BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P60122 (456 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6QI8-A nrPDB 928 0.0 5FM7-A nrPDB 662 0.0 6GEJ-T nrPDB 653 0.0 2XSZ-A nrPDB 459 e-130 6QI9-D nrPDB 388 e-108 4WW4-B nrPDB 370 e-103 6GEJ-U nrPDB 353 7e-98 2XSZ-D nrPDB 190 1e-48 1XWI-A nrPDB 47 2e-05 2ZAO-A nrPDB 47 2e-05 1HQC-A nrPDB 47 2e-05 5UBV-A nrPDB 46 3e-05 1LV7-A nrPDB 45 5e-05 2CQA-A nrPDB 45 6e-05 2R65-A nrPDB 45 9e-05 1IN6-A nrPDB 44 2e-04 2CE7-A nrPDB 43 2e-04 6FVU-L nrPDB 43 3e-04 5WVI-L nrPDB 42 4e-04 6EF0-L nrPDB 42 6e-04 6CHS-H nrPDB 42 7e-04 6BLB-A nrPDB 42 8e-04 2X8A-A nrPDB 41 9e-04 6AZ0-A nrPDB 41 0.001 2QZ4-A nrPDB 41 0.001 2DHR-A nrPDB 41 0.001 3HU1-A nrPDB 40 0.002 5C18-A nrPDB 40 0.002 6MCK-A nrPDB 40 0.002 5XMK-A nrPDB 40 0.002 1IY1-A nrPDB 40 0.002 6AP1-A nrPDB 40 0.002 3EIH-A nrPDB 40 0.002 4LCB-A nrPDB 40 0.003 5OUN-A nrPDB 40 0.003 6HE9-H nrPDB 40 0.003 5VC7-A nrPDB 39 0.003 5VQ9-D nrPDB 39 0.003 4Z8X-A nrPDB 39 0.003 5G4G-A nrPDB 39 0.003 3M6A-A nrPDB 39 0.004 5Z6Q-A nrPDB 39 0.004 6B5C-A nrPDB 39 0.004 3PFI-A nrPDB 39 0.004 5WC0-A nrPDB 39 0.004 6HE4-H nrPDB 39 0.005 6EPC-H nrPDB 39 0.005 6B5D-A nrPDB 39 0.005 3H4M-A nrPDB 39 0.005 6NYV-B nrPDB 39 0.006 5VFP-B nrPDB 39 0.006 5VHF-B nrPDB 39 0.007 3WHK-A nrPDB 39 0.007 5WVI-K nrPDB 38 0.007 5VHO-B nrPDB 38 0.007 6MSK-B nrPDB 38 0.009 6EF1-K nrPDB 38 0.009 5ZQM-A nrPDB 38 0.009 4XGU-A nrPDB 38 0.010 4D81-A nrPDB 38 0.010 5T0C-AD nrPDB 37 0.014 1SXJ-A nrPDB 37 0.017 5EQT-A nrPDB 37 0.017 5VHP-E nrPDB 37 0.020 6MSD-E nrPDB 37 0.023 6MAT-A nrPDB 37 0.023 5VHN-D nrPDB 37 0.023 4LGM-A nrPDB 37 0.024 1IQP-A nrPDB 37 0.025 5GJQ-J nrPDB 36 0.027 2CHG-A nrPDB 36 0.030 2CHV-A nrPDB 36 0.031 5M32-h nrPDB 36 0.033 4ZPX-A nrPDB 36 0.036 5W0T-A nrPDB 36 0.041 3K1J-A nrPDB 36 0.041 6MDP-A nrPDB 36 0.044 5VHP-C nrPDB 36 0.044 3JCO-J nrPDB 35 0.053 1D2N-A nrPDB 35 0.059 6EF1-I nrPDB 35 0.060 6FVU-I nrPDB 35 0.074 5VFP-F nrPDB 35 0.078 6EPD-M nrPDB 35 0.084 6EF2-J nrPDB 35 0.084 6EF3-H nrPDB 35 0.084 5VHO-A nrPDB 35 0.085 3CF0-A nrPDB 35 0.086 6EF0-H nrPDB 35 0.094 3JCP-I nrPDB 35 0.10 5VFU-A nrPDB 34 0.10 5VHO-F nrPDB 34 0.11 5KWA-A nrPDB 34 0.12 3CM0-A nrPDB 34 0.13 5E7P-A nrPDB 33 0.18 3H0K-A nrPDB 33 0.25 1SXJ-D nrPDB 33 0.29 1SXJ-C nrPDB 32 0.41 1Y63-A nrPDB 32 0.54 4L16-A nrPDB 32 0.59 3Q8X-B nrPDB 32 0.62 3D8B-A nrPDB 32 0.68 5A5B-M nrPDB 32 0.71 1W49-A nrPDB 32 0.78 3PVS-A nrPDB 32 0.84 4YPN-A nrPDB 31 0.88 6EF0-M nrPDB 31 1.0 5BQ5-A nrPDB 31 1.0 4XGC-E nrPDB 30 1.7 3CRV-A nrPDB 30 1.9 1P4S-A nrPDB 30 2.0 4YPL-A nrPDB 30 2.1 2ZE6-A nrPDB 30 2.4 4RF9-A nrPDB 30 2.6 2R6A-A nrPDB 30 2.6 4NMN-A nrPDB 30 2.8 3GP8-A nrPDB 30 2.9 4I5O-A nrPDB 30 3.0 3W34-A nrPDB 30 3.2 5M7N-A nrPDB 29 4.0 3G5T-A nrPDB 29 4.0 5EYN-A nrPDB 29 4.5 6G2J-O nrPDB 29 5.4 2P6R-A nrPDB 28 6.2 1TMQ-A nrPDB 28 7.2 3PXI-A nrPDB 28 7.8 3PXG-A nrPDB 28 8.0 3J3U-A nrPDB 28 8.2 2Q6T-A nrPDB 28 9.3 >6QI8-A nrPDB Length = 456 Score = 928 bits (2399), Expect = 0.0, Method: Compositional matrix adjust. Identities = 455/456 (99%), Positives = 456/456 (100%) Query: 1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK 60 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK Sbjct: 1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK 60 Query: 61 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 120 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI Sbjct: 61 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 120 Query: 121 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL 180 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL Sbjct: 121 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL 180 Query: 181 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL 240 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL Sbjct: 181 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL 240 Query: 241 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAELVPGVLF 300 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQG+AELVPGVLF Sbjct: 241 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLF 300 Query: 301 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI 360 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI Sbjct: 301 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI 360 Query: 361 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN 420 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN Sbjct: 361 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN 420 Query: 421 GKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK 456 GKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK Sbjct: 421 GKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK 456 >5FM7-A nrPDB Length = 464 Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust. Identities = 306/447 (68%), Positives = 383/447 (85%) Query: 1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK 60 ++I EV+ T+ R A+H+H+KGLGL+ SG+A++ A+G VGQ AREACGV+V+LIK+ K Sbjct: 4 VQISEVRGNTRDHRTAAHTHIKGLGLNSSGIAEKQAAGFVGQCAAREACGVVVDLIKAHK 63 Query: 61 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 120 MAGR VLLAG PGTGKTALALAI+QELG+K+PFCP+ GSE+YSTE+KKTEVLMENFRRAI Sbjct: 64 MAGRGVLLAGGPGTGKTALALAISQELGTKIPFCPITGSEIYSTEVKKTEVLMENFRRAI 123 Query: 121 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL 180 GLR++ETK+VYEGEVTE+TP E ENP+GGYGKTIS ++IGLK+A+G K+L+LDPSI+E++ Sbjct: 124 GLRVRETKDVYEGEVTEMTPEEAENPLGGYGKTISTLLIGLKSARGQKKLRLDPSIYEAI 183 Query: 181 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL 240 QKERV+ GDVIYIE N+GA KR GR D YATEFDLEAEEYVP+PKG+VHKKKEI+QDVTL Sbjct: 184 QKERVQVGDVIYIETNTGACKRVGRSDAYATEFDLEAEEYVPIPKGEVHKKKEIVQDVTL 243 Query: 241 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAELVPGVLF 300 HDLDVANARPQGGQDI+SMMGQLMKPK TEITDKLR EINKVV KYI+QGVAEL+PGVLF Sbjct: 244 HDLDVANARPQGGQDIISMMGQLMKPKMTEITDKLRMEINKVVQKYINQGVAELIPGVLF 303 Query: 301 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI 360 +DE HMLDIECFTYL++ALES IAPIV+ ASNRG IRG +D+ + HGIP D L R++I Sbjct: 304 IDEAHMLDIECFTYLNKALESPIAPIVVLASNRGIATIRGADDLKAAHGIPPDFLQRLLI 363 Query: 361 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN 420 I T Y P E+++I++IRAQTEG+ +++ A++ + E G + +LRY +QLL PA++LA++N Sbjct: 364 IPTHPYEPDEIRRIVRIRAQTEGVQLTDAAVDRVAEHGVRISLRYCLQLLAPASILARVN 423 Query: 421 GKDSIEKEHVEEISELFYDAKSSAKIL 447 G+ ++ + + E ELF DA+ SA IL Sbjct: 424 GRTQVDVQDIAEAEELFLDARRSANIL 450 >6GEJ-T nrPDB Length = 463 Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust. Identities = 308/434 (70%), Positives = 370/434 (85%) Query: 14 RIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPG 73 R A+H+H+KGLGLDESG+AK+ G VGQ AREACGVIV+LIK+KKM+GRA+LLAG P Sbjct: 23 RTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPS 82 Query: 74 TGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEG 133 TGKTALALAI+QELG KVPFCP+VGSE+YS E+KKTE LMENFRRAIGLRIKETKEVYEG Sbjct: 83 TGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYEG 142 Query: 134 EVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYI 193 EVTELTP + ENP+GGYGKTISHVI+GLK+AKGTK L+LDP+I+ES+Q+E+V GDVIYI Sbjct: 143 EVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESIQREKVSIGDVIYI 202 Query: 194 EANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGG 253 EAN+GAVKR GR D YATEFDLE EEYVPLPKG+VHKKKEI+QDVTLHDLDVANARPQGG Sbjct: 203 EANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHKKKEIVQDVTLHDLDVANARPQGG 262 Query: 254 QDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAELVPGVLFVDEVHMLDIECFT 313 QD++SMMGQL+KPKKTEIT+KLR E+NKVV KYIDQGVAEL+PGVLF+DEV+MLDIE FT Sbjct: 263 QDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGVAELIPGVLFIDEVNMLDIEIFT 322 Query: 314 YLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQ 373 YL++ALES+IAP+V+ ASNRG +RGTED+ SPHG+P DL+DR++I+RT+ Y E++ Sbjct: 323 YLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVPPDLIDRLLIVRTLPYDKDEIRT 382 Query: 374 IIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEI 433 II+ RA E + + AL+ L +GT+T+LRY++QLL P +LA+ + + I V E Sbjct: 383 IIERRATVERLQVESSALDLLATMGTETSLRYALQLLAPCGILAQTSNRKEIVVNDVNEA 442 Query: 434 SELFYDAKSSAKIL 447 LF DAK S KIL Sbjct: 443 KLLFLDAKRSTKIL 456 >2XSZ-A nrPDB Length = 367 Score = 459 bits (1182), Expect = e-130, Method: Compositional matrix adjust. Identities = 222/223 (99%), Positives = 223/223 (100%) Query: 234 IIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAE 293 IIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQG+AE Sbjct: 145 IIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAE 204 Query: 294 LVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLD 353 LVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLD Sbjct: 205 LVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLD 264 Query: 354 LLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPA 413 LLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPA Sbjct: 265 LLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPA 324 Query: 414 NLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK 456 NLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK Sbjct: 325 NLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK 367 Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%) Query: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM Sbjct: 16 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 75 Query: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIG 121 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIG Sbjct: 76 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIG 135 Query: 122 LRIKE 126 LRIKE Sbjct: 136 LRIKE 140 >6QI9-D nrPDB Length = 463 Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust. Identities = 195/456 (42%), Positives = 301/456 (66%), Gaps = 15/456 (3%) Query: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61 K+ E++ T+ +RI +HSH++GLGLD++ +QA+ G+VGQ AR A GV++E+I+ K+ Sbjct: 9 KVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKI 68 Query: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIG 121 AGRAVL+AG PGTGKTA+A+ +AQ LG PF + GSE++S E+ KTE L + FRR+IG Sbjct: 69 AGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIG 128 Query: 122 LRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQ 181 +RIKE E+ EGEV E+ + + P G G + + LKT + L + ESL Sbjct: 129 VRIKEETEIIEGEVVEI---QIDRPATGTGSKVGKLT--LKTTEMETIYDLGTKMIESLT 183 Query: 182 KERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEE--YVPLPKGDVHKKKEIIQDVT 239 K++V+AGDVI I+ +G + + GR T A ++D + +V P G++ K+KE++ V+ Sbjct: 184 KDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVS 243 Query: 240 LHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAELVPGVL 299 LH++DV N+R QG L EI ++R +IN V ++ ++G AE++PGVL Sbjct: 244 LHEIDVINSRTQG-------FLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVL 296 Query: 300 FVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVM 359 F+DEVHMLDIE F++L+RALES +AP++I A+NRG IRGT SPHGIP+DLLDR++ Sbjct: 297 FIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGT-SYQSPHGIPIDLLDRLL 355 Query: 360 IIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKI 419 I+ T Y+ ++ KQI++IR + E + +SE+A L IG +T+LRY++QL+T A+L+ + Sbjct: 356 IVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRK 415 Query: 420 NGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYM 455 ++ + ++ + LF D S + + + QD ++ Sbjct: 416 RKGTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFL 451 >4WW4-B nrPDB Length = 513 Score = 370 bits (951), Expect = e-103, Method: Compositional matrix adjust. Identities = 199/458 (43%), Positives = 291/458 (63%), Gaps = 21/458 (4%) Query: 3 IEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAAS-GLVGQENAREACGVIVELIKSKKM 61 + E K IA+HSH++GLG+D L + +S GLVGQE AR+A V++E+IK K+ Sbjct: 34 VTETKELRGLNLIAAHSHIRGLGVDADTLEPRPSSQGLVGQEKARKAAAVVLEMIKQGKI 93 Query: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIG 121 AGRAVL+AGPP TGKTA+A+ +AQ LG VPF + SE++S E+ KTE L + FR++IG Sbjct: 94 AGRAVLIAGPPSTGKTAIAMGMAQSLGQDVPFTTLAASEIFSLEMSKTEALTQAFRKSIG 153 Query: 122 LRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQ 181 +RIKE E+ EGEV E+ + GK + +KT + + +++ Sbjct: 154 VRIKEESEIMEGEVVEIQIDRSVTGGAKQGK------LTIKTTDMEAIYDMGSKMIDAMT 207 Query: 182 KERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEA----EEYVPLPKGDVHKKKEIIQD 237 KERV AGD+I I+ +SG + + GR +YA D +A +++ P+G++ K+KE++ Sbjct: 208 KERVMAGDIISIDKSSGKITKLGR--SYARSRDYDAMGVDTKFLQCPEGELQKRKEVVHT 265 Query: 238 VTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAELVPG 297 V+LH++DV N+R QG L EI ++R +IN V ++ ++G AE+VPG Sbjct: 266 VSLHEIDVINSRTQG-------FLALFSGDTGEIRSEIRDQINTKVAEWKEEGKAEIVPG 318 Query: 298 VLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDR 357 VLF+DEVHMLDIECF+Y++RALES +APIVI ASNRG IRGT D SPHG+PLD LDR Sbjct: 319 VLFIDEVHMLDIECFSYINRALESDLAPIVIMASNRGVSRIRGT-DYKSPHGLPLDFLDR 377 Query: 358 VMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLA 417 V+II T YTP E++QI+ IRAQ E ++++ +AL L +IG + LRY+ L+T + L+A Sbjct: 378 VVIINTHPYTPDELRQILSIRAQEEEVDLTPDALALLTKIGQEAGLRYASNLITTSQLIA 437 Query: 418 KINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYM 455 + E V+ +LFYD S + + + + + + Sbjct: 438 AKRRAKQVGVEDVQRSFKLFYDPARSVRFVQESEKRLI 475 >6GEJ-U nrPDB Length = 471 Score = 353 bits (907), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 