BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P60487 (292 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4BX2-A nrPDB 580 e-166 2P27-A nrPDB 533 e-152 4BKM-A nrPDB 448 e-126 3PDW-A nrPDB 118 3e-27 1PW5-A nrPDB 109 1e-24 2C4N-A nrPDB 102 1e-22 4I9G-A nrPDB 100 6e-22 2HO4-A nrPDB 78 5e-15 2X4D-A nrPDB 73 1e-13 3HLT-A nrPDB 68 5e-12 4KNV-A nrPDB 43 1e-04 2GFH-A nrPDB 40 0.001 4PNH-A nrPDB 39 0.003 2YY6-A nrPDB 32 0.37 3KC2-A nrPDB 32 0.38 2O2X-A nrPDB 32 0.45 2HSZ-A nrPDB 30 1.1 1HWM-B nrPDB 28 3.3 1RXV-A nrPDB 28 4.4 3E5N-A nrPDB 28 5.1 1FT9-A nrPDB 28 5.2 3L8H-A nrPDB 27 8.0 3L1U-A nrPDB 27 8.7 3L8F-A nrPDB 27 8.9 >4BX2-A nrPDB Length = 293 Score = 580 bits (1495), Expect = e-166, Method: Compositional matrix adjust. Identities = 291/292 (99%), Positives = 291/292 (99%) Query: 1 MARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN 60 MARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN Sbjct: 2 MARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN 61 Query: 61 SRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRA 120 SRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRL GPPDASGAVFVLGGEGLRA Sbjct: 62 SRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLPGPPDASGAVFVLGGEGLRA 121 Query: 121 ELRAAGLRLAGDPGEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPL 180 ELRAAGLRLAGDPGEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPL Sbjct: 122 ELRAAGLRLAGDPGEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPL 181 Query: 181 SDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDI 240 SDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDI Sbjct: 182 SDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDI 241 Query: 241 LFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIADLMEGLED 292 LFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIADLMEGLED Sbjct: 242 LFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIADLMEGLED 293 >2P27-A nrPDB Length = 306 Score = 533 bits (1373), Expect = e-152, Method: Compositional matrix adjust. Identities = 269/296 (90%), Positives = 278/296 (93%), Gaps = 4/296 (1%) Query: 1 MARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN 60 +ARCERLRGAALRDVLG+AQGVLFDCDGVLWNGER VPGAPELL+RLARAGK LFVSNN Sbjct: 3 LARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN 62 Query: 61 SRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRA 120 SRRARPELALRFARLGF GLRAEQLFSSALCAARLLRQRL GPPDA GAVFVLGGEGLRA Sbjct: 63 SRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRA 122 Query: 121 ELRAAGLRLAGDP----GEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDP 176 ELRAAGLRLAGDP G PRVRAVLVGYDE FSF++L EACAHLRDP+CLLVATDRDP Sbjct: 123 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP 182 Query: 177 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRL 236 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMF+CITE+FS+DPARTLMVGDRL Sbjct: 183 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRL 242 Query: 237 ETDILFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIADLMEGLED 292 ETDILFGHRCGMTTVLTLTGVS LEEAQAYL AGQ DLVPHYYVESIADL EGLED Sbjct: 243 ETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLED 298 >4BKM-A nrPDB Length = 309 Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust. Identities = 237/307 (77%), Positives = 252/307 (82%), Gaps = 17/307 (5%) Query: 1 MARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN 60 MARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN Sbjct: 5 MARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN 64 Query: 61 SRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRA 120 SRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRL+G PD +VLG L A Sbjct: 65 SRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLAGVPDPKA--YVLGSPALAA 122 Query: 121 ELRAAGLR--------LAGDPGED-------PRVRAVLVGYDEQFSFSRLTEACAHLRDP 165 EL A G+ L GD D P VRAV+VG+D FS+ +LT+A +L+ P Sbjct: 123 ELEAVGVTSVGVGPDVLHGDGPSDWLAVPLEPDVRAVVVGFDPHFSYMKLTKAVRYLQQP 182 Query: 166 DCLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVD 225 DCLLV T+ D PL +G GTG L AVE A+ RQA ++GKPSPYMFQCITEDFSVD Sbjct: 183 DCLLVGTNMDNRLPLENGRFIAGTGCLVRAVEMAAQRQADIIGKPSPYMFQCITEDFSVD 242 Query: 226 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIAD 285 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIAD Sbjct: 243 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIAD 302 Query: 286 LMEGLED 292 LMEGLED Sbjct: 303 LMEGLED 309 >3PDW-A nrPDB Length = 266 Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 76/247 (30%), Positives = 121/247 (48%), Gaps = 13/247 (5%) Query: 16 LGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARL 75 L +G L D DG ++NG + A E ++ L G LFV+NNS R ++A + Sbjct: 3 LKTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSF 62 Query: 76 GFAGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLAGDPGE 135 EQ+F++++ A+ + Q+ DAS V+V+G EG+R + GL G+ + Sbjct: 63 DIPATE-EQVFTTSMATAQHIAQQ---KKDAS--VYVIGEEGIRQAIEENGLTFGGENAD 116 Query: 136 DPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPLSDGSRTPGTGSLAAA 195 V+VG D ++ + C +R+ ++T+ D P G PG GSL + Sbjct: 117 -----FVVVGIDRSITYEKFAVGCLAIRN-GARFISTNGDIAIPTERG-LLPGNGSLTSV 169 Query: 196 VETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLT 255 + ++G Q + +GKP + + D + TLMVGD TDI+ G GM T+L T Sbjct: 170 LTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHT 229 Query: 256 GVSSLEE 262 GV+ E Sbjct: 230 GVTKREH 236 >1PW5-A nrPDB Length = 253 Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/251 (29%), Positives = 124/251 (49%), Gaps = 14/251 (5%) Query: 15 VLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFAR 74 +L + + + D DG + + ++PG+ E L+ L K +F +NNS + + Sbjct: 1 MLDKIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRN 60 Query: 