTVFDNYAVTVMIGGEPYT---LGL 55 M + V++G+ VGK+ L + + S+ D Y T+M+ GE T L + Sbjct: 4 MTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDM 63 Query: 56 FDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVP-EITHHCPKTPFLLVG 114 ++ G+ ++ L D +L+ +S+ +SFE E + P +LVG Sbjct: 64 WENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVG 121 Query: 115 TQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAIL 174 + DL + ++ ++ A + D K++E SA Q +K +F+ + Sbjct: 122 NKSDL----------VRCREVSVSEGRACAVVFD---CKFIETSAAVQHNVKELFEGIVR 168 Query: 175 AALEPPEPKKS 185 + K+ Sbjct: 169 QVRLRRDSKEK 179 >3T5G-A nrPDB Length = 181 Score = 155 bits (392), Expect = 1e-38, Method: Composition-based stats. Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 18/175 (10%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K ++G +VGK+ L I + +F Y PT+ + + + + G+ Y L L DTAGQ++Y Sbjct: 8 KIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKLITVNGQEYHLQLVDTAGQDEY 67 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVK---EKWVPEITHHCPKTPFLLVGTQIDLRD 121 + +++ +SV S SFE +K K + + + P +LVG + DL Sbjct: 68 SIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLDMVGKV--QIPIMLVGNKKDL-- 123 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 + ++ I+ E + LA A ++E SA + +VF IL A Sbjct: 124 ----------HMERVISYEEGKALAESWNA-AFLESSAKENQTAVDVFRRIILEA 167 >3Q85-A nrPDB Length = 169 Score = 155 bits (391), Expect = 1e-38, Method: Composition-based stats. Identities = 43/176 (24%), Positives = 71/176 (40%), Gaps = 16/176 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYV-PTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62 K ++VG+ VGK+ L ++ + + D Y +M+ E TL ++D Q Sbjct: 3 FKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQG 62 Query: 63 DYDR-LRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLR 120 D L+ D FL+ FSV SF V E + P +LVG + DL Sbjct: 63 DAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDLPVILVGNKSDL- 121 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 + + ++ E LA L + K++E SA + +F+ A+ Sbjct: 122 -----------ARSREVSLEEGRHLAGTL-SCKHIETSAALHHNTRELFEGAVRQI 165 >2G3Y-A nrPDB Length = 211 Score = 154 bits (389), Expect = 2e-38, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 78/190 (41%), Gaps = 21/190 (11%) Query: 2 QTIKCVVVGDGAVGKTCLLISY--TTNKFPSEYVPTVFDNYAVTVMIGGEPYT---LGLF 56 + V++G+ VGK+ L + + S+ D Y T+M+ GE T L ++ Sbjct: 36 TYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMW 95 Query: 57 DTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVP-EITHHCPKTPFLLVGT 115 + G+ ++ L D +L+ +S+ +SFE E + P +LVG Sbjct: 96 ENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGN 153 Query: 116 QIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 + DL + ++ ++ A + D K++E SA Q +K +F+ + Sbjct: 154 KSDL----------VRCREVSVSEGRACAVVFD---CKFIETSAAVQHNVKELFEGIVRQ 200 Query: 176 ALEPPEPKKS 185 + K+ Sbjct: 201 VRLRRDSKEK 210 >2GF0-A nrPDB Length = 199 Score = 153 bits (388), Expect = 3e-38, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 16/160 (10%) Query: 16 KTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQT 75 K+ L++ + F Y+PT+ D Y + TL + DT G + ++ LS + Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYRQVISCDKSVCTLQITDTTGSHQFPAMQRLSISKG 80 Query: 76 DVFLVCFSVVSPSSFENVK--EKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNK 133 F++ FSV S S E + K + +I P +LVG + D Sbjct: 81 HAFILVFSVTSKQSLEELGPIYKLIVQIKGSVEDIPVMLVGNKCD-------------ET 127 Query: 134 QKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173 Q+ + A+ +A++ K ++E SA +K +F E + Sbjct: 128 QREVDTREAQAVAQEWK-CAFMETSAKMNYNVKELFQELL 166 >3WYF-A nrPDB Length = 219 Score = 153 bits (387), Expect = 4e-38, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 17/180 (9%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDN-YAVTVMIGGEPYTLGLFDTAGQ 61 T K V+VGDG GKT + + T +F +Y+ T+ + ++ ++DTAG Sbjct: 12 TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGL 71 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 E + LR Y ++ F V S +++NV W ++ C P +L G ++D+++ Sbjct: 72 EKFGGLRDGYYINAQCAIIMFDVTSRITYKNVP-NWHRDLVRVCENIPIVLCGNKVDVKE 130 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 + + +++K ++Y + SA + + F P+ Sbjct: 131 RKVKAKTITFHRKK---------------NLQYYDISAKSNYNFEKPFLWLARKLAGNPQ 175 >5XOJ-A nrPDB Length = 182 Score = 152 bits (385), Expect = 7e-38, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 17/180 (9%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDN-YAVTVMIGGEPYTLGLFDTAGQ 61 T K V+VGDG GKT + + T +F +Y+ T+ + ++ ++DTAG Sbjct: 12 TFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGL 71 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 E + LR Y ++ F V S +++NV W ++ C P +L G ++D+++ Sbjct: 72 EKFGGLRDGYYINAQCAIIMFDVTSRITYKNVP-NWHRDLVRVCENIPIVLCGNKVDVKE 130 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPE 181 + + +++K ++Y + SA + + F P+ Sbjct: 131 RKVKAKTITFHRKK---------------NLQYYDISAKSNYNFEKPFLWLARKLAGNPQ 175 >3PIR-A nrPDB Length = 183 Score = 151 bits (383), Expect = 1e-37, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 15/166 (9%) Query: 16 KTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQT 75 K+ L I + F EY PT+ D+Y I + L + DTAGQE++ +R Sbjct: 31 KSALTIQFFQKIFVPEYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEFSAMREQYMRTG 90 Query: 76 DVFLVCFSVVSPSSFENV-KEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQ 134 D FL+ +SV +SFE+V + + P +LV ++DL Sbjct: 91 DGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDL------------MHL 138 Query: 135 KPITPETAEKLARDLKAVKYVECSALT-QKGLKNVFDEAILAALEP 179 + +T + +++A + Y+E SA + F + + + Sbjct: 139 RKVTRDQGKEMATKYN-IPYIETSAKDPPLNVDKTFHDLVRVIRQQ 183 >3RAP-R nrPDB Length = 167 Score = 149 bits (377), Expect = 6e-37, Method: Composition-based stats. Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 14/176 (7%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 M+ K VV+G G VGK+ L + + T F +Y PT+ D Y + + P L + DTAG Sbjct: 1 MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAG 60 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT-HHCPKTPFLLVGTQIDL 119 E + +R L F++ +S+V+ SF+++K I K P +LVG ++DL Sbjct: 61 TEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYEKVPVILVGNKVDL 120 Query: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 + LA + ++E SA ++ + +F E + Sbjct: 121 ESEREVSSSE------------GRALAEEWG-CPFMETSAKSKTMVDELFAEIVRQ 163 >4CZ2-A nrPDB Length = 230 Score = 148 bits (373), Expect = 2e-36, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 72/186 (38%), Gaps = 20/186 (10%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEP--YTLGLFDTAGQ 61 K +V+G+ VGKT ++ Y F Y T+ ++A+ V+ L L+D AG Sbjct: 31 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGL 90 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH-----HCPKTPFLLVGTQ 116 E + + + Y + V F + S+FE V KW ++ + P +L+ + Sbjct: 91 ERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 149 Query: 117 IDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 D D S ++P ++ ++ + E SA ++ + Sbjct: 150 CDQNKDSS------------MSPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKM 197 Query: 177 LEPPEP 182 L + Sbjct: 198 LVNHQS 203 >6FF8-A nrPDB Length = 181 Score = 146 bits (370), Expect = 4e-36, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 20/186 (10%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEP--YTLGLFDTAGQ 61 K +V+G+ VGKT ++ Y F Y T+ ++A+ V+ L L+D AG Sbjct: 9 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGL 68 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH-----HCPKTPFLLVGTQ 116 E + + + Y + V F + S+FE V KW ++ + P +L+ + Sbjct: 69 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 127 Query: 117 IDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 D D S +P ++ ++ + E SA ++ + Sbjct: 128 CDQNKDSSQ------------SPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 175 Query: 177 LEPPEP 182 L + Sbjct: 176 LVNHQS 181 >2NZJ-A nrPDB Length = 175 Score = 145 bits (367), Expect = 1e-35, Method: Composition-based stats. Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 16/173 (9%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 M + V++GD VGKT L + + + D Y T+ + GE TL + DT Sbjct: 2 MALYRVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERTLTVDGEDTTLVVVDTWE 61 Query: 61 QEDYDR--LRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVP-EITHHCPKTPFLLVGTQI 117 E D+ + +++ +S+ SFE+ E + TH P +LVG + Sbjct: 62 AEKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLRRTHQADHVPIILVGNKA 121 Query: 118 DLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFD 170 DL + + ++ E A + K++E SA Q + +F+ Sbjct: 122 DL------------ARCREVSVEEGRACAV-VFDCKFIETSATLQHNVAELFE 161 >5XC3-A nrPDB Length = 176 Score = 145 bits (366), Expect = 1e-35, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 16/175 (9%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMI--GGEPYTLGLFDTAGQ 61 K +++G VGK+ ++ + N+ S PT+ +A +I G+ L ++DTAGQ Sbjct: 6 YKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQ 65 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLL-VGTQIDLR 120 E + + + Y + LV F V SF++V W+ ++ +C T ++L V +ID+ Sbjct: 66 ERFRSITKMYYTNSLGCLVVFDVTDRESFDDVY-YWINDLRINCHTTYYILVVANKIDID 124 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 + ++ +K RD YV S+ + N+F + I Sbjct: 125 KNNWR-----------VSENEIKKFCRD-NDCDYVFASSFESDTVNNLFGKMIDK 167 >3E5H-A nrPDB Length = 178 Score = 135 bits (341), Expect = 9e-33, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 18/182 (9%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVF-DNYAVTVMIGGE-PYTLGLFDT 58 M+ +K VV+GDGA GKT L + F +Y T+ D + + + G TL ++D Sbjct: 4 MRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDI 63 Query: 59 AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKW--VPEITHHCPKTPFL-LVGT 115 GQ ++ L+ + + + SFEN+++ + V +++ P + LVG Sbjct: 64 GGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPLVALVGN 123 Query: 116 QIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 +IDL + I PE + ++ + SA T + F + Sbjct: 124 KIDLE------------HMRTIKPEKHLRFCQENGFSSHFV-SAKTGDSVFLCFQKVAAE 170 Query: 176 AL 177 L Sbjct: 171 IL 172 >3Q72-A nrPDB Length = 166 Score = 133 bits (335), Expect = 5e-32, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 65/174 (37%), Gaps = 15/174 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63 K +++G VGK+ L + Y ++++ GE +L ++D Q+ Sbjct: 3 YKVLLLGAPGVGKSALARIF-GGVEDGPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDG 61 Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVP-EITHHCPKTPFLLVGTQIDLRDD 122 L D +++ +SV SFE E V P +LVG + DL Sbjct: 62 GRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLRRARQTDDVPIILVGNKSDLV-- 119 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 + + ++ + A + K++E SA ++ +F+ + Sbjct: 120 ----------RSREVSVDEGRACAV-VFDCKFIETSAALHHNVQALFEGVVRQI 162 >4DJT-A nrPDB Length = 218 Score = 131 bits (331), Expect = 1e-31, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 67/165 (40%), Gaps = 17/165 (10%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVF-DNYAVTVMIG-GEPYTLGLFDTAG 60 T K ++GDG VGKT + +F Y TV N+ VT + G ++DTAG Sbjct: 11 TYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAG 70 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPK-TPFLLVGTQIDL 119 QE L+ + Y ++ F V S + +N+ +WV E P ++ +ID+ Sbjct: 71 QEKKAVLKDVYYIGASGAILFFDVTSRITCQNLA-RWVKEFQAVVGNEAPIVVCANKIDI 129 Query: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKG 164 ++ +KL K E Y E SA T Sbjct: 130 KNRQKISKKLVMEVLKGKNYE-------------YFEISAKTAHN 161 >3CLV-A nrPDB Length = 208 Score = 129 bits (324), Expect = 9e-31, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 78/215 (36%), Gaps = 54/215 (25%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY---------------------- 40 + K V++G+ +VGK+ +++ T + F T+ ++ Sbjct: 7 SYKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNEKNN 66 Query: 41 -------AVTVMIGGE---------PYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSV 84 V+I + ++DTAGQE Y + PL Y +V F + Sbjct: 67 NINSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIVVFDI 126 Query: 85 VSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEK 144 + ++ + K WV ++ +LV +ID + + +K Sbjct: 127 SNSNTLDRAKT-WVNQLK-ISSNYIIILVANKID-------------KNKFQVDILEVQK 171 Query: 145 LARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 A+D + +++ SA T +KN+F + Sbjct: 172 YAQD-NNLLFIQTSAKTGTNIKNIFYMLAEEIYKN 205 >3C5C-A nrPDB Length = 187 Score = 128 bits (321), Expect = 2e-30, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 71/178 (39%), Gaps = 18/178 (10%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62 + ++G GK+ L + + T +F SEY P + D Y+ + +P L + DTA + Sbjct: 21 EVNLAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETVDHQPVHLRVMDTADLD 80 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPK----TPFLLVGTQID 118 FLV +SV + ++ + H + P LL+G ++D Sbjct: 81 TPRNCER-YLNWAHAFLVVYSV-DSRQSFDSSSSYLELLALHAKETQRSIPALLLGNKLD 138 Query: 119 LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 + + + +T LA + + + L + +++VF EA+ A Sbjct: 139 M------------AQYRQVTKAEGVALAGRFGCLFFEVSACLDFEHVQHVFHEAVREA 184 >3IHW-A nrPDB Length = 184 Score = 122 bits (306), Expect = 9e-29, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 17/176 (9%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62 +K +VG+ + GK+ L+ Y T + E P + +++ G+ Y L + D G Sbjct: 20 ELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGG-RFKKEIVVDGQSYLLLIRDEGGPP 78 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT-HHCPKTPFLLVGTQIDLRD 121 + L+ ++ VF FS+ SF+ V ++ + + + P +LVGTQ Sbjct: 79 E---LQFAAWVDAVVF--VFSLEDEISFQTVYNYFLRLCSFRNASEVPMVLVGTQ----- 128 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAAL 177 + ++ + I A KL+ DLK Y E A ++ VF + + Sbjct: 129 -----DAISAANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKVV 179 >5C1S-A nrPDB Length = 391 Score = 118 bits (297), Expect = 1e-27, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 21/178 (11%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + I+ +VVG VGKT L + F + + V I + + + D AGQ Sbjct: 61 KEIRLLVVGSSGVGKTTLC-----DCFFESHQSQGEETREKHVQIDNDFIRISISDIAGQ 115 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-KTPFLLVGTQIDLR 120 + + Y D LV + + SF ++K W+P+I +C T +++G + D Sbjct: 116 QSFYAC-DNPYDGYDAILVMYDITELKSFTDLKTMWLPDIFLYCNIDTQIIIIGNKKDQE 174 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 D + IT + AE+ A+D + ++ E S + +FD L+ Sbjct: 175 ID------------RIITRKEAEQFAQD-RLCQFYEISTKD-DSCQLLFDCISRDFLQ 218 Score = 77.6 bits (190), Expect = 3e-15, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 61/163 (37%), Gaps = 22/163 (13%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY---AVTVMIGGEPYTLGLFDTAG 60 I+ ++VGD VGKT + + PT D + Y + + D Sbjct: 223 IRMLMVGDQNVGKTTFIRKFALQ------DPTGHDFMNAITTRFEMEKIKYEIIMIDWGF 276 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR 120 + P + L+ + + + SF+N+ K+ P I + ++VG + DL Sbjct: 277 YNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKFSDVAGVIVGYKTDLE 336 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQK 163 Q+ IT A LA D KYVE S+ + Sbjct: 337 ------------AQRKITMGDALTLA-DWLGYKYVEMSSKDTE 366 >6HLU-A nrPDB Length = 974 Score = 109 bits (273), Expect = 8e-25, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 66/188 (35%), Gaps = 26/188 (13%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT-------VMIGG--EPY 51 +Q IK ++GDG GKT LL F + T N + + Sbjct: 478 LQEIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKEC 537 Query: 52 TLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL 111 +D GQE ++ V+++ + S+ K W+ I + K+P + Sbjct: 538 LFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDSN----KHYWLRHIEKYGGKSPVI 593 Query: 112 LVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDE 171 +V +ID + IE+ N++ P + S G++++ Sbjct: 594 VVMNKID-ENPSYNIEQKKINERFPAIENR------------FHRISCKNGDGVESIAKS 640 Query: 172 AILAALEP 179 A L P Sbjct: 641 LKSAVLHP 648 >3DPU-A nrPDB Length = 535 Score = 108 bits (269), Expect = 2e-24, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 66/188 (35%), Gaps = 26/188 (13%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT-------VMIGG--EPY 51 +Q IK ++GDG GKT LL F + T N + + Sbjct: 39 LQEIKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKEC 98 Query: 52 TLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL 111 +D GQE ++ V+++ + S+ K W+ I + K+P + Sbjct: 99 LFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDSN----KHYWLRHIEKYGGKSPVI 154 Query: 112 LVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDE 171 +V +ID + IE+ N++ P + S G++++ Sbjct: 155 VVMNKID-ENPSYNIEQKKINERFPAIENR------------FHRISCKNGDGVESIAKS 201 Query: 172 AILAALEP 179 A L P Sbjct: 202 LKSAVLHP 209 >3D6T-B nrPDB Length = 171 Score = 106 bits (265), Expect = 6e-24, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 6/134 (4%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNK-----FPSEYVPTVFDNYAVTVMIGGEP-YTLGLFD 57 +K ++VG+ GKT LL K S V ++ + + + L ++D Sbjct: 1 MKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWD 60 Query: 58 TAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQI 117 AG+E++ P Q ++L + + + + + W+ I +P +LVGT + Sbjct: 61 FAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARASSSPVILVGTHL 120 Query: 118 DLRDDPSTIEKLAK 131 D+ D+ ++K Sbjct: 121 DVSDEKQRKACMSK 134 >2IWR-A nrPDB Length = 178 Score = 94.6 bits (234), Expect = 2e-20, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 69/185 (37%), Gaps = 19/185 (10%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62 ++ V+GD GK+ L+ + T + T + Y +++ G+ + + + + AG Sbjct: 7 ELRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVDGQTHLVLIREEAGAP 65 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVK--EKWVPEITHHC-PKTPFLLVGTQIDL 119 D D + FS+ +SF+ V + + LVGTQ Sbjct: 66 DAK-----FSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQ--- 117 Query: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP 179 ++++ + + + A L D+K Y E A + VF E + Sbjct: 118 -------DRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTL 170 Query: 180 PEPKK 184 + ++ Sbjct: 171 RKQQQ 175 >4WNR-A nrPDB Length = 349 Score = 90.7 bits (224), Expect = 3e-19, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 53/179 (29%), Gaps = 19/179 (10%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTA 59 + +K ++VGDG GKT LL F T N + + +D Sbjct: 39 LNEVKVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQGINIKKWGFKDKDKEIKVNFWDFG 98 Query: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDL 119 GQE + ++++ E W+ I +P L+ +ID Sbjct: 99 GQEIMHATHQFFLSKRSLYILVLDSRRDEK----AEYWLKHIRSFGGDSPVLVALNKIDE 154 Query: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE 178 K + K I + S +G++ + L+ Sbjct: 