190/445 (42%), Positives = 284/445 (63%), Gaps = 20/445 (4%) Query: 15 IASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGT 74 IA+HSH+ GLGLDE+ + + G+VGQ AR A GVI++++++ +AGRAVL+AGPP T Sbjct: 20 IAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPST 79 Query: 75 GKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGE 134 GKTALA+ ++Q LG VPF + GSE++S E+ KTE L + FR++IG++IKE E+ EGE Sbjct: 80 GKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIKIKEETELIEGE 139 Query: 135 VTELTPCETENPMGGY--GKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIY 192 V E+ + GG+ GK + +KT +L + + L KE+V AGDVI Sbjct: 140 VVEIQI--DRSITGGHKQGK------LTIKTTDMETIYELGNKMIDGLTKEKVLAGDVIS 191 Query: 193 IEANSGAVKRQGRCDTYATEFDLEAEE--YVPLPKGDVHKKKEIIQDVTLHDLDVANARP 250 I+ SG + + GR + ++D + +V P+G++ K+K ++ V+LH++DV N+R Sbjct: 192 IDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVSLHEIDVINSRT 251 Query: 251 QGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAELVPGVLFVDEVHMLDIE 310 QG L EI ++R +IN V ++ ++G AE+VPGVLF+DEVHMLDIE Sbjct: 252 QG-------FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIE 304 Query: 311 CFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQE 370 CF++++RALE APIV+ A+NRG RGT + SPHG+PLDLLDR +II T Y QE Sbjct: 305 CFSFINRALEDEFAPIVMMATNRGVSKTRGT-NYKSPHGLPLDLLDRSIIITTKSYNEQE 363 Query: 371 MKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHV 430 +K I+ IRAQ E + +S +AL+ L + G +T+LRYS L++ A +A +++E E V Sbjct: 364 IKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEVEDV 423 Query: 431 EEISELFYDAKSSAKILADQQDKYM 455 + LF D+ S K + + + +Y+ Sbjct: 424 KRAYLLFLDSARSVKYVQENESQYI 448 >2XSZ-D nrPDB Length = 378 Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 92/222 (41%), Positives = 147/222 (66%), Gaps = 8/222 (3%) Query: 234 IIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAE 293 ++ V+LH++DV N+R QG L EI ++R +IN V ++ ++G AE Sbjct: 153 VVHTVSLHEIDVINSRTQG-------FLALFSGDTGEIKSEVREQINAKVAEWREEGKAE 205 Query: 294 LVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLD 353 ++PGVLF+DEVHMLDIE F++L+RALES +AP++I A+NRG IRGT SPHGIP+D Sbjct: 206 IIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTS-YQSPHGIPID 264 Query: 354 LLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPA 413 LLDR++I+ T Y+ ++ KQI++IR + E + +SE+A L IG +T+LRY++QL+T A Sbjct: 265 LLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAA 324 Query: 414 NLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYM 455 +L+ + ++ + ++ + LF D S + + + QD ++ Sbjct: 325 SLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFL 366 Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 67/125 (53%), Positives = 96/125 (76%) Query: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61 K+ E++ T+ +RI +HSH++GLGLD++ +QA+ G+VGQ AR A GV++E+I+ K+ Sbjct: 24 KVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKI 83 Query: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIG 121 AGRAVL+AG PGTGKTA+A+ +AQ LG PF + GSE++S E+ KTE L + FRR+IG Sbjct: 84 AGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIG 143 Query: 122 LRIKE 126 +RIKE Sbjct: 144 VRIKE 148 >1XWI-A nrPDB Length = 322 Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 12/117 (10%) Query: 37 SGLVGQENAREAC--GVIV-----ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGS 89 S + G E A+EA VI+ L K+ R +LL GPPGTGK+ LA A+A E + Sbjct: 12 SDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANN 71 Query: 90 KVPFCPMVGSEVYSTEIKKTEVLMEN-FRRAIGLRIKETKEVYEGEVTELTPCETEN 145 F + S++ S + ++E L++N F+ A R + ++ E+ L +EN Sbjct: 72 ST-FFSISSSDLVSKWLGESEKLVKNLFQLA---RENKPSIIFIDEIDSLCGSRSEN 124 >2ZAO-A nrPDB Length = 444 Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 12/117 (10%) Query: 37 SGLVGQENAREAC--GVIV-----ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGS 89 S + G E A+EA VI+ L K+ R +LL GPPGTGK+ LA A+A E + Sbjct: 134 SDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANN 193 Query: 90 KVPFCPMVGSEVYSTEIKKTEVLMEN-FRRAIGLRIKETKEVYEGEVTELTPCETEN 145 F + S++ S + ++E L++N F+ A R + ++ E+ L +EN Sbjct: 194 ST-FFSISSSDLVSKWLGESEKLVKNLFQLA---RENKPSIIFIDEIDSLCGSRSEN 246 >1HQC-A nrPDB Length = 324 Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 20/159 (12%) Query: 277 GEINKVVNKYIDQGVAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNC 336 G++ ++ +++G +LF+DE+H L + +L+ A+E + IVI Sbjct: 78 GDLAAILANSLEEG------DILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAART 131 Query: 337 V---------IRGTEDITSPHGIPLDLLDRVMIIRTM-LYTPQEMKQIIKIRAQTEGINI 386 + I T T P I LL R I+ + YTP+E+ Q + A+ G+ I Sbjct: 132 IRLELPRFTLIGAT---TRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRI 188 Query: 387 SEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSI 425 +EEA +G ++ T+R + +L A++ G++ I Sbjct: 189 TEEAALEIGR-RSRGTMRVAKRLFRRVRDFAQVAGEEVI 226 Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/49 (46%), Positives = 30/49 (61%) Query: 40 VGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELG 88 +GQE ++ V +E K++K +LL GPPG GKT LA IA ELG Sbjct: 15 IGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELG 63 >5UBV-A nrPDB Length = 246 Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 9/67 (13%) Query: 41 GQENAREACGVIVELIKS----KKMAGR---AVLLAGPPGTGKTALALAIAQELGSKVPF 93 G + A+E +VE +++ + G+ VLL GPPGTGKT LA A+A E G VPF Sbjct: 10 GCDEAKEELQELVEFLRNPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAG--VPF 67 Query: 94 CPMVGSE 100 M GSE Sbjct: 68 FYMSGSE 74 >1LV7-A nrPDB Length = 257 Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 24/116 (20%) Query: 33 KQAASGLVGQENAREACGVIVELIKS----KKMAGR---AVLLAGPPGTGKTALALAIAQ 85 K + + G + A+E +VE ++ +K+ G+ VL+ GPPGTGKT LA AIA Sbjct: 8 KTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAG 67 Query: 86 ELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPC 141 E +KVPF + GS+ +E F +G+ ++++E + + PC Sbjct: 68 E--AKVPFFTISGSD-----------FVEMF---VGVGASRVRDMFE-QAKKAAPC 106 >2CQA-A nrPDB Length = 95 Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 5/86 (5%) Query: 125 KETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKER 184 KE E+ EGEV E+ + + P G G + + LKT + L + ESL K++ Sbjct: 8 KEETEIIEGEVVEI---QIDRPATGTGSKVGKLT--LKTTEMETIYDLGTKMIESLTKDK 62 Query: 185 VEAGDVIYIEANSGAVKRQGRCDTYA 210 V+AGDVI I+ +G + + GR T A Sbjct: 63 VQAGDVITIDKATGKISKLGRSFTRA 88 >2R65-A nrPDB Length = 268 Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 9/68 (13%) Query: 39 LVGQENAREACGVIVELIKSKKMAG-------RAVLLAGPPGTGKTALALAIAQELGSKV 91 + G E A+E IV+ +K + + VLL GPPGTGKT LA A+A E + V Sbjct: 13 MAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGE--AHV 70 Query: 92 PFCPMVGS 99 PF M GS Sbjct: 71 PFFSMGGS 78 >1IN6-A nrPDB Length = 334 Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 31/53 (58%) Query: 39 LVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKV 91 +GQEN ++ + +E K + VLLAGPPG G+T LA IA EL + + Sbjct: 27 FIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGRTTLAHIIASELQTNI 79 >2CE7-A nrPDB Length = 476 Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/67 (41%), Positives = 35/67 (52%), Gaps = 9/67 (13%) Query: 41 GQENAREACGVIVELIKSKKMAGR-------AVLLAGPPGTGKTALALAIAQELGSKVPF 93 G E A E +VE +K R +LL GPPGTGKT LA A+A E + VPF Sbjct: 20 GAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGE--ANVPF 77 Query: 94 CPMVGSE 100 + GS+ Sbjct: 78 FHISGSD 84 >6FVU-L nrPDB Length = 388 Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 19/35 (54%), Positives = 23/35 (65%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVG 98 + VLL GPPGTGKT LA A+A +G+ F P G Sbjct: 168 KGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASG 202 >5WVI-L nrPDB Length = 437 Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 19/35 (54%), Positives = 23/35 (65%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVG 98 + VLL GPPGTGKT LA A+A +G+ F P G Sbjct: 216 KGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASG 250 >6EF0-L nrPDB Length = 273 Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 19/35 (54%), Positives = 23/35 (65%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVG 98 + VLL GPPGTGKT LA A+A +G+ F P G Sbjct: 53 KGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASG 87 >6CHS-H nrPDB Length = 819 Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 120 R VLL GPPGTGKT +A A+A E G+ F + G E+ S ++E N R+A Sbjct: 255 RGVLLYGPPGTGKTLMARAVANETGAF--FFLINGPEIMSKMAGESE---SNLRKAF 306 Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTE 110 R VL GPPGTGKT LA A+A E + F + G E+ S ++E Sbjct: 529 RGVLFYGPPGTGKTMLAKAVANECAAN--FISVKGPELLSMWFGESE 573 >6BLB-A nrPDB Length = 355 Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 30/52 (57%) Query: 40 VGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKV 91 +GQ + RE + + + ++ A L+ GPPG GKT LA IAQE+G + Sbjct: 36 IGQPSVREQMELFIHAARGRQEALDHTLIFGPPGLGKTTLANIIAQEMGVSI 87 >2X8A-A nrPDB Length = 274 Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 6/106 (5%) Query: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTE-VLMENFRRAIGLRI 124 VLLAGPPG GKT LA A+A E G + F + G E+ + + ++E + + F+RA + Sbjct: 47 VLLAGPPGCGKTLLAKAVANESG--LNFISVKGPELLNMYVGESERAVRQVFQRA---KN 101 Query: 125 KETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQL 170 ++ EV L P ++ G + ++ ++ + + +Q+ Sbjct: 102 SAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQV 147 >6AZ0-A nrPDB Length = 439 Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust. Identities = 30/70 (42%), Positives = 37/70 (52%), Gaps = 9/70 (12%) Query: 39 LVGQENAREACGVIVELIKS----KKMAGR---AVLLAGPPGTGKTALALAIAQELGSKV 91 + G + AR IV+ +K + + G+ VLL GPPGTGKT LA A A E G V Sbjct: 5 VCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGEAG--V 62 Query: 92 PFCPMVGSEV 101 F M GSE Sbjct: 63 DFFFMSGSEF 72 >2QZ4-A nrPDB Length = 262 Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + LL GPPG GKT LA A+A E ++VPF M G+E Sbjct: 40 KGALLLGPPGCGKTLLAKAVATE--AQVPFLAMAGAEF 75 >2DHR-A nrPDB Length = 499 Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 9/56 (16%) Query: 52 IVELIKS----KKMAGR---AVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSE 100 IVE +K+ +M R VLL GPPG GKT LA A+A E ++VPF GS+ Sbjct: 46 IVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGE--ARVPFITASGSD 99 >3HU1-A nrPDB Length = 489 Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 120 R +LL GPPGTGKT +A A+A E G+ F + G E+ S ++E N R+A Sbjct: 239 RGILLYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGESE---SNLRKAF 290 >5C18-A nrPDB Length = 785 Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 120 R +LL GPPGTGKT +A A+A E G+ F + G E+ S ++E N R+A Sbjct: 238 RGILLYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGESE---SNLRKAF 289 Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 54 ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTE 110 + +K + VL GPPG GKT LA AIA E + F + G E+ + ++E Sbjct: 501 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESE 555 >6MCK-A nrPDB Length = 606 Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 120 R +LL GPPGTGKT +A A+A E G+ F + G E+ S ++E N R+A Sbjct: 31 RGILLYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGESE---SNLRKAF 82 Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 54 ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTE 110 + +K + VL GPPG GKT LA AIA E + F + G E+ + ++E Sbjct: 294 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESE 348 >5XMK-A nrPDB Length = 437 Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 9/85 (10%) Query: 39 LVGQENAREAC--GVIV-----ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKV 91 + G E A+EA VI+ L K + +LL GPPGTGK+ LA A+A E S Sbjct: 135 VAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANST- 193 Query: 92 PFCPMVGSEVYSTEIKKTEVLMENF 116 F + S++ S + ++E L++ Sbjct: 194 -FFSVSSSDLVSKWMGESEKLVKQL 217 >1IY1-A nrPDB Length = 254 Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 9/56 (16%) Query: 52 IVELIKSK----KMAGR---AVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSE 100 IVE +K+ +M R VLL GPPG GKT LA A+A E ++VPF GS+ Sbjct: 31 IVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGE--ARVPFITASGSD 84 >6AP1-A nrPDB Length = 519 Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 9/85 (10%) Query: 39 LVGQENAREAC--GVIV-----ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKV 91 + G E A+EA VI+ L K + +LL GPPGTGK+ LA A+A E S Sbjct: 36 VAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANST- 94 Query: 92 PFCPMVGSEVYSTEIKKTEVLMENF 116 F + S++ S + ++E L++ Sbjct: 95 -FFSVSSSDLVSKWMGESEKLVKQL 118 >3EIH-A nrPDB Length = 340 Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 9/85 (10%) Query: 39 LVGQENAREAC--GVIV-----ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKV 91 + G E A+EA VI+ L K + +LL GPPGTGK+ LA A+A E S Sbjct: 38 VAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANST- 96 Query: 92 PFCPMVGSEVYSTEIKKTEVLMENF 116 F + S++ S + ++E L++ Sbjct: 97 -FFSVSSSDLVSKWMGESEKLVKQL 120 >4LCB-A nrPDB Length = 367 Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 7/63 (11%) Query: 33 KQAASGLVGQENAREACGVIVELIKSKKM------AGRAVLLAGPPGTGKTALALAIAQE 86 K + S +VG ++ +EA + + SK+ R +LL GPPG GKT LA A+A E Sbjct: 95 KVSFSDIVGLDDVKEALKEAI-IYPSKRPDLFPLGWPRGILLYGPPGNGKTMLAAAVANE 153 Query: 87 LGS 89 + S Sbjct: 154 IDS 156 >5OUN-A nrPDB Length = 107 Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%) Query: 172 LDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEE--YVPLPKGDVH 229 L + + L KE+V AGDVI I+ SG + + GR + ++D + +V P+G++ Sbjct: 44 LGNKMIDGLTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQ 103 Query: 230 KKK 232 K+K Sbjct: 104 KRK 106 >6HE9-H nrPDB Length = 390 Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 2/37 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSE 100 + VLL GPPGTGKT LA A+A + ++ F +VGSE Sbjct: 168 KGVLLYGPPGTGKTLLAKAVANQ--TRATFIRVVGSE 202 >5VC7-A nrPDB Length = 564 Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEV-LMENFRRA 119 + V+L GPPGTGKT +A A+A E G+ F + G E+ S ++E L E F +A Sbjct: 44 KGVILYGPPGTGKTLIARAVANESGAN--FLSINGPEIMSKYYGQSEQKLREIFSKA 98 Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTE-VLMENFRRA 119 + LL GPPG GKT LA A+A E S F + G EV S + ++E + E F++A Sbjct: 321 KGFLLYGPPGVGKTLLAKAVATE--SNANFISIKGPEVLSKWVGESEKAIREIFKKA 375 >5VQ9-D nrPDB Length = 432 Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust. Identities = 17/25 (68%), Positives = 20/25 (80%) Query: 63 GRAVLLAGPPGTGKTALALAIAQEL 87 R VLL GPPGTGKT+L A+AQ+L Sbjct: 172 NRVVLLHGPPGTGKTSLCKALAQKL 196 >4Z8X-A nrPDB Length = 497 Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 5/48 (10%) Query: 56 IKSKKMAGR---AVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSE 100 +K +K+ GR VLL G PG GKT LA AIA E + VPF + GS+ Sbjct: 41 VKFQKLGGRPPKGVLLYGEPGVGKTLLAKAIAGE--AHVPFISVSGSD 86 >5G4G-A nrPDB Length = 721 Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEV-LMENFRRA 119 + V+L GPPGTGKT +A A+A E G+ F + G E+ S ++E L E F +A Sbjct: 220 KGVILYGPPGTGKTLIARAVANESGAN--FLSINGPEIMSKYYGQSEQKLREIFSKA 274 Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 3/57 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTE-VLMENFRRA 119 + LL GPPG GKT LA A+A E S F + G EV S + ++E + E F++A Sbjct: 497 KGFLLYGPPGVGKTLLAKAVATE--SNANFISIKGPEVLSKWVGESEKAIREIFKKA 551 >3M6A-A nrPDB Length = 543 Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust. Identities = 18/33 (54%), Positives = 24/33 (72%) Query: 58 SKKMAGRAVLLAGPPGTGKTALALAIAQELGSK 90 +K + G + LAGPPG GKT+LA +IA+ LG K Sbjct: 103 TKSLKGPILCLAGPPGVGKTSLAKSIAKSLGRK 135 >5Z6Q-A nrPDB Length = 392 Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 9/82 (10%) Query: 39 LVGQENAREACGVIV-------ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKV 91 + GQ+ A++A IV EL + R +LL GPPG GKT LA A+A E S Sbjct: 120 IAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAE--SNA 177 Query: 92 PFCPMVGSEVYSTEIKKTEVLM 113 F + + + S + + E L+ Sbjct: 178 TFFNISAASLTSKYVGEGEKLV 199 >6B5C-A nrPDB Length = 307 Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 23/36 (63%) Query: 54 ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGS 89 + K + + VL+ GPPGTGKT LA A+A E G+ Sbjct: 49 DFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGT 84 >3PFI-A nrPDB Length = 338 Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%) Query: 28 ESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQEL 87 E+ L G +GQE+ ++ V + K + +L +GP G GKT LA I+ E+ Sbjct: 20 ETSLRPSNFDGYIGQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTTLANIISYEM 79 Query: 88 GS--KVPFCPMV 97 + K PM+ Sbjct: 80 SANIKTTAAPMI 91 >5WC0-A nrPDB Length = 472 Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 51 VIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQE 86 ++ E + + +A++LAGPPGTGKT +A AIA E Sbjct: 214 LVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASE 249 >6HE4-H nrPDB Length = 267 Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 2/37 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSE 100 + VLL GPPGTGKT LA A+A + ++ F +VGSE Sbjct: 54 KGVLLYGPPGTGKTLLAKAVANQ--TRATFIRVVGSE 88 >6EPC-H nrPDB Length = 433 Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + VLL GPPGTGKT A A+A + F P++GSE+ Sbjct: 210 KGVLLFGPPGTGKTLCARAVANR--TDACFIPVIGSEL 245 >6B5D-A nrPDB Length = 309 Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 51 VIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQE 86 ++ E + + +A++LAGPPGTGKT +A AIA E Sbjct: 51 LVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASE 86 >3H4M-A nrPDB Length = 285 Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + +LL GPPGTGKT LA A+A E + F +VGSE+ Sbjct: 52 KGILLYGPPGTGKTLLAKAVATE--TNATFIRVVGSEL 87 >6NYV-B nrPDB Length = 314 Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 9/70 (12%) Query: 26 LDE--SGLAKQAASGLVGQENAREACGVIV-------ELIKSKKMAGRAVLLAGPPGTGK 76 LDE G AK + + GQ+ A++A +V EL + + +LL GPPG GK Sbjct: 26 LDEIVEGGAKVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGK 85 Query: 77 TALALAIAQE 86 T LA A+A E Sbjct: 86 TLLARAVATE 95 >5VFP-B nrPDB Length = 389 Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + V+L GPPGTGKT LA A+A + + F +VGSE+ Sbjct: 169 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSEL 204 >5VHF-B nrPDB Length = 340 Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + V+L GPPGTGKT LA A+A + + F +VGSE+ Sbjct: 128 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSEL 163 >3WHK-A nrPDB Length = 270 Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust. Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + VLL GPPG GKT +A AIA E+ + F +VGSE+ Sbjct: 52 KGVLLYGPPGCGKTLMAKAIAHEVNAT--FIRVVGSEL 87 >5WVI-K nrPDB Length = 428 Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSE 100 R VLL GPPGTGKT L A+A +K F + GSE Sbjct: 207 RGVLLYGPPGTGKTMLVKAVAN--STKAAFIRVNGSE 241 >5VHO-B nrPDB Length = 267 Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + V+L GPPGTGKT LA A+A + + F +VGSE+ Sbjct: 54 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSEL 89 >6MSK-B nrPDB Length = 440 Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + V+L GPPGTGKT LA A+A + + F +VGSE+ Sbjct: 220 KGVILYGPPGTGKTLLAKAVANQTSAT--FLRVVGSEL 255 >6EF1-K nrPDB Length = 276 Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust. Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSE 100 R VLL GPPGTGKT L A+A +K F + GSE Sbjct: 55 RGVLLYGPPGTGKTMLVKAVAN--STKAAFIRVNGSE 89 >5ZQM-A nrPDB Length = 309 Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust. Identities = 17/33 (51%), Positives = 21/33 (63%) Query: 54 ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQE 86 E K + + VL+ GPPGTGKT LA A+A E Sbjct: 53 EFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATE 85 >4XGU-A nrPDB Length = 424 Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust. Identities = 15/29 (51%), Positives = 20/29 (68%) Query: 63 GRAVLLAGPPGTGKTALALAIAQELGSKV 91 R +LL GPPGTGKT+L +AQ L ++ Sbjct: 172 NRLILLTGPPGTGKTSLCKGLAQHLSIRM 200 >4D81-A nrPDB Length = 283 Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust. Identities = 16/26 (61%), Positives = 19/26 (73%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGS 89 R +LL GPPG GKT +A A+A EL S Sbjct: 46 RGILLYGPPGCGKTMIAAAVANELDS 71 >5T0C-AD nrPDB Length = 418 Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust. Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 6/65 (9%) Query: 40 VGQENAREACGVIVELIKSKKMAG----RAVLLAGPPGTGKTALALAIAQELGSKVPFCP 95 + ++ REA + + + K G R VL+ GPPG GKT LA A+A + F Sbjct: 172 IQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH--TTAAFIR 229 Query: 96 MVGSE 100 +VGSE Sbjct: 230 VVGSE 234 >1SXJ-A nrPDB Length = 516 Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust. Identities = 16/28 (57%), Positives = 19/28 (67%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKV 91 RA +L GPPG GKT A +AQELG + Sbjct: 78 RAAMLYGPPGIGKTTAAHLVAQELGYDI 105 >5EQT-A nrPDB Length = 257 Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + VLL GPPG GKT +A A+A E+ + F +VGSE+ Sbjct: 40 KGVLLYGPPGCGKTLMAKALAHEVNAT--FIRVVGSEL 75 >5VHP-E nrPDB Length = 262 Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 5/58 (8%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVL---MENFRR 118 + LL GPPGTGKT LA A+A +L F +V S + I ++ L M N+ R Sbjct: 41 KGCLLYGPPGTGKTLLARAVASQLDCN--FLKVVSSSIVDKYIGESARLIREMFNYAR 96 >6MSD-E nrPDB Length = 403 Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 5/58 (8%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVL---MENFRR 118 + LL GPPGTGKT LA A+A +L F +V S + I ++ L M N+ R Sbjct: 182 KGCLLYGPPGTGKTLLARAVASQLDCN--FLKVVSSSIVDKYIGESARLIREMFNYAR 237 >6MAT-A nrPDB Length = 813 Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%) Query: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTE-VLMENFRRA 119 +LL GPPG GKT +A A+A E SK F + G E+ + + ++E + + F RA Sbjct: 538 ILLWGPPGCGKTLVAKAVANE--SKANFISIKGPELLNKYVGESERAVRQLFSRA 590 Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 17/76 (22%) Query: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIK 125 VLL GP G GKT LA AIA +G V F P+ V ++E K Sbjct: 239 VLLHGPSGCGKTTLAHAIAGSIG--VAFIPVSAPSVIGGTSGESE--------------K 282 Query: 126 ETKEVYEGEVTELTPC 141 ++V++ E L PC Sbjct: 283 NIRDVFD-EAIRLAPC 297 >5VHN-D nrPDB Length = 262 Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust. Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSE 100 R VL+ GPPG GKT LA A+A + F +VGSE Sbjct: 56 RGVLMYGPPGCGKTMLAKAVAHH--TTAAFIRVVGSE 90 >4LGM-A nrPDB Length = 295 Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust. Identities = 15/26 (57%), Positives = 19/26 (73%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGS 89 R +LL GPPG GKT +A A+A E+ S Sbjct: 58 RGILLYGPPGCGKTMIAAAVANEIDS 83 >1IQP-A nrPDB Length = 327 Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 9/56 (16%) Query: 34 QAASGLVGQENAREACGVIVELIKSKKMAGRA--VLLAGPPGTGKTALALAIAQEL 87 Q +VGQE+ IV+ +K G +L AGPPG GKT ALA+A+EL Sbjct: 22 QRLDDIVGQEH-------IVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALALAREL 70 >5GJQ-J nrPDB Length = 406 Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + VLL GPPGTGKT LA A+A + F + GSE+ Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHH--TDCTFIRVSGSEL 219 >2CHG-A nrPDB Length = 226 Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust. Identities = 14/22 (63%), Positives = 20/22 (90%) Query: 66 VLLAGPPGTGKTALALAIAQEL 87 +L +GPPGTGKTA A+A+A++L Sbjct: 41 LLFSGPPGTGKTATAIALARDL 62 >2CHV-A nrPDB Length = 319 Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust. Identities = 14/22 (63%), Positives = 20/22 (90%) Query: 66 VLLAGPPGTGKTALALAIAQEL 87 +L +GPPGTGKTA A+A+A++L Sbjct: 41 LLFSGPPGTGKTATAIALARDL 62 >5M32-h nrPDB Length = 355 Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + VLL GPPGTGKT LA A+A + F + GSE+ Sbjct: 147 KGVLLYGPPGTGKTLLARAVAHH--TDCTFIRVSGSEL 182 >4ZPX-A nrPDB Length = 413 Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 7/49 (14%) Query: 39 LVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQEL 87 ++GQE+A VE+IK+ R VLL G PGTGK+ L A+A+ L Sbjct: 43 VIGQEHA-------VEVIKTAANQKRHVLLIGEPGTGKSMLGQAMAELL 84 >5W0T-A nrPDB Length = 304 Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust. Identities = 17/30 (56%), Positives = 20/30 (66%) Query: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKV 91 A VLL GPPG GKT LA A+A+E G+ Sbjct: 76 APSGVLLYGPPGCGKTMLAKALAKESGANF 105 >3K1J-A nrPDB Length = 604 Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 7/49 (14%) Query: 39 LVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQEL 87 ++GQE+A VE+IK+ R VLL G PGTGK+ L A+A+ L Sbjct: 43 VIGQEHA-------VEVIKTAANQKRHVLLIGEPGTGKSMLGQAMAELL 84 >6MDP-A nrPDB Length = 768 Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust. Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 2/29 (6%) Query: 65 AVLLAGPPGTGKTALALAIAQELGSKVPF 93 +VLL GPP +GKTALA IA+E S PF Sbjct: 562 SVLLEGPPHSGKTALAAKIAEE--SNFPF 588 Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust. Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 2/41 (4%) Query: 52 IVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVP 92 IVE + K + G +LL GPPG GKT LA I + L ++ P Sbjct: 268 IVEQMGCKHVKG--ILLYGPPGCGKTLLARQIGKMLNAREP 306 >5VHP-C nrPDB Length = 266 Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + VLL GPPGTGKT LA A+A + F + GSE+ Sbjct: 55 KGVLLYGPPGTGKTLLARAVAHH--TDCTFIRVSGSEL 90 >3JCO-J nrPDB Length = 405 Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust. Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + V+L GPPGTGKT LA A+A K F + G+E+ Sbjct: 183 KGVILYGPPGTGKTLLARAVAHHTDCK--FIRVSGAEL 218 >1D2N-A nrPDB Length = 272 Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust. Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 2/29 (6%) Query: 65 AVLLAGPPGTGKTALALAIAQELGSKVPF 93 +VLL GPP +GKTALA IA+E S PF Sbjct: 66 SVLLEGPPHSGKTALAAKIAEE--SNFPF 92 >6EF1-I nrPDB Length = 271 Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust. Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + V+L G PGTGKT LA A+A + + F +VGSE+ Sbjct: 51 KGVILYGAPGTGKTLLAKAVANQ--TSATFLRIVGSEL 86 >6FVU-I nrPDB Length = 384 Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust. Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + V+L G PGTGKT LA A+A + + F +VGSE+ Sbjct: 164 KGVILYGAPGTGKTLLAKAVANQ--TSATFLRIVGSEL 199 >5VFP-F nrPDB Length = 396 Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + VL+ GPPGTGKT LA A A + +K F + G ++ Sbjct: 178 KGVLMYGPPGTGKTLLARACAAQ--TKATFLKLAGPQL 213 >6EPD-M nrPDB Length = 442 Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + VL+ GPPGTGKT LA A A + +K F + G ++ Sbjct: 224 KGVLMYGPPGTGKTLLARACAAQ--TKATFLKLAGPQL 259 >6EF2-J nrPDB Length = 262 Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 3/49 (6%) Query: 54 ELIKSKKMAG-RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 EL +S +A + V+L GPPGTGKT LA A+A K F + G+E+ Sbjct: 29 ELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCK--FIRVSGAEL 75 >6EF3-H nrPDB Length = 467 Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + +LL GPPGTGKT A A+A + F ++GSE+ Sbjct: 244 KGILLYGPPGTGKTLCARAVANR--TDATFIRVIGSEL 279 >5VHO-A nrPDB Length = 267 Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust. Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + VLL GPPGTGKT A A+A + F ++GSE+ Sbjct: 53 KGVLLFGPPGTGKTLCARAVANR--TDACFIRVIGSEL 88 >3CF0-A nrPDB Length = 301 Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 54 ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTE 110 + +K + VL GPPG GKT LA AIA E + F + G E+ + ++E Sbjct: 40 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESE 94 >6EF0-H nrPDB Length = 257 Score = 34.7 bits (78), Expect = 0.094, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + +LL GPPGTGKT A A+A + F ++GSE+ Sbjct: 44 KGILLYGPPGTGKTLCARAVANR--TDATFIRVIGSEL 79 >3JCP-I nrPDB Length = 437 Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust. Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + V+L G PGTGKT LA A+A + + F +VGSE+ Sbjct: 217 KGVILYGAPGTGKTLLAKAVANQ--TSATFLRIVGSEL 252 >5VFU-A nrPDB Length = 361 Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust. Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + VLL GPPGTGKT A A+A + F ++GSE+ Sbjct: 138 KGVLLFGPPGTGKTLCARAVANR--TDACFIRVIGSEL 173 >5VHO-F nrPDB Length = 267 Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 + VL+ GPPGTGKT LA A A + +K F + G ++ Sbjct: 56 KGVLMYGPPGTGKTLLARACAAQ--TKATFLKLAGPQL 91 >5KWA-A nrPDB Length = 497 Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust. Identities = 15/28 (53%), Positives = 19/28 (67%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKV 91 + VLL GPPG GKT +A A+A L K+ Sbjct: 182 KGVLLYGPPGCGKTLIAKAVANSLAKKM 209 >3CM0-A nrPDB Length = 186 Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust. Identities = 16/28 (57%), Positives = 19/28 (67%) Query: 63 GRAVLLAGPPGTGKTALALAIAQELGSK 90 G+AV+ GPPG GK A +AQELG K Sbjct: 4 GQAVIFLGPPGAGKGTQASRLAQELGFK 31 >5E7P-A nrPDB Length = 745 Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 28/155 (18%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTE-VLMENFRRAIGL 122 R VLL GPPG GKT + A+A ++ + GSE+ + +E + E F RA Sbjct: 520 RGVLLYGPPGCGKTFVVRALASS--GRLSVHAVKGSELMDKWVGSSEKAVRELFARA--- 574 Query: 123 RIKETKEVYEGEVTELTPCETENPMGGY-GKTISHVIIGLKTAKGTKQLK---------- 171 R V+ E+ L P +N G K ++ ++ L G + L+ Sbjct: 575 RDSAPSLVFLDEIDALAPRRGQNFDSGVTDKVVASLLTEL---DGIEPLRDVVVLGATNR 631 Query: 172 ---LDPSIFESLQKERVEAGDVIYIEANSGAVKRQ 203 +DP++ + ER ++++E A +R Sbjct: 632 PDLIDPALLRPGRLER-----LVFVEPPDAAARRD 661 >3H0K-A nrPDB Length = 178 Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRR 118 + +L+ G PG+GK+ A + +E G+KV V + YS E K E LM+ +R Sbjct: 1 KVILITGMPGSGKSEFA-KLLKERGAKVIVMSDVVRKRYSIEAKPGERLMDFAKR 54 >1SXJ-D nrPDB Length = 353 Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%) Query: 48 ACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQEL 87 A V+ + +KS + +L GPPGTGKT+ LA+ +EL Sbjct: 45 AVTVLKKTLKSANLP--HMLFYGPPGTGKTSTILALTKEL 82 >1SXJ-C nrPDB Length = 340 Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust. Identities = 13/25 (52%), Positives = 19/25 (76%) Query: 66 VLLAGPPGTGKTALALAIAQELGSK 90 +L GPPGTGKT+ +A+A+E+ K Sbjct: 49 LLFYGPPGTGKTSTIVALAREIYGK 73 >1Y63-A nrPDB Length = 184 Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust. Identities = 14/25 (56%), Positives = 18/25 (72%) Query: 63 GRAVLLAGPPGTGKTALALAIAQEL 87 G +L+ G PGTGKT++A IA EL Sbjct: 10 GINILITGTPGTGKTSMAEMIAAEL 34 >4L16-A nrPDB Length = 334 Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 9/82 (10%) Query: 39 LVGQENAREACGVIV-------ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKV 91 + G E A++A IV ++ + + VLL GPPGTGKT + +A + K Sbjct: 58 VAGLEGAKKALREIVVLPFKRPDVFTGIRAPPKGVLLFGPPGTGKTMIGRCVASQ--CKA 115 Query: 92 PFCPMVGSEVYSTEIKKTEVLM 113 F + S + S + + E L+ Sbjct: 116 TFFNISASSLTSKWVGEGEKLV 137 >3Q8X-B nrPDB Length = 287 Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Query: 54 ELIKSKKM--AGRAVLLAGPPGTGKTALALAIAQELGSKV 91 ELI+ KK + A LL G PG+GKT+L AI +E V Sbjct: 22 ELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNV 61 >3D8B-A nrPDB Length = 357 Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust. Identities = 13/26 (50%), Positives = 18/26 (69%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGS 89 + +LL GPPGTGKT + IA + G+ Sbjct: 118 KGILLFGPPGTGKTLIGKCIASQSGA 143 >5A5B-M nrPDB Length = 434 Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust. Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 3/33 (9%) Query: 57 KSKKMAGRA---VLLAGPPGTGKTALALAIAQE 86 K K M RA L+ GPPGTGKT LA A A + Sbjct: 206 KFKDMGIRAPKGALMYGPPGTGKTLLARACAAQ 238 >1W49-A nrPDB Length = 331 Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 1/94 (1%) Query: 28 ESGLAKQAASG-LVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQE 86 E+G KQ G LV C +V + A V++ G +GKT L A+ + Sbjct: 87 ENGFMKQGHRGWLVDLTGELVGCSPVVAEFGGHRYASGMVIVTGKGNSGKTPLVHALGEA 146 Query: 87 LGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 120 LG K + + E S V +++ RA+ Sbjct: 147 LGGKDKYATVRFGEPLSGYNTDFNVFVDDIARAM 180 >3PVS-A nrPDB Length = 447 Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust. Identities = 17/37 (45%), Positives = 22/37 (59%) Query: 65 AVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 +++L GPPGTGKT LA IA+ + V V S V Sbjct: 52 SMILWGPPGTGKTTLAEVIARYANADVERISAVTSGV 88 >4YPN-A nrPDB Length = 293 Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust. Identities = 12/25 (48%), Positives = 18/25 (72%) Query: 66 VLLAGPPGTGKTALALAIAQELGSK 90 ++L GPPG GKT+L +IA+ + K Sbjct: 146 LVLVGPPGVGKTSLGRSIARSMNRK 170 >6EF0-M nrPDB Length = 258 Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust. Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 3/33 (9%) Query: 57 KSKKMAGRA---VLLAGPPGTGKTALALAIAQE 86 K K M RA L+ GPPGTGKT LA A A + Sbjct: 31 KFKDMGIRAPKGALMYGPPGTGKTLLARACAAQ 63 >5BQ5-A nrPDB Length = 189 Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust. Identities = 12/21 (57%), Positives = 15/21 (71%) Query: 66 VLLAGPPGTGKTALALAIAQE 86 +L GPPG GKT LA++I E Sbjct: 42 ILFLGPPGIGKTHLAISIGME 62 >4XGC-E nrPDB Length = 460 Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%) Query: 65 AVLLAGPPGTGKTALALAIAQELGSK--VPFCPMVGSEVYSTEIKKTEVLMENF 116 A+ L G GTGKTAL A +E G + V + E Y+T+I E+L+++ Sbjct: 36 AIYLFGHSGTGKTALTRAFLKECGKRQNVRTAHLNAIECYTTKI-MLEILLDSL 88 >3CRV-A nrPDB Length = 551 Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust. Identities = 14/37 (37%), Positives = 20/37 (54%) Query: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVY 102 V L P G+GKT +L ++ E+ KV F +E Y Sbjct: 25 VALNAPTGSGKTLFSLLVSLEVKPKVLFVVRTHNEFY 61 >1P4S-A nrPDB Length = 181 Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust. Identities = 13/23 (56%), Positives = 17/23 (73%) Query: 66 VLLAGPPGTGKTALALAIAQELG 88 VLL GPPG GK A+ +A++LG Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKLG 25 >4YPL-A nrPDB Length = 555 Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust. Identities = 12/25 (48%), Positives = 18/25 (72%) Query: 66 VLLAGPPGTGKTALALAIAQELGSK 90 ++L GPPG GKT+L +IA+ + K Sbjct: 113 LVLVGPPGVGKTSLGRSIARSMNRK 137 >2ZE6-A nrPDB Length = 253 Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust. Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 6/39 (15%) Query: 67 LLAGPPGTGKTALALAIAQELG------SKVPFCPMVGS 99 L+ GP +GKT +A+ IAQE G +V CP + + Sbjct: 5 LIYGPTCSGKTDMAIQIAQETGWPVVALDRVQCCPQIAT 43 >4RF9-A nrPDB Length = 718 Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust. Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 16/92 (17%) Query: 172 LDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATE----------FDLEAEEY- 220 L P +F+SL+ ++ G +Y NSG C YA + FD E+Y Sbjct: 390 LTPELFDSLKDKKTAKGISLYDCINSGVENLDSSCGVYAGDEECYTLFAPLFDKIVEDYH 449 Query: 221 VPLPKGDVHKKKEIIQDVTLHDLDVANARPQG 252 P + H D+ +D N P+G Sbjct: 450 SPYKLANKH-----TSDMNPEKVDAPNLDPEG 476 Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 11/87 (12%) Query: 172 LDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATE----------FDLEAEEY- 220 L P +FESL+ ++ + G ++ NSG V YA + FD E+Y Sbjct: 38 LTPKVFESLKNKKTKLGITLWDCINSGVVNLDSGVGVYAGDEESYTLFGPLFDAIIEDYH 97 Query: 221 VPLPKGDVHKKKEIIQDVTLHDLDVAN 247 P H V DLD AN Sbjct: 98 SPYKLATGHNSDMNPAHVKAPDLDPAN 124 >2R6A-A nrPDB Length = 454 Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust. Identities = 12/25 (48%), Positives = 17/25 (68%) Query: 66 VLLAGPPGTGKTALALAIAQELGSK 90 +++A P GKTA AL IAQ + +K Sbjct: 206 IIVAARPSVGKTAFALNIAQNVATK 230 >4NMN-A nrPDB Length = 434 Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%) Query: 63 GRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLM 113 G ++LA PG GKTA L+I L K P S V+S E+ K +++M Sbjct: 193 GDLIILAARPGMGKTAFMLSIIYNLA-KDEGKP---SAVFSLEMSKEQLVM 239 >3GP8-A nrPDB Length = 574 Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 13/79 (16%) Query: 23 GLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALA 82 G G D+ + K+A GL + E V+ +L R V+L G PGTGK+ A Sbjct: 174 GAGNDDWAVPKKARKGL-----SEEQASVLDQLAGH-----RLVVLTGGPGTGKSTTTKA 223 Query: 83 I---AQELGSKVPFCPMVG 98 + A+ LG +V C G Sbjct: 224 VADLAESLGLEVGLCAPTG 242 >4I5O-A nrPDB Length = 363 Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust. Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 12/66 (18%) Query: 39 LVGQENAREACGVIV----------ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELG 88 ++GQE A++ V V + ++ +LL GP G+GKT LA +A+ L Sbjct: 17 VIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLL- 75 Query: 89 SKVPFC 94 VPF Sbjct: 76 -DVPFT 80 >3W34-A nrPDB Length = 211 Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust. Identities = 14/29 (48%), Positives = 19/29 (65%) Query: 68 LAGPPGTGKTALALAIAQELGSKVPFCPM 96 +AG +GKT LA A+A+ LG +V PM Sbjct: 11 IAGGTASGKTTLAQALARTLGERVALLPM 39 >5M7N-A nrPDB Length = 454 Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 18/122 (14%) Query: 66 VLLAGPPGTGKTALALAI-AQELGSKVPFCPM----VGSEVYSTEIKKTEVLMENFRRAI 120 +++ GP G GK +A AI AQ + PF + + E E+ TE M+ R + Sbjct: 167 IMITGPSGAGKELVARAIHAQSSRANGPFVTVNAATITPERMEIELFGTE--MDGGERKV 224 Query: 121 G-LRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIG--LKTAKGTKQLKLDPSIF 177 G L +Y EV ++ P ET+N I V++ + GTK++K+D I Sbjct: 225 GALEEAHGGILYLDEVADM-PRETQN-------KILRVLVDQQFERVGGTKRVKVDVRII 276 Query: 178 ES 179 S Sbjct: 277 SS 278 >3G5T-A nrPDB Length = 299 Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%) Query: 73 GTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLME 114 G G L +AQEL PF ++GS++ +T IK EV+ E Sbjct: 44 GCGPGTATLQMAQELK---PFEQIIGSDLSATMIKTAEVIKE 82 >5EYN-A nrPDB Length = 323 Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Query: 65 AVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGL 122 ++ LA P T A+A +E+G V F P + EV+S + + L RA+GL Sbjct: 143 SIALANQPSRSSTFAAIAQMKEVGGYVSFDPNLREEVWS----EPQELQATVMRAVGL 196 >6G2J-O nrPDB Length = 355 Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 35/223 (15%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGL- 122 R + + G +GK LA IAQ+LG K P G + ST L F + L Sbjct: 58 RVITVDGNICSGKNKLAKEIAQQLGMK--HYPEAGIQYSSTTTGDGRPLDIEFSGSCSLE 115 Query: 123 RIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQK 182 + + + +G L + + Y + H+ L T +G + L+ SI+ Sbjct: 116 KFYDDPKSNDGNSYRLQSWLYASRLLQYADALEHL---LSTGQG---VVLERSIY----- 164 Query: 183 ERVEAGDVIYIEA--NSGAVKRQGRCDTYATEFDLEAEEYVP--------LPKGDVHKKK 232 D +++EA N G +++Q D Y L EY+P +P +V + Sbjct: 165 -----SDFVFLEAMYNQGYIRKQC-VDHYNEIKRLTLPEYLPPHAVIYIDVPVPEVQSRI 218 Query: 233 EIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKL 275 + D H++ V +A QDI + + PK +E+ + L Sbjct: 219 QKKGDP--HEMKVTSAY---LQDIENAYKKTFLPKMSEMCEVL 256 >2P6R-A nrPDB Length = 702 Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 17/91 (18%) Query: 59 KKMAGRAVLLAGPPGTGKTALA-LAIAQEL--GSK----VPFCPMVGSEVYSTEIKKTEV 111 K +G+ +LLA P GKT LA +A+ +E G K VP + G + S KK E Sbjct: 36 KVFSGKNLLLAMPTAAGKTLLAEMAMVREAIKGGKSLYVVPLRALAGEKYES--FKKWE- 92 Query: 112 LMENFRRAIGLRIKETKEVYEGEVTELTPCE 142 IGLRI + YE L C+ Sbjct: 93 -------KIGLRIGISTGDYESRDEHLGDCD 116 >1TMQ-A nrPDB Length = 471 Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust. Identities = 32/126 (25%), Positives = 49/126 (38%), Gaps = 20/126 (15%) Query: 173 DPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEY--VPLPKGDVHK 230 D S F + + +AG IY++A + T + D + Y VP GD H Sbjct: 73 DESAFTDMTRRCNDAGVRIYVDAVINHMTGMNGVGTSGSSADHDGMNYPAVPYGSGDFHS 132 Query: 231 KKEI--IQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYID 288 E+ QD +V N G +D+ + +D +RG + +N ID Sbjct: 133 PCEVNNYQDAD----NVRNCELVGLRDL------------NQGSDYVRGVLIDYMNHMID 176 Query: 289 QGVAEL 294 GVA Sbjct: 177 LGVAGF 