75 LGFAGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLAGDPG 134 +G + S + A +L++ +F+LG L+ A G + Sbjct: 61 MGVDVPDDAVVTSGEITAEHMLKRF------GRCRIFLLGTPQLKKVFEAYGHVIDE--- 111 Query: 135 EDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPLSDGSRTPGTGSLAA 194 E+P V++G+D+ ++ RL +AC LR +AT D P +G P GS+ A Sbjct: 112 ENPDF--VVLGFDKTLTYERLKKACILLRKGK-FYIATHPDINCPSKEGP-VPDAGSIMA 167 Query: 195 AVETASGRQA-LVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLT 253 A+E ++GR+ L+ GKP+P + I+E F V R MVGDRL TD+ G G+ ++L Sbjct: 168 AIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILV 227 Query: 254 LTGVSSLEEAQ 264 LTG ++ E+ + Sbjct: 228 LTGETTPEDLE 238 >2C4N-A nrPDB Length = 250 Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 75/244 (30%), Positives = 117/244 (47%), Gaps = 19/244 (7%) Query: 20 QGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAG 79 + V+ D DGVL + VPGA E L + G + ++N + +LA RFA G Sbjct: 4 KNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAG-VD 62 Query: 80 LRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLAGDPGEDPRV 139 + ++SA+ A LR++ +V+G L EL AG + D Sbjct: 63 VPDSVFYTSAMATADFLRRQ------EGKKAYVVGEGALIHELYKAGFTIT-----DVNP 111 Query: 140 RAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPLSDG-SRTPGTGSLAAAVET 198 V+VG +++ + +A A+ +AT+ D + G P G+L A +E Sbjct: 112 DFVIVGETRSYNWDMMHKA-AYFVANGARFIATNPD-----THGRGFYPACGALCAGIEK 165 Query: 199 ASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVS 258 SGR+ VGKPSP++ + T++VGD L TDIL G + G+ T+L L+GVS Sbjct: 166 ISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVS 225 Query: 259 SLEE 262 SL++ Sbjct: 226 SLDD 229 >4I9G-A nrPDB Length = 361 Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 89/255 (34%), Positives = 130/255 (50%), Gaps = 20/255 (7%) Query: 12 LRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALR 71 ++ + + +L D DG ++ G + GA +Q L++ LFV+NN+ R+ E+A Sbjct: 9 MKSIAQEHDCLLIDLDGTVFCGRQPTGGA---VQSLSQVRSRKLFVTNNASRSADEVAAH 65 Query: 72 FARLGFAGLRAEQLFSSALCAARLLRQRLSGPPDASGA-VFVLGGEGLRAELRAAGLRLA 130 LGF E + +SA AA LL +L A GA V ++G E L E+ A GLR Sbjct: 66 LCELGFTAT-GEDVVTSAQSAAHLLAGQL-----APGARVLIVGTEALANEVAAVGLRPV 119 Query: 131 GDPGEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPLSDGSRTPGTG 190 + P AV+ G +S L EA +R L VA + DP P G PG G Sbjct: 120 RRFEDRPD--AVVQGLSMTTGWSDLAEAALAIR-AGALWVAANVDPTLPTERG-LLPGNG 175 Query: 191 SLAAAVETASGRQALVVGKPSP-YMFQCITE-DFSVDPARTLMVGDRLETDILFGHRCGM 248 S+ AA+ TA+G V GKP+P M + + DF L+VGDRL+TDI + G+ Sbjct: 176 SMVAALRTATGMDPRVAGKPAPALMTEAVARGDFRA----ALVVGDRLDTDIEGANAAGL 231 Query: 249 TTVLTLTGVSSLEEA 263 +++ LTGV+S +A Sbjct: 232 PSLMVLTGVNSAWDA 246 >2HO4-A nrPDB Length = 259 Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 67/238 (28%), Positives = 103/238 (43%), Gaps = 20/238 (8%) Query: 20 QGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAG 79 + VL D +G L + VPGA E L+RL FV+N ++ + +L R +L F Sbjct: 8 KAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE- 66 Query: 80 LRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLAGDPGEDPRV 139 + +++F+S A L+ Q+ P + +L L G +DP Sbjct: 67 ISEDEIFTSLTAARNLIEQKQVRP------MLLLDDRALP--------EFTGVQTQDPN- 111 Query: 140 RAVLVGY-DEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPLSDGSRTPGTGSLAAAVET 198 AV++G E F + L +A L D L+A + ++ DG G G A+E Sbjct: 112 -AVVIGLAPEHFHYQLLNQAFRLLLD-GAPLIAIHKARYYKRKDGLAL-GPGPFVTALEY 168 Query: 199 ASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTG 256 A+ +A+VVGKP F D P +M+GD D+ GM +L TG Sbjct: 169 ATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTG 226 >2X4D-A nrPDB Length = 271 Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 22/246 (8%) Query: 16 LGQAQGVLFDCDGVLWNGERIVPG----APELLQRLARAGKNTLFVSNNSRRARPELALR 71 L +GVL D GVL++ + E + RL R+ F +N S +R EL + Sbjct: 9 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQ 68 Query: 72 FARLGFAGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLAG 131 RLGF + +++ + A A ++L++R P ++L +G+R+E Sbjct: 69 LQRLGF-DISEQEVTAPAPAACQILKERGLRP-------YLLIHDGVRSEFDQIDT---- 116 Query: 132 DPGEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDC-LLVATDRDPWHPLSDGSRTPGTG 190 +P V+ E FS+ + A L + + +L++ + ++ + G G Sbjct: 117 ---SNPNC-VVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYAATSGLML-DVG 171 Query: 191 SLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTT 250 A+E A G +A VVGKPSP F+ + V+ + +M+GD + D+ RCGM Sbjct: 172 PYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRA 231 Query: 251 VLTLTG 256 + TG Sbjct: 232 LQVRTG 237 >3HLT-A nrPDB Length = 266 Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 69/238 (28%), Positives = 104/238 (43%), Gaps = 20/238 (8%) Query: 20 QGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAG 79 + VL D G L + VPGA E L+RL A FV+N ++ ++ +L R +L F Sbjct: 8 KAVLVDLSGTLHIEDAAVPGAQEALKRLRGASVIIRFVTNTTKESKQDLLERLRKLEF-D 66 Query: 80 LRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLAGDPGEDPRV 139 + +++F+S L AAR L +R P + ++ L G DP Sbjct: 67 ISEDEIFTS-LTAARSLLERKQVRP-----MLLVDDRALP--------DFKGIQTSDPN- 111 Query: 140 RAVLVGY-DEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPLSDGSRTPGTGSLAAAVET 198 AV++G E F + L +A L D L+A + ++ DG G G A+E Sbjct: 112 -AVVMGLAPEHFHYQILNQAFRLLLD-GAPLIAIHKARYYKRKDGLAL-GPGPFVTALEY 168 Query: 199 ASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTG 256 A+ +A VVGKP F +P +M+GD D+ GM +L TG Sbjct: 169 ATDTKATVVGKPEKTFFLEALRGTGCEPEEAVMIGDDCRDDVGGAQDVGMLGILVKTG 226 >4KNV-A nrPDB Length = 241 Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 19/115 (16%) Query: 180 LSDGSRTPGTGSLAAAVETASGRQALVVG------KPSPYMFQCITEDFSVDPARTLMVG 233 L++G R + A S A+VVG KP+P +F V P +MVG Sbjct: 125 LTNGDRQTQREKIEACA-CQSYFDAVVVGGEQREEKPAPSIFYYCCNLLGVQPGDCVMVG 183 Query: 234 