155 NPSFELNRKFLQEKYPSIK--------------GFFRISCKEDRGIEGFSQKLKKELLK 199 >2AL7-A nrPDB Length = 186 Score = 83.0 bits (204), Expect = 8e-17, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 52/166 (31%), Gaps = 14/166 (8%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + ++ +VG GKT + + +F + +PTV N + T+ ++D GQ Sbjct: 21 EEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRK---VTKGNVTIKIWDIGGQ 77 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH-HCPKTPFLLVGTQIDLR 120 + + + + E + + + P L++G + DL Sbjct: 78 PRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLP 137 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLK 166 + + + K I + S + + Sbjct: 138 NALDEKQLIEKMNLSAIQDREICCYS----------ISCKEKDNID 173 >4ILE-A nrPDB Length = 184 Score = 80.7 bits (198), Expect = 3e-16, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 50/166 (30%), Gaps = 14/166 (8%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + ++ +VG GKT + + +F + +PTV N I T+ L+D GQ Sbjct: 21 EEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRK---ITKGNVTIKLWDIGGQ 77 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH-HCPKTPFLLVGTQIDLR 120 + + + E K + + P L++G + DL Sbjct: 78 PRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLP 137 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLK 166 E + K I + S + + Sbjct: 138 GALDEKELIEKMNLSAIQDREICCYS----------ISCKEKDNID 173 >2YC4-C nrPDB Length = 208 Score = 78.8 bits (193), Expect = 2e-15, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 60/164 (36%), Gaps = 22/164 (13%) Query: 5 KCVVVGDGAVGKTCLLISYTTN--KFPSEYVPTVFDNY---AVTVMIGGEPYTLGLFDTA 59 K VVG+ VGK+ L+ +T+ KF +Y T VT+ L L DTA Sbjct: 22 KVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFLLDTA 81 Query: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPK----TPFLLVGT 115 G + Y + ++ F V S SFE+ K W + P +LV Sbjct: 82 GSDLYKEQISQYWNGVYYAILVFDVSSMESFESCKA-WFELLKSARPDRERPLRAVLVAN 140 Query: 116 QIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSA 159 + DL + + A+ A + + + SA Sbjct: 141 KTDLPPQRH-----------QVRLDMAQDWATT-NTLDFFDVSA 172 >3LRP-A nrPDB Length = 181 Score = 69.9 bits (170), Expect = 7e-13, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 49/137 (35%), Gaps = 5/137 (3%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + ++ ++VG A GKT +L +PT+ N + + ++D GQ Sbjct: 16 KDVRILMVGLDAAGKTTILYK-VKLGEVVTTIPTIGFNVE---TVEFRNISFTVWDVGGQ 71 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV-GTQIDLR 120 + L Y TD + ++ +E+ I K +LV + DL Sbjct: 72 DKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDLP 131 Query: 121 DDPSTIEKLAKNKQKPI 137 + S E K I Sbjct: 132 NAMSAAEVTEKLHLNTI 148 >1YZG-A nrPDB Length = 179 Score = 69.5 bits (169), Expect = 9e-13, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 46/120 (38%), Gaps = 5/120 (4%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 Q K ++VG GKT +L + N+ PT+ N V+ + ++D GQ Sbjct: 15 QEHKVIIVGLDNAGKTTILYQFLMNEVVHT-SPTIGSNVEEIVV---KNTHFLMWDIGGQ 70 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV-GTQIDLR 120 E Y T+ ++ + KE+ + H + +L+ + D++ Sbjct: 71 ESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMK 130 >4YLG-A nrPDB Length = 173 Score = 69.1 bits (168), Expect = 1e-12, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 16/162 (9%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + ++ ++VG A GKT +L + + +PT+ N + + + ++D GQ Sbjct: 12 KEMRILMVGLDAAGKTSILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQ 67 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV-GTQIDLR 120 + L Y T + +E+ + + + LLV + DL Sbjct: 68 DKIRPLWRHYYQNTQAIIFVVDSNDRDRIGEAREELMKMLNEDEMRNAILLVFANKHDLP 127 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQ 162 S E K + I Y + S T Sbjct: 128 QAMSISEVTEKLGLQTIKNRK-----------WYCQTSCATN 158 >3LVQ-E nrPDB Length = 497 Score = 69.1 bits (168), Expect = 1e-12, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 5/137 (3%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + ++ +++G A GKT +L + +PTV N + ++D GQ Sbjct: 321 KEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTY---KNVKFNVWDVGGQ 376 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV-GTQIDLR 120 + L Y T + + +++ I + +L+ + DL Sbjct: 377 DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLP 436 Query: 121 DDPSTIEKLAKNKQKPI 137 D E K I Sbjct: 437 DAMKPHEIQEKLGLTRI 453 >2H16-A nrPDB Length = 183 Score = 68.4 bits (166), Expect = 2e-12, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 51/141 (36%), Gaps = 5/141 (3%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 Q K ++VG GKT +L ++ N+ PT+ N ++I ++D GQ Sbjct: 21 QEHKVIIVGLDNAGKTTILYQFSMNEVVHT-SPTIGSN-VEEIVINN--TRFLMWDIGGQ 76 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV-GTQIDLR 120 E Y T+ +V +E+ + H + LL+ + D++ Sbjct: 77 ESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVK 136 Query: 121 DDPSTIEKLAKNKQKPITPET 141 + + E K I Sbjct: 137 ECMTVAEISQFLKLTSIKDHQ 157 >2A5F-A nrPDB Length = 175 Score = 67.6 bits (164), Expect = 4e-12, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 5/137 (3%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + ++ +++G A GKT +L + +PTV N + ++D GQ Sbjct: 12 KEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTY---KNVKFNVWDVGGQ 67 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV-GTQIDLR 120 + L Y T + + +++ I + +L+ + DL Sbjct: 68 DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLP 127 Query: 121 DDPSTIEKLAKNKQKPI 137 D E K I Sbjct: 128 DAMKPHEIQEKLGLTRI 144 >6FAE-B nrPDB Length = 213 Score = 67.2 bits (163), Expect = 4e-12, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 50/131 (38%), Gaps = 5/131 (3%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 Q+++ ++VG A GKT +L + + +PT+ N + + + ++D GQ Sbjct: 48 QSMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQ 103 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV-GTQIDLR 120 + L + T + +E+ + + + LLV + DL Sbjct: 104 DKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLP 163 Query: 121 DDPSTIEKLAK 131 + + E K Sbjct: 164 NAMNAAEITDK 174 >3O47-A nrPDB Length = 329 Score = 66.0 bits (160), Expect = 1e-11, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 49/131 (37%), Gaps = 5/131 (3%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + ++ ++VG A GKT +L + + +PT+ N + + + ++D GQ Sbjct: 164 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQ 219 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV-GTQIDLR 120 + L + T + +E+ + + + LLV + DL Sbjct: 220 DKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLP 279 Query: 121 DDPSTIEKLAK 131 + + E K Sbjct: 280 NAMNAAEITDK 290 >6BBQ-A nrPDB Length = 520 Score = 65.3 bits (158), Expect = 2e-11, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 45/137 (32%), Gaps = 5/137 (3%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + ++ +++G A GKT +L + +PTV N + ++D G Sbjct: 358 KEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTY---KNVKFNVWDVGGL 413 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV-GTQIDLR 120 + L Y T + + +++ I + +L+ + DL Sbjct: 414 DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLP 473 Query: 121 DDPSTIEKLAKNKQKPI 137 D E K I Sbjct: 474 DAMKPHEIQEKLGLTRI 490 >5NZV-F nrPDB Length = 181 Score = 64.9 bits (157), Expect = 2e-11, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 48/137 (35%), Gaps = 5/137 (3%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + ++ ++VG GKT +L + + +PT+ N + + + ++D GQ Sbjct: 16 KEMRILMVGLDGAGKTTVLYKLKLGEVITT-IPTIGFNVE---TVQYKNISFTVWDVGGQ 71 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV-GTQIDLR 120 + L Y T+ + S +E + + LV + DL Sbjct: 72 DRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQDLP 131 Query: 121 DDPSTIEKLAKNKQKPI 137 + S E K I Sbjct: 132 EAMSAAEITEKLGLHSI 148 >3AQ4-A nrPDB Length = 184 Score = 63.3 bits (153), Expect = 6e-11, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 48/131 (36%), Gaps = 5/131 (3%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + ++ ++VG A GKT +L + + +PT+ N + + + ++D GQ Sbjct: 19 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQ 74 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV-GTQIDLR 120 + L + T + +++ + + LLV + DL Sbjct: 75 DKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLP 134 Query: 121 DDPSTIEKLAK 131 + + E K Sbjct: 135 NAMNAAEITDK 145 >1Z6X-A nrPDB Length = 180 Score = 63.0 bits (152), Expect = 7e-11, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 46/131 (35%), Gaps = 5/131 (3%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + ++ ++VG A GKT +L + + +PT+ N + + ++D GQ Sbjct: 16 KQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNICFTVWDVGGQ 71 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPE-ITHHCPKTPFLLVGTQIDLR 120 + L + T + + V ++ + LL + DL Sbjct: 72 DRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLP 131 Query: 121 DDPSTIEKLAK 131 + + E K Sbjct: 132 NAMAISEMTDK 142 >6DFF-C nrPDB Length = 193 Score = 63.0 bits (152), Expect = 7e-11, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 5/130 (3%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62 ++ ++VG A GKT +L + + +PT+ N + + + ++D G + Sbjct: 29 EMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGLD 84 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV-GTQIDLRD 121 L + T + +E+ + + + LLV + DL + Sbjct: 85 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 144 Query: 122 DPSTIEKLAK 131 + E K Sbjct: 145 AMNAAEITDK 154 >1J2J-A nrPDB Length = 166 Score = 62.6 bits (151), Expect = 9e-11, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 48/130 (36%), Gaps = 5/130 (3%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62 +++ ++VG A GKT +L + + +PT+ N + + + ++D G + Sbjct: 2 SMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGLD 57 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV-GTQIDLRD 121 L + T + +E+ + + + LLV + DL + Sbjct: 58 KIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPN 117 Query: 122 DPSTIEKLAK 131 + E K Sbjct: 118 AMNAAEITDK 127 >4ZI3-A nrPDB Length = 190 Score = 62.6 bits (151), Expect = 1e-10, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 57/167 (34%), Gaps = 15/167 (8%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 Q ++ +++G GKT LL + S PT N + + + L ++D GQ Sbjct: 16 QEVRILLLGLDNAGKTTLLKQLASED-ISHITPTQGFNIK---SVQSQGFKLNVWDIGGQ 71 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPK-TPFLLVGTQIDLR 120 + TD+ + FE ++ + P L+ + DL Sbjct: 72 RKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLL 131 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKN 167 E I +++ CSALT +G+++ Sbjct: 132 TAAPASEIAEGLNLHTI-----RDRVWQIQS-----CSALTGEGVQD 168 >5UF8-A nrPDB Length = 181 Score = 62.2 bits (150), Expect = 1e-10, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 49/137 (35%), Gaps = 5/137 (3%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + ++ ++VG A GKT +L + + +PT+ N + + + ++D GQ Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQ 71 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV-GTQIDLR 120 + L + T + +E+ + + LLV + DL Sbjct: 72 DKIRPLWRYYFQNTQGIIFVVDSNDRDRIAEAREELQQMLNEDELRDALLLVFANKQDLP 131 Query: 121 DDPSTIEKLAKNKQKPI 137 + + E K I Sbjct: 132 NAMNAAEITEKLGLHSI 148 >4C0K-A nrPDB Length = 423 Score = 62.2 bits (150), Expect = 1e-10, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 14/128 (10%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM-------IGGEPYTLGLF 56 KC V+G GKT + + + + + V+ + G+ L L Sbjct: 247 YKCHVIGPKGSGKTGMCRGFL----VEDMHKLIGKEFKTNVVNCINSVQVYGQEKHLILR 302 Query: 57 DTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQ 116 D + D L+P DV + + +P SFE V ++ K P ++VGT+ Sbjct: 303 DIDVRHALDPLQPQE-VNCDVACLVYDSSNPRSFEYVARIYIKYYAE--SKIPVMIVGTK 359 Query: 117 IDLRDDPS 124 D+ + Sbjct: 360 CDMDERRQ 367 >2B6H-A nrPDB Length = 192 Score = 61.0 bits (147), Expect = 3e-10, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 5/131 (3%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + ++ ++VG A GKT +L + + +PT+ N + + ++D GQ Sbjct: 28 KQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNICFTVWDVGGQ 83 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV-GTQIDLR 120 + L + T + + ++ + + LLV + D+ Sbjct: 84 DKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMP 143 Query: 121 DDPSTIEKLAK 131 + E K Sbjct: 144 NAMPVSELTDK 154 >1MOZ-A nrPDB Length = 183 Score = 58.7 bits (141), Expect = 1e-09, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 5/118 (4%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + ++ +++G GKT +L + + PT+ N + + L ++D GQ Sbjct: 17 KELRILILGLDGAGKTTILYRLQIGEVVTT-KPTIGFNVE---TLSYKNLKLNVWDLGGQ 72 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV-GTQID 118 Y T + ++ + + LLV + D Sbjct: 73 TSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQD 130 >3BH6-A nrPDB Length = 164 Score = 58.7 bits (141), Expect = 1e-09, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 55/166 (33%), Gaps = 15/166 (9%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62 ++ +++G GKT LL + S PT N + + + L ++D G Sbjct: 4 EVRILLLGLDNAGKTTLLKQLASED-ISHITPTQGFNIK---SVQSQGFKLNVWDIGGLR 59 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPK-TPFLLVGTQIDLRD 121 + TD+ + FE ++ + P L+ + DL Sbjct: 60 KIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLT 119 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKN 167 E I +++ CSALT +G+++ Sbjct: 120 AAPASEIAEGLNLHTI-----RDRVWQIQS-----CSALTGEGVQD 155 >5EE5-B nrPDB Length = 171 Score = 58.0 bits (139), Expect = 2e-09, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 50/175 (28%), Gaps = 15/175 (8%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + ++ +++G GKT +L + + +PT+ N + ++D G Sbjct: 6 REMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIGFNVETVTY---KNLKFQVWDLGGL 61 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV-GTQIDLR 120 Y TD + K + V + + L+V + D+ Sbjct: 62 TSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDME 121 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 ++ E + + SA GL + + Sbjct: 122 QAMTSSEMANSLGLPALKDRKWQIFK----------TSATKGTGLDEAMEWLVET 166 >1KSG-A nrPDB Length = 186 Score = 56.8 bits (136), Expect = 6e-09, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 41/119 (34%), Gaps = 5/119 (4%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + ++ +++G GKT +L + + PT+ N + + L ++D GQ Sbjct: 17 RELRLLMLGLDNAGKTTILKKF-NGEDVDTISPTLGFNIK---TLEHRGFKLNIWDVGGQ 72 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHCPKTPFLLVGTQIDL 119 + + TD + ++ + + + L+ + DL Sbjct: 73 KSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDL 131 >3GEH-A nrPDB Length = 462 Score = 52.9 bits (126), Expect = 7e-08, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 68/191 (35%), Gaps = 38/191 (19%) Query: 4 IKCVVVGDGAVGKTCLLISYTTN--KFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG- 60 +K +VG VGK+ LL +++ + ++ T D +++GG P + DTAG Sbjct: 225 LKVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQLVVGGIPV--QVLDTAGI 282 Query: 61 -----QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWV---PEITHHCPKTPFLL 112 Q + + LV ++ + W EI P +L Sbjct: 283 RETSDQVEKIGVERSRQAANTADLVLLTI-------DAATGWTTGDQEIYEQVKHRPLIL 335 Query: 113 VGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEA 172 V +IDL + I V +A ++G+ ++ + A Sbjct: 336 VMNKIDLVEKQLITSLEYPENITQI-----------------VHTAAAQKQGIDSL-ETA 377 Query: 173 ILAALEPPEPK 183 IL ++ + + Sbjct: 378 ILEIVQTGKVQ 388 >2H57-A nrPDB Length = 190 Score = 52.6 bits (125), Expect = 1e-07, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 11/132 (8%) Query: 2 QTIKCVVVGDGAVGKTCLLISYT-TNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 + + + +G GKT ++ +N +PT+ +++ + +FD +G Sbjct: 20 KEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIG--FSIE-KFKSSSLSFTVFDMSG 76 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKW-----VPEITHHCPKTPFLLVGT 115 Q Y L Y + + KE+ P+I H + P L Sbjct: 77 QGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHR--RIPILFFAN 134 Query: 116 QIDLRDDPSTIE 127 ++DLRD ++++ Sbjct: 135 KMDLRDAVTSVK 146 >4V0N-A nrPDB Length = 169 Score = 51.8 bits (123), Expect = 2e-07, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 45/120 (37%), Gaps = 5/120 (4%) Query: 2 QTIKCVVVGDGAVGKTCLLISYT-TNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 + + +VVG GKT ++ + +E PTV + V + P T +FD +G Sbjct: 5 KKVNVLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVG--FTVD-EVEKGPLTFTVFDMSG 61 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH-HCPKTPFLLVGTQIDL 119 Y L Y + D + +++ + H + K P L + DL Sbjct: 62 AGRYRTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYFANKKDL 121 >5DE3-A nrPDB Length = 169 Score = 51.4 bits (122), Expect = 3e-07, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 56/169 (33%), Gaps = 25/169 (14%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 + +V+G GKT +L + + + PT N ++ G + L ++D GQ+ Sbjct: 2 RILVLGLDNAGKTTILKALSEED-ITTITPTQGFN-IKSLSRDG--FNLKIWDIGGQKSI 57 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDL---- 119 + QTD + + + + P L+ + DL Sbjct: 58 RPYWRNYFDQTDALIYVIDSADSKRLSESEFELTELLQEEKMTGVPLLVFANKQDLVGAL 117 Query: 120 -RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKN 167 D+ ++ L + +P + CSA GLK Sbjct: 118 AADEIASTLDLTSIRDRPWQIQA---------------CSAKQGTGLKE 151 >2GJ9-A nrPDB Length = 172 Score = 50.6 bits (120), Expect = 4e-07, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 53/150 (35%), Gaps = 13/150 (8%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNK--FPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 +K V+ G GK+ LL + + ++ T D + I G P L + DTAG Sbjct: 5 MKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMP--LHIIDTAGL 62 Query: 62 -------EDYDRLRP-LSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV 113 E R Q D L + + + E W I K P +V Sbjct: 63 REASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPA-EIWPEFIARLPAKLPITVV 121 Query: 114 GTQIDLRDDPSTIEKLAKNKQKPITPETAE 143 + D+ + + ++ + ++ T E Sbjct: 122 RNKADITGETLGMSEVNGHALIRLSARTGE 151 >4ARZ-A nrPDB Length = 310 Score = 50.6 bits (120), Expect = 4e-07, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 58/150 (38%), Gaps = 14/150 (9%) Query: 5 KCVVVGDGAVGKTCLLISYTTN--KFPS-EYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 K +++G GK+ + +N F + T+ ++ +G TL L+D GQ Sbjct: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN--MTLNLWDCGGQ 65 Query: 62 E-----DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVK--EKWVPEITHHCPKTPFLLVG 114 + + + + + V + F V S ++++ K + ++ + P ++ Sbjct: 66 DVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLL 125 Query: 115 TQIDL--RDDPSTIEKLAKNKQKPITPETA 142 ++DL D + ++ + E Sbjct: 126 HKMDLVQLDKREELFQIMMKNLSETSSEFG 155 >2GAO-A nrPDB Length = 208 Score = 50.3 bits (119), Expect = 5e-07, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 60/170 (35%), Gaps = 9/170 (5%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K V +G GKT LL ++ ++VPT+ + + + T FD G E Sbjct: 37 KLVFLGLDNAGKTTLLHMLKDDRL-GQHVPTL---HPTSEELTIAGMTFTTFDLGGHEQA 92 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRDDP 123 R+ P + + S K + +T P L++G +ID D Sbjct: 93 RRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAI 152 Query: 124 STIEKLAKNKQKPITPETAEKLARDLKAVKYVE---CSALTQKGLKNVFD 170 S + T ++L A +E CS L ++G F Sbjct: 153 SEEKLREIFGLYGQTTGKGNVTLKELNARP-MEVFMCSVLKRQGYGEGFR 201 >6CES-A nrPDB Length = 313 Score = 49.5 bits (117), Expect = 9e-07, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 49/140 (35%), Gaps = 12/140 (8%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYV---PTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 K +++G GKT + N + T+ ++ +G L L+D GQ Sbjct: 9 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGN--LVLNLWDCGGQ 66 Query: 62 E-----DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKW--VPEITHHCPKTPFLLVG 114 + + R + +V + F V S +++ + I + P + Sbjct: 67 DTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKIFCLV 126 Query: 115 TQIDLRDDPSTIEKLAKNKQ 134 ++DL + + ++ Sbjct: 127 HKMDLVQEDQRDLIFKEREE 146 >1XZP-A nrPDB Length = 482 Score = 49.5 bits (117), Expect = 9e-07, Method: Composition-based stats. Identities = 36/198 (18%), Positives = 67/198 (33%), Gaps = 32/198 (16%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTN--KFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 + ++ V+VG VGK+ LL ++ T D + ++I G + DTA Sbjct: 242 RGLRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRG--ILFRIVDTA 299 Query: 60 G--------QEDYDRLRPLS-YPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPF 110 G E R L + D+ L SP E+ +I + Sbjct: 300 GVRSETNDLVERLGIERTLQEIEKADIVLFVLDASSPLDEED------RKILERIKNKRY 353 Query: 111 LLVGTQID----LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLK 166 L+V ++D + ++ + I+ E L L+ Y E + Sbjct: 354 LVVINKVDVVEKINEEEIKNKLGTDRHMVKISALKGEGL-EKLEESIYRET--------Q 404 Query: 167 NVFDEAILAALEPPEPKK 184 +F+ + + K+ Sbjct: 405 EIFERGSDSLITNLRQKQ 422 >2YWH-A nrPDB Length = 600 Score = 48.3 bits (114), Expect = 2e-06, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 55/191 (28%), Gaps = 36/191 (18%) Query: 15 GKTCLLISYTT-------NKFPSEYVPTVFDNYAVTVMI------------GGEPYTLGL 55 GK+ L + + + T+ + + G Y L L Sbjct: 18 GKSTLADRLLEYTGAISEREKREQLLDTLDVERERGITVKMQAVRMFYKAKDGNTYKLHL 77 Query: 56 FDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGT 115 DT G D+ + + L+ + V W + V Sbjct: 78 IDTPGHVDFSYEVSRALAACEGALLLIDASQGIEAQTVANFW----KAVEQDLVIIPVIN 133 Query: 116 QIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 +IDL K + + PE A + SA G++ + EAI+ Sbjct: 134 KIDLPSADVDRVKKQIEEVLGLDPEEA------------ILASAKEGIGIEEIL-EAIVN 180 Query: 176 ALEPPEPKKSR 186 + PP+ + Sbjct: 181 RIPPPKGDPQK 191 >2LKD-A nrPDB Length = 178 Score = 47.9 bits (113), Expect = 2e-06, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 58/175 (33%), Gaps = 22/175 (12%) Query: 6 CVVVGDGAVGKTCLL--ISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 63 ++G GKT LL I ++ T A V + + T DT G E Sbjct: 11 VTIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQHIG-AYQVTVNDKKITF--LDTPGHEA 67 Query: 64 YDRLRPLSYPQTDVFLVCFSVVS---PSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR 120 + +R TD+ ++ + P + E + P ++ ++D Sbjct: 68 FTTMRARGAQVTDIVILVVAADDGVMPQTVEAINH-------AKAANVPIIVAINKMDKP 120 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 + + + E + + SA T++GL ++ + +L Sbjct: 121 EANPDRVMQELMEYNLVPEEWG-------GDTIFCKLSAKTKEGLDHLLEMILLV 168 >3J8G-X nrPDB Length = 490 Score = 47.6 bits (112), Expect = 3e-06, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 66/196 (33%), Gaps = 36/196 (18%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYV--PTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 IK +VG VGK+ L + Y T D+ + + G Y L DTAG Sbjct: 203 IKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLI--DTAGV 260 Query: 62 EDYDRLRPL-----------SYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPF 110 ++ + +V ++ S +++ + + ++ Sbjct: 261 RKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLS---LLGFILNSGRSLV 317 Query: 111 LLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYV---ECSALTQKGLKN 167 ++V + D + + + E L L + + SAL G+ N Sbjct: 318 IVV-NKWD-------------GLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGN 363 Query: 168 VFDEAILAALEPPEPK 183 +F E++ A + + Sbjct: 364 LF-ESVREAYDSSTRR 378 Score = 31.0 bits (69), Expect = 0.30, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 41/131 (31%), Gaps = 16/131 (12%) Query: 6 CVVVGDGAVGKTCLLISY--TTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG--- 60 +VG VGK+ L T + +++ D I G + DT G Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEGREFICI--DTGGIDG 62 Query: 61 -----QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGT 115 + L+ + DV L F V + + E + + P LV Sbjct: 63 TEDGVETRMAEQSLLAIEEADVVL--FMVDARAGLMPADEAIAKHLRSR--EKPTFLVAN 118 Query: 116 QIDLRDDPSTI 126 + D D + Sbjct: 119 KTDGLDPDQAV 129 >1M2O-B nrPDB Length = 190 Score = 47.6 bits (112), Expect = 4e-06, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 5/124 (4%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K + +G GKT LL ++ + PT + + + FD G Sbjct: 25 KLLFLGLDNAGKTTLLHMLKNDRLATL-QPT---WHPTSEELAIGNIKFTTFDLGGHIQA 80 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT-HHCPKTPFLLVGTQIDLRDDP 123 RL +P+ + + P F+ + + PF+++G +ID + Sbjct: 81 RRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAV 140 Query: 124 STIE 127 S E Sbjct: 141 SEAE 144 >6GNI-B nrPDB Length = 167 Score = 47.2 bits (111), Expect = 5e-06, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 5/124 (4%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K + +G GKT LL ++ + PT + + + FD G Sbjct: 3 KLLFLGLDNAGKTTLLHMLKNDRLATL-QPT---WHPTSEELAIGNIKFTTFDLGGHIQA 58 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT-HHCPKTPFLLVGTQIDLRDDP 123 RL +P+ + + P F+ + + PF+++G +ID + Sbjct: 59 RRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAV 118 Query: 124 STIE 127 S E Sbjct: 119 SEAE 122 >2X77-A nrPDB Length = 189 Score = 47.2 bits (111), Expect = 5e-06, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 15/167 (8%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + I+ +++G GKT +L + V TV + + + ++D GQ Sbjct: 21 RKIRVLMLGLDNAGKTSILYRLHLG----DVVTTVPTVGVNLETLQYKNISFEVWDLGGQ 76 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLV-GTQIDLR 120 + TD + K + + + LL+ + DL Sbjct: 77 TGVRPYWRCYFSDTDAVIYVVDSTDRDRMGVAKHELYALLDEDELRKSLLLIFANKQDLP 136 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKN 167 D S E + I + R VK S+ T GL Sbjct: 137 DAASEAEIAEQLGVSSI-------MNRTWTIVK---SSSKTGDGLVE 173 >1F6B-A nrPDB Length = 198 Score = 45.6 bits (107), Expect = 1e-05, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 58/170 (34%), Gaps = 9/170 (5%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K V +G GKT LL ++ ++VPT+ + + + T FD G Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDRL-GQHVPTL---HPTSEELTIAGMTFTTFDLGGHIQA 82 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQIDLRDDP 123 R+ P + + KE+ +T P L++G +ID + Sbjct: 83 RRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAI 142 Query: 124 STIEKLAKNKQKPITPETAEKLARDLKAVK---YVECSALTQKGLKNVFD 170 S T ++L A ++ CS L ++G F Sbjct: 143 SEERLREMFGLYGQTTGKGSVSLKELNARPLEVFM-CSVLKRQGYGEGFR 191 >5IMR-C nrPDB Length = 610 Score = 44.9 bits (105), Expect = 2e-05, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 61/187 (32%), Gaps = 36/187 (19%) Query: 15 GKTCL-------LISYTTNKFPSEYVPTVFDNYAVTVMI------------GGEPYTLGL 55 GK+ L + + + +++ ++ + I GE Y L Sbjct: 21 GKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDGEEYVFHL 80 Query: 56 FDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGT 115 DT G D+ + + L+ E + + ++ H + V Sbjct: 81 IDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYMALEHGH----VIIPVIN 136 Query: 116 QIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 +IDL + L + + + A + S T +G++ + EAI+ Sbjct: 137 KIDLPNARPLEVALEVEEVLGLPADEA------------IFASGKTGEGVEEIL-EAIVQ 183 Query: 176 ALEPPEP 182 + PP+ Sbjct: 184 RIPPPKG 190 >5J8B-z nrPDB Length = 679 Score = 44.9 bits (105), Expect = 2e-05, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 61/187 (32%), Gaps = 36/187 (19%) Query: 15 GKTCL-------LISYTTNKFPSEYVPTVFDNYAVTVMI------------GGEPYTLGL 55 GK+ L + + + +++ ++ + I GE Y L Sbjct: 90 GKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKASAVRVTYRAKDGEEYVFHL 149 Query: 56 FDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGT 115 DT G D+ + + L+ E + + ++ H + V Sbjct: 150 IDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYMALEHGH----VIIPVIN 205 Query: 116 QIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 +IDL + L + + + A + S T +G++ + EAI+ Sbjct: 206 KIDLPNARPLEVALEVEEVLGLPADEA------------IFASGKTGEGVEEIL-EAIVQ 252 Query: 176 ALEPPEP 182 + PP+ Sbjct: 253 RIPPPKG 259 >5DN8-A nrPDB Length = 446 Score = 44.1 bits (103), Expect = 3e-05, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 61/183 (33%), Gaps = 31/183 (16%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVP--TVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 IK ++G VGK+ L+ + Y T D+ + E YTL DTAG Sbjct: 179 IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDENYTLI--DTAGI 236 Query: 62 EDYDRLRPL-----------SYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPF 110 +++ + DV + + +++ + + I Sbjct: 237 RRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDL--RLLNRIVEAGVSLII 294 Query: 111 LLVGTQID-LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 + + D L + + A +++ P AR ++ SAL G+ +F Sbjct: 295 AV--NKWDGLNIEERDNVRNAIDRRMPF-----VDFARRY----FI--SALHGTGVGKLF 341 Query: 170 DEA 172 Sbjct: 342 RAI 344 >2DYK-A nrPDB Length = 161 Score = 44.1 bits (103), Expect = 3e-05, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 38/119 (31%), Gaps = 7/119 (5%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 K V+VG VGK+ L + ++ + L DT G Sbjct: 3 KVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRGRFLLVDTGGLWSG 62 Query: 65 DRLRPLSYPQTDVFL-----VCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQID 118 D+ + D L V F+V + + + P +LV T++D Sbjct: 63 DKWEKKIQEKVDRALEDAEVVLFAVDGRAELTQADYEVAEYLRRKGK--PVILVATKVD 119 >3T1O-A nrPDB Length = 198 Score = 43.7 bits (102), Expect = 4e-05, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 55/193 (28%), Gaps = 33/193 (17%) Query: 3 TIKCVVVGDGAVGKTC-LLISYTT------NKFP----SEYVPTVFDNYAVTV-MIGGEP 50 K V G G GKT L Y+ + + FD + + + G Sbjct: 14 NFKIVYYGPGLSGKTTNLKWIYSKVPEGRKGEMVSLATEDERTLFFDFLPLDIGEVKGFK 73 Query: 51 YTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVV------SPSSFENVKEKWVPEITHH 104 L+ GQ Y+ R L D + + S N++E + E Sbjct: 74 TRFHLYTVPGQVFYNASRKLILRGVDGIVFVADSAPNRLRANAESMRNMREN-LAEYGLT 132 Query: 105 CPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKG 164 P ++ + DL D L + + + +E A KG Sbjct: 133 LDDVPIVIQVNKRDLPD------ALPVEMVRAVVDPEGK--------FPVLEAVATEGKG 178 Query: 165 LKNVFDEAILAAL 177 + E L Sbjct: 179 VFETLKEVSRLVL 191 >1MKY-A nrPDB Length = 439 Score = 43.3 bits (101), Expect = 6e-05, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 45/131 (34%), Gaps = 20/131 (15%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNK--FPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 IK +VG VGK+ L + + S T D V I G Y DTAG Sbjct: 180 AIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRKYVF--VDTAG 237 Query: 61 QEDYDRLRP------LSYP------QTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT 108 R+ P +Y + DV ++ + ++ + + E Sbjct: 238 LRRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRMAGLMERRGRAS-- 295 Query: 109 PFLLVGTQIDL 119 ++V + DL Sbjct: 296 --VVVFNKWDL 304 Score = 36.8 bits (84), Expect = 0.007, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 55/193 (28%), Gaps = 34/193 (17%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG----- 60 ++VG VGK+ L K V + T L DT G Sbjct: 4 VLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEWYGKTFKLVDTCGVFDNP 63 Query: 61 ----QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQ 116 + + + D+ L + E+ E + T +LV + Sbjct: 64 QDIISQKMKEVTLNMIREADLVLFVVDGKRGITKED--ESLADFLRKSTVDT--ILVANK 119 Query: 117 IDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVE---CSALTQKGLKNVFDEAI 173 + + ++ + PE L ++ + E SA L + + I Sbjct: 120 A----------ENLREFEREVKPE--------LYSLGFGEPIPVSAEHNINLDTMLETII 161 Query: 174 LAALEPPEPKKSR 186 E +S+ Sbjct: 162 KKLEEKGLDLESK 174 >5DI3-B nrPDB Length = 263 Score = 43.3 bits (101), Expect = 6e-05, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 5/130 (3%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + I ++G GKT LL S + + PT + T + G+ Y + +FD G Sbjct: 3 RKITIALLGLDNAGKTTLLNS-IQGEVDRDTTPTFG--FNSTTLNEGK-YKIEVFDLGGG 58 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT-HHCPKTPFLLVGTQIDLR 120 ++ + + + P FE K + P + + DL Sbjct: 59 KNIRGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIFANKQDLP 118 Query: 121 DDPSTIEKLA 130 E + Sbjct: 119 TAAPAAEVVK 128 >4M9Q-A nrPDB Length = 227 Score = 43.3 bits (101), Expect = 6e-05, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 5/130 (3%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 + I ++G GKT LL S + + PT + T + G+ Y + +FD G Sbjct: 3 RKITIALLGLDNAGKTTLLNS-IQGEVDRDTTPTFG--FNSTTLNEGK-YKIEVFDLGGG 58 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEIT-HHCPKTPFLLVGTQIDLR 120 ++ + + + P FE K + P + + DL Sbjct: 59 KNIRGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIFANKQDLP 118 Query: 121 DDPSTIEKLA 130 E + Sbjct: 119 TAAPAAEVVK 128 >5KU1-A nrPDB Length = 424 Score = 42.5 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 45/127 (35%), Gaps = 15/127 (11%) Query: 4 IKCVVVGDGAVGKT----CLLISYT--TNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFD 57 +C V+G GK+ LL K ++ N TV + G+ L L D Sbjct: 243 FRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSYYAIN---TVYVYGQEKYLLLHD 299 Query: 58 TAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQI 117 + E + DV + + V +P SFE + + P L+V + Sbjct: 300 ISESEFLTEAEIIC----DVVCLVYDVSNPKSFEYCARIFKQHFMD--SRIPCLIVAAKS 353 Query: 118 DLRDDPS 124 DL + Sbjct: 354 DLHEVKQ 360 >5KSO-A nrPDB Length = 190 Score = 42.5 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 45/127 (35%), Gaps = 15/127 (11%) Query: 4 IKCVVVGDGAVGKT----CLLISYT--TNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFD 57 +C V+G GK+ LL K ++ N TV + G+ L L D Sbjct: 9 FRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSYYAIN---TVYVYGQEKYLLLHD 65 Query: 58 TAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQI 117 + E + DV + + V +P SFE + + P L+V + Sbjct: 66 ISESEFLTEAEIIC----DVVCLVYDVSNPKSFEYCARIFKQHFMD--SRIPCLIVAAKS 119 Query: 118 DLRDDPS 124 DL + Sbjct: 120 DLHEVKQ 126 >3JB9-B nrPDB Length = 984 Score = 42.2 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 52/164 (31%), Gaps = 30/164 (18%) Query: 15 GKTCLL------------------ISYTTNKFPSEYVPTVFDNYAVTVMI---GGEPYTL 53 GK+ LL + YT + + +T+ + G+ + Sbjct: 153 GKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMSIKSTPLTLAVSDMKGKTFAF 212 Query: 54 GLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC--PKTPFL 111 DT G D+ +D ++ V+ I H P + Sbjct: 213 QCIDTPGHVDFVDEVAAPMAISDGVVLVVDVIEGVMINT------TRIIKHAILHDMPIV 266 Query: 112 LVGTQID-LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKY 154 LV ++D L + A +K + + E + + + K +KY Sbjct: 267 LVLNKVDRLILELRLPPNDAYHKLRHVIDEVNDNICQISKDLKY 310 >5LAD-A nrPDB Length = 404 Score = 42.2 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 52/140 (37%), Gaps = 20/140 (14%) Query: 6 CVVVGDGAVGKTCLLISYTTN--KFPSEYVPTVFD-NYAVTVMIGGEPYTLGLFDTAGQE 62 VV G VGK+ + + SEY T D Y + P TL DT G + Sbjct: 12 IVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTTTDPVYKSMELYPVGPVTL--VDTPGLD 69 Query: 63 DYDRL--------RPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVG 114 D L R + Y D ++ P+ +E+ E+ + PF++V Sbjct: 70 DVGELGRLRVEKARRVFYR-ADCGILVTD-SEPTPYEDDVVNLFKEM-----EIPFVVVV 122 Query: 115 TQIDLRDDPSTIEKLAKNKQ 134 +ID+ + + K + Sbjct: 123 NKIDVLGEKAEELKGLYESR 142 >5YMX-A nrPDB Length = 203 Score = 41.8 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 53/159 (33%), Gaps = 21/159 (13%) Query: 5 KCVVVGDGAVGKTCLLISYTTNK-----------FPSEYVPTVFDNYA--VTVMIGGEPY 51 K V G G GKT L Y NK +E T+F ++ I G Sbjct: 14 KIVYYGPGLCGKTTNL-QYIYNKTAAETKGKLISLSTETDRTLFFDFLPLSLGEIRGFKT 72 Query: 52 TLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSV------VSPSSFENVKEKWVPEITHHC 105 L+ GQ YD R L D + + S EN++ + E + Sbjct: 73 RFHLYTVPGQVFYDASRKLILKGVDGVVFVADSQIERMEANMESLENLRIN-LAEQGYDL 131 Query: 106 PKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEK 144 K P+++ + DL + + E + I A Sbjct: 132 NKIPYVIQYNKRDLPNAVTVEEMRKALNHRNIPEYQAVA 170 >6IAE-A nrPDB Length = 223 Score = 41.4 bits (96), Expect = 2e-04, Method: Composition-based stats. Identities = 29/208 (13%), Positives = 62/208 (29%), Gaps = 38/208 (18%) Query: 4 IKCVVVGDGAVGKTCLL--ISYTTNKFPSEYVPTV-FDNYAVTVMIGG-----------E 49 +K +V+G GK+ + ++ T + EY T V + + + Sbjct: 10 VKILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVEIALDDTRRSGRQAAGLK 69 Query: 50 PYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTP 109 + L+D G + P D + F+ S + + W Sbjct: 70 KAVVQLWDVGGSSKHQAGWPAIASNADGIIYVFNPEVKGSEKELL-LWYKNFAL------ 122 Query: 110 FLLVGTQIDLRDDPSTIEKLAKNK-----------QKPITPETAEKLARDLKAVKYVECS 158 Q +L DD + ++ + + + + L+ ++ +E S Sbjct: 123 -----NQDELDDDNNFKMRVTDGHSLIFSHHSSLPEFAVGDNAIPPMPKQLQGIRALETS 177 Query: 159 ALTQ-KGLKNVFDEAILAALEPPEPKKS 185 Q K FD + + + Sbjct: 178 LDYQSDNFKEAFDALVEQIIASRLAAEE 205 >3EC1-A nrPDB Length = 369 Score = 41.4 bits (96), Expect = 2e-04, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 28/81 (34%), Gaps = 11/81 (13%) Query: 96 KWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYV 155 ++P + P LLVG + DL KL + ++ +A +L Sbjct: 87 SFIPGLPRFAADNPILLVGNKADLLPRSVKYPKLLRWMRR---------MAEELGLCPVD 137 Query: 156 EC--SALTQKGLKNVFDEAIL 174 C SA G+ V + Sbjct: 138 VCLVSAAKGIGMAKVMEAINR 158 >2GTP-A nrPDB Length = 323 Score = 41.4 bits (96), Expect = 2e-04, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 51/184 (27%), Gaps = 32/184 (17%) Query: 29 PSEYVPTVFDNYAVTVMIGG--------EPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLV 80 Y+PT D V G + +FD GQ + + + Sbjct: 133 QPNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIF 192 Query: 81 C-----FSVVSPSSFE-NVKEKWVPEITHHCP-----KTPFLLVGTQIDLRDDPSTIEKL 129 C + +V E N + + C T +L + DL ++ L Sbjct: 193 CVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPL 252 Query: 130 AKNKQK---PITPETAEKL----------ARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 + T E A +D K + A K ++ VFD Sbjct: 253 TICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVI 312 Query: 177 LEPP 180 ++ Sbjct: 313 IKNN 316 Score = 27.9 bits (61), Expect = 2.6, Method: Composition-based stats. Identities = 5/21 (23%), Positives = 13/21 (61%) Query: 2 QTIKCVVVGDGAVGKTCLLIS 22 + +K +++G G GK+ ++ Sbjct: 1 REVKLLLLGAGESGKSTIVKQ 21 >1WF3-A nrPDB Length = 301 Score = 41.0 bits (95), Expect = 3e-04, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 61/202 (30%), Gaps = 30/202 (14%) Query: 6 CVVVGDGAVGKTCLLISYTT-NKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ--- 61 +VG VGK+ LL + P P ++ G + DT G Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRR-QIVFVDTPGLHKP 68 Query: 62 -----EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQ 116 E D+ + + + + P + E+ E + K P LLVG + Sbjct: 69 MDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPED--ELVARALKPLVGKVPILLVGNK 126 Query: 117 IDLRDDPSTIEKLAKN-------------KQKPITPETAEKLARDLKAVKYV-ECSALTQ 162 +D P K ++ + A+ LA + + E A + Sbjct: 127 LDAAKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLALMPEGPFFYPEDYAKS- 185 Query: 163 KGLKNVFDEAILAALEPPEPKK 184 F E + L K+ Sbjct: 186 ---DQTFGEWVAEILREEAMKR 204 >2QAG-A nrPDB Length = 361 Score = 41.0 bits (95), Expect = 3e-04, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 10/79 (12%) Query: 3 TIKCVVVGDGAVGKTCLLIS-YTTNKFPSEYVPTVFDNYAVTVMIGGEPY---------T 52 +VVG+ +GK+ L+ S + T+ +P +P + TV I Sbjct: 37 EFTLMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLR 96 Query: 53 LGLFDTAGQEDYDRLRPLS 71 L + DT G D R Sbjct: 97 LTVVDTPGYGDAINCRDCF 115 >3FTQ-A nrPDB Length = 274 Score = 41.0 bits (95), Expect = 3e-04, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 30/79 (37%), Gaps = 10/79 (12%) Query: 3 TIKCVVVGDGAVGKTCLLIS-YTTNKFPSEYVPTVFDNYAVTVMIGGEPY---------T 52 +VVG+ +GK+ L+ S + T+ +P +P + TV I Sbjct: 5 EFTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLR 64 Query: 53 LGLFDTAGQEDYDRLRPLS 71 L + DT G D R Sbjct: 65 LTVVDTPGYGDAINCRDCF 83 >3R9W-A nrPDB Length = 307 Score = 40.2 bits (93), Expect = 6e-04, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 39/127 (30%), Gaps = 20/127 (15%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGL--FDTAGQ-- 61 +VG VGK+ LL + K S P + + P + DT G Sbjct: 12 VAIVGKPNVGKSTLLNNLLGTK-VSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTPGIYE 70 Query: 62 --------EDYDRLRPLSYPQTDVFLVCFSVVS--PSSFENVKEKWVPEITHHCPKTPFL 111 + S + DV L E + + ++ + P + Sbjct: 71 PKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNK-----PVI 125 Query: 112 LVGTQID 118 +V +ID Sbjct: 126 VVINKID 132 >3GEE-A nrPDB Length = 476 Score = 39.9 bits (92), Expect = 6e-04, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 12/121 (9%) Query: 7 VVVGDGAVGKTCLLISYT-TNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65 V+ G GK+ LL + + ++P +Y I + L DTAG + Sbjct: 237 VIAGKPNAGKSTLLNTLLGQERAIVSHMPGTTRDYIEECFIHDKT-MFRLTDTAGLREAG 295 Query: 66 ------RLRPLSYPQTDVFLVCF--SVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQI 117 +R + L+ + + + + + E + E+ P FL V ++ Sbjct: 296 EEIEHEGIRRSRMKMAEADLILYLLDLGTERLDDELTE--IRELKAAHPAAKFLTVANKL 353 Query: 118 D 118 D Sbjct: 354 D 354 >6GDG-D nrPDB Length = 248 Score = 39.9 bits (92), Expect = 7e-04, Method: Composition-based stats. Identities = 17/140 (12%), Positives = 37/140 (26%), Gaps = 17/140 (12%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64 + +++G GK+ ++ S + + +FD GQ D Sbjct: 37 RLLLLGADNSGKSTIVKQMRILHGGSGGSGGTSGIFETKFQVDK--VNFHMFDVGGQRDE 94 Query: 65 DRLRPLSYPQTDVFLVCFSVVSPSSFENVK--------EKWVPEITHHCPKTPFLLVGTQ 116 R + + + + +W+ I+ +L + Sbjct: 95 RRKWIQCFNDVTAIIFVVDSSDYNRLQEALNLFKSIWNNRWLRTIS-------VILFLNK 147 Query: 117 IDLRDDPSTIEKLAKNKQKP 136 DL + K P Sbjct: 148 QDLLAEKVLAGKSKIEDYFP 167 >5KUT-A nrPDB Length = 189 Score = 39.9 bits (92), Expect = 7e-04, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 12/120 (10%) Query: 6 CVVVGDGAVGKTCLLISYTT---NKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQ 61 C VVG VGK+ L ++ + P YA+ TV + G+ L L + Sbjct: 12 CKVVGACGVGKSAFLQAFLGRGLGHQDTREQPPG---YAIDTVQVNGQEKYLILCEVGTD 68 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 + DV + F P SF + + + +TP L V ++ DL + Sbjct: 69 GLLATSLDATC---DVACLMFDGSDPKSFAHCASVYKHH--YMDGQTPCLFVSSKADLPE 123 >3CB4-D nrPDB Length = 599 Score = 39.5 bits (91), Expect = 9e-04, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 38/131 (29%), Gaps = 22/131 (16%) Query: 47 GGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSV---VSPSSFENVKEKWVPEITH 103 GE Y L DT G D+ S + L+ V + N ++ Sbjct: 67 DGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMDLE- 125 Query: 104 HCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQK 163 + V +IDL I A + CSA T Sbjct: 126 ------VVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVR------------CSAKTGV 167 Query: 164 GLKNVFDEAIL 174 G+++V + + Sbjct: 168 GVQDVLERLVR 178 >5ZZM-A nrPDB Length = 426 Score = 39.5 bits (91), Expect = 9e-04, Method: Composition-based stats. Identities = 42/199 (21%), Positives = 65/199 (32%), Gaps = 44/199 (22%) Query: 6 CVVVGDGAVGKTCLLIS------YTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 +VG GK+ L Y ++ + PT+ + V GE L DT Sbjct: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTL---RRIDVADVGETV---LADTV 253 Query: 60 G-----QEDYDRLRPLSY---PQTDVFLVCFSVVSPSSFENVK--EKWVPEITHHCPKTP 109 G D + Q + L EN++ + EI H + P Sbjct: 254 GFIRHLPHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAH--EIP 311 Query: 110 FLLVGTQID-LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNV 168 LLV +ID L D I++ +NK + SA T G+ + Sbjct: 312 TLLVMNKIDMLEDFEPRIDRDEENKPNRVWL------------------SAQTGAGIPQL 353 Query: 169 FDEAILAALEPPEPKKSRR 187 F A+ L + + R Sbjct: 354 FQ-ALTERLSGEVAQHTLR 371 >2ODE-A nrPDB Length = 350 Score = 39.1 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 52/184 (28%), Gaps = 32/184 (17%) Query: 29 PSEYVPTVFDNYAVTVMIGG--------EPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLV 80 S Y+PT D V G + +FD GQ + + + Sbjct: 163 QSNYIPTQQDVLRTRVKTTGIVETHFTFKDLYFKMFDVGGQRSERKKWIHCFEGVTAIIF 222 Query: 81 C-----FSVVSPSSFE-NVKEKWVPEITHHCPK-----TPFLLVGTQIDLRDDPSTIEKL 129 C + +V E N + + C T +L + DL ++ L Sbjct: 223 CVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTETSIILFLNKKDLFEEKIKRSPL 282 Query: 130 AKNKQK---PITPETAEKL----------ARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 + T E A +D K + A K ++ VFD Sbjct: 283 TICYPEYTGSNTYEEAAAYIQCQFEDLNRRKDTKEIYTHFTCATDTKNVQFVFDAVTDVI 342 Query: 177 LEPP 180 ++ Sbjct: 343 IKNN 346 Score = 26.8 bits (58), Expect = 6.2, Method: Composition-based stats. Identities = 5/21 (23%), Positives = 13/21 (61%) Query: 2 QTIKCVVVGDGAVGKTCLLIS 22 + +K +++G G GK+ ++ Sbjct: 31 KEVKLLLLGAGESGKSTIVKQ 51 >6G79-A nrPDB Length = 225 Score = 39.1 bits (90), Expect = 0.001, Method: Composition-based stats. Identities = 28/206 (13%), Positives = 54/206 (26%), Gaps = 27/206 (13%) Query: 2 QTIKCVVVGDGAVGKTCLLIS----YTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFD 57 + +K +++G GK+ ++ + + V ++ + LFD Sbjct: 29 KDVKLLLLGADNSGKSTIVKQMKIIHGGSGGSGGTTGIVETHFTF------KNLHFRLFD 82 Query: 58 TAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHCPKTPFLLVGTQ 116 GQ + + + C + + + T +L + Sbjct: 83 VGGQRSERKKWIHCFEDVTAIIFCVDLSDYNRMHESLMLFDSICNNKFFIDTSIILFLNK 142 Query: 117 IDLRDDPSTIEKLAKNKQK---PITPETAEKLA--------RDLKAVKYVE-CSALTQKG 164 DL + L + P T E A R Y A Sbjct: 143 KDLFGEKIKKSPLTICFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCHMTCATDTNN 202 Query: 165 LKNVFDEAILAALEPPEPKKSRRCVL 190 + +FD + R C L Sbjct: 203 AQVIFDAVTDIIIANNL----RGCGL 224 >3V00-C nrPDB Length = 356 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 54/184 (29%), Gaps = 34/184 (18%) Query: 30 SEYVPTVFDNYAVTVMIGG--------EPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVC 81 YVPT D V G + +FD GQ + + + C Sbjct: 167 PGYVPTEQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTAIIFC 226 Query: 82 -----FSVVSPSSFE-NVKEKWVPEITHHCP-----KTPFLLVGTQIDLRDDPSTIEKLA 130 + +V E N + + C T +L + DL ++ L Sbjct: 227 VALSDYDLVLAEDEEMNRMHESMHLFNSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLT 286 Query: 131 KNKQKPITPETAEKLARDLKAVKYVE--------------CSALTQKGLKNVFDEAILAA 176 + T E+ A + V+++E A + +K VFD Sbjct: 287 ICYPEYAGSNTYEE-AGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVTDII 345 Query: 177 LEPP 180 ++ Sbjct: 346 IKEN 349 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 6/21 (28%), Positives = 14/21 (66%) Query: 2 QTIKCVVVGDGAVGKTCLLIS 22 +T+K +++G G GK+ ++ Sbjct: 34 RTVKLLLLGAGESGKSTIVKQ 54 >4DCU-A nrPDB Length = 456 Score = 38.3 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 19/145 (13%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNK--FPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG- 60 I+ ++G VGK+ L+ + + S T D + + + DTAG Sbjct: 196 IQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQQE--FVIVDTAGM 253 Query: 61 ---------QEDYDRLRPL-SYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPF 110 E Y LR L + +++V V ++ K + H K Sbjct: 254 RKKGKVYETTEKYSVLRALKAIDRSEVVAVVLDGEEGIIEQD---KRIAGYAHEAGKAVV 310 Query: 111 LLVGTQIDLRDDPSTIEKLAKNKQK 135 ++V + D D + K + + Sbjct: 311 IVV-NKWDAVDKDESTMKEFEENIR 334 Score = 29.8 bits (66), Expect = 0.67, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 48/157 (30%), Gaps = 11/157 (7%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65 +VG VGK+ + + + Y L DT G + D Sbjct: 26 VAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGIDIGD 85 Query: 66 RLRPLSYPQT------DVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQID- 118 Q + ++ F V E+ V +I + K P +L ++D Sbjct: 86 EPFLAQIRQQAEIAMDEADVIIFMVNGREGVTAADEE-VAKILYRTKK-PVVLAVNKLDN 143 Query: 119 --LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVK 153 +R + L + PI+ L L AV Sbjct: 144 TEMRANIYDFYSLGFGEPYPISGTHGLGLGDLLDAVA 180 >4KJZ-A nrPDB Length = 473 Score = 38.3 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 56/174 (32%), Gaps = 18/174 (10%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65 V++G GKT LL Y +E + + T+ DT G E + Sbjct: 75 VVIMGHVDHGKTTLLD-YLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFIDTPGHEAFT 133 Query: 66 RLRPLSYPQTDVFLVCFSVVS---PSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDD 122 +R D+ ++ + P + E + + +IDL Sbjct: 134 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQA 186 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 K ++ + E + SA T +G++++ + +L A Sbjct: 187 DPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMILLLA 233 >4B44-A nrPDB Length = 363 Score = 38.3 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 56/174 (32%), Gaps = 18/174 (10%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65 V++G GKT LL Y +E + + T+ DT G E + Sbjct: 76 VVIMGHVDHGKTTLLD-YLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFIDTPGHEAFT 134 Query: 66 RLRPLSYPQTDVFLVCFSVVS---PSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDD 122 +R D+ ++ + P + E + + +IDL Sbjct: 135 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQA 187 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 K ++ + E + SA T +G++++ + +L A Sbjct: 188 DPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMILLLA 234 >6D4G-A nrPDB Length = 271 Score = 37.9 bits (87), Expect = 0.002, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 19/102 (18%) Query: 76 DVFLVCFSVVSP--SSFENVKEKWVPEITHHCPKT--PFLLVGTQIDLRDDPSTIEKLAK 131 D FL+ V +F++ + K+V + + KT P ++V T+ D + + Sbjct: 163 DGFLLGIDVSRGMNRNFDD-QLKFVSNLYNQLAKTKKPIVIVLTKCDEGVERYIRD---- 217 Query: 132 NKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173 A A K ++ VE SA + + F + Sbjct: 218 ----------AHTFALSKKNLQVVETSARSNVNVDLAFSTLV 249 >3C5H-A nrPDB Length = 255 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 19/102 (18%) Query: 76 DVFLVCFSVVSP--SSFENVKEKWVPEITHHCPKT--PFLLVGTQIDLRDDPSTIEKLAK 131 D FL+ V +F++ + K+V + + KT P ++V T+ D + + Sbjct: 164 DGFLLGIDVSRGMNRNFDD-QLKFVSNLYNQLAKTKKPIVVVLTKCDEGVERYIRD---- 218 Query: 132 NKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAI 173 A A K ++ VE SA + + F + Sbjct: 219 ----------AHTFALSKKNLQVVETSARSNVNVDLAFSTLV 250 >3J4J-A nrPDB Length = 569 Score = 37.5 bits (86), Expect = 0.003, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 56/174 (32%), Gaps = 18/174 (10%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65 V++G GKT LL Y +E + + T+ DT G E + Sbjct: 76 VVIMGHVDHGKTTLLD-YLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFIDTPGHEAFT 134 Query: 66 RLRPLSYPQTDVFLVCFSVVS---PSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDD 122 +R D+ ++ + P + E + + +IDL Sbjct: 135 TIRQRGAKVADIAVIVIAADDGIMPQTEEAIAHAKAAGAK-------LIFAINKIDLPQA 187 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 K ++ + E + SA T +G++++ + +L A Sbjct: 188 DPEKVKRQLMERGFVPEEYG-------GDAIVIPISAKTGQGVQDLLEMILLLA 234 >6GB2-BC nrPDB Length = 657 Score = 37.5 bits (86), Expect = 0.003, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 61/177 (34%), Gaps = 23/177 (12%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDN-----YAVTVMIGGEPYTLGLFDTAG 60 ++G GKT LL + + V T + V++ GE T DT G Sbjct: 113 VTIMGHVDHGKTTLLDKFRKTQ--VAAVETGGITQHIGAFLVSLP-SGEKITF--LDTPG 167 Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-KTPFLLVGTQIDL 119 + +R TD+ ++ + V ++ V I H + P +L + D Sbjct: 168 HAAFSAMRARGAQVTDIVVLVVAADDG-----VMKQTVESIQHAKDAQVPIILAVNKCDK 222 Query: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 + K + E D++AV SALT L + + + A Sbjct: 223 AEADPEKVKKELLAYDVVC----EDYGGDVQAVP---VSALTGDNLMALAEATVALA 272 >1SHZ-A nrPDB Length = 340 Score = 37.2 bits (85), Expect = 0.005, Method: Composition-based stats. Identities = 26/191 (13%), Positives = 49/191 (25%), Gaps = 36/191 (18%) Query: 24 TTNKFPSEYVPTVFDNYAVTVMIGG--------EPYTLGLFDTAGQEDYDRLRPLSYPQT 75 +Y+P+ D G + +FD GQ + + Sbjct: 145 LDKLGVPDYIPSQQDILLARRPTKGIHETHFTFKDLHFKMFDVGGQRSERKKWFECFEGV 204 Query: 76 DVFLVCFSVVSPSSFENVKEKWVPEITHHC-------------PKTPFLLVGTQIDLRDD 122 + C ++ + + E H T +L + DL ++ Sbjct: 205 TAIIFCVALSDYD--QVLMEDRQTNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEE 262 Query: 123 PSTIEKLAKNKQK---PITPETAEKL----------ARDLKAVKYVECSALTQKGLKNVF 169 L + T E A +D K + A K ++ VF Sbjct: 263 KIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVF 322 Query: 170 DEAILAALEPP 180 D ++ Sbjct: 323 DAVTDVIIKNN 333 Score = 30.6 bits (68), Expect = 0.40, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 10/63 (15%) Query: 2 QTIKCVVVGDGAVGKTCLLISY-------TTNKFPSEYVPTVFDNYAV--TVMIGGEPYT 52 + +K +++G G GK+ L + E+ PT++ N V++ Sbjct: 11 REVKLLLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDARE-K 69 Query: 53 LGL 55 L + Sbjct: 70 LHI 72 >3T5D-A nrPDB Length = 274 Score = 36.8 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 9/67 (13%) Query: 3 TIKCVVVGDGAVGKTCLLIS-YTTNKFPSEY-------VPTVFDNYAVT-VMIGGEPYTL 53 +VVG+ +GK+ L+ S + T+ + EY TV + + GG L Sbjct: 8 EFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLL 67 Query: 54 GLFDTAG 60 + DT G Sbjct: 68 TIVDTPG 74 >5CYO-A nrPDB Length = 274 Score = 36.8 bits (84), Expect = 0.006, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 10/68 (14%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYV-PTVFDNYAVTVMI---------GGEPYT 52 +VVG +GK+ L+ + +K + V PT + T+ I G Sbjct: 4 EFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMK 63 Query: 53 LGLFDTAG 60 L + DT G Sbjct: 64 LTVIDTPG 71 >2E87-A nrPDB Length = 357 Score = 36.0 bits (82), Expect = 0.010, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 64/185 (34%), Gaps = 36/185 (19%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTV-MIGGEPYTLGLFDTAGQEDY 64 V+ G VGK+ LL + TT K P F + V + + DT G D Sbjct: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYP--FTTRGINVGQFEDGYFRYQIIDTPGLLD- 226 Query: 65 DRLRPLSYPQ-------------TDVFLVCFSVVSPSSF-ENVKEKWVPEITHHCPKTPF 110 RP+S ++ + F F + E+ PF Sbjct: 227 ---RPISERNEIEKQAILALRYLGNLIIYIFDPSEHCGFPLEEQIHLFEEVHGEFKDLPF 283 Query: 111 LLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFD 170 L+V +ID+ D+ + EK ++ K + ++ SAL G+ V + Sbjct: 284 LVVINKIDVADEENIKRL--------------EKFVKE-KGLNPIKISALKGTGIDLVKE 328 Query: 171 EAILA 175 E I Sbjct: 329 EIIKT 333 >2QAG-C nrPDB Length = 418 Score = 35.6 bits (81), Expect = 0.012, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 9/67 (13%) Query: 3 TIKCVVVGDGAVGKTCLLIS-YTTNKFPSEY-------VPTVFDNYAVT-VMIGGEPYTL 53 +VVG+ +GK+ L+ S + T+ + EY TV + + GG L Sbjct: 31 EFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLL 90 Query: 54 GLFDTAG 60 + DT G Sbjct: 91 TIVDTPG 97 >3H2Y-A nrPDB Length = 368 Score = 35.6 bits (81), Expect = 0.012, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 7/73 (9%) Query: 96 KWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYV 155 W+P + LLVG + DL + + +K K +A++L + V + Sbjct: 85 SWLPGLHRFVGNNKVLLVGNKADL-----IPKSVKHDKVKHWMRYSAKQLGLKPEDVFLI 139 Query: 156 ECSALTQKGLKNV 168 SA +G+ + Sbjct: 140 --SAAKGQGIAEL 150 Score = 28.7 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 5/59 (8%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLG----LFDTAG 60 VVG VGK+ + +F E + ++ + L L+DT G Sbjct: 163 VYVVGCTNVGKSTFINRMIK-EFSDETENVITTSHFPGTTLDLIDIPLDEESSLYDTPG 220 >5IRR-A nrPDB Length = 308 Score = 35.6 bits (81), Expect = 0.015, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 16/24 (66%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTT 25 + IK +VVGD +GKT L+ S + Sbjct: 25 KYIKLIVVGDSGLGKTTLIKSLIS 48 >5KH0-A nrPDB Length = 396 Score = 34.8 bits (79), Expect = 0.023, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 48/139 (34%), Gaps = 20/139 (14%) Query: 6 CVVVGDGAVGKTCLLISYTTNK--FPSEYVPTVFDNYAVTVMIGG-EPYTLGLFDTAGQE 62 + G VGK+ + + + S T D ++ + P TL DT G + Sbjct: 11 IAITGRRNVGKSSFMNALIGQEVSIVSNVAGTTTDPVFKSMELSPVGPITLI--DTPGLD 68 Query: 63 DYDRL--------RPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVG 114 D L + Y L+ + P +FE K E+ + P+ + Sbjct: 69 DVGELGIKRIKKAKKSLYRADCGILIVDDI--PGNFEEQIIKLFKEL-----EIPYFIAI 121 Query: 115 TQIDLRDDPSTIEKLAKNK 133 +ID D + ++ K Sbjct: 122 NKIDTIDHENIEKEYKKYN 140 >3IZY-P nrPDB Length = 537 Score = 34.8 bits (79), Expect = 0.025, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 58/175 (33%), Gaps = 19/175 (10%) Query: 6 CVVVGDGAVGKTCLLISYTTNK---FPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62 ++G GKT LL + + + + V++ GE T DT G Sbjct: 7 VTIMGHVDHGKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLP-SGEKITF--LDTPGHA 63 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP-KTPFLLVGTQIDLRD 