DRLETDILFGHRCGM--TTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIADL 286 D LETDI G G+ T + G+ L+ + VPHY V S+ +L Sbjct: 184 DTLETDIQGGLNAGLKATVWINKNGIVPLKSSP----------VPHYMVSSVLEL 228 >2GFH-A nrPDB Length = 260 Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 15/113 (13%) Query: 180 LSDGSRTPGTGSLAAAVETASGRQALVVG------KPSPYMFQCITEDFSVDPARTLMVG 233 L++G R + A S A+V+G KP+P +F + V P +MVG Sbjct: 142 LTNGDRQTQREKIEACA-CQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVG 200 Query: 234 DRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIADL 286 D LETDI G G+ + + + + LT+ +PHY V S+ +L Sbjct: 201 DTLETDIQGGLNAGLKATVWIN-----KSGRVPLTSSP---MPHYMVSSVLEL 245 >4PNH-A nrPDB Length = 199 Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 209 KPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLT 268 KP P M + I E F +DPA T +VGD L D+ G G L LTG A L Sbjct: 119 KPMPGMMKLIAERFEIDPADTPVVGDSLR-DLQAGAALGFRPHLVLTGKGKKTLAAGGLP 177 Query: 269 AGQR 272 G R Sbjct: 178 EGTR 181 >2YY6-A nrPDB Length = 213 Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 8/68 (11%) Query: 200 SGRQALVVG-------KPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVL 252 SG L+VG KPSP E +P + L+VGD + DI G R G T L Sbjct: 121 SGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDT-DADIEAGKRAGTKTAL 179 Query: 253 TLTGVSSL 260 L G L Sbjct: 180 ALWGYVKL 187 >3KC2-A nrPDB Length = 352 Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%) Query: 24 FDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN---SRRARPEL 68 FD DGVL+ G++ + GA + L+ L R + ++N S RAR E Sbjct: 18 FDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEF 65 >2O2X-A nrPDB Length = 218 Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 15/80 (18%) Query: 209 KPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLT 268 KP+P M + ++D R+L+VGD+L D+ G R G+ AQ +L Sbjct: 137 KPNPGMLVEAGKRLALDLQRSLIVGDKL-ADMQAGKRAGL--------------AQGWLV 181 Query: 269 AGQRDLVPHYYVESIADLME 288 G+ + P + + + D E Sbjct: 182 DGEAAVQPGFAIRPLRDSSE 201 >2HSZ-A nrPDB Length = 243 Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 201 GRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTV 251 G Q+L KP P F + F + P + L VGD + DI H G V Sbjct: 162 GGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDS-QNDIFAAHSAGCAVV 211 >1HWM-B nrPDB Length = 266 Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust. Identities = 20/74 (27%), Positives = 29/74 (39%) Query: 160 AHLRDPDCLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFQCIT 219 +++ DC A D W L DGS + L + + R L++ Q T Sbjct: 73 SYIMITDCSTAAEDATKWEVLIDGSIINPSSGLVMTAPSGASRTTLLLENNIHAASQGWT 132 Query: 220 EDFSVDPARTLMVG 233 V P TL+VG Sbjct: 133 VSNDVQPIATLIVG 146 >1RXV-A nrPDB Length = 336 Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 5/81 (6%) Query: 17 GQAQGVLFDCDG-VLWNGER----IVPGAPELLQRLARAGKNTLFVSNNSRRARPELALR 71 G+AQ G V + G + ++ G+P L + LA GK L N +PE+ + Sbjct: 152 GEAQAAYMAAKGDVEYTGSQDYDSLLFGSPRLARNLAITGKRKLPGKNVYVDVKPEIIIL 211 Query: 72 FARLGFAGLRAEQLFSSALCA 92 + L GL EQL A+ Sbjct: 212 ESNLKRLGLTREQLIDIAILV 232 >3E5N-A nrPDB Length = 386 Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 9/66 (13%) Query: 111 FVLGGEGLRAELRAAGLRLAGDPGEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLV 170 + GG+ E+ R D + R VL+G D+Q + H+ DPD L+ Sbjct: 27 LIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGIDKQGQW--------HVNDPDSFLL 78 Query: 171 ATDRDP 176 D DP Sbjct: 79 HAD-DP 83 >1FT9-A nrPDB Length = 222 Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 8/66 (12%) Query: 117 GLRAELRAAGLRLAGDPGE--------DPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCL 168 G R+++ A G + G+ D R+R LVG + + S LT CL Sbjct: 22 GFRSKIHAKGSLVCTGEGDENGVFVVVDGRLRVYLVGEEREISLFYLTSGDMFCMHSGCL 81 Query: 169 LVATDR 174 + AT+R Sbjct: 82 VEATER 87 >3L8H-A nrPDB Length = 179 Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Query: 209 KPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLT 268 KP P M++ I + VD A VGD L D+ + G L TG AQ L Sbjct: 101 KPLPGMYRDIARRYDVDLAGVPAVGDSLR-DLQAAAQAGCAPWLVQTGNGRKTLAQGGLP 159 Query: 269 AGQR 272 G R Sbjct: 160 EGTR 163 >3L1U-A nrPDB Length = 211 Score = 27.3 bits (59), Expect = 8.7, Method: Compositional matrix adjust. Identities = 14/36 (38%), Positives = 18/36 (50%) Query: 202 RQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLE 237 RQ KP P M + +D A + MVGD+LE Sbjct: 124 RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLE 159 >3L8F-A nrPDB Length = 187 Score = 27.3 bits (59), Expect = 8.9, Method: Compositional matrix adjust. Identities = 14/36 (38%), Positives = 18/36 (50%) Query: 202 RQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLE 237 RQ KP P M + +D A + MVGD+LE Sbjct: 104 RQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLE 139 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4BX2-A nrPDB 412 e-116 2P27-A nrPDB 394 e-110 4BKM-A nrPDB 376 e-105 1PW5-A nrPDB 253 1e-67 3PDW-A nrPDB 252 1e-67 2C4N-A nrPDB 246 6e-66 3HLT-A nrPDB 230 4e-61 2HO4-A nrPDB 230 6e-61 2X4D-A nrPDB 213 1e-55 4I9G-A nrPDB 212 1e-55 2GFH-A nrPDB 116 1e-26 4KNV-A nrPDB 113 1e-25 Sequences not found previously or not previously below threshold: 2YY6-A nrPDB 49 4e-06 3QUB-A nrPDB 46 3e-05 3KC2-A nrPDB 44 8e-05 4PNH-A nrPDB 43 2e-04 2HI0-A nrPDB 40 0.001 1CR6-A nrPDB 38 0.005 3L8H-A nrPDB 38 0.006 3KBB-A nrPDB 37 0.006 2HSZ-A nrPDB 37 0.010 1RQL-A nrPDB 37 0.011 4Y2Y-A nrPDB 37 0.012 2O2X-A nrPDB 36 0.025 5OLW-A nrPDB 35 0.046 3L8F-A nrPDB 35 0.050 3L1U-A nrPDB 34 0.060 4G9B-A nrPDB 34 0.063 3ZWK-A nrPDB 34 0.065 3OCV-A nrPDB 32 0.22 4DW8-A nrPDB 32 0.23 4RN3-A nrPDB 32 0.34 2P9J-A nrPDB 31 0.69 2HDO-A nrPDB 30 1.5 3IRU-A nrPDB 30 1.7 3PCT-A nrPDB 29 2.3 4OIW-A nrPDB 29 3.3 1GPJ-A nrPDB 29 3.3 3N07-A nrPDB 28 4.1 1TE2-A nrPDB 28 4.3 4OHF-A nrPDB 28 4.8 6DQX-A nrPDB 28 5.9 5HHZ-A nrPDB 28 6.3 2VOY-I nrPDB 27 7.5 4AP9-A nrPDB 27 7.9 3IVR-A nrPDB 27 9.2 >4BX2-A nrPDB Length = 293 Score = 412 bits (1060), Expect = e-116, Method: Composition-based stats. Identities = 291/292 (99%), Positives = 291/292 (99%) Query: 1 MARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN 60 MARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN Sbjct: 2 MARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN 61 Query: 61 SRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRA 120 SRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRL GPPDASGAVFVLGGEGLRA Sbjct: 62 SRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLPGPPDASGAVFVLGGEGLRA 121 Query: 121 ELRAAGLRLAGDPGEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPL 180 ELRAAGLRLAGDPGEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPL Sbjct: 122 ELRAAGLRLAGDPGEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPL 181 Query: 181 SDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDI 240 SDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDI Sbjct: 182 SDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDI 241 Query: 241 LFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIADLMEGLED 292 LFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIADLMEGLED Sbjct: 242 LFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIADLMEGLED 293 >2P27-A nrPDB Length = 306 Score = 394 bits (1012), Expect = e-110, Method: Composition-based stats. Identities = 269/296 (90%), Positives = 278/296 (93%), Gaps = 4/296 (1%) Query: 1 MARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN 60 +ARCERLRGAALRDVLG+AQGVLFDCDGVLWNGER VPGAPELL+RLARAGK LFVSNN Sbjct: 3 LARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN 62 Query: 61 SRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRA 120 SRRARPELALRFARLGF GLRAEQLFSSALCAARLLRQRL GPPDA GAVFVLGGEGLRA Sbjct: 63 SRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRA 122 Query: 121 ELRAAGLRLAGDP----GEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDP 176 ELRAAGLRLAGDP G PRVRAVLVGYDE FSF++L EACAHLRDP+CLLVATDRDP Sbjct: 123 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP 182 Query: 177 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRL 236 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMF+CITE+FS+DPARTLMVGDRL Sbjct: 183 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRL 242 Query: 237 ETDILFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIADLMEGLED 292 ETDILFGHRCGMTTVLTLTGVS LEEAQAYL AGQ DLVPHYYVESIADL EGLED Sbjct: 243 ETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLED 298 >4BKM-A nrPDB Length = 309 Score = 376 bits (966), Expect = e-105, Method: Composition-based stats. Identities = 234/307 (76%), Positives = 251/307 (81%), Gaps = 17/307 (5%) Query: 1 MARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN 60 MARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN Sbjct: 5 MARCERLRGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN 64 Query: 61 SRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRA 120 SRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRL+G PD +VLG L A Sbjct: 65 SRRARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLAGVPDP--KAYVLGSPALAA 122 Query: 121 ELRAAGLRLAGDPGE---------------DPRVRAVLVGYDEQFSFSRLTEACAHLRDP 165 EL A G+ G + +P VRAV+VG+D FS+ +LT+A +L+ P Sbjct: 123 ELEAVGVTSVGVGPDVLHGDGPSDWLAVPLEPDVRAVVVGFDPHFSYMKLTKAVRYLQQP 182 Query: 166 DCLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVD 225 DCLLV T+ D PL +G GTG L AVE A+ RQA ++GKPSPYMFQCITEDFSVD Sbjct: 183 DCLLVGTNMDNRLPLENGRFIAGTGCLVRAVEMAAQRQADIIGKPSPYMFQCITEDFSVD 242 Query: 226 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIAD 285 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIAD Sbjct: 243 PARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIAD 302 Query: 286 LMEGLED 292 LMEGLED Sbjct: 303 LMEGLED 309 >1PW5-A nrPDB Length = 253 Score = 253 bits (645), Expect = 1e-67, Method: Composition-based stats. Identities = 71/251 (28%), Positives = 122/251 (48%), Gaps = 14/251 (5%) Query: 15 VLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFAR 74 +L + + + D DG + + ++PG+ E L+ L K +F +NNS + + Sbjct: 1 MLDKIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRN 60 Query: 75 LGFAGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLAGDPG 134 +G + S + A +L++ +F+LG L+ A G + + Sbjct: 61 MGVDVPDDAVVTSGEITAEHMLKRF------GRCRIFLLGTPQLKKVFEAYGHVIDEE-- 112 Query: 135 EDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPLSDGSRTPGTGSLAA 194 V++G+D+ ++ RL +AC LR +AT D P +G P GS+ A Sbjct: 113 ---NPDFVVLGFDKTLTYERLKKACILLRK-GKFYIATHPDINCPSKEGP-VPDAGSIMA 167 Query: 195 AVETASGRQA-LVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLT 253 A+E ++GR+ L+ GKP+P + I+E F V R MVGDRL TD+ G G+ ++L Sbjct: 168 AIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILV 227 Query: 254 LTGVSSLEEAQ 264 LTG ++ E+ + Sbjct: 228 LTGETTPEDLE 238 >3PDW-A nrPDB Length = 266 Score = 252 bits (644), Expect = 1e-67, Method: Composition-based stats. Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 13/247 (5%) Query: 16 LGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARL 75 L +G L D DG ++NG + A E ++ L G LFV+NNS R ++A + Sbjct: 3 LKTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSF 62 Query: 76 GFAGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLAGDPGE 135 EQ+F++++ A+ + Q+ +V+V+G EG+R + GL G+ Sbjct: 63 DIPAT-EEQVFTTSMATAQHIAQQKK-----DASVYVIGEEGIRQAIEENGLTFGGE--- 113 Query: 136 DPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPLSDGSRTPGTGSLAAA 195 V+VG D ++ + C +R+ ++T+ D P G PG GSL + Sbjct: 114 --NADFVVVGIDRSITYEKFAVGCLAIRN-GARFISTNGDIAIPTERG-LLPGNGSLTSV 169 Query: 196 VETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLT 255 + ++G Q + +GKP + + D + TLMVGD TDI+ G GM T+L T Sbjct: 170 LTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHT 229 Query: 256 GVSSLEE 262 GV+ E Sbjct: 230 GVTKREH 236 >2C4N-A nrPDB Length = 250 Score = 246 bits (629), Expect = 6e-66, Method: Composition-based stats. Identities = 78/270 (28%), Positives = 125/270 (46%), Gaps = 25/270 (9%) Query: 18 QAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGF 77 + V+ D DGVL + VPGA E L + G + ++N + +LA RFA G Sbjct: 2 TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGV 61 Query: 78 AGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLAGDPGEDP 137 + ++SA+ A LR++ +V+G L EL AG + D Sbjct: 62 -DVPDSVFYTSAMATADFLRRQ------EGKKAYVVGEGALIHELYKAGFTIT-----DV 109 Query: 138 RVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPLSDG-SRTPGTGSLAAAV 196 V+VG +++ + +A A+ +AT+ D + G P G+L A + Sbjct: 110 NPDFVIVGETRSYNWDMMHKA-AYFVANGARFIATNPD-----THGRGFYPACGALCAGI 163 Query: 197 ETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTG 256 E SGR+ VGKPSP++ + T++VGD L TDIL G + G+ T+L L+G Sbjct: 164 EKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSG 223 Query: 257 VSSLEEAQAYLTAGQRDLVPHYYVESIADL 286 VSSL++ + P + S+A++ Sbjct: 224 VSSLDDIDS------MPFRPSWIYPSVAEI 247 >3HLT-A nrPDB Length = 266 Score = 230 bits (587), Expect = 4e-61, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 104/246 (42%), Gaps = 20/246 (8%) Query: 20 QGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAG 79 + VL D G L + VPGA E L+RL A FV+N ++ ++ +L R +L F Sbjct: 8 KAVLVDLSGTLHIEDAAVPGAQEALKRLRGASVIIRFVTNTTKESKQDLLERLRKLEF-D 66 Query: 80 LRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLAGDPGEDPRV 139 + +++F+S A LL ++ P + ++ L G DP Sbjct: 67 ISEDEIFTSLTAARSLLERKQVRP------MLLVDDRALP--------DFKGIQTSDPN- 111 Query: 140 RAVLVGY-DEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPLSDGSRTPGTGSLAAAVET 198 AV++G E F + L +A L D L+A + ++ DG G G A+E Sbjct: 112 -AVVMGLAPEHFHYQILNQAFRLLLD-GAPLIAIHKARYYKRKDGLAL-GPGPFVTALEY 168 Query: 199 ASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVS 258 A+ +A VVGKP F +P +M+GD D+ GM +L TG Sbjct: 169 ATDTKATVVGKPEKTFFLEALRGTGCEPEEAVMIGDDCRDDVGGAQDVGMLGILVKTGKY 228 Query: 259 SLEEAQ 264 + + Sbjct: 229 RASDEE 234 >2HO4-A nrPDB Length = 259 Score = 230 bits (586), Expect = 6e-61, Method: Composition-based stats. Identities = 67/246 (27%), Positives = 105/246 (42%), Gaps = 20/246 (8%) Query: 20 QGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRFARLGFAG 79 + VL D +G L + VPGA E L+RL FV+N ++ + +L R +L F Sbjct: 8 KAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFE- 66 Query: 80 LRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLAGDPGEDPRV 139 + +++F+S A L+ Q+ P + +L L G +DP Sbjct: 67 ISEDEIFTSLTAARNLIEQKQVRP------MLLLDDRALP--------EFTGVQTQDPN- 111 Query: 140 RAVLVGY-DEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPLSDGSRTPGTGSLAAAVET 198 AV++G E F + L +A L D L+A + ++ DG G G A+E Sbjct: 112 -AVVIGLAPEHFHYQLLNQAFRLLLD-GAPLIAIHKARYYKRKDGLAL-GPGPFVTALEY 168 Query: 199 ASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVS 258 A+ +A+VVGKP F D P +M+GD D+ GM +L TG Sbjct: 169 ATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKY 228 Query: 259 SLEEAQ 264 + + Sbjct: 229 KAADEE 234 >2X4D-A nrPDB Length = 271 Score = 213 bits (541), Expect = 1e-55, Method: Composition-based stats. Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 22/256 (8%) Query: 16 LGQAQGVLFDCDGVLWNGERIVPG----APELLQRLARAGKNTLFVSNNSRRARPELALR 71 L +GVL D GVL++ + E + RL R+ F +N S +R EL + Sbjct: 9 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQ 68 Query: 72 FARLGFAGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLAG 131 RLGF + +++ + A A ++L++R P ++L +G+R+E Sbjct: 69 LQRLGF-DISEQEVTAPAPAACQILKERGLRP-------YLLIHDGVRSEFDQID----- 115 Query: 132 DPGEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCL-LVATDRDPWHPLSDGSRTPGTG 190 +P V+ E FS+ + A L + + L++ + ++ + G G Sbjct: 116 --TSNPNC-VVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYAATSGLML-DVG 171 Query: 191 SLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTT 250 A+E A G +A VVGKPSP F+ + V+ + +M+GD + D+ RCGM Sbjct: 172 PYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRA 231 Query: 251 VLTLTGVSSLEEAQAY 266 + TG + Sbjct: 232 LQVRTGKFRPSDEHHP 247 >4I9G-A nrPDB Length = 361 Score = 212 bits (540), Expect = 1e-55, Method: Composition-based stats. Identities = 84/252 (33%), Positives = 125/252 (49%), Gaps = 14/252 (5%) Query: 12 LRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALR 71 ++ + + +L D DG ++ G + GA +Q L++ LFV+NN+ R+ E+A Sbjct: 9 MKSIAQEHDCLLIDLDGTVFCGRQPTGGA---VQSLSQVRSRKLFVTNNASRSADEVAAH 65 Query: 72 FARLGFAGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLAG 131 LGF E + +SA AA LL +L+ V ++G E L E+ A GLR Sbjct: 66 LCELGFTAT-GEDVVTSAQSAAHLLAGQLA----PGARVLIVGTEALANEVAAVGLRPVR 120 Query: 132 DPGEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPLSDGSRTPGTGS 191 + P AV+ G +S L EA +R L VA + DP P G PG GS Sbjct: 121 RFEDRPD--AVVQGLSMTTGWSDLAEAALAIR-AGALWVAANVDPTLPTERG-LLPGNGS 176 Query: 192 LAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTV 251 + AA+ TA+G V GKP+P + D L+VGDRL+TDI + G+ ++ Sbjct: 177 MVAALRTATGMDPRVAGKPAPALMTEAV--ARGDFRAALVVGDRLDTDIEGANAAGLPSL 234 Query: 252 LTLTGVSSLEEA 263 + LTGV+S +A Sbjct: 235 MVLTGVNSAWDA 246 >2GFH-A nrPDB Length = 260 Score = 116 bits (291), Expect = 1e-26, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 15/113 (13%) Query: 180 LSDGSRTPGTGSLAAAVETASGRQALVVG------KPSPYMFQCITEDFSVDPARTLMVG 233 L++G R + A S A+V+G KP+P +F + V P +MVG Sbjct: 142 LTNGDRQTQREKIEACA-CQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVG 200 Query: 234 DRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIADL 286 D LETDI G G+ + + + + LT+ +PHY V S+ +L Sbjct: 201 DTLETDIQGGLNAGLKATVWIN-----KSGRVPLTSSP---MPHYMVSSVLEL 245 >4KNV-A nrPDB Length = 241 Score = 113 bits (282), Expect = 1e-25, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 19/115 (16%) Query: 180 LSDGSRTPGTGSLAAAVETASGRQALVVG------KPSPYMFQCITEDFSVDPARTLMVG 233 L++G R + A S A+VVG KP+P +F V P +MVG Sbjct: 125 LTNGDRQTQREKIEACA-CQSYFDAVVVGGEQREEKPAPSIFYYCCNLLGVQPGDCVMVG 183 Query: 234 DRLETDILFGHRCGMTTVLT--LTGVSSLEEAQAYLTAGQRDLVPHYYVESIADL 286 D LETDI G G+ + G+ L+ + VPHY V S+ +L Sbjct: 184 DTLETDIQGGLNAGLKATVWINKNGIVPLKSSP----------VPHYMVSSVLEL 228 >2YY6-A nrPDB Length = 213 Score = 48.6 bits (114), Expect = 4e-06, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 35/92 (38%), Gaps = 8/92 (8%) Query: 191 SLAAAVETASGRQALVVG------KPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGH 244 + + + +V G KPSP E +P + L+VGD + DI G Sbjct: 113 KILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDT-DADIEAGK 171 Query: 245 RCGMTTVLTLTGVSSLEE-AQAYLTAGQRDLV 275 R G T L L G L + + DLV Sbjct: 172 RAGTKTALALWGYVKLNSQIPDFTLSRPSDLV 203 >3QUB-A nrPDB Length = 243 Score = 45.5 bits (106), Expect = 3e-05, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 85/273 (31%), Gaps = 63/273 (23%) Query: 8 RGAALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPE 67 RG+ +R + + VLFD DGVL+N +P E ++ + ++ +R E Sbjct: 16 RGSHMR---KKLKAVLFDMDGVLFNS---MPYHSEAWHQVMK--------THGLDLSREE 61 Query: 68 LALRFARLGFAGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGL 127 + R G ++ QR LG E + E+ + Sbjct: 62 AYMHAGRTG-------------ASTINIVFQRE------------LGKEATQEEIESIYH 96 Query: 128 RLAGDPGEDPRVRAVLVGYDEQFSFSRLTEACAHLRDPDC----LLVATDRDPWHPLSDG 183 + P R+ A L+ +V T L Sbjct: 97 EKSILFNSYPEA-------------ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLER- 142 Query: 184 SRTPGTGSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFG 243 G + + GKP+P + + + +++ + + G Sbjct: 143 LEHNFPGMFHKEL-MVTAFDVKY-GKPNPEPYLMALKKGGLKADEAVVI-ENAPLGVEAG 199 Query: 244 HRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVP 276 H+ G+ T+ TG + Q L AG L P Sbjct: 200 HKAGIFTIAVNTG---PLDGQVLLDAGADLLFP 229 >3KC2-A nrPDB Length = 352 Score = 44.0 bits (102), Expect = 8e-05, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 14/118 (11%) Query: 21 GVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNN---SRRARPELALRFARLGF 77 FD DGVL+ G++ + GA + L+ L R + ++N S RAR E ++L Sbjct: 15 AFAFDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFIS--SKLDV 72 Query: 78 AGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLAGDPGE 135 + + S + + +G +R G + + Sbjct: 73 DVSPLQIIQSHTP---------YKSLVNKYSRILAVGTPSVRGVAEGYGFQDVVHQTD 121 Score = 36.3 bits (82), Expect = 0.017, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 11/54 (20%) Query: 204 ALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGV 257 L+ KPS F + MVGD +DI+ G + L TGV Sbjct: 279 PLLGTKPSTSPFHAV-----------FMVGDNPASDIIGAQNYGWNSCLVKTGV 321 >4PNH-A nrPDB Length = 199 Score = 42.8 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 26/64 (40%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 209 KPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLT 268 KP P M + I E F +DPA T +VGD L D+ G G L LTG A L Sbjct: 119 KPMPGMMKLIAERFEIDPADTPVVGDSLR-DLQAGAALGFRPHLVLTGKGKKTLAAGGLP 177 Query: 269 AGQR 272 G R Sbjct: 178 EGTR 181 Score = 31.3 bits (69), Expect = 0.53, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 10/56 (17%) Query: 20 QGVLFDCDGVLWNGE----------RIVPGAPELLQRLARAGKNTLFVSNNSRRAR 65 + V+ D DGV+ +PG+ E + RL AG + +N S R Sbjct: 20 KLVVLDRDGVINVDSDAFVKSPDEWVALPGSLEAIARLNHAGYRVVVATNQSGIGR 75 >2HI0-A nrPDB Length = 240 Score = 39.7 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 5/71 (7%) Query: 189 TGSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGM 248 GS A+ SG + KP+P M + V + + +GD E DI M Sbjct: 149 PGSFDFALGEKSGIRR----KPAPDMTSECVKVLGVPRDKCVYIGDS-EIDIQTARNSEM 203 Query: 249 TTVLTLTGVSS 259 + G S Sbjct: 204 DEIAVNWGFRS 214 Score = 29.0 bits (63), Expect = 2.6, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 14/37 (37%) Query: 36 IVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRF 72 PG +L++ L + G VSN A L Sbjct: 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEEL 147 >1CR6-A nrPDB Length = 554 Score = 37.8 bits (86), Expect = 0.005, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 2/68 (2%) Query: 209 KPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLT 268 KP P ++ + + P + + D +++ GM T+L S+L E + +T Sbjct: 160 KPEPQIYNFLLDTLKAKPNEVVFL-DDFGSNLKPARDMGMVTILVHNTASALRELEK-VT 217 Query: 269 AGQRDLVP 276 Q P Sbjct: 218 GTQFPEAP 225 >3L8H-A nrPDB Length = 179 Score = 37.8 bits (86), Expect = 0.006, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Query: 209 KPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLT 268 KP P M++ I + VD A VGD L D+ + G L TG AQ L Sbjct: 101 KPLPGMYRDIARRYDVDLAGVPAVGDSLR-DLQAAAQAGCAPWLVQTGNGRKTLAQGGLP 159 Query: 269 AGQR 272 G R Sbjct: 160 EGTR 163 Score = 27.8 bits (60), Expect = 6.0, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 10/56 (17%) Query: 20 QGVLFDCDGVLWNGERI----------VPGAPELLQRLARAGKNTLFVSNNSRRAR 65 + ++ D DGV+ +PG+ + + RL +A + +N S AR Sbjct: 2 KLIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQADWTVVLATNQSGLAR 57 >3KBB-A nrPDB Length = 216 Score = 37.4 bits (85), Expect = 0.006, Method: Composition-based stats. Identities = 51/257 (19%), Positives = 81/257 (31%), Gaps = 56/257 (21%) Query: 20 QGVLFDCDGVLWNGERIVPGAPELLQRLARA-GKNTLFVSNNSRRARPELALRFARLGFA 78 + V+FD DGVL + E P E +R+A + GK +L R +G Sbjct: 2 EAVIFDMDGVLMDTE---PLYFEAYRRVAESYGKPY----------TEDLHRRI--MGVP 46 Query: 79 GLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLAGDPGEDPR 138 + AL L + VF + E+P Sbjct: 47 EREGLPILMEALEIKDSLENFKKRVHEEKKRVF------------------SELLKENP- 87 Query: 139 VRAVLVGYDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPLSDGSRTPGTGSLAAAVET 198 G E F + L AT L R L + Sbjct: 88 ------GVREALEFVKSKRIKLAL--------ATSTPQREALERLRRLD----LEKYFDV 129 Query: 199 ASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVS 258 + GKP P ++ + E +V P + ++ D ++ + G+ + + V Sbjct: 130 MVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDS-KSGVEAAKSAGIERIYGV--VH 186 Query: 259 SLEEAQAYLTAGQRDLV 275 SL + +A L AG LV Sbjct: 187 SLNDGKALLEAGAVALV 203 >2HSZ-A nrPDB Length = 243 Score = 37.0 bits (84), Expect = 0.010, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 5/67 (7%) Query: 209 KPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLT 268 KP P F + F + P + L VGD + DI H G V G++ + Sbjct: 170 KPHPAPFYYLCGKFGLYPKQILFVGDS-QNDIFAAHSAGCAVV----GLTYGYNYNIPIA 224 Query: 269 AGQRDLV 275 + D + Sbjct: 225 QSKPDWI 231 >1RQL-A nrPDB Length = 267 Score = 36.7 bits (83), Expect = 0.011, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 207 VGKPSPYMFQCITEDFSVDP-ARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSL 260 G+P P+M + V P + VGD + +D+ G GM TV + G S L Sbjct: 158 AGRPYPWMCYKNAMELGVYPMNHMIKVGDTV-SDMKEGRNAGMWTVGVILGSSEL 211 >4Y2Y-A nrPDB Length = 561 Score = 36.7 bits (83), Expect = 0.012, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Query: 209 KPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQ 264 KP P +++ + + P+ + + D + ++ GM T+L ++L+E + Sbjct: 160 KPEPQIYKFLLDTLKASPSEVVFL-DDIGANLKPARDLGMVTILVQDTDTALKELE 214 >2O2X-A nrPDB Length = 218 Score = 35.5 bits (80), Expect = 0.025, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 20/102 (19%) Query: 192 LAAAVETASGRQALVVG-----KPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRC 246 + A +G L + KP+P M + ++D R+L+VGD+L D+ G R Sbjct: 115 VLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLA-DMQAGKRA 173 Query: 247 GMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIADLME 288 G+ AQ +L G+ + P + + + D E Sbjct: 174 GL--------------AQGWLVDGEAAVQPGFAIRPLRDSSE 201 >5OLW-A nrPDB Length = 227 Score = 34.7 bits (78), Expect = 0.046, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 35/108 (32%), Gaps = 7/108 (6%) Query: 179 PLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFQCITEDFSVDPARTLMVGDRLET 238 +G +L + + + KP+P +F V P+ ++ + D Sbjct: 115 ASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAG 174 Query: 239 DILFGHRCGMTTVLTLTGVSSLEEAQAYLTAGQRDLVPHYYVESIADL 286 I G + GV E+ + HY +E + ++ Sbjct: 175 -IQAIKDSGALPI----GVGRPEDLGDDIVIVPD--TSHYTLEFLKEV 215 >3L8F-A nrPDB Length = 187 Score = 34.7 bits (78), Expect = 0.050, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 209 KPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGM-TTVLTLTGVSSLEEAQ 264 KP P M + +D A + MVGD+LE D+ + T VL TG EA+ Sbjct: 111 KPHPGMLLSARDYLHIDMAASYMVGDKLE-DMQAAVAANVGTKVLVRTGKPITPEAE 166 >3L1U-A nrPDB Length = 211 Score = 34.3 bits (77), Expect = 0.060, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Query: 209 KPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGM-TTVLTLTGVSSLEEAQ 264 KP P M + +D A + MVGD+LE D+ + T VL TG EA+ Sbjct: 131 KPHPGMLLSARDYLHIDMAASYMVGDKLE-DMQAAVAANVGTKVLVRTGKPITPEAE 186 >4G9B-A nrPDB Length = 243 Score = 34.3 bits (77), Expect = 0.063, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 1/53 (1%) Query: 209 KPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLE 261 KP P +F V P + + D I + GM +V G++ + Sbjct: 149 KPDPEIFLAACAGLGVPPQACIGIEDAQAG-IDAINASGMRSVGIGAGLTGAQ 200 >3ZWK-A nrPDB Length = 259 Score = 34.3 bits (77), Expect = 0.065, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%) Query: 22 VLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRR 63 V D DG L + + A E L+RL G + V+ +R+ Sbjct: 3 VFTDLDGTLLDERGELGPAREALERLRALGVPVVPVTAKTRK 44 >3OCV-A nrPDB Length = 262 Score = 32.4 bits (72), Expect = 0.22, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 32/114 (28%), Gaps = 10/114 (8%) Query: 27 DGVLWNG---ERIVPGAPELLQRLARAGKNTLFVSNNSRRARPE-LALRFARLGFAGLRA 82 D W R VPGA E + +V+N RLGF G+ Sbjct: 90 DWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE 149 Query: 83 EQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLAGDPGED 136 + +A+ + V +G L G + G D Sbjct: 150 SAFYLKKDKSAKA-ARFAEIEKQGYEIVLYVGDN-----LDDFGNTVYGKLNAD 197 >4DW8-A nrPDB Length = 279 Score = 32.4 bits (72), Expect = 0.23, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 1/63 (1%) Query: 18 QAQGVLFDCDGVLWNGERIVPG-APELLQRLARAGKNTLFVSNNSRRARPELALRFARLG 76 + + ++ D DG L N ++ + E L R+ G + S LA Sbjct: 4 KYKLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNE 63 Query: 77 FAG 79 F G Sbjct: 64 FGG 66 >4RN3-A nrPDB Length = 213 Score = 32.0 bits (71), Expect = 0.34, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%) Query: 209 KPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMT 249 KP P + E F + P L VGD E D L G+ Sbjct: 149 KPHPEPLLKVLEHFGIGPREALFVGDS-EVDRLSAEAAGVP 188 >2P9J-A nrPDB Length = 162 Score = 30.9 bits (68), Expect = 0.69, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 15/144 (10%) Query: 11 ALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQ--------RLARAGKNTLFVSNNSR 62 ALRD + + + ++ D DGVL +G+ E ++ + K + ++ S Sbjct: 1 ALRDRVKKLKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQKMGITLAVISG 60 Query: 63 RARPELALRFARLGFAGLRAEQLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAEL 122 R L R LG E++++ + + + + +G + + E+ Sbjct: 61 RDSAPLITRLKELGV-----EEIYTGSYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEV 115 Query: 123 -RAAGLRLAGDPG-EDPRVRAVLV 144 + G +A E+ R AV + Sbjct: 116 MKKVGFPVAVRNAVEEVRKVAVYI 139 >2HDO-A nrPDB Length = 209 Score = 29.7 