121 + +R TD+ ++ + V ++ V I H P +L + D + Sbjct: 64 AFSAMRARGTQVTDIVILVVAADDG-----VMKQTVESIQHAKDAHVPIVLAINKCDKAE 118 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 K + + V+ V SALT + + + + I A Sbjct: 119 ADPEKVKKELLAYDVVCEDYG-------GDVQAVHVSALTGENMMALAEATIALA 166 >3PR1-A nrPDB Length = 195 Score = 34.5 bits (78), Expect = 0.027, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 62/181 (34%), Gaps = 36/181 (19%) Query: 6 CVVVGDGAVGKTCLLISYTTNK--FPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG--- 60 VG VGK+ LL + K F S+ T ++ + Y D G Sbjct: 26 VAFVGRSNVGKSSLLNALFNRKIAFVSK---TPGKTRSINFYLVNSKYYF--VDLPGYGY 80 Query: 61 -----QED--YDRLRPLSYPQ----TDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTP 109 +E + RL + VFL+ + P + + +W+ + P Sbjct: 81 AKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLMMVEWMKSL-----NIP 135 Query: 110 FLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVF 169 F +V T++D K ++ E K+ + S++T +G+ + Sbjct: 136 FTIVLTKMD----------KVKMSERAKKLEEHRKVFSKYGEYTIIPTSSVTGEGISELL 185 Query: 170 D 170 D Sbjct: 186 D 186 >3IEU-A nrPDB Length = 301 Score = 34.5 bits (78), Expect = 0.028, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 53/175 (30%), Gaps = 32/175 (18%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ--ED 63 +VG VGK+ LL K + + + Y DT G E+ Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 70 Query: 64 YDRLRPL-----SYPQTDVFLVCFSVVSPSSFENVKEKWVPE-----ITHHCPKTPFLLV 113 + L S DV LV F V +W P+ K P +L Sbjct: 71 KRAINRLMNKAASSSIGDVELVIFVVE--------GTRWTPDDEMVLNKLREGKAPVILA 122 Query: 114 GTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNV 168 ++D + + + + LA + + V SA T + + Sbjct: 123 VNKVDNVQEKADLLPHLQF------------LASQMNFLDIVPISAETGLNVDTI 165 >2VNE-A nrPDB Length = 201 Score = 34.1 bits (77), Expect = 0.041, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 8/45 (17%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGE 49 K ++GDG VG T L +++ +FP EY +++ E Sbjct: 67 KLEIIGDGGVG-TILDMTFVPGEFPHEYK-------EKFILVDNE 103 >5NON-A nrPDB Length = 165 Score = 34.1 bits (77), Expect = 0.042, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 8/45 (17%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGE 49 K ++GDG VG T L +++ +FP EY +++ E Sbjct: 51 KLEIIGDGGVG-TILDMTFVPGEFPHEYK-------EKFILVDNE 87 >4TN1-B nrPDB Length = 345 Score = 33.7 bits (76), Expect = 0.048, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 69/222 (31%), Gaps = 52/222 (23%) Query: 6 CVVVGDGAVGKTCLL----ISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYT--------- 52 C ++G GKT LL + + Y I + Sbjct: 13 CCILGHVRTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 53 ----LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVV---SPSSFENVKEKWVPEITHHC 105 L + DT G E + LR ++ ++ ++ P + E++ + + E Sbjct: 73 KVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESL--RLLRERK--- 127 Query: 106 PKTPFLLVGTQID------------LRDDPSTIEKLAKNKQKPITPETAEKLARD-LKAV 152 TPF++ +ID R+ + K +N+ + + + A + Sbjct: 128 --TPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNSE 185 Query: 153 KYVE------------CSALTQKGLKNVFDEAILAALEPPEP 182 + E SA T +G+ ++ + E Sbjct: 186 LFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQERMAS 227 >1HEY-A nrPDB Length = 128 Score = 33.7 bits (76), Expect = 0.049, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 6/95 (6%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA-- 59 + +K +VVG+G GK+ + F + + + GG + + ++ Sbjct: 3 KELKFLVVGNGGTGKSTVRNLLKELGFNNVEDAEDGVDALNKLQAGGYGFVISDWNMPNM 62 Query: 60 -GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENV 93 G E +R L V + + EN+ Sbjct: 63 DGLELLKTIRA---DGAMSALPVLMVTAEAKKENI 94 >5YT0-A nrPDB Length = 364 Score = 33.3 bits (75), Expect = 0.060, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 46/133 (34%), Gaps = 27/133 (20%) Query: 6 CVVVGDGAVGKTCLL----------------ISYTTNKF-PSEYVPTVFDNYAVTVMIGG 48 VV+G GKT LL + P++ + + + + + Sbjct: 19 VVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKL 78 Query: 49 EPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVV---SPSSFENVKEKWVPEITHHC 105 L DT G E + LR D ++ ++ P ++E + + + E Sbjct: 79 VIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEAL--ELLKERR--- 133 Query: 106 PKTPFLLVGTQID 118 PFL+ +ID Sbjct: 134 --VPFLIAANKID 144 >4QJ3-A nrPDB Length = 379 Score = 33.3 bits (75), Expect = 0.070, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 53/182 (29%), Gaps = 32/182 (17%) Query: 29 PSEYVPTVFDNYAVTVMIGG--------EPYTLGLFDTAGQ--EDYDRLRPLSYPQTDVF 78 Y+PT D V V G + + D GQ E + + +F Sbjct: 189 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 248 Query: 79 LVCFSVVSPSSFENVKEKWVPEITH---------HCPKTPFLLVGTQIDLRDDPSTIEKL 129 LV S E+ E + E + +L + DL ++ L Sbjct: 249 LVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHL 308 Query: 130 AKNKQKPITPETAEKLARDLKAVKYVE-------------CSALTQKGLKNVFDEAILAA 176 + P+ + AR+ +V+ A + ++ VF Sbjct: 309 VDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTI 368 Query: 177 LE 178 L+ Sbjct: 369 LQ 370 Score = 28.3 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 5/21 (23%), Positives = 12/21 (57%) Query: 2 QTIKCVVVGDGAVGKTCLLIS 22 + +K +++G G GK+ + Sbjct: 58 RELKLLLLGTGESGKSTFIKQ 78 >4NCL-A nrPDB Length = 457 Score = 33.3 bits (75), Expect = 0.070, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 69/222 (31%), Gaps = 52/222 (23%) Query: 6 CVVVGDGAVGKTCLL----ISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYT--------- 52 C ++G GKT LL + + Y I + Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 53 ----LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVV---SPSSFENVKEKWVPEITHHC 105 L + DT G E + LR ++ ++ ++ P + E++ + + E Sbjct: 73 KVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESL--RLLRERK--- 127 Query: 106 PKTPFLLVGTQID------------LRDDPSTIEKLAKNKQKPITPETAEKLARD-LKAV 152 TPF++ +ID R+ + K +N+ + + + A + Sbjct: 128 --TPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNSE 185 Query: 153 KYVE------------CSALTQKGLKNVFDEAILAALEPPEP 182 + E SA T +G+ ++ + E Sbjct: 186 LFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQERMAS 227 >4N3G-A nrPDB Length = 603 Score = 32.9 bits (74), Expect = 0.079, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 69/222 (31%), Gaps = 52/222 (23%) Query: 6 CVVVGDGAVGKTCLL----ISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYT--------- 52 C ++G GKT LL + + Y I + Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 53 ----LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVV---SPSSFENVKEKWVPEITHHC 105 L + DT G E + LR ++ ++ ++ P + E++ + + E Sbjct: 73 KVPGLLIIDTPGHESFSNLRSRGSSLCNIAILVVDIMHGLEPQTIESL--RLLRERK--- 127 Query: 106 PKTPFLLVGTQID------------LRDDPSTIEKLAKNKQKPITPETAEKLARD-LKAV 152 TPF++ +ID R+ + K +N+ + + + A + Sbjct: 128 --TPFVVALNKIDRLYGWKKIENNGFRESFALQNKAVQNEFRNRLDQVKLQFAEQGFNSE 185 Query: 153 KYVE------------CSALTQKGLKNVFDEAILAALEPPEP 182 + E SA T +G+ ++ + E Sbjct: 186 LFYENKNFARYVSLVPTSAHTGEGIPDMLKLIVQLCQERMAS 227 >2BCJ-Q nrPDB Length = 353 Score = 32.9 bits (74), Expect = 0.079, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 53/182 (29%), Gaps = 32/182 (17%) Query: 29 PSEYVPTVFDNYAVTVMIGG--------EPYTLGLFDTAGQ--EDYDRLRPLSYPQTDVF 78 Y+PT D V V G + + D GQ E + + +F Sbjct: 163 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 222 Query: 79 LVCFSVVSPSSFENVKEKWVPEITH---------HCPKTPFLLVGTQIDLRDDPSTIEKL 129 LV S E+ E + E + +L + DL ++ L Sbjct: 223 LVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHL 282 Query: 130 AKNKQKPITPETAEKLARDLKAVKYVE-------------CSALTQKGLKNVFDEAILAA 176 + P+ + AR+ +V+ A + ++ VF Sbjct: 283 VDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTI 342 Query: 177 LE 178 L+ Sbjct: 343 LQ 344 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 5/21 (23%), Positives = 12/21 (57%) Query: 2 QTIKCVVVGDGAVGKTCLLIS 22 + +K +++G G GK+ + Sbjct: 32 RELKLLLLGTGESGKSTFIKQ 52 >6D9H-A nrPDB Length = 355 Score = 32.9 bits (74), Expect = 0.086, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 53/184 (28%), Gaps = 32/184 (17%) Query: 29 PSEYVPTVFDNYAVTVMIGG--------EPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLV 80 S+Y+PT D V G + +FD Q + + + Sbjct: 165 QSDYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGAQRSERKKWIHCFEGVTAIIF 224 Query: 81 C-----FSVVSPSSFE----NVKEKWVPEITHHC--PKTPFLLVGTQIDLRDDPSTIEKL 129 C + +V E + K I ++ T +L + DL ++ T L Sbjct: 225 CVALSAYDLVLAEDEEMNRMHASMKLFDSICNNKWFTDTSIILFLNKKDLFEEKITHSPL 284 Query: 130 AKNKQK---PITPETAEKL----------ARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 + + A +D K + + K ++ VFD Sbjct: 285 TICFPEYTGANKYDEAASYIQSKFEDLNKRKDTKEIYTHFTCSTDTKNVQFVFDAVTDVI 344 Query: 177 LEPP 180 ++ Sbjct: 345 IKNN 348 >5FG3-A nrPDB Length = 623 Score = 32.9 bits (74), Expect = 0.086, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 46/133 (34%), Gaps = 27/133 (20%) Query: 6 CVVVGDGAVGKTCLL----------------ISYTTNKF-PSEYVPTVFDNYAVTVMIGG 48 VV+G GKT LL + P++ + + + + + Sbjct: 19 VVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKL 78 Query: 49 EPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVV---SPSSFENVKEKWVPEITHHC 105 L DT G E + LR D ++ ++ P ++E + + + E Sbjct: 79 VIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEAL--ELLKERR--- 133 Query: 106 PKTPFLLVGTQID 118 PFL+ +ID Sbjct: 134 --VPFLIAANKID 144 >3LLU-A nrPDB Length = 196 Score = 32.9 bits (74), Expect = 0.089, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 25/90 (27%), Gaps = 10/90 (11%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGG----EPYTLGLFDTAG 60 + +++G GK+ + +K T+F + ++D G Sbjct: 22 RILLMGLRRSGKSS-IQKVVFHKMSPNE--TLFLESTNKIYKDDISNSSFVNFQIWDFPG 78 Query: 61 QEDYDRLRPLS---YPQTDVFLVCFSVVSP 87 Q D+ + T + Sbjct: 79 QMDFFDPTFDYEMIFRGTGALIYVIDAQDD 108 >2CXX-A nrPDB Length = 190 Score = 32.5 bits (73), Expect = 0.10, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 53/188 (28%), Gaps = 42/188 (22%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG----- 60 + G VGK+ L+ T K P V + I + + + D G Sbjct: 4 IIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVT---RKIIEIEWKNHK--IIDMPGFGFMM 58 Query: 61 ------QEDYDRLRPLSYPQT----DVFLVCFSVVSPSSFENVKEKWVP--EITHHCP-- 106 QE DV ++ V + + ++W EI Sbjct: 59 GLPKEVQERIKDEIVHFIEDNAKNIDVAVLV---VDGKAAPEIIKRWEKRGEIPIDVEFY 115 Query: 107 ------KTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSAL 160 P ++ ++D + + K + +K+ ++ SA Sbjct: 116 QFLRELDIPTIVAVNKLDKIKNVQEVINFLAEK-FEVPLSEIDKV--------FIPISAK 166 Query: 161 TQKGLKNV 168 ++ + Sbjct: 167 FGDNIERL 174 >4WQY-BZ nrPDB Length = 758 Score = 32.1 bits (72), Expect = 0.13, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 4/70 (5%) Query: 49 EPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT 108 + + + + DT G D+ S D +V F S + W + K Sbjct: 142 KDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFD-SSQGVEPQSETVWRQAEKY---KV 197 Query: 109 PFLLVGTQID 118 P + ++D Sbjct: 198 PRIAFANKMD 207 >1ZUN-B nrPDB Length = 434 Score = 32.1 bits (72), Expect = 0.14, Method: Composition-based stats. Identities = 25/194 (12%), Positives = 57/194 (29%), Gaps = 39/194 (20%) Query: 4 IKCVVVGDGAVGKTCLLISYTTN------------KFPSEYVPTVFDNYAVTVMIGGEPY 51 ++ + G+ GK+ L+ + S+ T D+ + +++ G Sbjct: 25 LRFLTCGNVDDGKSTLIGRLLHDSKMIYEDHLEAITRDSKKSGTTGDDVDLALLVDGLQA 84 Query: 52 --------------------TLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFE 91 + DT G E Y R D+ ++ + Sbjct: 85 EREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDLAIILVDARYGVQTQ 144 Query: 92 NVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKA 151 + ++ + + ++DL ++ K + AE +A Sbjct: 145 TRRHSYIASLLGIKHIVVAI---NKMDLN----GFDERVFESIKADYLKFAEGIAFKPTT 197 Query: 152 VKYVECSALTQKGL 165 + +V SAL + Sbjct: 198 MAFVPMSALKGDNV 211 >4V7F-o nrPDB Length = 647 Score = 32.1 bits (72), Expect = 0.14, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 61/194 (31%), Gaps = 27/194 (13%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTV-MIGGEPYTLGLFDTAG---- 60 ++ G VGK+ L T + + P F ++ V + DT G Sbjct: 170 LLICGYPNVGKSSFLRCITKS--DVDVQPYAFTTKSLYVGHFDYKYLRFQAIDTPGILDR 227 Query: 61 -QEDYDRLR-PLSYPQTD---VFLVCFSVVSPSSFE-NVKEKWVPEITHHCPKTPFLLVG 114 E+ + + Y L + F + K I ++V Sbjct: 228 PTEEMNNIEMQSIYAIAHLRSCVLYFMDLSEQCGFTIEAQVKLFHSIKPLFANKSVMVVI 287 Query: 115 TQIDLRDDPSTIEKLAKNKQKPITPETAEKL--ARDLKAVKYVECSALTQKGLKNVFDEA 172 + D+ + + + E A+ L +++ V+ + S ++ + V ++A Sbjct: 288 NKTDII------------RPEDLDEERAQLLESVKEVPGVEIMTSSCQLEENVMEVRNKA 335 Query: 173 ILAALEPPEPKKSR 186 L K + Sbjct: 336 CEKLLASRIENKLK 349 >6OIK-A nrPDB Length = 354 Score = 32.1 bits (72), Expect = 0.15, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 49/191 (25%), Gaps = 35/191 (18%) Query: 31 EYVPTVFDNYAVTVMIGG--------EPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVC- 81 +Y PT D V G + LFD GQ + + + C Sbjct: 167 DYQPTEQDILRTRVKTTGIVETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCV 226 Query: 82 ----FS-VVSPSSFENVKEKWVPEITHHCP-----KTPFLLVGTQIDLRDDPSTIEKLAK 131 + V+ N + + C T +L + DL + L Sbjct: 227 ALSGYDQVLHEDETTNRMHESLMLFDSICNNKFFIDTSIILFLNKKDLFGEKIKKSPLTI 286 Query: 132 NKQK---PITPETAEKLA--------RDLKAVKYVE-CSALTQKGLKNVFDEAILAALEP 179 + P T E A R Y A ++ VFD + Sbjct: 287 CFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCHMTCATDTNNIQVVFDAVTDIIIAN 346 Query: 180 PEPKKSRRCVL 190 R C L Sbjct: 347 NL----RGCGL 353 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 18/93 (19%) Query: 2 QTIKCVVVGDGAVGKTCLLISYT---TNKF----PSEYVPTVFDNYAVTVMIGGEPYTLG 54 + +K +++G G GK+ ++ + F +Y P V+ N I + Sbjct: 32 KDVKLLLLGAGESGKSTIVKQMKIIHEDGFSGEDVKQYKPVVYSN-----TIQSLAAIVR 86 Query: 55 LFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSP 87 DT G E D+ R D +VC VVS Sbjct: 87 AMDTLGIEYGDKERK-----ADAKMVC-DVVSR 113 >4YMS-J nrPDB Length = 240 Score = 32.1 bits (72), Expect = 0.16, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 48/164 (29%), Gaps = 19/164 (11%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65 V++G GK+ LL PT + + V I + Sbjct: 30 VVIIGPSGSGKSTLLRC-----INLLEEPTKGEVFIDGVKINNGKVNIN----------- 73 Query: 66 RLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPST 125 ++R F + + + + K + L+ ++ L D Sbjct: 74 KVRQKVGMVFQHFNLFPHLTAIENITLAPVKVKKMNKKEAEELAVDLLA-KVGLLDKKDQ 132 Query: 126 IEKLAKNKQKPITPETAEKLARDLKAVKYVE-CSALTQKGLKNV 168 QK A LA + + + E SAL + +K V Sbjct: 133 YPIKLSGGQKQ-RLAIARALAMQPEVMLFDEPTSALDPEMVKEV 175 >1TAG-A nrPDB Length = 324 Score = 32.1 bits (72), Expect = 0.17, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 53/184 (28%), Gaps = 34/184 (18%) Query: 30 SEYVPTVFDNYAVTVMIGG--------EPYTLGLFDTAGQEDYDRLRPLSYPQTDV--FL 79 YVPT D V G + +FD GQ + + F+ Sbjct: 135 PGYVPTEQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTCIIFI 194 Query: 80 VCFSVVSPSSFENVKEKWVPEITH---------HCPKTPFLLVGTQIDLRDDPSTIEKLA 130 S E+ + + E H + T +L + D+ + L+ Sbjct: 195 AALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTSIVLFLNKKDVFSEKIKKAHLS 254 Query: 131 KNKQKPITPETAEKLARDLKAVKYVE--------------CSALTQKGLKNVFDEAILAA 176 P T E A + V+++E A + +K VFD Sbjct: 255 ICFPDYNGPNTYED-AGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVTDII 313 Query: 177 LEPP 180 ++ Sbjct: 314 IKEN 317 Score = 28.3 bits (62), Expect = 2.0, Method: Composition-based stats. Identities = 6/21 (28%), Positives = 14/21 (66%) Query: 2 QTIKCVVVGDGAVGKTCLLIS 22 +T+K +++G G GK+ ++ Sbjct: 2 RTVKLLLLGAGESGKSTIVKQ 22 >3K53-A nrPDB Length = 271 Score = 31.8 bits (71), Expect = 0.19, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 47/169 (27%), Gaps = 24/169 (14%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65 +VG+ VGKT + + T + P V +M + D G Sbjct: 6 VALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIM-EYREKEFLVVDLPGIYSLT 64 Query: 66 R------LRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDL 119 + + ++ +V + + +LV + DL Sbjct: 65 AHSIDELIARNFILDGNADVIV-DIVDSTCLMRNLFLTLELFEMEVKN--IILVLNKFDL 121 Query: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNV 168 + K +++ V + +A +G++ + Sbjct: 122 LKKKGAKIDIKKMRKE--------------LGVPVIPTNAKKGEGVEEL 156 >4U00-A nrPDB Length = 244 Score = 31.8 bits (71), Expect = 0.19, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 10/48 (20%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYT 52 K V++G GK+ L+ + + D V++ G Sbjct: 32 KLVIIGPSGSGKSTLI----------RTINRLEDFQEGEVVVDGLSVK 69 >4KV9-A nrPDB Length = 412 Score = 31.4 bits (70), Expect = 0.23, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 3/55 (5%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKF---PSEYVPTVFDNYAVTVMIGGEPYTLGL 55 + VG+ +GK+ LL + KF PS + T AVT + L L Sbjct: 42 FNILCVGETGIGKSTLLETLFNQKFDFSPSTHDLTDPKLKAVTYDLKEANVKLKL 96 >6CES-C nrPDB Length = 399 Score = 31.4 bits (70), Expect = 0.27, Method: Composition-based stats. Identities = 20/188 (10%), Positives = 52/188 (27%), Gaps = 24/188 (12%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGG----EPYTLGLFDTAG 60 + +++G GK + +K T+F + ++D G Sbjct: 63 RILLMGLRRSGKNS-IQKVVFHKMSPNE--TLFLESTNKIYKDDISNSSFVNFQIWDFPG 119 Query: 61 QEDYDRLRPLS---YPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGT-- 115 Q D+ + T + + + + + + ++ P + Sbjct: 120 QMDFFDPTFDYEMIFRGTGA--LIYVIDAQDDYMEALTRLHITVSKAYKVNPDM---NFE 174 Query: 116 ----QIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDE 171 ++D D IE Q+ L + + + S + + F + Sbjct: 175 VFIHKVDGLSDDHKIETQRDIHQRANDDLADAGL--EKLHLSFYLTS-IYDHSIFEAFSK 231 Query: 172 AILAALEP 179 + + Sbjct: 232 VVQKLIPQ 239 >1PUJ-A nrPDB Length = 282 Score = 31.4 bits (70), Expect = 0.27, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 3/59 (5%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 + I+ +++G VGK+ L+ V +G E L L DT G Sbjct: 119 RAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKE---LELLDTPG 174 >2QTH-A nrPDB Length = 364 Score = 31.0 bits (69), Expect = 0.29, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 55/178 (30%), Gaps = 34/178 (19%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT---VMIGGEPYTLGLFDTAGQE 62 +VG GKT L S T + +F + + I L DT G Sbjct: 182 IGIVGYTNSGKTSLFNSLTGLT--QKVDTKLFTTMSPKRYAIPINNRKIML--VDTVGFI 237 Query: 63 D----------YDRLRPLSYPQTDVFLVCFSVVSPSSF--ENVKEKWVPEITHHCPKTPF 110 + L Y +D ++ + E ++ + P Sbjct: 238 RGIPPQIVDAFFVTLSEAKY--SDALILVIDSTFSENLLIETLQSSFEILREIGVSGKPI 295 Query: 111 LLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKY--VECSALTQKGLK 166 L+ +ID + + EKL+++L + + + SAL + L+ Sbjct: 296 LVTLNKIDKINGDLYKKLDLV-----------EKLSKELYSPIFDVIPISALKRTNLE 342 >1LNZ-A nrPDB Length = 342 Score = 31.0 bits (69), Expect = 0.30, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 63/182 (34%), Gaps = 32/182 (17%) Query: 6 CVVVGDGAVGKTCLL--ISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFD----TA 