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 1/56 (1%) Query: 209 KPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQ 264 KP P E +V P L +GD + +D + L + G+ + Q Sbjct: 138 KPDPLPLLTALEKVNVAPQNALFIGDSV-SDEQTAQAANVDFGLAVWGMDPNADHQ 192 >3IRU-A nrPDB Length = 277 Score = 29.7 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 17/104 (16%) Query: 205 LVVGKPSPYM-FQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVS----- 258 +V G+P P M + E + V D L I G R GM TV + Sbjct: 164 VVRGRPFPDMALKVALELEVGHVNGCIKVDDTLPG-IEEGLRAGMWTVGVSCSGNEVGLD 222 Query: 259 -------SLEEAQAYLTAGQRDLV---PHYYVESIADLMEGLED 292 S +E Q+Y ++ L HY ++S+ADL + D Sbjct: 223 REDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVITD 266 >3PCT-A nrPDB Length = 260 Score = 29.0 bits (63), Expect = 2.3, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 1/52 (1%) Query: 35 RIVPGAPELLQRLARAGKNTLFVSNNSRR-ARPELALRFARLGFAGLRAEQL 85 +PGA E + G FVSN + RLGF G+ + L Sbjct: 101 AAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTL 152 >4OIW-A nrPDB Length = 431 Score = 28.6 bits (62), Expect = 3.3, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 10/80 (12%) Query: 146 YDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQAL 205 DE+ ++ T ++ D L+A PL G R G + + + Sbjct: 40 LDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAATDSPCLRV------- 92 Query: 206 VVGKPSPYMFQCITEDFSVD 225 KP+P + + V+ Sbjct: 93 ---KPNPEIARNGFLQLGVE 109 >1GPJ-A nrPDB Length = 404 Score = 28.6 bits (62), Expect = 3.3, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 43/124 (34%), Gaps = 14/124 (11%) Query: 28 GVLWNGERIVPGAPEL----LQRLARAGKNTLFVSNNSRRARPELALRFARLGFAGLRAE 83 G L + +V GA E+ + L G + V+N + ELA LG +R + Sbjct: 163 GSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELA---RDLGGEAVRFD 219 Query: 84 QLFSSALCAARLLRQRLSGPPDASGAVFVLGGEGLRAELRAAGLRLAGDPGEDPRVRAVL 143 +L L + + V+ + +R LR R + R V Sbjct: 220 ELV-------DHLARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIANPRDVE 272 Query: 144 VGYD 147 G + Sbjct: 273 EGVE 276 >3N07-A nrPDB Length = 195 Score = 28.2 bits (61), Expect = 4.1, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 14/85 (16%) Query: 11 ALRDVLGQAQGVLFDCDGVLWNGERIVPGAPELLQR-----------LARAGKNTLFVSN 59 +L ++ Q + ++ D DGV +G + E L+ L AG ++ Sbjct: 17 SLLEIAKQIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNAGIEIAIITG 76 Query: 60 NSRRARPELALRFARLGFAGLRAEQ 84 R + R LG + + Q Sbjct: 77 ---RRSQIVENRMKALGISLIYQGQ 98 >1TE2-A nrPDB Length = 226 Score = 28.2 bits (61), Expect = 4.3, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 10/79 (12%) Query: 209 KPSPYMFQCITEDFSVDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSSLEEAQAYLT 268 KP P ++ VDP + + D + I M +++ EAQ Sbjct: 150 KPHPQVYLDCAAKLGVDPLTCVALEDSVNGMI-ASKAARMRSIVV-----PAPEAQ---- 199 Query: 269 AGQRDLVPHYYVESIADLM 287 R ++ + + S+ +L Sbjct: 200 NDPRFVLANVKLSSLTELT 218 >4OHF-A nrPDB Length = 470 Score = 28.2 bits (61), Expect = 4.8, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 31/109 (28%), Gaps = 14/109 (12%) Query: 146 YDEQFSFSRLTEACAHLRDPDCLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQAL 205 D+ + L E L + R +G+ T G + V + Sbjct: 228 LDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGTMTNVHGPIVPGVYQGGNAKKF 287 Query: 206 VVGKPSPYMFQCITEDFSVDPARTLMVGDRLETDIL-FGHRCGMTTVLT 253 TED V L +GD + DIL C T L Sbjct: 288 -------------TEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALV 323 >6DQX-A nrPDB Length = 574 Score = 27.8 bits (60), Expect = 5.9, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 15/28 (53%) Query: 41 PELLQRLARAGKNTLFVSNNSRRARPEL 68 +LLQR G LF +N+ RP++ Sbjct: 234 AKLLQRKTETGIPYLFFKDNANAGRPDV 261 >5HHZ-A nrPDB Length = 524 Score = 27.8 bits (60), Expect = 6.3, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%) Query: 34 ERIVPGAPELLQRLARAGKNTL-FVSNNSRRARPELALRFAR 74 +PGAPE L+ LAR + L F + A+ L AR Sbjct: 436 RSALPGAPESLEALARQNQRILDFCAGTGIGAKQYLPGHKAR 477 >2VOY-I nrPDB Length = 128 Score = 27.4 bits (59), Expect = 7.5, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 3/59 (5%) Query: 14 DVLGQAQGVLFDCDGVLWNGERIVPGAPELLQRLARAGKNTLFVSNNSRRARPELALRF 72 +V + V+FD G L ++ A +Q L R G ++ ++ R+ ++ Sbjct: 4 EVAEKVTAVIFDKTGTL---TKLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL 59 >4AP9-A nrPDB Length = 201 Score = 27.4 bits (59), Expect = 7.9, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 9/79 (11%) Query: 12 LRDVLGQAQGVLFDCD-GVLWNGERIV---PGAPELLQRLARAGKNTLFVSNNSRRARPE 67 L +L + G++ D G V P A EL++ L G + +S + E Sbjct: 53 LDSLLKRV-GLIRGIDEGTFLRTREKVNVSPEARELVETLREKGFKVVLISG----SFEE 107 Query: 68 LALRFARLGFAGLRAEQLF 86 + F LG + +F Sbjct: 108 VLEPFKELGDEFMANRAIF 126 >3IVR-A nrPDB Length = 509 Score = 27.0 bits (58), Expect = 9.2, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 9/68 (13%) Query: 163 RDPDCLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFQCITEDF 222 R P+ L+ T + +P ++A A+V+G P P + I Sbjct: 396 RAPEKELIKTGGENVYPAEVEGALKQHPAIA---------DAVVIGVPDPQWSEAIKAVC 446 Query: 223 SVDPARTL 230 P ++ Sbjct: 447 VCKPGESI 454 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.127 0.303 Lambda K H 0.267 0.0390 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,257,096 Number of Sequences: 36641 Number of extensions: 324694 Number of successful extensions: 1129 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 39 Number of HSP's that attempted gapping in prelim test: 1020 Number of HSP's gapped (non-prelim): 100 length of query: 292 length of database: 10,336,785 effective HSP length: 96 effective length of query: 196 effective length of database: 6,819,249 effective search space: 1336572804 effective search space used: 1336572804 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 58 (27.0 bits)