59 +VG +VGK+ LL +S K + T+ N + G + + D Sbjct: 161 VGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPNLGMVETDDGRSFVMA--DLPGLIE 218 Query: 60 GQEDYDRLRPLSYPQ---TDVFLVCFSVVS---PSSFEN--VKEKWVPEITHHCPKTPFL 111 G L T V + + +++ + + E + P + Sbjct: 219 GAHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYDDYLTINQELSEYNLRLTERPQI 278 Query: 112 LVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKN-VFD 170 +V ++D+ + +E EKL D SA+T++GL+ +F+ Sbjct: 279 IVANKMDMPEAAENLEAFK------------EKLTDDYPVFP---ISAVTREGLRELLFE 323 Query: 171 EA 172 A Sbjct: 324 VA 325 >2Q3F-A nrPDB Length = 181 Score = 31.0 bits (69), Expect = 0.32, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 25/90 (27%), Gaps = 10/90 (11%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGG----EPYTLGLFDTAG 60 + +++G GK+ + +K T+F + ++D G Sbjct: 6 RILLMGLRRSGKSS-IQKVVFHKMSPNE--TLFLESTNKICREDVSNSSFVNFQIWDFPG 62 Query: 61 QEDYDRLRPLS---YPQTDVFLVCFSVVSP 87 Q D+ + T + Sbjct: 63 QIDFFDPTFDYEMIFRGTGALIFVIDSQDD 92 >4V8Y-CP nrPDB Length = 339 Score = 31.0 bits (69), Expect = 0.34, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 68/205 (33%), Gaps = 52/205 (25%) Query: 6 CVVVGDGAVGKTCLLIS------------YTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL 53 C ++G GKT LL T + + Y P VM E T Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 54 GL-----FDTAGQEDYDRLRPLSYPQTDVFLVCFSVV---SPSSFENVKEKWVPEITHHC 105 + DT G E + LR ++ ++ ++ + E++ K + + Sbjct: 68 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRK--- 122 Query: 106 PKTPFLLVGTQIDLRDDPSTIEKLA-----KNKQKPITPE-TAE------KLARD-LKAV 152 PF++ +ID D I + + + + E + +LA L + Sbjct: 123 --APFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNSE 180 Query: 153 KYVE------------CSALTQKGL 165 Y + SA+T +G+ Sbjct: 181 LYFQNKNMSKYVSIVPTSAVTGEGV 205 >6OIJ-A nrPDB Length = 353 Score = 31.0 bits (69), Expect = 0.36, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 53/179 (29%), Gaps = 32/179 (17%) Query: 32 YVPTVFDNYAVTVMIGG--------EPYTLGLFDTAGQ--EDYDRLRPLSYPQTDVFLVC 81 Y+PT D V V G E + D GQ E + + +FLV Sbjct: 166 YLPTQQDVLRVRVPTTGIIEYPFDLENIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVA 225 Query: 82 FSVVSPSSFENVKEKWVPEITH---------HCPKTPFLLVGTQIDLRDDPSTIEKLAKN 132 S E+ E + E + +L + DL +D L Sbjct: 226 LSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEDKILYSHLVDY 285 Query: 133 KQKPITPETAEKLARDLKAVKYVE-------------CSALTQKGLKNVFDEAILAALE 178 + P+ + AR+ +V+ A + ++ VF L+ Sbjct: 286 FPEFDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQ 344 Score = 27.9 bits (61), Expect = 2.5, Method: Composition-based stats. Identities = 5/21 (23%), Positives = 12/21 (57%) Query: 2 QTIKCVVVGDGAVGKTCLLIS 22 + +K +++G G GK+ + Sbjct: 32 RELKLLLLGTGESGKSTFIKQ 52 >2YYZ-A nrPDB Length = 359 Score = 30.6 bits (68), Expect = 0.37, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 5/45 (11%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEP 50 ++G GKT L+ Y PT + Y V++ P Sbjct: 32 VALLGPSGCGKTTTLLMLAG-----IYKPTSGEIYFDDVLVNDIP 71 >1WDT-A nrPDB Length = 665 Score = 30.6 bits (68), Expect = 0.39, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 65/241 (26%), Gaps = 65/241 (26%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDN------------YAVTVMIGGEPYTL 53 +VG GKT L + E V + + TV G P Sbjct: 12 VALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEAKLHRTTVRTGVAPLLF 71 Query: 54 G-----LFDTAGQEDYDRLRPLSYPQTDVFLVCFS------------------------- 83 L D G D+ + D LV S Sbjct: 72 RGHRVFLLDAPGYGDFVGEIRGALEAADAALVAVSAEAGVQVGTERAWTVAERLGLPRMV 131 Query: 84 -VVSPSSFENVKEKWVPEITHHCPKTPFLL--------VGTQIDLRDDPSTIEKLAKNKQ 134 V + + P P L VG ID+ + + + ++ Sbjct: 132 VVTKLDKGGDYYALLEDLRSTLGPILPIDLPLYEGGKWVGL-IDVFHGKAYRYENGEERE 190 Query: 135 KPITPET---AEKLARDLKAV----------KYVECSALTQKGLKNVFDEAILAALEPPE 181 + PE ++ +++ KY+E +T + L+ F EA+ L P Sbjct: 191 AEVPPEERERVQRFRQEVLEAIVETDEGLLEKYLEGEEVTGEALEKAFHEAVRRGLLYPV 250 Query: 182 P 182 Sbjct: 251 A 251 >2YV5-A nrPDB Length = 302 Score = 30.6 bits (68), Expect = 0.41, Method: Composition-based stats. Identities = 8/34 (23%), Positives = 17/34 (50%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVP 34 ++ C++ G VGK+ +L T + ++ V Sbjct: 163 LEGFICILAGPSGVGKSSILSRLTGEELRTQEVS 196 >5OCH-A nrPDB Length = 612 Score = 30.6 bits (68), Expect = 0.44, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 16/50 (32%), Gaps = 16/50 (32%) Query: 6 CVVVGDGAVGKT---CLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYT 52 +VG GKT LL + Y PT VM+ G Sbjct: 394 VALVGQSGGGKTTVASLLERF--------YDPTAGV-----VMLDGRDLR 430 >5X4B-A nrPDB Length = 162 Score = 30.6 bits (68), Expect = 0.45, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 48/157 (30%), Gaps = 11/157 (7%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65 +VG VGK+ + + + Y L DT G + D Sbjct: 5 VAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGIDIGD 64 Query: 66 RLRPLSYPQT------DVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQID- 118 Q + ++ F V E+ V +I + K P +L ++D Sbjct: 65 EPFLAQIRQQAEIAMDEADVIIFMVNGREGVTAADEE-VAKILYRTKK-PVVLAVNKLDN 122 Query: 119 --LRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVK 153 +R + L + PI+ L L AV Sbjct: 123 TEMRANIYDFYSLGFGEPYPISGTHGLGLGDLLDAVA 159 >2RGK-A nrPDB Length = 421 Score = 30.6 bits (68), Expect = 0.45, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 17/56 (30%), Gaps = 10/56 (17%) Query: 53 LGLFDTA--GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP 106 L +D A E+Y + + FL+ + V KW+ Sbjct: 155 LESWDEAFSKTEEYRG-GNANMHAVEAFLIVYDVTHDK-------KWLDRAIRVAS 202 >2GZA-A nrPDB Length = 361 Score = 30.6 bits (68), Expect = 0.45, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 2/34 (5%) Query: 6 CVVVGDGAVGKTCLLISYTTNK-FPSEYVPTVFD 38 VV G+ GKT L+ + F + T+ D Sbjct: 178 IVVAGETGSGKTTLMKALMQEIPFDQRLI-TIED 210 >4V8Z-CV nrPDB Length = 586 Score = 30.6 bits (68), Expect = 0.48, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 68/205 (33%), Gaps = 52/205 (25%) Query: 6 CVVVGDGAVGKTCLLIS------------YTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL 53 C ++G GKT LL T + + Y P VM E T Sbjct: 8 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 67 Query: 54 GL-----FDTAGQEDYDRLRPLSYPQTDVFLVCFSVV---SPSSFENVKEKWVPEITHHC 105 + DT G E + LR ++ ++ ++ + E++ K + + Sbjct: 68 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRK--- 122 Query: 106 PKTPFLLVGTQIDLRDDPSTIEKLA-----KNKQKPITPE-TAE------KLARD-LKAV 152 PF++ +ID D I + + + + E + +LA L + Sbjct: 123 --APFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNSE 180 Query: 153 KYVE------------CSALTQKGL 165 Y + SA+T +G+ Sbjct: 181 LYFQNKNMSKYVSIVPTSAVTGEGV 205 >4NCF-A nrPDB Length = 457 Score = 30.6 bits (68), Expect = 0.48, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 68/205 (33%), Gaps = 52/205 (25%) Query: 6 CVVVGDGAVGKTCLLIS------------YTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL 53 C ++G GKT LL T + + Y P VM E T Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 72 Query: 54 GL-----FDTAGQEDYDRLRPLSYPQTDVFLVCFSVV---SPSSFENVKEKWVPEITHHC 105 + DT G E + LR ++ ++ ++ + E++ K + + Sbjct: 73 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRK--- 127 Query: 106 PKTPFLLVGTQIDLRDDPSTIEKLA-----KNKQKPITPE-TAE------KLARD-LKAV 152 PF++ +ID D I + + + + E + +LA L + Sbjct: 128 --APFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNSE 185 Query: 153 KYVE------------CSALTQKGL 165 Y + SA+T +G+ Sbjct: 186 LYFQNKNMSKYVSIVPTSAVTGEGV 210 >6HZK-A nrPDB Length = 333 Score = 30.6 bits (68), Expect = 0.48, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 5/40 (12%) Query: 5 KCVVVG---DGAVGKTCLLISYTTNKFPSEYVPTV-FDNY 40 + V++G D GK+ L + F +E + + D+Y Sbjct: 6 RVVLIGVAGDSGCGKSTFLNRLA-DLFGTELMTVICLDDY 44 >3WBI-A nrPDB Length = 606 Score = 30.2 bits (67), Expect = 0.50, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 68/205 (33%), Gaps = 52/205 (25%) Query: 6 CVVVGDGAVGKTCLLIS------------YTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL 53 C ++G GKT LL T + + Y P VM E T Sbjct: 12 CCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTF 71 Query: 54 GL-----FDTAGQEDYDRLRPLSYPQTDVFLVCFSVV---SPSSFENVKEKWVPEITHHC 105 + DT G E + LR ++ ++ ++ + E++ K + + Sbjct: 72 DVPGLLVIDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESI--KLLRDRK--- 126 Query: 106 PKTPFLLVGTQIDLRDDPSTIEKLA-----KNKQKPITPE-TAE------KLARD-LKAV 152 PF++ +ID D I + + + + E + +LA L + Sbjct: 127 --APFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAEQGLNSE 184 Query: 153 KYVE------------CSALTQKGL 165 Y + SA+T +G+ Sbjct: 185 LYFQNKNMSKYVSIVPTSAVTGEGV 209 >2ZBL-A nrPDB Length = 421 Score = 30.2 bits (67), Expect = 0.52, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 17/55 (30%), Gaps = 8/55 (14%) Query: 53 LGLFDTA-GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP 106 L +D A Q + R + + FL+ + V KW+ Sbjct: 155 LESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDK-------KWLDRALRIAS 202 >3DEF-A nrPDB Length = 262 Score = 30.2 bits (67), Expect = 0.57, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 15/27 (55%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNK 27 M ++ +V+G G VGK+ + S + Sbjct: 34 MNSMTVLVLGKGGVGKSSTVNSLIGEQ 60 >1H65-A nrPDB Length = 270 Score = 30.2 bits (67), Expect = 0.57, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 32/80 (40%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 + ++ +V+G G VGK+ + S + S V V +TL + DT G Sbjct: 37 VNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPG 96 Query: 61 QEDYDRLRPLSYPQTDVFLV 80 + + ++ FL+ Sbjct: 97 LIEGGYINDMALNIIKSFLL 116 >4CSU-9 nrPDB Length = 390 Score = 30.2 bits (67), Expect = 0.60, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 22/103 (21%) Query: 98 VPEITHHCPKT---PFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLK-AVK 153 + E+ + P LV +IDL D E A+ +A L K Sbjct: 263 ISELEKYSQDLATKPRWLVFNKIDLLDKVEA-------------EEKAKAIAEALGWEDK 309 Query: 154 YVECSALTQKGLKNVFDEAILAALEPP-----EPKKSRRCVLL 191 Y SA + G+K++ + + +E P E K+ + + Sbjct: 310 YYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFM 352 >4UJC-AB nrPDB Length = 627 Score = 30.2 bits (67), Expect = 0.63, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 73/231 (31%), Gaps = 53/231 (22%) Query: 6 CVVVGDGAVGKTCLL----ISYTTNKFPSEYVPTVFDNY-------AVTVMI---GGEPY 51 V+G GKT +L ++ + + T MI E Sbjct: 41 ICVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKNFDRENV 100 Query: 52 T---LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVV---SPSSFENVKEKWVPEITHHC 105 + + DT G E + LR D+ ++ ++ P + E++ Sbjct: 101 RIPGMLIIDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESIN-------LLKS 153 Query: 106 PKTPFLLVGTQI----DLRDDPSTIEKLAKNKQKPITPETAEKLARDL---------KAV 152 K PF++ +I D + P + KQK T + E+ A+ + A Sbjct: 154 KKCPFIVALNKIDRLYDWKKSPDSDVAATLKKQKKNTKDEFEERAKAIIVEFAQQGLNAA 213 Query: 153 KYVE------------CSALTQKGLKNVFDEAILAALEPPEPKKSRRCVLL 191 + E SA T G+ ++ + + K+ C L Sbjct: 214 LFYENKDPRTFVSLVPTSAHTGDGMGSLIYLLV-ELTQTMLSKRLAHCEEL 263 >4MRS-A nrPDB Length = 614 Score = 29.8 bits (66), Expect = 0.65, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 18/50 (36%), Gaps = 16/50 (32%) Query: 5 KCVVVGDGAVGKTC---LLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPY 51 + +VG GK+ LL + Y P + ++I G+ Sbjct: 389 RVAIVGPSGAGKSTIARLLFRF--------YDP-----WEGRILIDGQDI 425 >6F1T-i nrPDB Length = 492 Score = 29.8 bits (66), Expect = 0.66, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 26/90 (28%), Gaps = 2/90 (2%) Query: 84 VVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAE 143 + S S ENV + H P L+V T+ D I Sbjct: 201 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHL-R 259 Query: 144 KLARDLKAVKYVECSALTQKGLKNVFDEAI 173 + A + S +K L ++ + Sbjct: 260 RFCLQYGAAL-IYTSVKEEKNLDLLYKYIV 288 Score = 27.9 bits (61), Expect = 3.0, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 48/164 (29%), Gaps = 14/164 (8%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65 +V G+ GKT L+ + + + +V + ++ G + Sbjct: 57 ILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHK 116 Query: 66 RLRPLSYPQTD----VFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 L + + + + P + +KW + H K +I Sbjct: 117 GLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKM-------KIPPEK 169 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGL 165 K K+ Q + PE + + + S ++ + Sbjct: 170 MRELERKFVKDFQDYMEPEEGCQGSPQRRGPL---TSGSDEENV 210 >1ZCA-A nrPDB Length = 359 Score = 29.8 bits (66), Expect = 0.69, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 10/63 (15%) Query: 2 QTIKCVVVGDGAVGKTCLLISYT---TNKFPS----EYVPTVFDNYAV--TVMIGGEPYT 52 + +K +++G G GK+ L +F E+ T+FDN V++ Sbjct: 34 RLVKILLLGAGESGKSTFLKQMRIIHGREFDQKALLEFRDTIFDNILKGSRVLVDARD-K 92 Query: 53 LGL 55 LG+ Sbjct: 93 LGI 95 >1YE8-A nrPDB Length = 178 Score = 29.8 bits (66), Expect = 0.70, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 12/22 (54%) Query: 4 IKCVVVGDGAVGKTCLLISYTT 25 +K ++ G+ VGKT L+ Sbjct: 1 MKIIITGEPGVGKTTLVKKIVE 22 >5M04-A nrPDB Length = 360 Score = 29.8 bits (66), Expect = 0.76, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 17/87 (19%) Query: 98 VPEITHHCPKT---PFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLK-AVK 153 + E+ + P LV +IDL D E A+ +A L K Sbjct: 283 ISELEKYSQDLATKPRWLVFNKIDLLDKVEA-------------EEKAKAIAEALGWEDK 329 Query: 154 YVECSALTQKGLKNVFDEAILAALEPP 180 Y SA + G+K++ + + +E P Sbjct: 330 YYLISAASGLGVKDLCWDVMTFIIENP 356 >2P8Y-T nrPDB Length = 842 Score = 29.8 bits (66), Expect = 0.78, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 37/108 (34%), Gaps = 12/108 (11%) Query: 37 FDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSP---SSFENV 93 D + G + + L D+ G D+ + TD LV + + + Sbjct: 84 EDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVL 143 Query: 94 KEKWVPEITHHCPKTPFLLVGTQID--LRDDPSTIEKLAKNKQKPITP 139 ++ I P +++ ++D L + + E L + + + Sbjct: 144 RQALGERIK------PVVVI-NKVDRALLELQVSKEDLYQTFARTVES 184 >1YR7-A nrPDB Length = 262 Score = 29.8 bits (66), Expect = 0.82, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 3/36 (8%) Query: 1 MQTIKCVVVGDGAVGKTCLL---ISYTTNKFPSEYV 33 M ++ V VG GKT L Y + + YV Sbjct: 12 MASMIVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYV 47 >4TLD-A nrPDB Length = 253 Score = 29.5 bits (65), Expect = 0.84, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 14/37 (37%) Query: 7 VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT 43 +V G GKT I + N P VF + T Sbjct: 43 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEET 79 >4MYH-A nrPDB Length = 598 Score = 29.5 bits (65), Expect = 0.89, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 16/51 (31%), Gaps = 16/51 (31%) Query: 5 KCVVVGDGAVGKTC---LLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYT 52 K +VG GK+ L+ + Y P ++I G Sbjct: 367 KTAIVGSSGSGKSTILKLVFRF--------YDPESG-----RILINGRDIK 404 >3A1W-A nrPDB Length = 168 Score = 29.5 bits (65), Expect = 0.89, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 64/185 (34%), Gaps = 31/185 (16%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYT-TNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 + +K + G VGKT L + T T ++ + + + G YT+ L D Sbjct: 3 LHMVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKG--YTINLIDLP 60 Query: 60 GQED--YDRLRPLSYP------QTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL 111 G Y + D+ ++ V+P + + + + Sbjct: 61 GTYSLGYSSIDEKIARDYLLKGDADLVILVADSVNPEQSLYLLLEILEMEKK------VI 114 Query: 112 LVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDE 171 L T ID + T K+ + + + + V S++T +GL+ + ++ Sbjct: 115 LAMTAID--EAKKTGMKIDRYEL------------QKHLGIPVVFTSSVTGEGLEELKEK 160 Query: 172 AILAA 176 + A Sbjct: 161 IVEYA 165 >1ZCB-A nrPDB Length = 362 Score = 29.5 bits (65), Expect = 0.90, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 10/63 (15%) Query: 2 QTIKCVVVGDGAVGKTCLLISY-------TTNKFPSEYVPTVFDNYAV--TVMIGGEPYT 52 + +K +++G G GK+ L + E+ PT++ N V++ Sbjct: 32 RLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVDARE-K 90 Query: 53 LGL 55 L + Sbjct: 91 LHI 93 >1SUL-A nrPDB Length = 195 Score = 29.5 bits (65), Expect = 0.92, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 35/123 (28%), Gaps = 13/123 (10%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG----- 60 + G VGK+ + S K + + I + D G Sbjct: 26 IALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHF--VDVPGYGFAK 83 Query: 61 -----QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGT 115 +E + R+ + +V + + + E + P +++ T Sbjct: 84 VSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYG-IPVIVIAT 142 Query: 116 QID 118 + D Sbjct: 143 KAD 145 >6F1Y-j nrPDB Length = 337 Score = 29.5 bits (65), Expect = 0.93, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 26/90 (28%), Gaps = 2/90 (2%) Query: 84 VVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAE 143 + S S ENV + H P L+V T+ D I Sbjct: 165 LTSGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHL-R 223 Query: 144 KLARDLKAVKYVECSALTQKGLKNVFDEAI 173 + A + S +K L ++ + Sbjct: 224 RFCLQYGAAL-IYTSVKEEKNLDLLYKYIV 252 Score = 27.1 bits (59), Expect = 4.4, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 48/164 (29%), Gaps = 14/164 (8%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65 +V G+ GKT L+ + + + +V + ++ G + Sbjct: 21 ILVFGEDGSGKTTLMTKLQGAEHGKKGRGLEYLYLSVHDEDRDDHTRCNVWILDGDLYHK 80 Query: 66 RLRPLSYPQTD----VFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD 121 L + + + + P + +KW + H K +I Sbjct: 81 GLLKFAVSAESLPETLVIFVADMSRPWTVMESLQKWASVLREHIDKM-------KIPPEK 133 Query: 122 DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGL 165 K K+ Q + PE + + + S ++ + Sbjct: 134 MRELERKFVKDFQDYMEPEEGCQGSPQRRGPL---TSGSDEENV 174 >5C78-A nrPDB Length = 564 Score = 29.5 bits (65), Expect = 0.95, Method: Composition-based stats. Identities = 5/16 (31%), Positives = 9/16 (56%) Query: 5 KCVVVGDGAVGKTCLL 20 K +G+ GK+ L+ Sbjct: 377 KIAFIGESGCGKSTLV 392 >3S1A-A nrPDB Length = 525 Score = 29.5 bits (65), Expect = 0.95, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 14/37 (37%) Query: 7 VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT 43 +V G GKT I + N P VF + T Sbjct: 43 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEET 79 >5GM6-Y nrPDB Length = 876 Score = 29.5 bits (65), Expect = 0.96, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 5/49 (10%) Query: 1 MQTIK----CVVVGDGAVGKTCLLISY-TTNKFPSEYVPTVFDNYAVTV 44 +Q IK +++G+ GKT L Y + F + + V Sbjct: 233 LQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRV 281 >4RY2-A nrPDB Length = 730 Score = 29.5 bits (65), Expect = 1.00, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 16/47 (34%), Gaps = 10/47 (21%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYT 52 +VG+ GKT L + Y P D ++I G Sbjct: 518 VAIVGESGSGKTTLAKLLM-----NFYSPEKGD-----ILINGHSIK 554 >6I3O-A nrPDB Length = 677 Score = 29.5 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 4/36 (11%) Query: 1 MQTIK----CVVVGDGAVGKTCLLISYTTNKFPSEY 32 +Q +K +VVG+ GKT + Y ++Y Sbjct: 22 IQAVKDNQILIVVGETGSGKTTQVTQYLAEAGFTKY 57 >2GA8-A nrPDB Length = 359 Score = 29.5 bits (65), Expect = 1.0, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 18/48 (37%), Gaps = 6/48 (12%) Query: 6 CVVVGDGAVGKTCLLISYTT------NKFPSEYVPTVFDNYAVTVMIG 47 ++VG GK+ + + F SE+ + N + M+ Sbjct: 27 VILVGSPGSGKSTIAEELCQIINEKYHTFLSEHPNVIEVNDRLKPMVN 74 >1IRQ-A nrPDB Length = 71 Score = 29.1 bits (64), Expect = 1.1, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 4/74 (5%) Query: 111 LLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFD 170 ++VG L + + +K I + ++ DL + +E A +K V D Sbjct: 1 MIVGN---LGAQKAKRNDTPISAKKDIMGDKTVRVRADLHHIIKIET-AKNGGNVKEVMD 56 Query: 171 EAILAALEPPEPKK 184 +A+ + P K Sbjct: 57 QALEEYIRKYLPDK 70 >4V89-AW nrPDB Length = 534 Score = 29.1 bits (64), Expect = 1.1, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 4/70 (5%) Query: 49 EPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT 108 + L DT G ED+ + D L+ + + E+ K + T Sbjct: 80 HDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMV--IDAAKGVEDRTRKLMEVTRLR--DT 135 Query: 109 PFLLVGTQID 118 P L ++D Sbjct: 136 PILTFMNKLD 145 >6N0I-A nrPDB Length = 706 Score = 29.1 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 4/70 (5%) Query: 49 EPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT 108 Y + DT G D+ S D +V FS ++ + W +H P+ Sbjct: 84 HKYRFNIIDTPGHVDFTIEVERSLRVLDGAVVVFSGADGVEPQS-ETVWRQANKYHVPRL 142 Query: 109 PFLLVGTQID 118 ++ ++D Sbjct: 143 AYI---NKMD 149 >2WIC-A nrPDB Length = 267 Score = 29.1 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 12/25 (48%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTT 25 MQ + ++G+ GKT L T Sbjct: 1 MQKLTVGLIGNPNSGKTTLFNQLTG 25 >5H7J-A nrPDB Length = 743 Score = 29.1 bits (64), Expect = 1.3, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 12/96 (12%) Query: 47 GGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVS---PSSFENVKEKWVPEITH 103 G+ Y + L DT G D+ + D ++ V P + V++ + Sbjct: 87 EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVK- 145 Query: 104 HCPKTPFLLVGTQID--LRDDPSTIEKLAKNKQKPI 137 P L + ++D +R+ T +++ + K I Sbjct: 146 -----PVLFI-NKVDRLIRELKLTPQQMMERFSKII 175 >3A1U-A nrPDB Length = 258 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 65/188 (34%), Gaps = 31/188 (16%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYT-TNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 + +K + G VGKT L + T T ++ + + + G YT+ L D Sbjct: 3 LHMVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKG--YTINLIDLP 60 Query: 60 GQED--YDRLRPLSYP------QTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL 111 G Y + D+ ++ V+P + + + + Sbjct: 61 GTYSLGYSSIDEKIARDYLLKGDADLVILVADSVNPEQSLYLLLEILEMEKK------VI 114 Query: 112 LVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDE 171 L T ID + T K+ + + + + V S++T +GL+ + ++ Sbjct: 115 LAMTAID--EAKKTGMKIDRYEL------------QKHLGIPVVFTSSVTGEGLEELKEK 160 Query: 172 AILAALEP 179 + A + Sbjct: 161 IVEYAQKN 168 >1IHU-A nrPDB Length = 589 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 5/54 (9%) Query: 6 CVVVGDGAVGKTCL----LISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGL 55 +++G G VGKT + + F ++ T +++ + G L + Sbjct: 330 IMLMGKGGVGKTTMAAAIAVRLADMGFD-VHLTTSDPAAHLSMTLNGSLNNLQV 382 >2P5T-B nrPDB Length = 253 Score = 28.7 bits (63), Expect = 1.4, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 26/163 (15%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 61 Q I ++ G GKT + +F V D++ P+ L L Q Sbjct: 31 QPIAILLGGQSGAGKTT-IHRIKQKEFQGNIVIIDGDSFRSQ-----HPHYLEL-----Q 79 Query: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSF------------ENVKEKWVPEITHHCPKTP 109 ++Y + +V V SS +V +K + + + Sbjct: 80 QEYGKDSVEYTKDFAGKMVESLVTKLSSLGYNLLIEGTLRTVDVPKKTAQLLKNKGYEVQ 139 Query: 110 FLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAV 152 L+ T+ +L + + I P A ++ Sbjct: 140 LALIATKPELS---YLSTLIRYEELYIINPNQARATPKEHHDF 179 >5H7K-A nrPDB Length = 397 Score = 28.7 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 12/96 (12%) Query: 47 GGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVS---PSSFENVKEKWVPEITH 103 G+ Y + L DT G D+ + D ++ V P + V++ + Sbjct: 87 EGKDYLINLIDTPGHVDFGGDVTRAMRAIDGVIIVVDAVEGVMPQTETVVRQALREYVK- 145 Query: 104 HCPKTPFLLVGTQID--LRDDPSTIEKLAKNKQKPI 137 P L + ++D +R+ T +++ + K I Sbjct: 146 -----PVLFI-NKVDRLIRELKLTPQQMMERFSKII 175 >1G7S-A nrPDB Length = 594 Score = 28.7 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 4/80 (5%) Query: 39 NYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWV 98 ++ I L DT G E + LR D+ ++ + F+ ++ + Sbjct: 58 DFLKKFSIRETLPGLFFIDTPGHEAFTTLRKRGGALADLAILIVDIN--EGFKPQTQEAL 115 Query: 99 PEITHHCPKTPFLLVGTQID 118 + + +TPF++ +ID Sbjct: 116 NILRMY--RTPFVVAANKID 133 >4N1A-A nrPDB Length = 589 Score = 28.7 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 5/42 (11%) Query: 7 VVVGDGAVGKTCLLISYTTNKFPSEYVP----TVFDNYAVTV 44 +V GD GK+ LL T Y P +F +Y+ ++ Sbjct: 387 LVFGDTECGKSNLL-RLITAGIIERYTPQQARLIFIDYSRSL 427 >3GD7-A nrPDB Length = 390 Score = 28.3 bits (62), Expect = 1.9, Method: Composition-based stats. Identities = 5/20 (25%), Positives = 11/20 (55%) Query: 5 KCVVVGDGAVGKTCLLISYT 24 + ++G GK+ LL ++ Sbjct: 49 RVGLLGRTGSGKSTLLSAFL 68 >5B3F-A nrPDB Length = 343 Score = 28.3 bits (62), Expect = 2.0, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 2/36 (5%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNY 40 V GD GK+ ++ F E V ++ D+Y Sbjct: 40 IGVAGDSGSGKSTFT-RAISDIFGEELVSSITVDDY 74 >3G2F-A nrPDB Length = 336 Score = 28.3 bits (62), Expect = 2.0, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 1/63 (1%) Query: 52 TLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFL 111 L L + G+ Y + S + V + FS + +F N K + + H Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEH-DNIARF 72 Query: 112 LVG 114 +VG Sbjct: 73 IVG 75 >2WJG-A nrPDB Length = 188 Score = 28.3 bits (62), Expect = 2.0, Method: Composition-based stats. Identities = 6/26 (23%), Positives = 15/26 (57%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTN 26 M++ + ++G+ VGK+ + + T Sbjct: 5 MKSYEIALIGNPNVGKSTIFNALTGE 30 >2PJZ-A nrPDB Length = 263 Score = 28.3 bits (62), Expect = 2.0, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 17/61 (27%) Query: 5 KCVVVGDGAVGKTCLLIS------YTTNKFPS-----------EYVPTVFDNYAVTVMIG 47 K +++G GKT LL + Y+ N F + Y + + Y + V + Sbjct: 32 KVIILGPNGSGKTTLLRAISGLLPYSGNIFINGMEVRKIRNYIRYSTNLPEAYEIGVTVN 91 Query: 48 G 48 Sbjct: 92 D 92 >3D0O-A nrPDB Length = 317 Score = 28.3 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 10/53 (18%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFD 57 K V++G+GAVG + S E V + + E + D Sbjct: 8 KVVLIGNGAVG-SSYAFSLVNQSIVDE---------LVIIDLDTEKVRGDVMD 50 >2QAG-B nrPDB Length = 427 Score = 28.3 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 14/28 (50%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSE 31 + VG+ +GK+ L+ + KF E Sbjct: 43 FNILCVGETGLGKSTLMDTLFNTKFEGE 70 >2WJI-A nrPDB Length = 165 Score = 28.3 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 6/26 (23%), Positives = 15/26 (57%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTN 26 M++ + ++G+ VGK+ + + T Sbjct: 1 MKSYEIALIGNPNVGKSTIFNALTGE 26 >5IDV-A nrPDB Length = 279 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 7/25 (28%), Positives = 10/25 (40%), Gaps = 2/25 (8%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPS 30 +VG GKT L+ +F Sbjct: 68 VALVGRSGAGKTSLVNMLV--RFQE 90 >5AR1-A nrPDB Length = 303 Score = 28.3 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 11/71 (15%), Positives = 20/71 (28%), Gaps = 13/71 (18%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEY--------VPTVFDNYAVTVMI-----GGE 49 T ++VG G++ + + + T D + G Sbjct: 27 TFTVMIVGQSGSGRSTFINTLCGQQVVDTSTTILLPTDTSTEIDLQLREETVELEDDEGV 86 Query: 50 PYTLGLFDTAG 60 L + DT G Sbjct: 87 KIQLNIIDTPG 97 >4Z54-A nrPDB Length = 287 Score = 28.3 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 10/67 (14%) Query: 4 IKCVVVGDGAVGKTCLLISYTTNKFP--------SEYVP-TVFD-NYAVTVMIGGEPYTL 53 +VVG +GK+ L+ + ++ E +P TV + GG L Sbjct: 20 FNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIEEGGVKMKL 79 Query: 54 GLFDTAG 60 + DT G Sbjct: 80 TVIDTPG 86 >5MRE-WW nrPDB Length = 401 Score = 28.3 bits (62), Expect = 2.3, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 11/18 (61%) Query: 5 KCVVVGDGAVGKTCLLIS 22 K ++ G+ VGKT LL Sbjct: 96 KFIITGEPGVGKTVLLSQ 113 >5VHD-D nrPDB Length = 870 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 5/25 (20%), Positives = 11/25 (44%) Query: 7 VVVGDGAVGKTCLLISYTTNKFPSE 31 V+ G+ GKT + + + + Sbjct: 80 VISGETGCGKTTQVTQFILDNYIER 104 >3FVQ-A nrPDB Length = 359 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 6/20 (30%), Positives = 8/20 (40%) Query: 6 CVVVGDGAVGKTCLLISYTT 25 ++G GKT LL Sbjct: 33 LFIIGASGCGKTTLLRCLAG 52 >6BZR-B nrPDB Length = 251 Score = 27.9 bits (61), Expect = 2.5, Method: Composition-based stats. Identities = 6/16 (37%), Positives = 8/16 (50%) Query: 5 KCVVVGDGAVGKTCLL 20 K +VG GK+ L Sbjct: 42 KVGIVGRTGAGKSSLA 57 >5TY0-A nrPDB Length = 422 Score = 27.9 bits (61), Expect = 2.5, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 10/73 (13%) Query: 49 EPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSV---VSPSSFENVKEKWVPEITHHC 105 E + + + DT G D+ S D +V F V P S + W + Sbjct: 81 ESHRINIIDTPGHVDFMIEVERSLRVLDGAVVVFDSVAGVEPQS----ETVWRQANKYGV 136 Query: 106 PKTPFLLVGTQID 118 P+ F+ ++D Sbjct: 137 PRIVFV---NKMD 146 >5ZLU-EE nrPDB Length = 497 Score = 27.9 bits (61), Expect = 2.5, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 10/19 (52%) Query: 5 KCVVVGDGAVGKTCLLISY 23 + +VGD GK+ LL Sbjct: 32 RIGLVGDNGAGKSSLLKVL 50 Score = 26.8 bits (58), Expect = 7.0, Method: Composition-based stats. Identities = 7/17 (41%), Positives = 8/17 (47%) Query: 5 KCVVVGDGAVGKTCLLI 21 K + G GKT LL Sbjct: 324 KVAITGSNGTGKTSLLK 340 >4YPL-A nrPDB Length = 555 Score = 27.9 bits (61), Expect = 2.5, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 9/14 (64%) Query: 6 CVVVGDGAVGKTCL 19 V+VG VGKT L Sbjct: 113 LVLVGPPGVGKTSL 126 >2FGK-A nrPDB Length = 247 Score = 27.9 bits (61), Expect = 2.5, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 17/48 (35%), Gaps = 10/48 (20%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL 53 +VG GK+ L +F Y+P V+I G L Sbjct: 38 IGIVGRSGSGKSTLTK--LIQRF---YIPENG-----QVLIDGHDLAL 75 >6FT6-s nrPDB Length = 520 Score = 27.9 bits (61), Expect = 2.5, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 3/56 (5%) Query: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDL 119 YD++ +DV L P S + + V E +L+ ++DL Sbjct: 165 YDKIFKSVIDASDVILYVLDARDPES---TRSRKVEEAVLQSQGKRLILILNKVDL 217 >3N5F-A nrPDB Length = 408 Score = 27.9 bits (61), Expect = 2.5, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 10/61 (16%) Query: 58 TAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQI 117 TA + L + +F+ +E+ + P +LVG+ + Sbjct: 31 TAEERRAKDLVASYMREAGLFV----------YEDAAGNLIGRKEGTNPDATVVLVGSHL 80 Query: 118 D 118 D Sbjct: 81 D 81 >3L9C-A nrPDB Length = 259 Score = 27.9 bits (61), Expect = 2.5, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 12/104 (11%) Query: 43 TVMIGGEPYTLGLFDTAG--QEDYDRLRPLSYPQTDVFLVCFS--VVSPSSFENVKEKWV 98 + + E Y + D A Q DY SY + FS ++S +FE E + Sbjct: 103 NISLSNEDYLAIIRDIAALYQPDYIDFEYFSYRDVLEEMYDFSNLILSYHNFEETPENLM 162 Query: 99 P---EITHHCPKTPFLLVGTQ-----IDLRDDPSTIEKLAKNKQ 134 E+T P+ + V + +DL + + L N++ Sbjct: 163 EVFSELTALAPRVVKIAVMPKNEQDVLDLMNYTRGFKTLNPNQE 206 >1EZ4-A nrPDB Length = 318 Score = 27.9 bits (61), Expect = 2.6, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 3/28 (10%) Query: 5 KCVVVGDGAVGKT---CLLISYTTNKFP 29 K V+VGDGAVG + + +F Sbjct: 7 KVVLVGDGAVGSSYAFAMAQQGIAEEFV 34 >6G2G-A nrPDB Length = 310 Score = 27.9 bits (61), Expect = 2.6, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 9/19 (47%) Query: 6 CVVVGDGAVGKTCLLISYT 24 V+ G G VGK+ + Sbjct: 11 LVLSGKGGVGKSSVTTQLA 29 >6FA9-A nrPDB Length = 655 Score = 27.9 bits (61), Expect = 2.6, Method: Composition-based stats. Identities = 6/21 (28%), Positives = 10/21 (47%) Query: 6 CVVVGDGAVGKTCLLISYTTN 26 ++VG+ GKT + Y Sbjct: 50 LILVGETGSGKTTQIPQYLHE 70 >5TV2-A nrPDB Length = 405 Score = 27.9 bits (61), Expect = 2.6, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 10/73 (13%) Query: 49 EPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCF---SVVSPSSFENVKEKWVPEITHHC 105 + + + + DT G D+ S D +V F S V P S + W +H Sbjct: 80 QDHRVNIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVEPQS----ETVWRQADKYHV 135 Query: 106 PKTPFLLVGTQID 118 P+ F+ ++D Sbjct: 136 PRMVFV---NKMD 145 >4R98-A nrPDB Length = 271 Score = 27.9 bits (61), Expect = 2.6, Method: Composition-based stats. Identities = 7/27 (25%), Positives = 14/27 (51%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTTNK 27 M+ + ++G+ GKT L T ++ Sbjct: 1 MKKLTIGLIGNPNSGKTTLFNQLTGSR 27 >4HZI-A nrPDB Length = 294 Score = 27.9 bits (61), Expect = 2.6, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 6/60 (10%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTV---FDNYAVTVMIGGEPYTLGLFDTAGQE 62 CV++G GK+ L+ T+ + Y + I +G+ D++ QE Sbjct: 63 CVLLGRNGAGKSTLVN-LIYG-MIWATSGTIRLFQETYG-EIAIQDLRKRIGILDSSQQE 119 >6H7G-A nrPDB Length = 346 Score = 27.9 bits (61), Expect = 2.7, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 3/28 (10%) Query: 1 MQTIKCVVVG---DGAVGKTCLLISYTT 25 M K VV+G D GK+ + T+ Sbjct: 2 MDKDKTVVIGLAADSGCGKSTFMRRMTS 29 >1ZE1-A nrPDB Length = 309 Score = 27.9 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 23/64 (35%), Gaps = 3/64 (4%) Query: 96 KWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAE--KLARDLKAVK 153 +W+P + H T +L G+QI L + + E LA + Sbjct: 227 EWLPRVVVHQESTKMILNGSQIHLEMLKEWDGFKKGEVVR-VFNEEGRLLALAEAERNSS 285 Query: 154 YVEC 157 ++E Sbjct: 286 FLET 289 >1U0L-A nrPDB Length = 301 Score = 27.9 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 14/108 (12%), Positives = 36/108 (33%), Gaps = 15/108 (13%) Query: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR 120 + L D ++ +V P + + +K++ + +T ++ ++DL Sbjct: 71 LHRKNLLTKPHVANVDQVILVVTVKMPETSTYIIDKFLVLAEKNELETVMVI--NKMDLY 128 Query: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNV 168 D+ + + V+ SA T G++ + Sbjct: 129 DEDDLRKVRELEEIYS-------------GLYPIVKTSAKTGMGIEEL 163 >4O0M-A nrPDB Length = 524 Score = 27.5 bits (60), Expect = 3.1, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 13/35 (37%) Query: 7 VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA 41 +V G GKT + + N P +F + Sbjct: 44 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTFE 78 >3LLM-A nrPDB Length = 235 Score = 27.5 bits (60), Expect = 3.1, Method: Composition-based stats. Identities = 5/26 (19%), Positives = 10/26 (38%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSE 31 ++ G GKT + + + F Sbjct: 79 VIIRGATGCGKTTQVPQFILDDFIQN 104 >4V7D-BZ nrPDB Length = 711 Score = 27.5 bits (60), Expect = 3.2, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 4/70 (5%) Query: 49 EPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKT 108 EP+ + + DT G D+ S D ++ + V ++ + W + P+ Sbjct: 79 EPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQS-ETVWRQANKYKVPRI 137 Query: 109 PFLLVGTQID 118 F+ ++D Sbjct: 138 AFV---NKMD 144 >1ZO1-I nrPDB Length = 501 Score = 27.5 bits (60), Expect = 3.2, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 18/174 (10%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65 ++G GKT LL Y + + + + E + DT G + Sbjct: 7 VTIMGHVDHGKTSLLE-YIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAAFT 65 Query: 66 RLRPLSYPQTDVFLVCFSVVS---PSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDD 122 +R TD+ ++ + P + E ++ ++ +ID + Sbjct: 66 SMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVA-------VNKIDKPEA 118 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 K ++ + E ++V SA G+ + D +L A Sbjct: 119 DPDRVKNELSQYGILPEEWG-------GESQFVHVSAKAGTGIDELLDAILLQA 165 >2OUK-A nrPDB Length = 263 Score = 27.5 bits (60), Expect = 3.3, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 17/53 (32%), Gaps = 12/53 (22%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDT 58 VV+G GK+ L + D ++I G L DT Sbjct: 53 VVVIGPSGSGKSTFLRCLN----------LLEDFDEGEIIIDG--INLKAKDT 93 >5MKK-A nrPDB Length = 611 Score = 27.5 bits (60), Expect = 3.4, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 10/22 (45%), Gaps = 3/22 (13%) Query: 5 KCVVVGDGAVGKT---CLLISY 23 K +VG GKT L+ + Sbjct: 387 KVALVGATGAGKTSVVSLIARF 408 >5B57-C nrPDB Length = 273 Score = 27.5 bits (60), Expect = 3.4, Method: Composition-based stats. Identities = 5/20 (25%), Positives = 10/20 (50%) Query: 7 VVVGDGAVGKTCLLISYTTN 26 ++G GK+ LL ++ Sbjct: 31 ALLGRNGAGKSTLLKTFAGE 50 >4YPN-A nrPDB Length = 293 Score = 27.5 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 8/14 (57%), Positives = 9/14 (64%) Query: 6 CVVVGDGAVGKTCL 19 V+VG VGKT L Sbjct: 146 LVLVGPPGVGKTSL 159 >4FID-A nrPDB Length = 340 Score = 27.5 bits (60), Expect = 3.5, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 3/35 (8%) Query: 4 IKCVVVGDGAVGKTCLLIS---YTTNKFPSEYVPT 35 I +++G G GK+ + FP + T Sbjct: 6 ITVMLLGSGESGKSTIAKQLKILFGGGFPEQERAT 40 >1NI3-A nrPDB Length = 392 Score = 27.5 bits (60), Expect = 3.6, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 30/86 (34%), Gaps = 17/86 (19%) Query: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVF--DNYAVTVMIGGEPYTLGLFDTAG 60 +K +VG VGK+ F + + NY I E + + D Sbjct: 20 NLKTGIVGMPNVGKSTF--------FRAITKSVLGNPANYPYA-TIDPEEAKVAVPD--- 67 Query: 61 QEDYDRLRPLSYPQTD--VFLVCFSV 84 E +D L P++ FL F + Sbjct: 68 -ERFDWLCEAYKPKSRVPAFLTVFDI 92 >5A9Z-CA nrPDB Length = 593 Score = 27.5 bits (60), Expect = 3.7, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 37/122 (30%), Gaps = 25/122 (20%) Query: 15 GKTCLLISYTT--NKFPSEYVPT--------VFDNYAVTVMIGGE-----PYTLGLFDTA 59 GKT L+ F S + +T++ Y + + DT Sbjct: 17 GKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAAIKWDYRINIVDTP 76 Query: 60 GQEDYDRLRPLSYPQTDVFLVC---FSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQ 116 G D+ D L+ F P + K+ + + P +++ + Sbjct: 77 GHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLK------PIVVI-NK 129 Query: 117 ID 118 +D Sbjct: 130 VD 131 >5JWO-A nrPDB Length = 247 Score = 27.5 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 13/35 (37%) Query: 7 VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA 41 +V G GKT + + N P +F + Sbjct: 36 LVSGTSGTGKTLFAVQFLYNGITIFNEPGIFVTFE 70 >6G12-A nrPDB Length = 301 Score = 27.5 bits (60), Expect = 3.8, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 3/59 (5%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 + I+ ++VG VGK+ L+ + +G L L DT G Sbjct: 126 RAIRAMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNA---LQLLDTPG 181 >3PV0-A nrPDB Length = 381 Score = 27.5 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 7/15 (46%), Positives = 8/15 (53%) Query: 6 CVVVGDGAVGKTCLL 20 V VG GK+ LL Sbjct: 32 VVFVGPSGCGKSTLL 46 >2NQL-A nrPDB Length = 388 Score = 27.5 bits (60), Expect = 4.0, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 13/26 (50%) Query: 53 LGLFDTAGQEDYDRLRPLSYPQTDVF 78 + L+D AGQE +R L D F Sbjct: 128 IALWDIAGQEAGKSIRDLLGGGVDSF 153 >1IQP-A nrPDB Length = 327 Score = 27.5 bits (60), Expect = 4.1, Method: Composition-based stats. Identities = 18/165 (10%), Positives = 50/165 (30%), Gaps = 28/165 (16%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPT---VFDNYAVTVMIGGEPYTLGLFDTAGQE 62 + G VGKT ++ F + + + + + E Sbjct: 49 LLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGINVIREKVK---------- 98 Query: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGT------- 115 ++ R +P+ F + F + + ++ ++ + F+L Sbjct: 99 EFARTKPI---GGASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIE 155 Query: 116 ----QIDLRDDPSTIEKLAKNKQKPITPETAEKLARD-LKAVKYV 155 + + ++ + + I +L + L+A+ Y+ Sbjct: 156 PIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYI 200 >5D4W-A nrPDB Length = 926 Score = 27.1 bits (59), Expect = 4.1, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 11/14 (78%) Query: 7 VVVGDGAVGKTCLL 20 V++G+ VGKT ++ Sbjct: 220 VLIGEPGVGKTTIV 233 >2IW3-A nrPDB Length = 986 Score = 27.1 bits (59), Expect = 4.2, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 5/39 (12%) Query: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT 43 + V+G GK+ L+ T E +PT + Y Sbjct: 701 RIAVIGPNGAGKSTLINVLTG-----ELLPTSGEVYTHE 734 >6QUZ-B nrPDB Length = 599 Score = 27.1 bits (59), Expect = 4.2, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 11/22 (50%), Gaps = 3/22 (13%) Query: 5 KCVVVGDGAVGKTC---LLISY 23 K +VG GKT LL+ + Sbjct: 383 KVALVGPTGSGKTTIVNLLMRF 404 >5JSZ-B nrPDB Length = 287 Score = 27.1 bits (59), Expect = 4.2, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 16/47 (34%), Gaps = 10/47 (21%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYT 52 +VG GK+ L+ F + PT + I G T Sbjct: 36 IALVGHTGSGKSTLM-----QHFNALLKPTSG-----KIEIAGYTIT 72 >4KXX-A nrPDB Length = 637 Score = 27.1 bits (59), Expect = 4.2, Method: Composition-based stats. Identities = 9/41 (21%), Positives = 15/41 (36%) Query: 118 DLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECS 158 DL S + E A +LA + K + ++ S Sbjct: 433 DLAMFRSVPTSTVFYPSDGVATEKAVELAANTKGICFIRTS 473 >1JAL-A nrPDB Length = 363 Score = 27.1 bits (59), Expect = 4.3, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 12/22 (54%) Query: 4 IKCVVVGDGAVGKTCLLISYTT 25 KC +VG VGK+ L + T Sbjct: 3 FKCGIVGLPNVGKSTLFNALTK 24 >4A9A-A nrPDB Length = 376 Score = 27.1 bits (59), Expect = 4.3, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 3/56 (5%) Query: 6 CVVVGDGAVGKTCLLISYT-TNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60 VG +VGK+ LL T T +EY T + G + + D G Sbjct: 75 VGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGVIRYKG--AKIQMLDLPG 128 >6ED3-A nrPDB Length = 848 Score = 27.1 bits (59), Expect = 4.4, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 11/14 (78%) Query: 7 VVVGDGAVGKTCLL 20 V++G+ VGKT ++ Sbjct: 203 VLIGEPGVGKTAIV 216 >5OFO-C nrPDB Length = 871 Score = 27.1 bits (59), Expect = 4.4, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 11/14 (78%) Query: 7 VVVGDGAVGKTCLL 20 V++G+ VGKT ++ Sbjct: 207 VLIGEPGVGKTAIV 220 >4XD7-D nrPDB Length = 483 Score = 27.1 bits (59), Expect = 4.5, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 10/22 (45%) Query: 5 KCVVVGDGAVGKTCLLISYTTN 26 K + G VGKT L+ N Sbjct: 163 KIGLFGGAGVGKTVLIQELIHN 184 >4CIU-A nrPDB Length = 727 Score = 27.1 bits (59), Expect = 4.6, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 11/14 (78%) Query: 7 VVVGDGAVGKTCLL 20 V++G+ VGKT ++ Sbjct: 61 VLIGEPGVGKTAIV 74 >1JBK-A nrPDB Length = 195 Score = 27.1 bits (59), Expect = 4.6, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 11/14 (78%) Query: 7 VVVGDGAVGKTCLL 20 V++G+ VGKT ++ Sbjct: 47 VLIGEPGVGKTAIV 60 >2P65-A nrPDB Length = 187 Score = 27.1 bits (59), Expect = 4.8, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 11/14 (78%) Query: 7 VVVGDGAVGKTCLL 20 +++GD VGKT ++ Sbjct: 47 ILLGDPGVGKTAIV 60 >6C2V-A nrPDB Length = 115 Score = 27.1 bits (59), Expect = 4.9, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 3/38 (7%) Query: 1 MQTIKCVVVGDGAVGKTCL--LISYTTNKFPSEYVPTV 36 M+ I V+VG GKT L L + P + TV Sbjct: 1 MRVI-VVIVGPSGAGKTTLDELARKAKEEVPDAEIRTV 37 >1QVR-A nrPDB Length = 854 Score = 27.1 bits (59), Expect = 4.9, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 11/14 (78%) Query: 7 VVVGDGAVGKTCLL 20 V++G+ VGKT ++ Sbjct: 195 VLIGEPGVGKTAIV 208 >6FKI-F nrPDB Length = 498 Score = 27.1 bits (59), Expect = 5.1, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 11/22 (50%) Query: 5 KCVVVGDGAVGKTCLLISYTTN 26 K + G VGKT L++ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINN 188 >5LKM-A nrPDB Length = 452 Score = 27.1 bits (59), Expect = 5.1, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 13/21 (61%) Query: 6 CVVVGDGAVGKTCLLISYTTN 26 ++ GD +GK+ LL+ +T Sbjct: 91 VLIGGDPGIGKSTLLLQVSTQ 111 >4AC9-A nrPDB Length = 482 Score = 27.1 bits (59), Expect = 5.1, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 56/186 (30%), Gaps = 18/186 (9%) Query: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVF-DNYAVTVMIGGEPYTLG-----L 55 + I + G GKT L T S + +T+ IG + L L Sbjct: 18 KNINLGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKLENYRITL 77 Query: 56 FDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGT 115 D G D R + D+ L+ + + + + H P ++V T Sbjct: 78 VDAPGHADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLI--LDHF--NIPIIVVIT 133 Query: 116 QIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 175 + D K + +LK + SA T G+ + I+ Sbjct: 134 KSDNAGTEEIKRTEMIMKSILQST-------HNLKNSSIIPISAKTGFGVDEL-KNLIIT 185 Query: 176 ALEPPE 181 L E Sbjct: 186 TLNNAE 191 >2W6I-D nrPDB Length = 528 Score = 27.1 bits (59), Expect = 5.2, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 11/22 (50%) Query: 5 KCVVVGDGAVGKTCLLISYTTN 26 K + G VGKT L++ N Sbjct: 201 KIGLFGGAGVGKTVLIMELINN 222 >4V6V-A1 nrPDB Length = 639 Score = 27.1 bits (59), Expect = 5.2, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 42/160 (26%), Gaps = 23/160 (14%) Query: 1 MQTIKCVVVGDGAVGKTCLLISYTT--------NKFPSEYVPTVFDNYAVT--VMIGG-- 48 M+ I ++ GKT L S T N + I Sbjct: 1 MKIINLGILAHVDAGKTTLTESLLYTSGAIAELGSVDEGTTRTDTMNLERQRGITIQTAV 60 Query: 49 -----EPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH 103 E + + DT G D+ S D ++ S + + + Sbjct: 61 TSFQWEDVKVNIIDTPGHMDFLAEVYRSLSVLDGAVLLVSAKDGIQ---AQTRILFH-AL 116 Query: 104 HCPKTPFLLVGTQIDLR--DDPSTIEKLAKNKQKPITPET 141 K P + +ID D P ++ I + Sbjct: 117 QIMKIPTIFFINKIDQEGIDLPMVYREMKAKLSSEIIVKQ 156 >6MTD-v nrPDB Length = 839 Score = 26.8 bits (58), Expect = 5.4, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 24/72 (33%), Gaps = 4/72 (5%) Query: 47 GGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCP 106 G + + L D+ G D+ + TD LV VS + Sbjct: 75 DGAGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVL----RQAIAE 130 Query: 107 KTPFLLVGTQID 118 + +L+ ++D Sbjct: 131 RIKPVLMMNKMD 142 >3B5X-A nrPDB Length = 582 Score = 26.8 bits (58), Expect = 5.4, Method: Composition-based stats. Identities = 5/19 (26%), Positives = 9/19 (47%) Query: 6 CVVVGDGAVGKTCLLISYT 24 +VG GK+ + +T Sbjct: 372 VALVGRSGSGKSTIANLFT 390 >1R6B-X nrPDB Length = 758 Score = 26.8 bits (58), Expect = 5.5, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 10/14 (71%) Query: 7 VVVGDGAVGKTCLL 20 ++VG+ VGKT + Sbjct: 211 LLVGESGVGKTAIA 224 >3K8N-A nrPDB Length = 185 Score = 26.8 bits (58), Expect = 5.6, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 14/33 (42%) Query: 27 KFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 KF E + Y V+ G+P L ++ T Sbjct: 47 KFRLESLDNPGQFYQADVLTQGKPVLLNVWATW 79 >1Z5Y-E nrPDB Length = 149 Score = 26.8 bits (58), Expect = 5.6, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 14/33 (42%) Query: 27 KFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59 KF E + Y V+ G+P L ++ T Sbjct: 5 KFRLESLDNPGQFYQADVLTQGKPVLLNVWATW 37 >4Q7L-A nrPDB Length = 256 Score = 26.8 bits (58), Expect = 5.6, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 11/22 (50%), Gaps = 3/22 (13%) Query: 5 KCVVVGDGAVGKTC---LLISY 23 K +VG GKT LL+ + Sbjct: 33 KVALVGPTGSGKTTIVNLLMRF 54 >5LZT-jj nrPDB Length = 637 Score = 26.8 bits (58), Expect = 5.6, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Query: 110 FLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKN 167 +L+ ++D + E+ + K+K + K + ++ CS LT LK Sbjct: 354 IVLI-NKMDDPTVNWSNERYEECKEKLVPFLKKVGF-NPKKDIHFMPCSGLTGANLKE 409 >3JCN-b nrPDB Length = 890 Score = 26.8 bits (58), Expect = 5.6, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 18/174 (10%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYD 65 ++G GKT LL Y + + + + E + DT G + Sbjct: 394 VTIMGHVDHGKTSLLD-YIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAAFT 452 Query: 66 RLRPLSYPQTDVFLVCFSVVS---PSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDD 122 +R TD+ ++ + P + E ++ ++ +ID + Sbjct: 453 SMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVA-------VNKIDKPEA 505 Query: 123 PSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAA 176 K ++ + E ++V SA G+ + D +L A Sbjct: 506 DPDRVKNELSQYGILPEEWG-------GESQFVHVSAKAGTGIDELLDAILLQA 552 >3VX4-A nrPDB Length = 273 Score = 26.8 bits (58), Expect = 5.7, Method: Composition-based stats. Identities = 7/17 (41%), Positives = 8/17 (47%) Query: 5 KCVVVGDGAVGKTCLLI 21 K +VG GKT L Sbjct: 63 KVSLVGASGSGKTTLAK 79 >5ZME-A nrPDB Length = 687 Score = 26.8 bits (58), Expect = 6.0, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 12/68 (17%) Query: 6 CVVVGDGAVGKTCLLIS---------YTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLF 56 ++ G G VGKT L S +TT ++ ++ D+ A V GG P L Sbjct: 15 IMISGKGGVGKTSLSASLAVKLAAAGHTTLVVSTDPAHSLSDSLAQDVS-GGRPVLLQGT 73 Query: 57 D--TAGQE 62 D G E Sbjct: 74 DLPLWGLE 81 >5CDF-E nrPDB Length = 474 Score = 26.8 bits (58), Expect = 6.0, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 11/22 (50%) Query: 5 KCVVVGDGAVGKTCLLISYTTN 26 K + G VGKT L++ N Sbjct: 146 KIGLFGGAGVGKTVLIMELINN 167 >2XND-D nrPDB Length = 467 Score = 26.8 bits (58), Expect = 6.0, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 11/22 (50%) Query: 5 KCVVVGDGAVGKTCLLISYTTN 26 K + G VGKT L++ N Sbjct: 143 KIGLFGGAGVGKTVLIMELINN 164 >6HA8-V nrPDB Length = 548 Score = 26.8 bits (58), Expect = 6.0, Method: Composition-based stats. Identities = 7/17 (41%), Positives = 9/17 (52%) Query: 5 KCVVVGDGAVGKTCLLI 21 K ++G GKT LL Sbjct: 325 KVAIIGPNGSGKTTLLN 341 >4HSE-A nrPDB Length = 397 Score = 26.8 bits (58), Expect = 6.3, Method: Composition-based stats. Identities = 6/14 (42%), Positives = 11/14 (78%) Query: 7 VVVGDGAVGKTCLL 20 V++G+ VGKT ++ Sbjct: 58 VLIGEPGVGKTAIV 71 >4NAR-A nrPDB Length = 435 Score = 26.8 bits (58), Expect = 6.6, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 2/67 (2%) Query: 41 AVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPE 100 V + GE Y ++ TAG+ Y RP + ++ + +KW+ E Sbjct: 269 RRAVQVIGEEYD-EVW-TAGKGSYKLQRPGVMAKGGQIIIYAPHIKRFHSNPQMDKWIRE 326 Query: 101 ITHHCPK 107 I +HC Sbjct: 327 IGYHCKD 333 >3L43-A nrPDB Length = 319 Score = 26.8 bits (58), Expect = 6.6, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 12/23 (52%) Query: 6 CVVVGDGAVGKTCLLISYTTNKF 28 VVG + GK+ +L ++ F Sbjct: 47 IAVVGGQSAGKSSVLENFVGRDF 69 >2AKA-B nrPDB Length = 299 Score = 26.8 bits (58), Expect = 6.8, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 12/23 (52%) Query: 6 CVVVGDGAVGKTCLLISYTTNKF 28 VVG + GK+ +L ++ F Sbjct: 29 IAVVGGQSAGKSSVLENFVGRDF 51 >3PXG-A nrPDB Length = 468 Score = 26.8 bits (58), Expect = 6.8, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 18/49 (36%), Gaps = 9/49 (18%) Query: 7 VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGL 55 V++G+ VGKT + + +N ++ TL + Sbjct: 205 VLIGEPGVGKTAIAEGLAQQ---------IINNEVPEILRDKRVMTLDM 244 >3J3U-A nrPDB Length = 810 Score = 26.8 bits (58), Expect = 6.9, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 18/49 (36%), Gaps = 9/49 (18%) Query: 7 VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGL 55 V++G+ VGKT + + +N ++ TL + Sbjct: 205 VLIGEPGVGKTAIAEGLAQQ---------IINNEVPEILRDKRVMTLDM 244 >1WXQ-A nrPDB Length = 397 Score = 26.8 bits (58), Expect = 7.0, Method: Composition-based stats. Identities = 10/73 (13%), Positives = 24/73 (32%), Gaps = 10/73 (13%) Query: 94 KEKW-VPEITHHCPKT-----PFLLVGTQIDLRDDPSTIEKLAKNKQK---PITPETAEK 144 KW ++ + P ++ + D D + + +++ I A + Sbjct: 195 PTKWSQDDLLAFASEIRRVNKPMVIAANKADAASDEQIKRLVREEEKRGYIVIPTSAAAE 254 Query: 145 LA-RDLKAVKYVE 156 L R ++E Sbjct: 255 LTLRKAAKAGFIE 267 >6GUA-A nrPDB Length = 822 Score = 26.4 bits (57), Expect = 7.1, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%) Query: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEA 172 R + I + +Q+ T E AEKLA D A +A + + VF A Sbjct: 598 RSKINHIVASKQPRQQWFTKEEAEKLATDGIATIDWASTAKDGEAVDLVFASA 650 >4MKI-B nrPDB Length = 298 Score = 26.4 bits (57), Expect = 7.1, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 16/48 (33%), Gaps = 5/48 (10%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL 53 ++G GK+ L+ P+ Y + I + +L Sbjct: 40 VGIIGHTGSGKSTLIQQL-----NGLLKPSKGKIYINGIDITDKKVSL 82 >4D61-i nrPDB Length = 426 Score = 26.4 bits (57), Expect = 7.1, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Query: 110 FLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKN 167 +L+ ++D + E+ + K+K + K + ++ CS LT LK Sbjct: 145 IVLI-NKMDDPTVNWSNERYEECKEKLVPFLKKVGF-NPKKDIHFMPCSGLTGANLKE 200 >4UUD-B nrPDB Length = 864 Score = 26.4 bits (57), Expect = 7.2, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 12/23 (52%) Query: 6 CVVVGDGAVGKTCLLISYTTNKF 28 VVG + GK+ +L ++ F Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDF 56 >2X2E-A nrPDB Length = 353 Score = 26.4 bits (57), Expect = 7.3, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 12/23 (52%) Query: 6 CVVVGDGAVGKTCLLISYTTNKF 28 VVG + GK+ +L ++ F Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDF 56 >3PXI-A nrPDB Length = 758 Score = 26.4 bits (57), Expect = 7.4, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 18/49 (36%), Gaps = 9/49 (18%) Query: 7 VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGL 55 V++G+ VGKT + + +N ++ TL + Sbjct: 205 VLIGEPGVGKTAIAEGLAQQ---------IINNEVPEILRDKRVMTLDM 244 >5TV4-A nrPDB Length = 605 Score = 26.4 bits (57), Expect = 7.6, Method: Composition-based stats. Identities = 5/21 (23%), Positives = 9/21 (42%), Gaps = 3/21 (14%) Query: 6 CVVVGDGAVGKT---CLLISY 23 +VG GK+ L+ + Sbjct: 395 VALVGRSGSGKSTIASLITRF 415 >3AEK-B nrPDB Length = 525 Score = 26.4 bits (57), Expect = 8.1, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 10/34 (29%) Query: 158 SALTQKGLKNVFDEAILAALEPPEPKKSRRCVLL 191 S G F + A P E C LL Sbjct: 126 SRKENYGADETFRALVRALAVPMERTPEVTCNLL 159 >6EMW-E nrPDB Length = 181 Score = 26.4 bits (57), Expect = 8.2, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 15/32 (46%) Query: 7 VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFD 38 V++G+ VGKT + +E T+ D Sbjct: 44 VLIGEPGVGKTAIAEGLAQAIVNNEVPETLKD 75 >3ZJC-A nrPDB Length = 305 Score = 26.4 bits (57), Expect = 8.4, Method: Composition-based stats. Identities = 5/17 (29%), Positives = 11/17 (64%) Query: 2 QTIKCVVVGDGAVGKTC 18 ++++ V+VG GK+ Sbjct: 12 RSLRIVLVGKTGSGKSA 28 >6EM8-A nrPDB Length = 818 Score = 26.4 bits (57), Expect = 8.6, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 15/32 (46%) Query: 7 VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFD 38 V++G+ VGKT + +E T+ D Sbjct: 205 VLIGEPGVGKTAIAEGLAQAIVNNEVPETLKD 236 >6MAT-A nrPDB Length = 813 Score = 26.4 bits (57), Expect = 8.7, Method: Composition-based stats. Identities = 9/20 (45%), Positives = 14/20 (70%) Query: 157 CSALTQKGLKNVFDEAILAA 176 S ++K +++VFDEAI A Sbjct: 276 TSGESEKNIRDVFDEAIRLA 295 >4XGC-E nrPDB Length = 460 Score = 26.4 bits (57), Expect = 8.8, Method: Composition-based stats. Identities = 5/22 (22%), Positives = 8/22 (36%) Query: 6 CVVVGDGAVGKTCLLISYTTNK 27 + G GKT L ++ Sbjct: 37 IYLFGHSGTGKTALTRAFLKEC 58 >2XTZ-A nrPDB Length = 354 Score = 26.4 bits (57), Expect = 8.8, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 7/49 (14%) Query: 5 KCVVVGDGAVGKTCLLIS---YTTNKFPS----EYVPTVFDNYAVTVMI 46 K +++G G GK+ + F YVP + N T+ + Sbjct: 11 KLLLLGAGESGKSTIFKQIKLLFQTGFDEGELKSYVPVIHANVYQTIKL 59 >5A3F-A nrPDB Length = 754 Score = 26.4 bits (57), Expect = 8.9, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 12/23 (52%) Query: 6 CVVVGDGAVGKTCLLISYTTNKF 28 VVG + GK+ +L ++ F Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDF 56 >6DLV-b nrPDB Length = 748 Score = 26.0 bits (56), Expect = 9.7, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 12/23 (52%) Query: 6 CVVVGDGAVGKTCLLISYTTNKF 28 VVG + GK+ +L ++ F Sbjct: 34 IAVVGGQSAGKSSVLENFVGRDF 56 >5DGX-A nrPDB Length = 256 Score = 26.0 bits (56), Expect = 9.7, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 18/52 (34%), Gaps = 4/52 (7%) Query: 6 CVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDN--YAVTVMIGGEPYTLGL 55 VG GKT L ++F +++ + + + + L + Sbjct: 47 VAFVGKSGSGKTTLTS--IISRFYTQHEGEILLDGVDTRELTLENLRSHLSI 96 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.317 0.153 0.451 Lambda K H 0.267 0.0469 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,564,353 Number of Sequences: 36641 Number of extensions: 353295 Number of successful extensions: 2512 Number of sequences better than 10.0: 423 Number of HSP's better than 10.0 without gapping: 427 Number of HSP's successfully gapped in prelim test: 145 Number of HSP's that attempted gapping in prelim test: 1520 Number of HSP's gapped (non-prelim): 631 length of query: 191 length of database: 10,336,785 effective HSP length: 92 effective length of query: 99 effective length of database: 6,965,813 effective search space: 689615487 effective search space used: 689615487 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 57 (26.4 bits)