182 >3PXI-A nrPDB Length = 758 Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 29/42 (69%), Gaps = 3/42 (7%) Query: 52 IVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQE-LGSKVP 92 ++E++ S++ VL+ G PG GKTA+A +AQ+ + ++VP Sbjct: 192 VIEVL-SRRTKNNPVLI-GEPGVGKTAIAEGLAQQIINNEVP 231 >3PXG-A nrPDB Length = 468 Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 29/42 (69%), Gaps = 3/42 (7%) Query: 52 IVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQE-LGSKVP 92 ++E++ S++ VL+ G PG GKTA+A +AQ+ + ++VP Sbjct: 192 VIEVL-SRRTKNNPVLI-GEPGVGKTAIAEGLAQQIINNEVP 231 >3J3U-A nrPDB Length = 810 Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 29/42 (69%), Gaps = 3/42 (7%) Query: 52 IVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQE-LGSKVP 92 ++E++ S++ VL+ G PG GKTA+A +AQ+ + ++VP Sbjct: 192 VIEVL-SRRTKNNPVLI-GEPGVGKTAIAEGLAQQIINNEVP 231 >2Q6T-A nrPDB Length = 444 Score = 28.1 bits (61), Expect = 9.3, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%) Query: 67 LLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLM 113 ++A P GKTA AL IAQ K VG +YS E+ ++ + Sbjct: 204 IIAARPAMGKTAFALTIAQNAALK----EGVGVGIYSLEMPAAQLTL 246 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6QI8-A nrPDB 697 0.0 5FM7-A nrPDB 651 0.0 6GEJ-T nrPDB 618 e-177 6QI9-D nrPDB 597 e-171 4WW4-B nrPDB 575 e-164 6GEJ-U nrPDB 562 e-160 2XSZ-A nrPDB 357 7e-99 2XSZ-D nrPDB 309 1e-84 1HQC-A nrPDB 148 4e-36 1XWI-A nrPDB 119 2e-27 2X8A-A nrPDB 119 3e-27 2ZAO-A nrPDB 117 7e-27 5UBV-A nrPDB 105 3e-23 1LV7-A nrPDB 102 3e-22 2CE7-A nrPDB 97 2e-20 2CQA-A nrPDB 96 3e-20 5C18-A nrPDB 96 4e-20 6MCK-A nrPDB 96 4e-20 6AZ0-A nrPDB 95 6e-20 6CHS-H nrPDB 93 2e-19 6BLB-A nrPDB 91 1e-18 3HU1-A nrPDB 90 2e-18 2R65-A nrPDB 89 3e-18 2QZ4-A nrPDB 85 8e-17 6EF0-L nrPDB 84 1e-16 1IN6-A nrPDB 84 2e-16 6FVU-L nrPDB 82 4e-16 5WVI-L nrPDB 82 5e-16 2DHR-A nrPDB 82 5e-16 Sequences not found previously or not previously below threshold: 5OUN-A nrPDB 117 8e-27 6AP1-A nrPDB 102 3e-22 3EIH-A nrPDB 101 6e-22 5XMK-A nrPDB 100 1e-21 6MAT-A nrPDB 97 1e-20 3CF0-A nrPDB 96 2e-20 5VC7-A nrPDB 91 7e-19 5G4G-A nrPDB 90 2e-18 5Z6Q-A nrPDB 87 1e-17 6B5C-A nrPDB 87 1e-17 5ZQM-A nrPDB 86 3e-17 6EPC-H nrPDB 85 6e-17 5VFU-A nrPDB 84 1e-16 3H4M-A nrPDB 84 1e-16 4D81-A nrPDB 84 2e-16 5VHO-A nrPDB 83 2e-16 3D8B-A nrPDB 83 2e-16 4LCB-A nrPDB 82 3e-16 1IY1-A nrPDB 82 4e-16 6EF0-H nrPDB 82 4e-16 4LGM-A nrPDB 82 4e-16 3WHK-A nrPDB 82 4e-16 6EF3-H nrPDB 82 7e-16 3PFI-A nrPDB 81 1e-15 6HE9-H nrPDB 81 1e-15 6HE4-H nrPDB 81 1e-15 6EF1-K nrPDB 79 3e-15 5WVI-K nrPDB 79 3e-15 4L16-A nrPDB 78 6e-15 6NYV-B nrPDB 78 8e-15 5EQT-A nrPDB 78 1e-14 5E7P-A nrPDB 77 1e-14 5M32-h nrPDB 77 1e-14 6MSK-B nrPDB 77 1e-14 5GJQ-J nrPDB 77 1e-14 5VHF-B nrPDB 77 2e-14 5VFP-B nrPDB 77 2e-14 5VHP-C nrPDB 76 3e-14 5VHO-B nrPDB 76 3e-14 5VHN-D nrPDB 76 4e-14 4Z8X-A nrPDB 76 4e-14 5T0C-AD nrPDB 75 8e-14 5VHP-E nrPDB 74 1e-13 5VFP-F nrPDB 73 2e-13 5VHO-F nrPDB 73 2e-13 3JCP-I nrPDB 73 3e-13 6FVU-I nrPDB 73 3e-13 6MSD-E nrPDB 73 3e-13 6EPD-M nrPDB 72 4e-13 3JCO-J nrPDB 72 6e-13 6EF1-I nrPDB 71 8e-13 5A5B-M nrPDB 71 1e-12 6EF2-J nrPDB 71 1e-12 6EF0-M nrPDB 68 6e-12 6B5D-A nrPDB 68 7e-12 6MDP-A nrPDB 68 1e-11 5WC0-A nrPDB 67 1e-11 5KWA-A nrPDB 66 3e-11 5W0T-A nrPDB 66 3e-11 5VQ9-D nrPDB 55 6e-08 4XGU-A nrPDB 54 1e-07 1IQP-A nrPDB 53 2e-07 2CHG-A nrPDB 51 9e-07 2CHV-A nrPDB 50 2e-06 1SXJ-A nrPDB 46 3e-05 1NJG-A nrPDB 46 3e-05 4I5O-A nrPDB 45 5e-05 3GLF-B nrPDB 45 5e-05 3PVS-A nrPDB 43 2e-04 3M6A-A nrPDB 43 3e-04 1D2N-A nrPDB 42 6e-04 4ZPX-A nrPDB 40 0.002 1OFI-A nrPDB 40 0.002 3K1J-A nrPDB 39 0.004 4LJ8-A nrPDB 39 0.005 1UM8-A nrPDB 38 0.008 3GP8-A nrPDB 38 0.008 1SXJ-C nrPDB 37 0.014 1SXJ-D nrPDB 37 0.014 4FW9-A nrPDB 37 0.018 3SR0-A nrPDB 37 0.019 6QEL-G nrPDB 37 0.019 6EMW-B nrPDB 37 0.020 6AMN-A nrPDB 37 0.021 5LKM-A nrPDB 37 0.022 5VY8-A nrPDB 37 0.023 1QVR-A nrPDB 36 0.027 1SXJ-B nrPDB 36 0.031 1R6B-X nrPDB 36 0.039 3UPU-A nrPDB 36 0.042 5M7N-A nrPDB 36 0.043 3U5Z-B nrPDB 35 0.058 6EM8-A nrPDB 35 0.058 3PXI-A nrPDB 35 0.089 4EUN-A nrPDB 35 0.096 4YPL-A nrPDB 34 0.10 1E94-E nrPDB 34 0.10 1P4S-A nrPDB 34 0.13 4YPN-A nrPDB 34 0.13 6E11-1 nrPDB 34 0.14 6G1K-A nrPDB 34 0.15 3CRV-A nrPDB 34 0.16 3SYK-A nrPDB 34 0.17 3CM0-A nrPDB 34 0.18 6D00-1 nrPDB 34 0.20 5GKO-A nrPDB 33 0.25 2GZA-A nrPDB 33 0.25 2VL7-A nrPDB 33 0.26 2PJZ-A nrPDB 33 0.27 1IM2-A nrPDB 33 0.27 2I3B-A nrPDB 33 0.32 5BQ5-A nrPDB 32 0.44 3FVQ-A nrPDB 32 0.47 3VTF-A nrPDB 32 0.48 5JZV-A nrPDB 32 0.50 3R8F-A nrPDB 32 0.61 1Y63-A nrPDB 32 0.61 4XGC-D nrPDB 32 0.62 4FWV-A nrPDB 32 0.67 3EC2-A nrPDB 32 0.70 1G8P-A nrPDB 32 0.73 6ED3-A nrPDB 32 0.76 6EMW-E nrPDB 31 0.88 3B5X-A nrPDB 31 0.88 4XGC-E nrPDB 31 0.90 3Q8X-B nrPDB 31 0.93 3IIK-A nrPDB 31 1.0 1TAF-A nrPDB 31 1.1 5K1S-A nrPDB 31 1.1 2V1U-A nrPDB 31 1.1 2C9Y-A nrPDB 31 1.2 3J3U-A nrPDB 31 1.3 5D4W-A nrPDB 31 1.4 3W34-A nrPDB 31 1.4 3DZD-A nrPDB 30 1.4 1SXJ-E nrPDB 30 1.5 3C8U-A nrPDB 30 1.5 5XA2-A nrPDB 30 1.8 4UPB-C nrPDB 30 2.0 2QGZ-A nrPDB 30 2.0 4CVN-A nrPDB 30 2.2 4XIG-S nrPDB 30 2.2 5W36-A nrPDB 30 2.4 5OFO-C nrPDB 30 2.4 4M4W-J nrPDB 30 2.4 4CIU-A nrPDB 30 2.5 6IC4-I nrPDB 30 2.5 3O0O-A nrPDB 30 2.7 5G3Y-A nrPDB 30 2.8 3PXG-A nrPDB 29 3.2 3Q72-A nrPDB 29 4.7 4NMN-A nrPDB 29 4.8 3H0K-A nrPDB 29 4.8 2R6A-A nrPDB 28 7.0 1KU5-A nrPDB 28 8.0 1XZP-A nrPDB 28 8.2 >6QI8-A nrPDB Length = 456 Score = 697 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 455/456 (99%), Positives = 456/456 (100%) Query: 1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK 60 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK Sbjct: 1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK 60 Query: 61 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 120 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI Sbjct: 61 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 120 Query: 121 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL 180 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL Sbjct: 121 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL 180 Query: 181 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL 240 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL Sbjct: 181 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL 240 Query: 241 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAELVPGVLF 300 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQG+AELVPGVLF Sbjct: 241 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLF 300 Query: 301 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI 360 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI Sbjct: 301 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI 360 Query: 361 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN 420 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN Sbjct: 361 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN 420 Query: 421 GKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK 456 GKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK Sbjct: 421 GKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK 456 >5FM7-A nrPDB Length = 464 Score = 651 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 306/447 (68%), Positives = 383/447 (85%) Query: 1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK 60 ++I EV+ T+ R A+H+H+KGLGL+ SG+A++ A+G VGQ AREACGV+V+LIK+ K Sbjct: 4 VQISEVRGNTRDHRTAAHTHIKGLGLNSSGIAEKQAAGFVGQCAAREACGVVVDLIKAHK 63 Query: 61 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 120 MAGR VLLAG PGTGKTALALAI+QELG+K+PFCP+ GSE+YSTE+KKTEVLMENFRRAI Sbjct: 64 MAGRGVLLAGGPGTGKTALALAISQELGTKIPFCPITGSEIYSTEVKKTEVLMENFRRAI 123 Query: 121 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL 180 GLR++ETK+VYEGEVTE+TP E ENP+GGYGKTIS ++IGLK+A+G K+L+LDPSI+E++ Sbjct: 124 GLRVRETKDVYEGEVTEMTPEEAENPLGGYGKTISTLLIGLKSARGQKKLRLDPSIYEAI 183 Query: 181 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL 240 QKERV+ GDVIYIE N+GA KR GR D YATEFDLEAEEYVP+PKG+VHKKKEI+QDVTL Sbjct: 184 QKERVQVGDVIYIETNTGACKRVGRSDAYATEFDLEAEEYVPIPKGEVHKKKEIVQDVTL 243 Query: 241 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAELVPGVLF 300 HDLDVANARPQGGQDI+SMMGQLMKPK TEITDKLR EINKVV KYI+QGVAEL+PGVLF Sbjct: 244 HDLDVANARPQGGQDIISMMGQLMKPKMTEITDKLRMEINKVVQKYINQGVAELIPGVLF 303 Query: 301 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI 360 +DE HMLDIECFTYL++ALES IAPIV+ ASNRG IRG +D+ + HGIP D L R++I Sbjct: 304 IDEAHMLDIECFTYLNKALESPIAPIVVLASNRGIATIRGADDLKAAHGIPPDFLQRLLI 363 Query: 361 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN 420 I T Y P E+++I++IRAQTEG+ +++ A++ + E G + +LRY +QLL PA++LA++N Sbjct: 364 IPTHPYEPDEIRRIVRIRAQTEGVQLTDAAVDRVAEHGVRISLRYCLQLLAPASILARVN 423 Query: 421 GKDSIEKEHVEEISELFYDAKSSAKIL 447 G+ ++ + + E ELF DA+ SA IL Sbjct: 424 GRTQVDVQDIAEAEELFLDARRSANIL 450 >6GEJ-T nrPDB Length = 463 Score = 618 bits (1593), Expect = e-177, Method: Composition-based stats. Identities = 312/456 (68%), Positives = 375/456 (82%), Gaps = 8/456 (1%) Query: 1 MKIEEVKSTTKTQ--------RIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVI 52 + I EVK R A+H+H+KGLGLDESG+AK+ G VGQ AREACGVI Sbjct: 2 VAISEVKENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGVI 61 Query: 53 VELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVL 112 V+LIK+KKM+GRA+LLAG P TGKTALALAI+QELG KVPFCP+VGSE+YS E+KKTE L Sbjct: 62 VDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETL 121 Query: 113 MENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKL 172 MENFRRAIGLRIKETKEVYEGEVTELTP + ENP+GGYGKTISHVI+GLK+AKGTK L+L Sbjct: 122 MENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRL 181 Query: 173 DPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKK 232 DP+I+ES+Q+E+V GDVIYIEAN+GAVKR GR D YATEFDLE EEYVPLPKG+VHKKK Sbjct: 182 DPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHKKK 241 Query: 233 EIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVA 292 EI+QDVTLHDLDVANARPQGGQD++SMMGQL+KPKKTEIT+KLR E+NKVV KYIDQGVA Sbjct: 242 EIVQDVTLHDLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGVA 301 Query: 293 ELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPL 352 EL+PGVLF+DEV+MLDIE FTYL++ALES+IAP+V+ ASNRG +RGTED+ SPHG+P Sbjct: 302 ELIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVPP 361 Query: 353 DLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTP 412 DL+DR++I+RT+ Y E++ II+ RA E + + AL+ L +GT+T+LRY++QLL P Sbjct: 362 DLIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLAP 421 Query: 413 ANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILA 448 +LA+ + + I V E LF DAK S KIL Sbjct: 422 CGILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKILE 457 >6QI9-D nrPDB Length = 463 Score = 597 bits (1539), Expect = e-171, Method: Composition-based stats. Identities = 195/456 (42%), Positives = 301/456 (66%), Gaps = 15/456 (3%) Query: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61 K+ E++ T+ +RI +HSH++GLGLD++ +QA+ G+VGQ AR A GV++E+I+ K+ Sbjct: 9 KVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKI 68 Query: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIG 121 AGRAVL+AG PGTGKTA+A+ +AQ LG PF + GSE++S E+ KTE L + FRR+IG Sbjct: 69 AGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIG 128 Query: 122 LRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQ 181 +RIKE E+ EGEV E+ + + P G G + + LKT + L + ESL Sbjct: 129 VRIKEETEIIEGEVVEI---QIDRPATGTGSKVGKL--TLKTTEMETIYDLGTKMIESLT 183 Query: 182 KERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEE--YVPLPKGDVHKKKEIIQDVT 239 K++V+AGDVI I+ +G + + GR T A ++D + +V P G++ K+KE++ V+ Sbjct: 184 KDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVS 243 Query: 240 LHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAELVPGVL 299 LH++DV N+R QG L EI ++R +IN V ++ ++G AE++PGVL Sbjct: 244 LHEIDVINSRTQG-------FLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVL 296 Query: 300 FVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVM 359 F+DEVHMLDIE F++L+RALES +AP++I A+NRG IRGT SPHGIP+DLLDR++ Sbjct: 297 FIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTS-YQSPHGIPIDLLDRLL 355 Query: 360 IIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKI 419 I+ T Y+ ++ KQI++IR + E + +SE+A L IG +T+LRY++QL+T A+L+ + Sbjct: 356 IVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRK 415 Query: 420 NGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYM 455 ++ + ++ + LF D S + + + QD ++ Sbjct: 416 RKGTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFL 451 >4WW4-B nrPDB Length = 513 Score = 575 bits (1483), Expect = e-164, Method: Composition-based stats. Identities = 194/456 (42%), Positives = 290/456 (63%), Gaps = 17/456 (3%) Query: 3 IEEVKSTTKTQRIASHSHVKGLGLD-ESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61 + E K IA+HSH++GLG+D ++ + ++ GLVGQE AR+A V++E+IK K+ Sbjct: 34 VTETKELRGLNLIAAHSHIRGLGVDADTLEPRPSSQGLVGQEKARKAAAVVLEMIKQGKI 93 Query: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIG 121 AGRAVL+AGPP TGKTA+A+ +AQ LG VPF + SE++S E+ KTE L + FR++IG Sbjct: 94 AGRAVLIAGPPSTGKTAIAMGMAQSLGQDVPFTTLAASEIFSLEMSKTEALTQAFRKSIG 153 Query: 122 LRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQ 181 +RIKE E+ EGEV E+ + GK + +KT + + +++ Sbjct: 154 VRIKEESEIMEGEVVEIQIDRSVTGGAKQGK------LTIKTTDMEAIYDMGSKMIDAMT 207 Query: 182 KERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEA--EEYVPLPKGDVHKKKEIIQDVT 239 KERV AGD+I I+ +SG + + GR + ++D +++ P+G++ K+KE++ V+ Sbjct: 208 KERVMAGDIISIDKSSGKITKLGRSYARSRDYDAMGVDTKFLQCPEGELQKRKEVVHTVS 267 Query: 240 LHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAELVPGVL 299 LH++DV N+R QG L EI ++R +IN V ++ ++G AE+VPGVL Sbjct: 268 LHEIDVINSRTQG-------FLALFSGDTGEIRSEIRDQINTKVAEWKEEGKAEIVPGVL 320 Query: 300 FVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVM 359 F+DEVHMLDIECF+Y++RALES +APIVI ASNRG IRGT D SPHG+PLD LDRV+ Sbjct: 321 FIDEVHMLDIECFSYINRALESDLAPIVIMASNRGVSRIRGT-DYKSPHGLPLDFLDRVV 379 Query: 360 IIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKI 419 II T YTP E++QI+ IRAQ E ++++ +AL L +IG + LRY+ L+T + L+A Sbjct: 380 IINTHPYTPDELRQILSIRAQEEEVDLTPDALALLTKIGQEAGLRYASNLITTSQLIAAK 439 Query: 420 NGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYM 455 + E V+ +LFYD S + + + + + + Sbjct: 440 RRAKQVGVEDVQRSFKLFYDPARSVRFVQESEKRLI 475 >6GEJ-U nrPDB Length = 471 Score = 562 bits (1447), Expect = e-160, Method: Composition-based stats. Identities = 189/453 (41%), Positives = 282/453 (62%), Gaps = 16/453 (3%) Query: 5 EVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGR 64 E IA+HSH+ GLGLDE+ + + G+VGQ AR A GVI++++++ +AGR Sbjct: 10 ETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGR 69 Query: 65 AVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRI 124 AVL+AGPP TGKTALA+ ++Q LG VPF + GSE++S E+ KTE L + FR++IG++I Sbjct: 70 AVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIKI 129 Query: 125 KETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKER 184 KE E+ EGEV E+ + GK + +KT +L + + L KE+ Sbjct: 130 KEETELIEGEVVEIQIDRSITGGHKQGK------LTIKTTDMETIYELGNKMIDGLTKEK 183 Query: 185 VEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEE--YVPLPKGDVHKKKEIIQDVTLHD 242 V AGDVI I+ SG + + GR + ++D + +V P+G++ K+K ++ V+LH+ Sbjct: 184 VLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVSLHE 243 Query: 243 LDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAELVPGVLFVD 302 +DV N+R QG L EI ++R +IN V ++ ++G AE+VPGVLF+D Sbjct: 244 IDVINSRTQG-------FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFID 296 Query: 303 EVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIR 362 EVHMLDIECF++++RALE APIV+ A+NRG RGT + SPHG+PLDLLDR +II Sbjct: 297 EVHMLDIECFSFINRALEDEFAPIVMMATNRGVSKTRGT-NYKSPHGLPLDLLDRSIIIT 355 Query: 363 TMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGK 422 T Y QE+K I+ IRAQ E + +S +AL+ L + G +T+LRYS L++ A +A Sbjct: 356 TKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKN 415 Query: 423 DSIEKEHVEEISELFYDAKSSAKILADQQDKYM 455 +++E E V+ LF D+ S K + + + +Y+ Sbjct: 416 NTVEVEDVKRAYLLFLDSARSVKYVQENESQYI 448 >2XSZ-A nrPDB Length = 367 Score = 357 bits (915), Expect = 7e-99, Method: Composition-based stats. Identities = 222/223 (99%), Positives = 223/223 (100%) Query: 234 IIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAE 293 IIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQG+AE Sbjct: 145 IIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAE 204 Query: 294 LVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLD 353 LVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLD Sbjct: 205 LVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLD 264 Query: 354 LLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPA 413 LLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPA Sbjct: 265 LLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPA 324 Query: 414 NLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK 456 NLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK Sbjct: 325 NLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK 367 Score = 188 bits (476), Expect = 6e-48, Method: Composition-based stats. Identities = 128/150 (85%), Positives = 130/150 (86%), Gaps = 1/150 (0%) Query: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM Sbjct: 16 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 75 Query: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIG 121 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIG Sbjct: 76 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIG 135 Query: 122 LRIKE-TKEVYEGEVTELTPCETENPMGGY 150 LRIKE + + P GG Sbjct: 136 LRIKEGPPGIIQDVTLHDLDVANARPQGGQ 165 >2XSZ-D nrPDB Length = 378 Score = 309 bits (792), Expect = 1e-84, Method: Composition-based stats. Identities = 92/222 (41%), Positives = 147/222 (66%), Gaps = 8/222 (3%) Query: 234 IIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAE 293 ++ V+LH++DV N+R QG L EI ++R +IN V ++ ++G AE Sbjct: 153 VVHTVSLHEIDVINSRTQG-------FLALFSGDTGEIKSEVREQINAKVAEWREEGKAE 205 Query: 294 LVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLD 353 ++PGVLF+DEVHMLDIE F++L+RALES +AP++I A+NRG IRGT SPHGIP+D Sbjct: 206 IIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTS-YQSPHGIPID 264 Query: 354 LLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPA 413 LLDR++I+ T Y+ ++ KQI++IR + E + +SE+A L IG +T+LRY++QL+T A Sbjct: 265 LLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAA 324 Query: 414 NLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYM 455 +L+ + ++ + ++ + LF D S + + + QD ++ Sbjct: 325 SLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFL 366 Score = 176 bits (447), Expect = 2e-44, Method: Composition-based stats. Identities = 67/125 (53%), Positives = 96/125 (76%) Query: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61 K+ E++ T+ +RI +HSH++GLGLD++ +QA+ G+VGQ AR A GV++E+I+ K+ Sbjct: 24 KVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKI 83 Query: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIG 121 AGRAVL+AG PGTGKTA+A+ +AQ LG PF + GSE++S E+ KTE L + FRR+IG Sbjct: 84 AGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIG 143 Query: 122 LRIKE 126 +RIKE Sbjct: 144 VRIKE 148 >1HQC-A nrPDB Length = 324 Score = 148 bits (374), Expect = 4e-36, Method: Composition-based stats. Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 20/159 (12%) Query: 277 GEINKVVNKYIDQGVAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNC 336 G++ ++ +++G +LF+DE+H L + +L+ A+E + IVI Sbjct: 78 GDLAAILANSLEEG------DILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAART 131 Query: 337 V---------IRGTEDITSPHGIPLDLLDRVMIIRTM-LYTPQEMKQIIKIRAQTEGINI 386 + I T T P I LL R I+ + YTP+E+ Q + A+ G+ I Sbjct: 132 IRLELPRFTLIGAT---TRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRI 188 Query: 387 SEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSI 425 +EEA +G ++ T+R + +L A++ G++ I Sbjct: 189 TEEAALEIGR-RSRGTMRVAKRLFRRVRDFAQVAGEEVI 226 Score = 70.9 bits (172), Expect = 1e-12, Method: Composition-based stats. Identities = 24/66 (36%), Positives = 36/66 (54%) Query: 26 LDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQ 85 +++ L + +GQE ++ V +E K++K +LL GPPG GKT LA IA Sbjct: 1 MEDLALRPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAH 60 Query: 86 ELGSKV 91 ELG + Sbjct: 61 ELGVNL 66 >1XWI-A nrPDB Length = 322 Score = 119 bits (299), Expect = 2e-27, Method: Composition-based stats. Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 18/169 (10%) Query: 32 AKQAASGLVGQENAREACGVIV-------ELIKSKKMAGRAVLLAGPPGTGKTALALAIA 84 S + G E A+EA V L K+ R +LL GPPGTGK+ LA A+A Sbjct: 7 PNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVA 66 Query: 85 QELGSKVPFCPMVGSEVYSTEIKKTEVLMEN-FRRAIGLRIKETKEVYEGEVTELTPCET 143 E + F + S++ S + ++E L++N F+ A R + ++ E+ L + Sbjct: 67 TEANNST-FFSISSSDLVSKWLGESEKLVKNLFQLA---RENKPSIIFIDEIDSLCGSRS 122 Query: 144 ENPMGGYGKTISHVIIGLK--TAKGTKQLKLD----PSIFESLQKERVE 186 EN + + ++ ++ L L P + +S + R E Sbjct: 123 ENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFE 171 >2X8A-A nrPDB Length = 274 Score = 119 bits (297), Expect = 3e-27, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 14/150 (9%) Query: 30 GLAKQAASGLVGQENAREACGV-IVELIKSKKMAGR-------AVLLAGPPGTGKTALAL 81 + + + E+ RE + I+ +++ VLLAGPPG GKT LA Sbjct: 3 TVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAK 62 Query: 82 AIAQELGSKVPFCPMVGSEVYSTEIKKTE-VLMENFRRAIGLRIKETKEVYEGEVTELTP 140 A+A E G + F + G E+ + + ++E + + F+RA + ++ EV L P Sbjct: 63 AVANESG--LNFISVKGPELLNMYVGESERAVRQVFQRA---KNSAPCVIFFDEVDALCP 117 Query: 141 CETENPMGGYGKTISHVIIGLKTAKGTKQL 170 ++ G + ++ ++ + + +Q+ Sbjct: 118 RRSDRETGASVRVVNQLLTEMDGLEARQQV 147 >2ZAO-A nrPDB Length = 444 Score = 117 bits (294), Expect = 7e-27, Method: Composition-based stats. Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 18/169 (10%) Query: 32 AKQAASGLVGQENAREACGVIV-------ELIKSKKMAGRAVLLAGPPGTGKTALALAIA 84 S + G E A+EA V L K+ R +LL GPPGTGK+ LA A+A Sbjct: 129 PNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVA 188 Query: 85 QELGSKVPFCPMVGSEVYSTEIKKTEVLMEN-FRRAIGLRIKETKEVYEGEVTELTPCET 143 E + F + S++ S + ++E L++N F+ A R + ++ E+ L + Sbjct: 189 TEANNST-FFSISSSDLVSKWLGESEKLVKNLFQLA---RENKPSIIFIDEIDSLCGSRS 244 Query: 144 ENPMGGYGKTISHVIIGLK--TAKGTKQLKLD----PSIFESLQKERVE 186 EN + + ++ ++ L L P + +S + R E Sbjct: 245 ENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFE 293 >5OUN-A nrPDB Length = 107 Score = 117 bits (294), Expect = 8e-27, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 8/109 (7%) Query: 127 TKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVE 186 E+ EGEV E+ + GK + +KT +L + + L KE+V Sbjct: 5 ETELIEGEVVEIQIDRSITGGHKQGK------LTIKTTDMETIYELGNKMIDGLTKEKVL 58 Query: 187 AGDVIYIEANSGAVKRQGRCDTYATEFDLEAEE--YVPLPKGDVHKKKE 233 AGDVI I+ SG + + GR + ++D + +V P+G++ K+K Sbjct: 59 AGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKT 107 >5UBV-A nrPDB Length = 246 Score = 105 bits (262), Expect = 3e-23, Method: Composition-based stats. Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 15/163 (9%) Query: 36 ASGLVGQENAREACGVIVELIKSKKMAG-------RAVLLAGPPGTGKTALALAIAQELG 88 S + G + A+E +VE +++ + + VLL GPPGTGKT LA A+A E G Sbjct: 5 FSDVHGCDEAKEELQELVEFLRNPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAG 64 Query: 89 SKVPFCPMVGSEVYSTEIK-KTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPM 147 VPF M GSE + + + E F A + K V+ E+ + Sbjct: 65 --VPFFYMSGSEFDEIYVGVGAKRVRELFNAA---KAKAPSIVFIDELDAIGGRRNSRDA 119 Query: 148 GGYGKTISHVIIGLKT-AKGTKQLKLDPSIF-ESLQKERVEAG 188 +T++ ++ + A+ + + L + F ESL K G Sbjct: 120 TYVRQTLNQLLTEMDGFAQNSGVIILGATNFPESLDKALTRPG 162 >1LV7-A nrPDB Length = 257 Score = 102 bits (255), Expect = 3e-22, Method: Composition-based stats. Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 16/147 (10%) Query: 33 KQAASGLVGQENAREACGVIVELIKSK----KMAGR---AVLLAGPPGTGKTALALAIAQ 85 K + + G + A+E +VE ++ K+ G+ VL+ GPPGTGKT LA AIA Sbjct: 8 KTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAG 67 Query: 86 ELGSKVPFCPMVGSEVYSTEIK-KTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETE 144 E +KVPF + GS+ + + + F +A + ++ E+ + Sbjct: 68 E--AKVPFFTISGSDFVEMFVGVGASRVRDMFEQA---KKAAPCIIFIDEIDAVGRQRGA 122 Query: 145 NPMGGYG---KTISHVIIGLKTAKGTK 168 GG+ +T++ +++ + +G + Sbjct: 123 GLGGGHDEREQTLNQMLVEMDGFEGNE 149 >6AP1-A nrPDB Length = 519 Score = 102 bits (255), Expect = 3e-22, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 59/145 (40%), Gaps = 11/145 (7%) Query: 32 AKQAASGLVGQENAREACGVIV-------ELIKSKKMAGRAVLLAGPPGTGKTALALAIA 84 + G E A+EA V L K + +LL GPPGTGK+ LA A+A Sbjct: 29 PNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVA 88 Query: 85 QELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETE 144 E + F + S++ S + ++E L++ + R + ++ EV LT E Sbjct: 89 TE--ANSTFFSVSSSDLVSKWMGESEKLVK--QLFAMARENKPSIIFIDEVDALTGTRGE 144 Query: 145 NPMGGYGKTISHVIIGLKTAKGTKQ 169 + + +++ + Q Sbjct: 145 GESEASRRIKTELLVQMNGVGNDSQ 169 >3EIH-A nrPDB Length = 340 Score = 101 bits (252), Expect = 6e-22, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 11/145 (7%) Query: 32 AKQAASGLVGQENAREACGVIV-------ELIKSKKMAGRAVLLAGPPGTGKTALALAIA 84 + G E A+EA V L K + +LL GPPGTGK+ LA A+A Sbjct: 31 PNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVA 90 Query: 85 QELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETE 144 E + F + S++ S + ++E L++ + R + ++ +V LT E Sbjct: 91 TE--ANSTFFSVSSSDLVSKWMGESEKLVK--QLFAMARENKPSIIFIDQVDALTGTRGE 146 Query: 145 NPMGGYGKTISHVIIGLKTAKGTKQ 169 + + +++ + Q Sbjct: 147 GESEASRRIKTELLVQMNGVGNDSQ 171 >5XMK-A nrPDB Length = 437 Score = 100 bits (250), Expect = 1e-21, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 11/145 (7%) Query: 32 AKQAASGLVGQENAREACGVIV-------ELIKSKKMAGRAVLLAGPPGTGKTALALAIA 84 + G E A+EA V L K + +LL GPPGTGK+ LA A+A Sbjct: 128 PNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVA 187 Query: 85 QELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETE 144 E + F + S++ S + ++E L++ + R + ++ +V LT E Sbjct: 188 TE--ANSTFFSVSSSDLVSKWMGESEKLVK--QLFAMARENKPSIIFIDQVDALTGTRGE 243 Query: 145 NPMGGYGKTISHVIIGLKTAKGTKQ 169 + + +++ + Q Sbjct: 244 GESEASRRIKTELLVQMNGVGNDSQ 268 >6MAT-A nrPDB Length = 813 Score = 97.5 bits (241), Expect = 1e-20, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 74/179 (41%), Gaps = 19/179 (10%) Query: 29 SGLAKQAASGLVGQENAREACGV-IVELIKSKKMAGR-------AVLLAGPPGTGKTALA 80 S + S + E+ R+ + I+ IK+ ++ R +LL GPPG GKT +A Sbjct: 493 STIPDTTWSHVGALEDVRKKLEMSIIGPIKNPELFTRVGIKPAAGILLWGPPGCGKTLVA 552 Query: 81 LAIAQELGSKVPFCPMVGSEVYSTEIKKTE-VLMENFRRAIGLRIKETKEVYEGEVTELT 139 A+A E + F + G E+ + + ++E + + F RA + ++ ++ L Sbjct: 553 KAVANESKAN--FISIKGPELLNKYVGESERAVRQLFSRA---KSSAPCILFFDQMDALV 607 Query: 140 PCETENPMGGYGKTISHVIIGLKTA-KGTKQLKLD----PSIFESLQKERVEAGDVIYI 193 P ++ + ++ ++ L + + P + + + G IY+ Sbjct: 608 PRRDDSLSDASARVVNTLLTELDGVGDRSGIYVIGATNRPDMIDEAIRRPGRLGTSIYV 666 Score = 65.9 bits (159), Expect = 3e-11, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 6/115 (5%) Query: 57 KSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEV-LMEN 115 K VLL GP G GKT LA AIA +G V F P+ V ++E + + Sbjct: 230 KMGYRYDNGVLLHGPSGCGKTTLAHAIAGSIG--VAFIPVSAPSVIGGTSGESEKNIRDV 287 Query: 116 FRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQL 170 F AI L ++ ++ + G + ++ ++ G+ + L Sbjct: 288 FDEAIRL---APCLIFLDQIDAIAGRRESANKGMESRIVAEIMNGMDRIRQNTPL 339 >2CE7-A nrPDB Length = 476 Score = 96.7 bits (239), Expect = 2e-20, Method: Composition-based stats. Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 16/151 (10%) Query: 29 SGLAKQAASGLVGQENAREACGVIVELIKSKKMAGR-------AVLLAGPPGTGKTALAL 81 SG + + G E A E +VE +K R +LL GPPGTGKT LA Sbjct: 8 SGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLAR 67 Query: 82 AIAQELGSKVPFCPMVGSEVYSTEIKKTEV-LMENFRRAIGLRIKETKEVYEGEVTELTP 140 A+A E + VPF + GS+ + + + F +A + V+ E+ + Sbjct: 68 AVAGE--ANVPFFHISGSDFVELFVGVGAARVRDLFAQA---KAHAPCIVFIDEIDAVGR 122 Query: 141 CETENPMGGYG---KTISHVIIGLKTAKGTK 168 GG+ +T++ +++ + + Sbjct: 123 HRGAGLGGGHDEREQTLNQLLVEMDGFDSKE 153 >3CF0-A nrPDB Length = 301 Score = 96.3 bits (238), Expect = 2e-20, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 78/208 (37%), Gaps = 27/208 (12%) Query: 31 LAKQAASGLVGQENAREACGVIVE--------LIKSKKMAGRAVLLAGPPGTGKTALALA 82 + + + G E+ + +V+ +K + VL GPPG GKT LA A Sbjct: 9 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 68 Query: 83 IAQELGSKVPFCPMVGSEVYSTEIKKTEV-LMENFRRAIGLRIKETKEVYEGEVTELTPC 141 IA E + F + G E+ + ++E + E F +A R ++ E+ + Sbjct: 69 IANECQAN--FISIKGPELLTMWFGESEANVREIFDKA---RQAAPCVLFFDELDSIAKA 123 Query: 142 E---TENPMGGYGKTISHVIIGLKTAKGTKQLKL-----DPSIFESLQKERVEAGDVIYI 193 + G + I+ ++ + K + + P I + +IYI Sbjct: 124 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 183 Query: 194 ----EANSGAVKRQG-RCDTYATEFDLE 216 E + A+ + R A + DLE Sbjct: 184 PLPDEKSRVAILKANLRKSPVAKDVDLE 211 >2CQA-A nrPDB Length = 95 Score = 96.0 bits (237), Expect = 3e-20, Method: Composition-based stats. Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 5/94 (5%) Query: 119 AIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFE 178 + G KE E+ EGEV E+ + + P G G + + LKT + L + E Sbjct: 2 SSGSSGKEETEIIEGEVVEI---QIDRPATGTGSKVGKL--TLKTTEMETIYDLGTKMIE 56 Query: 179 SLQKERVEAGDVIYIEANSGAVKRQGRCDTYATE 212 SL K++V+AGDVI I+ +G + + GR T A Sbjct: 57 SLTKDKVQAGDVITIDKATGKISKLGRSFTRARS 90 >5C18-A nrPDB Length = 785 Score = 95.6 bits (236), Expect = 4e-20, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 78/208 (37%), Gaps = 27/208 (12%) Query: 31 LAKQAASGLVGQENAREACGVIVE--------LIKSKKMAGRAVLLAGPPGTGKTALALA 82 + + + G E+ + +V+ +K + VL GPPG GKT LA A Sbjct: 470 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 529 Query: 83 IAQELGSKVPFCPMVGSEVYSTEIKKTEV-LMENFRRAIGLRIKETKEVYEGEVTELTPC 141 IA E + F + G E+ + ++E + E F +A R ++ E+ + Sbjct: 530 IANECQAN--FISIKGPELLTMWFGESEANVREIFDKA---RQAAPCVLFFDELDSIAKA 584 Query: 142 E---TENPMGGYGKTISHVIIGLKTAKGTKQLKL-----DPSIFESLQKERVEAGDVIYI 193 + G + I+ ++ + K + + P I + +IYI Sbjct: 585 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 644 Query: 194 ----EANSGAVKRQG-RCDTYATEFDLE 216 E + A+ + R A + DLE Sbjct: 645 PLPDEKSRVAILKANLRKSPVAKDVDLE 672 Score = 90.6 bits (223), Expect = 1e-18, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 14/153 (9%) Query: 27 DESGLAKQAASGLVGQENAREACGVIVEL-IKSKKM-------AGRAVLLAGPPGTGKTA 78 +E L + + G +VEL ++ + R +LL GPPGTGKT Sbjct: 193 EEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTL 252 Query: 79 LALAIAQELGSKVPFCPMVGSEVYSTEIKKTEV-LMENFRRAIGLRIKETKEVYEGEVTE 137 +A A+A E G+ F + G E+ S ++E L + F A ++ E+ Sbjct: 253 IARAVANETGAF--FFLINGPEIMSKLAGESESNLRKAFEEA---EKNAPAIIFIDELDA 307 Query: 138 LTPCETENPMGGYGKTISHVIIGLKTAKGTKQL 170 + P + + +S ++ + K + Sbjct: 308 IAPKREKTHGEVERRIVSQLLTLMDGLKQRAHV 340 >6MCK-A nrPDB Length = 606 Score = 95.6 bits (236), Expect = 4e-20, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 78/208 (37%), Gaps = 27/208 (12%) Query: 31 LAKQAASGLVGQENAREACGVIVE--------LIKSKKMAGRAVLLAGPPGTGKTALALA 82 + + + G E+ + +V+ +K + VL GPPG GKT LA A Sbjct: 263 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 322 Query: 83 IAQELGSKVPFCPMVGSEVYSTEIKKTEV-LMENFRRAIGLRIKETKEVYEGEVTELTPC 141 IA E + F + G E+ + ++E + E F +A R ++ E+ + Sbjct: 323 IANECQAN--FISIKGPELLTMWFGESEANVREIFDKA---RQAAPCVLFFDELDSIAKA 377 Query: 142 E---TENPMGGYGKTISHVIIGLKTAKGTKQLKL-----DPSIFESLQKERVEAGDVIYI 193 + G + I+ ++ + K + + P I + +IYI Sbjct: 378 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 437 Query: 194 ----EANSGAVKRQG-RCDTYATEFDLE 216 E + A+ + R A + DLE Sbjct: 438 PLPDEKSRVAILKANLRKSPVAKDVDLE 465 Score = 88.3 bits (217), Expect = 7e-18, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 6/110 (5%) Query: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEV-LMENFRRAI 120 R +LL GPPGTGKT +A A+A E G+ F + G E+ S ++E L + F A Sbjct: 29 PPRGILLYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGESESNLRKAFEEA- 85 Query: 121 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQL 170 ++ E+ + P + + +S ++ + K + Sbjct: 86 --EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHV 133 >6AZ0-A nrPDB Length = 439 Score = 95.2 bits (235), Expect = 6e-20, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 13/136 (9%) Query: 36 ASGLVGQENAREACGVIVELIKSKKMAG-------RAVLLAGPPGTGKTALALAIAQELG 88 + G + AR IV+ +K + VLL GPPGTGKT LA A A E G Sbjct: 2 FDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGEAG 61 Query: 89 SKVPFCPMVGSEVYSTEIK-KTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPM 147 V F M GSE + + + + F +A R + ++ ++ + Sbjct: 62 --VDFFFMSGSEFDEVYVGVGAKRIRDLFAQA---RSRAPAIIFIDQLDAIGGKRNPKDQ 116 Query: 148 GGYGKTISHVIIGLKT 163 +T++ +++ L Sbjct: 117 AYAKQTLNQLLVELDG 132 >6CHS-H nrPDB Length = 819 Score = 92.9 bits (229), Expect = 2e-19, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 14/142 (9%) Query: 38 GLVGQENAREACGVIVEL-IKSKKM-------AGRAVLLAGPPGTGKTALALAIAQELGS 89 + G +VEL ++ ++ R VLL GPPGTGKT +A A+A E G+ Sbjct: 221 DIGGCRKQLAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGA 280 Query: 90 KVPFCPMVGSEVYSTEIKKTEV-LMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMG 148 F + G E+ S ++E L + F A ++ E+ + P + Sbjct: 281 F--FFLINGPEIMSKMAGESESNLRKAFEEA---EKNSPAIIFIDEIDSIAPKREKTNGE 335 Query: 149 GYGKTISHVIIGLKTAKGTKQL 170 + +S ++ + K + Sbjct: 336 VERRVVSQLLTLMDGMKARSNV 357 Score = 92.9 bits (229), Expect = 3e-19, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 58/152 (38%), Gaps = 17/152 (11%) Query: 31 LAKQAASGLVGQENAREACGVIVE--------LIKSKKMAGRAVLLAGPPGTGKTALALA 82 + + G E ++ V+ +K R VL GPPGTGKT LA A Sbjct: 488 VPNVRWEDIGGLEQVKQELKEQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKA 547 Query: 83 IAQELGSKVPFCPMVGSEVYSTEIKKTEV-LMENFRRAIGLRIKETKEVYEGEVTELTPC 141 +A E + F + G E+ S ++E + + F +A R V+ E+ + Sbjct: 548 VANECAAN--FISVKGPELLSMWFGESESNIRDIFDKA---RAAAPCVVFLDELDSIAKA 602 Query: 142 ETENP---MGGYGKTISHVIIGLKTAKGTKQL 170 + G + ++ ++ + K + Sbjct: 603 RGGSIGDAGGASDRVVNQLLTEMDGMTSKKNV 634 >5VC7-A nrPDB Length = 564 Score = 91.3 bits (225), Expect = 7e-19, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 15/145 (10%) Query: 31 LAKQAASGLVGQENAREACGVIVE--------LIKSKKMAGRAVLLAGPPGTGKTALALA 82 + + G E+ + VE + + LL GPPG GKT LA A Sbjct: 280 VPNVHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKA 339 Query: 83 IAQELGSKVPFCPMVGSEVYSTEIKKTE-VLMENFRRAIGLRIKETKEVYEGEVTELTPC 141 +A E + F + G EV S + ++E + E F++A + V+ E+ + P Sbjct: 340 VATESNAN--FISIKGPEVLSKWVGESEKAIREIFKKA---KQVAPAIVFLDEIDSIAPR 394 Query: 142 E-TENPMGGYGKTISHVIIGLKTAK 165 T + G + ++ ++ L + Sbjct: 395 RGTTSDSGVTERIVNQLLTSLDGIE 419 Score = 89.4 bits (220), Expect = 3e-18, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 82/214 (38%), Gaps = 39/214 (18%) Query: 31 LAKQAASGLVGQENAREACGVIVE--------LIKSKKMAGRAVLLAGPPGTGKTALALA 82 +++ + + G ++E + + V+L GPPGTGKT +A A Sbjct: 3 VSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARA 62 Query: 83 IAQELGSKVPFCPMVGSEVYSTEIKKTE-VLMENFRRAIGLRIKETKEVYEGEVTELTPC 141 +A E G+ F + G E+ S ++E L E F +A ++ E+ + P Sbjct: 63 VANESGAN--FLSINGPEIMSKYYGQSEQKLREIFSKA---EETAPSIIFIDEIDSIAPK 117 Query: 142 ETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVK 201 E + ++ ++ + K + + G I+A A++ Sbjct: 118 REEVQGEVERRVVAQLLTLMDGMKERGHV--------------IVIGATNRIDAIDPALR 163 Query: 202 RQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEII 235 R GR FD E E VP G +KEI+ Sbjct: 164 RPGR-------FDREIEIGVPDRNG----RKEIL 186 >6BLB-A nrPDB Length = 355 Score = 90.6 bits (223), Expect = 1e-18, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 22/180 (12%) Query: 256 ILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAELVPGVLFVDEVHMLDIECFTYL 315 I MG +K + ++ G++ ++ ++ G VLFVDE+H L L Sbjct: 79 IAQEMGVSIKSTSGPVLER-PGDLAALLTN-LEAG------DVLFVDEIHRLSPIVEEVL 130 Query: 316 HRALESSIAPIVIFASNRGNCV---------IRGTEDITSPHGIPLDLLDRVMIIRTM-L 365 + A+E I+I + + T T + L DR I++ + Sbjct: 131 YPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGAT---TRAGMLTNPLRDRFGIVQRLEF 187 Query: 366 YTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSI 425 Y +++ I+ A G+ I + + + + T R + +LL A++ G+ I Sbjct: 188 YNVEDLATIVSRSAGILGLEIEPQGAAEIAK-RARGTPRIANRLLRRVRDFAEVRGQGDI 246 Score = 69.8 bits (169), Expect = 3e-12, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 26 LDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQ 85 LD + + + +GQ + RE + + + ++ A L+ GPPG GKT LA IAQ Sbjct: 23 LDRAIRPLKL-ADYIGQPSVREQMELFIHAARGRQEALDHTLIFGPPGLGKTTLANIIAQ 81 Query: 86 ELGSKV 91 E+G + Sbjct: 82 EMGVSI 87 >5G4G-A nrPDB Length = 721 Score = 90.2 bits (222), Expect = 2e-18, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 15/145 (10%) Query: 31 LAKQAASGLVGQENAREACGVIVE--------LIKSKKMAGRAVLLAGPPGTGKTALALA 82 + + G E+ + VE + + LL GPPG GKT LA A Sbjct: 456 VPNVHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKA 515 Query: 83 IAQELGSKVPFCPMVGSEVYSTEIKKTE-VLMENFRRAIGLRIKETKEVYEGEVTELTPC 141 +A E + F + G EV S + ++E + E F++A + V+ E+ + P Sbjct: 516 VATESNAN--FISIKGPEVLSKWVGESEKAIREIFKKA---KQVAPAIVFLDEIDSIAPR 570 Query: 142 E-TENPMGGYGKTISHVIIGLKTAK 165 T + G + ++ ++ L + Sbjct: 571 RGTTSDSGVTERIVNQLLTSLDGIE 595 Score = 87.9 bits (216), Expect = 9e-18, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 82/214 (38%), Gaps = 39/214 (18%) Query: 31 LAKQAASGLVGQENAREACGVIVE--------LIKSKKMAGRAVLLAGPPGTGKTALALA 82 +++ + + G ++E + + V+L GPPGTGKT +A A Sbjct: 179 VSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARA 238 Query: 83 IAQELGSKVPFCPMVGSEVYSTEIKKTE-VLMENFRRAIGLRIKETKEVYEGEVTELTPC 141 +A E G+ F + G E+ S ++E L E F +A ++ E+ + P Sbjct: 239 VANESGAN--FLSINGPEIMSKYYGQSEQKLREIFSKA---EETAPSIIFIDEIDSIAPK 293 Query: 142 ETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVK 201 E + ++ ++ + K + + G I+A A++ Sbjct: 294 REEVQGEVERRVVAQLLTLMDGMKERGHV--------------IVIGATNRIDAIDPALR 339 Query: 202 RQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEII 235 R GR FD E E VP G +KEI+ Sbjct: 340 RPGR-------FDREIEIGVPDRNG----RKEIL 362 >3HU1-A nrPDB Length = 489 Score = 89.8 bits (221), Expect = 2e-18, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 14/153 (9%) Query: 27 DESGLAKQAASGLVGQENAREACGVIVEL-IKSKKM-------AGRAVLLAGPPGTGKTA 78 +E L + + G +VEL ++ + R +LL GPPGTGKT Sbjct: 194 EEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTL 253 Query: 79 LALAIAQELGSKVPFCPMVGSEVYSTEIKKTEV-LMENFRRAIGLRIKETKEVYEGEVTE 137 +A A+A E G+ F + G E+ S ++E L + F A ++ E+ Sbjct: 254 IARAVANETGAF--FFLINGPEIMSKLAGESESNLRKAFEEA---EKNAPAIIFIDELDA 308 Query: 138 LTPCETENPMGGYGKTISHVIIGLKTAKGTKQL 170 + P + + +S ++ + K + Sbjct: 309 IAPKREKTHGEVERRIVSQLLTLMDGLKQRAHV 341 >2R65-A nrPDB Length = 268 Score = 89.0 bits (219), Expect = 3e-18, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 17/144 (11%) Query: 32 AKQAASGLVGQENAREACGVIVELIKSKKMAG-------RAVLLAGPPGTGKTALALAIA 84 + G E A+E IV+ +K + + VLL GPPGTGKT LA A+A Sbjct: 6 PNVRFKDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVA 65 Query: 85 QELGSKVPFCPMVGSEVYSTEIK-KTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCET 143 E + VPF M GS + + + F A + + ++ E+ + Sbjct: 66 GE--AHVPFFSMGGSSFIEMFVGLGASRVRDLFETA---KKQAPSIIFIDEIDAIGKSRA 120 Query: 144 ----ENPMGGYGKTISHVIIGLKT 163 + +T++ ++ + Sbjct: 121 AGGVVSGNDEREQTLNQLLAEMDG 144 >5Z6Q-A nrPDB Length = 392 Score = 87.5 bits (215), Expect = 1e-17, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 11/137 (8%) Query: 36 ASGLVGQENAREACGVIV-------ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELG 88 + GQ+ A++A IV EL + R +LL GPPG GKT LA A+A E Sbjct: 117 FDDIAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESN 176 Query: 89 SKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMG 148 + F + + + S + + E L+ R + ++ EV L E Sbjct: 177 AT--FFNISAASLTSKYVGEGEKLVRALFAV--ARELQPSIIFIDEVDSLLCERREGEHD 232 Query: 149 GYGKTISHVIIGLKTAK 165 + + +I + Sbjct: 233 ASRRLKTEFLIEFDGVQ 249 >6B5C-A nrPDB Length = 307 Score = 87.1 bits (214), Expect = 1e-17, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 64/165 (38%), Gaps = 17/165 (10%) Query: 25 GLDESGLAKQAA---SGLVGQENAREACGVIV-------ELIKSKKMAGRAVLLAGPPGT 74 L+ +++ + + E A++ V + K + + VL+ GPPGT Sbjct: 10 ALERDIVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFKGIRRPWKGVLMVGPPGT 69 Query: 75 GKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLME-NFRRAIGLRIKETKEVYEG 133 GKT LA A+A E G+ F + S + S ++E L+ F A R ++ Sbjct: 70 GKTMLAKAVATECGTT--FFNVSSSTLTSKYRGESEKLVRLLFEMA---RFYAPTTIFID 124 Query: 134 EVTELTPCE-TENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIF 177 ++ + T + + S ++I + G + + Sbjct: 125 QIDSICSRRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMV 169 >5ZQM-A nrPDB Length = 309 Score = 85.9 bits (211), Expect = 3e-17, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 79/219 (36%), Gaps = 35/219 (15%) Query: 38 GLVGQENAREACGVIV-------ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSK 90 + A++ V E K + + VL+ GPPGTGKT LA A+A E K Sbjct: 30 DIADLVEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATEC--K 87 Query: 91 VPFCPMVGSEVYSTEIKKTEVLME-NFRRAIGLRIKETKEVYEGEVTELTPCE-TENPMG 148 F + S + S ++E L+ F A R ++ E+ + T Sbjct: 88 TTFFNVSSSTLTSKYRGESEKLVRLLFEMA---RFYSPATIFIDEIDSICSRRGTSEEHE 144 Query: 149 GYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDT 208 + + +++ + GT + + L A Sbjct: 145 ASRRVKAELLVQMDGVGGTSENDDPSKMVMVL------------------AATNFPWDID 186 Query: 209 YATEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVAN 247 A LE Y+PLP K +E + ++L +L++A+ Sbjct: 187 EALRRRLEKRIYIPLPSA---KGREELLRISLRELELAD 222 >6EPC-H nrPDB Length = 433 Score = 85.2 bits (209), Expect = 6e-17, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 14/144 (9%) Query: 32 AKQAASGLVGQENAREACGVIVE--------LIKSKKMAGRAVLLAGPPGTGKTALALAI 83 S + G + E +VE + + VLL GPPGTGKT A A+ Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229 Query: 84 AQELGSKVPFCPMVGSEVYSTEIKK-TEVLMENFRRAIGLRIKETKEVYEGEVTELTPCE 142 A + F P++GSE+ + + ++ E F A R K+ ++ E+ + Sbjct: 230 ANR--TDACFIPVIGSELVQKYVGEGARMVRELFEMA---RTKKACLIFFDEIDAIGGAR 284 Query: 143 TENPMGGYGKTISHVIIGLKTAKG 166 ++ GG + ++ + G Sbjct: 285 FDDGAGGDNEVQRTMLELINQLDG 308 >2QZ4-A nrPDB Length = 262 Score = 84.8 bits (208), Expect = 8e-17, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 78/214 (36%), Gaps = 42/214 (19%) Query: 35 AASGLVGQENAREACGVIVELIKSKKMAG-------RAVLLAGPPGTGKTALALAIAQEL 87 + + G A+ V+ +KS + + LL GPPG GKT LA A+A E Sbjct: 4 SFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATE- 62 Query: 88 GSKVPFCPMVGSEVYSTEIKKTEV-LMENFRRAIGLRIKETKEVYEGEVTELTPCETENP 146 ++VPF M G+E + F+ A R + VY E+ + + Sbjct: 63 -AQVPFLAMAGAEFVEVIGGLGAARVRSLFKEA---RARAPCIVYIDEIDAVGKKRSTTM 118 Query: 147 MGGYG----KTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKR 202 G +T++ +++ + + + GA+ R Sbjct: 119 SGFSNTEEEQTLNQLLVEMDGM--------------GTTDHVIVLASTNRADILDGALMR 164 Query: 203 QGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQ 236 GR D + ++ LP + +++EI + Sbjct: 165 PGRLDRHV---------FIDLPT--LQERREIFE 187 >6EF0-L nrPDB Length = 273 Score = 84.4 bits (207), Expect = 1e-16, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 83/213 (38%), Gaps = 41/213 (19%) Query: 35 AASGLVGQENAREACGVIVEL-IKSKKM-------AGRAVLLAGPPGTGKTALALAIAQE 86 G+ G ++EL +K+ ++ + VLL GPPGTGKT LA A+A Sbjct: 16 TFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAAT 75 Query: 87 LGSKVPFCPMVGSEVYSTEIKKT-EVLMENFRRAIGLRIKETKEVYEGEVTELTPCETEN 145 +G+ F P G + I ++ ++ E F A + E ++ EV + Sbjct: 76 IGANFIFSPASG--IVDKYIGESARIIREMFAYA---KEHEPCIIFMDEVDAIGGRRFSE 130 Query: 146 PMGGY---GKTISHVIIGLKTAKGTKQLK----------LDPSIFESLQKERV------- 185 +T+ ++ + Q K LDP++ + +R Sbjct: 131 GTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPN 190 Query: 186 EAGDVIYIEANSGAVKRQGRCDTYATEFDLEAE 218 EAG + + ++ VK+ G EFD EA Sbjct: 191 EAGRLEIFKIHTAKVKKTG-------EFDFEAA 216 >5VFU-A nrPDB Length = 361 Score = 84.0 bits (206), Expect = 1e-16, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 14/144 (9%) Query: 32 AKQAASGLVGQENAREACGVIVE--------LIKSKKMAGRAVLLAGPPGTGKTALALAI 83 S + G + E +VE + + VLL GPPGTGKT A A+ Sbjct: 98 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 157 Query: 84 AQELGSKVPFCPMVGSEVYSTEIKK-TEVLMENFRRAIGLRIKETKEVYEGEVTELTPCE 142 A + F ++GSE+ + + ++ E F A R K+ ++ E+ + Sbjct: 158 ANR--TDACFIRVIGSELVQKYVGEGARMVRELFEMA---RTKKACLIFFDEIDAIGGAR 212 Query: 143 TENPMGGYGKTISHVIIGLKTAKG 166 ++ GG + ++ + G Sbjct: 213 FDDGAGGDNEVQRTMLELINQLDG 236 >3H4M-A nrPDB Length = 285 Score = 84.0 bits (206), Expect = 1e-16, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 67/164 (40%), Gaps = 17/164 (10%) Query: 21 VKGLGLDESGLAKQAASGLVGQENAREACGVIVE--------LIKSKKMAGRAVLLAGPP 72 ++ ++ + G E + +VE K + +LL GPP Sbjct: 1 MRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPP 60 Query: 73 GTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMEN-FRRAIGLRIKETKEVY 131 GTGKT LA A+A E + F +VGSE+ I + L+++ F+ A + K ++ Sbjct: 61 GTGKTLLAKAVATETNAT--FIRVVGSELVKKFIGEGASLVKDIFKLA---KEKAPSIIF 115 Query: 132 EGEVTELTPCETENPMGGY---GKTISHVIIGLKTAKGTKQLKL 172 E+ + T+ GG +T+ ++ + +K+ Sbjct: 116 IDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKI 159 >1IN6-A nrPDB Length = 334 Score = 83.6 bits (205), Expect = 2e-16, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 21/172 (12%) Query: 276 RGEINKVVNKYIDQGVAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGN 335 +G++ ++ +++G VLF+DE+H L+ L+ A+E I+I Sbjct: 90 QGDMAAILT-SLERG------DVLFIDEIHRLNKAVEELLYSAIEDFQIDIMIGKGPSAK 142 Query: 336 CV---------IRGTEDITSPHGIPLDLLDRVMIIRTM-LYTPQEMKQIIKIRAQTEGIN 385 + + T T + L R II + YT +E+K+IIK A + Sbjct: 143 SIRIDIQPFTLVGAT---TRSGLLSSPLRSRFGIILELDFYTVKELKEIIKRAASLMDVE 199 Query: 386 ISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELF 437 I + A + + ++ T R +++L + + D I + V + E+ Sbjct: 200 IEDAAAEMIAK-RSRGTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVL 250 Score = 66.7 bits (161), Expect = 2e-11, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 34/65 (52%) Query: 31 LAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSK 90 L ++ +GQEN ++ + +E K + VLLAGPPG G+T LA IA EL + Sbjct: 19 LRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGRTTLAHIIASELQTN 78 Query: 91 VPFCP 95 + Sbjct: 79 IHVTS 83 >4D81-A nrPDB Length = 283 Score = 83.6 bits (205), Expect = 2e-16, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 66/156 (42%), Gaps = 15/156 (9%) Query: 32 AKQAASGLVGQENAREACGVIVELIKSKK----MAG-RAVLLAGPPGTGKTALALAIAQE 86 K + +VG E+ +EA V + + R +LL GPPG GKT +A A+A E Sbjct: 9 PKVTLNEIVGLEDVKEALKEAVVYPSKRPDLFPLGWPRGILLYGPPGCGKTMIAAAVANE 68 Query: 87 LGSKVPFCPMVGSEVYSTEIKKTEV-LMENFR--RAIGLRIKETKEVYEGEVTELTPCET 143 L F + + + S + + E + + F+ R + + + ++ E+ L T Sbjct: 69 L--DSEFIHVDAASIMSKWLGEAEKNVAKIFKTARELSKKENKPAIIFIDELDALLASYT 126 Query: 144 ENPMGGYGKTISHVIIGLKTA----KGTKQLKLDPS 175 + +GG + + + + + +K + + Sbjct: 127 -SEVGGEARVRNQFLKEMDGLADKNEISKVYVIGAT 161 >5VHO-A nrPDB Length = 267 Score = 83.2 bits (204), Expect = 2e-16, Method: Composition-based stats. Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 14/144 (9%) Query: 32 AKQAASGLVGQENAREACGVIVE--------LIKSKKMAGRAVLLAGPPGTGKTALALAI 83 S + G + E +VE + + VLL GPPGTGKT A A+ Sbjct: 13 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 72 Query: 84 AQELGSKVPFCPMVGSEVYSTEIKK-TEVLMENFRRAIGLRIKETKEVYEGEVTELTPCE 142 A + F ++GSE+ + + ++ E F A R K+ ++ E+ + Sbjct: 73 ANR--TDACFIRVIGSELVQKYVGEGARMVRELFEMA---RTKKACLIFFDEIDAIGGAR 127 Query: 143 TENPMGGYGKTISHVIIGLKTAKG 166 ++ GG + ++ + G Sbjct: 128 FDDGAGGDNEVQRTMLELINQLDG 151 >3D8B-A nrPDB Length = 357 Score = 83.2 bits (204), Expect = 2e-16, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 75/211 (35%), Gaps = 36/211 (17%) Query: 32 AKQAASGLVGQENAREACGVIV-------ELIKSKKMAGRAVLLAGPPGTGKTALALAIA 84 + G E A+ IV ++ + + +LL GPPGTGKT + IA Sbjct: 79 PPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIA 138 Query: 85 QELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETE 144 + G+ F + S + S + + E ++ R ++ ++ E+ L + Sbjct: 139 SQSGAT--FFSISASSLTSKWVGEGEKMVRALFAV--ARCQQPAVIFIDEIDSLLSQRGD 194 Query: 145 NPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQG 204 + + ++ L A + ++R+ GA R Sbjct: 195 GEHESSRRIKTEFLVQLDGATTS-------------SEDRILV---------VGATNRPQ 232 Query: 205 RCDTYATEFDLEAEEYVPLPKGDVHKKKEII 235 D A L Y+PLP + +K+I+ Sbjct: 233 EIDEAARRR-LVKRLYIPLP--EASARKQIV 260 >4LCB-A nrPDB Length = 367 Score = 82.5 bits (202), Expect = 3e-16, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 11/140 (7%) Query: 32 AKQAASGLVGQENAREACGVIVELIKSKK----MAG-RAVLLAGPPGTGKTALALAIAQE 86 K + S +VG ++ +EA + + + R +LL GPPG GKT LA A+A E Sbjct: 94 PKVSFSDIVGLDDVKEALKEAIIYPSKRPDLFPLGWPRGILLYGPPGNGKTMLAAAVANE 153 Query: 87 LGSKVPFCPMVGSEVYSTEIKKTEVLME---NFRRAIGLRIKETKEVYEGEVTELTPCET 143 + F + + + S + + E + N R + + ++ E+ L T Sbjct: 154 I--DSYFIHVDAASIMSKWLGEAEKNVAKIFNTAREYSKKDNKPAIIFVDEIDALLGTYT 211 Query: 144 ENPMGGYGKTISHVIIGLKT 163 + +GG + + + + Sbjct: 212 -SEVGGEVRVRNQFLKEMDG 230 >1IY1-A nrPDB Length = 254 Score = 82.5 bits (202), Expect = 4e-16, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 14/147 (9%) Query: 32 AKQAASGLVGQENAREACGVIVELIKS----KKMAGR---AVLLAGPPGTGKTALALAIA 84 K + G E A+E IVE +K+ +M R VLL GPPG GKT LA A+A Sbjct: 11 PKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVA 70 Query: 85 QELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETE 144 E ++VPF GS+ + + + + V+ E+ + Sbjct: 71 GE--ARVPFITASGSDFVEMFVGVGAARVRDLFET--AKRHAPCIVFIDEIDAVGRKRGS 126 Query: 145 NPMGGYG---KTISHVIIGLKTAKGTK 168 GG +T++ +++ + + Sbjct: 127 GVGGGNDEREQTLNQLLVEMDGFEKDT 153 >6EF0-H nrPDB Length = 257 Score = 82.5 bits (202), Expect = 4e-16, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 17/153 (11%) Query: 32 AKQAASGLVGQENAREACGVIVE--------LIKSKKMAGRAVLLAGPPGTGKTALALAI 83 S + G ++ E +VE + +LL GPPGTGKT A A+ Sbjct: 4 PDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAV 63 Query: 84 AQELGSKVPFCPMVGSEVYSTEIKK-TEVLMENFRRAIGLRIKETKEVYEGEVTELTPCE 142 A + F ++GSE+ + + ++ E F A R K+ ++ E+ + Sbjct: 64 ANR--TDATFIRVIGSELVQKYVGEGARMVRELFEMA---RTKKACIIFFDEIDAVGGAR 118 Query: 143 TENPMGGYG---KTISHVIIGLKTAKGTKQLKL 172 ++ GG +T+ +I L +K+ Sbjct: 119 FDDGAGGDNEVQRTMLELITQLDGFDPRGNIKV 151 >4LGM-A nrPDB Length = 295 Score = 82.5 bits (202), Expect = 4e-16, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 57/141 (40%), Gaps = 11/141 (7%) Query: 32 AKQAASGLVGQENAREACGVIVELIKSKK----MAG-RAVLLAGPPGTGKTALALAIAQE 86 K + +VG ++ +EA + + + R +LL GPPG GKT +A A+A E Sbjct: 21 PKVSFKDIVGLDDVKEALREAIIYPTKRPDLFPLGWPRGILLYGPPGCGKTMIAAAVANE 80 Query: 87 LGSKVPFCPMVGSEVYSTEIKKTEVLMEN---FRRAIGLRIKETKEVYEGEVTELTPCET 143 + F + + V S + + E + N R + + ++ ++ L + Sbjct: 81 I--DSIFMQLDAASVMSKWLGEAEKNVANVFKMAREESKKQNKPAIIFIDQLDALLGVYS 138 Query: 144 ENPMGGYGKTISHVIIGLKTA 164 +GG + + + + Sbjct: 139 -TEVGGEARVRNQFLKEMDGL 158 >6FVU-L nrPDB Length = 388 Score = 82.5 bits (202), Expect = 4e-16, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 83/213 (38%), Gaps = 41/213 (19%) Query: 35 AASGLVGQENAREACGVIVEL-IKSKKM-------AGRAVLLAGPPGTGKTALALAIAQE 86 G+ G ++EL +K+ ++ + VLL GPPGTGKT LA A+A Sbjct: 131 TFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAAT 190 Query: 87 LGSKVPFCPMVGSEVYSTEIKKT-EVLMENFRRAIGLRIKETKEVYEGEVTELTPCETEN 145 +G+ F P G + I ++ ++ E F A + E ++ EV + Sbjct: 191 IGANFIFSPASG--IVDKYIGESARIIREMFAYA---KEHEPCIIFMDEVDAIGGRRFSE 245 Query: 146 PMGGY---GKTISHVIIGLKTAKGTKQLK----------LDPSIFESLQKERV------- 185 +T+ ++ + Q K LDP++ + +R Sbjct: 246 GTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPN 305 Query: 186 EAGDVIYIEANSGAVKRQGRCDTYATEFDLEAE 218 EAG + + ++ VK+ G EFD EA Sbjct: 306 EAGRLEIFKIHTAKVKKTG-------EFDFEAA 331 >3WHK-A nrPDB Length = 270 Score = 82.1 bits (201), Expect = 4e-16, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 17/161 (10%) Query: 24 LGLDESGLAKQAASGLVGQENAREACGVIVEL-IKSKKM-------AGRAVLLAGPPGTG 75 +G + + + G + + +EL +K ++ + VLL GPPG G Sbjct: 4 MGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCG 63 Query: 76 KTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLM-ENFRRAIGLRIKETKEVYEGE 134 KT +A AIA E+ + F +VGSE+ I + L+ E F A + K ++ E Sbjct: 64 KTLMAKAIAHEVNAT--FIRVVGSELVRKYIGEGARLVHELFELA---KEKAPTIIFIDE 118 Query: 135 VTELTPCETENPMGGY---GKTISHVIIGLKTAKGTKQLKL 172 + + + GG +T+ ++ + +K+ Sbjct: 119 IDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKV 159 >5WVI-L nrPDB Length = 437 Score = 82.1 bits (201), Expect = 5e-16, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 83/213 (38%), Gaps = 41/213 (19%) Query: 35 AASGLVGQENAREACGVIVEL-IKSKKM-------AGRAVLLAGPPGTGKTALALAIAQE 86 G+ G ++EL +K+ ++ + VLL GPPGTGKT LA A+A Sbjct: 179 TFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAAT 238 Query: 87 LGSKVPFCPMVGSEVYSTEIKKT-EVLMENFRRAIGLRIKETKEVYEGEVTELTPCETEN 145 +G+ F P G + I ++ ++ E F A + E ++ EV + Sbjct: 239 IGANFIFSPASG--IVDKYIGESARIIREMFAYA---KEHEPCIIFMDEVDAIGGRRFSE 293 Query: 146 PMGGY---GKTISHVIIGLKTAKGTKQLK----------LDPSIFESLQKERV------- 185 +T+ ++ + Q K LDP++ + +R Sbjct: 294 GTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPN 353 Query: 186 EAGDVIYIEANSGAVKRQGRCDTYATEFDLEAE 218 EAG + + ++ VK+ G EFD EA Sbjct: 354 EAGRLEIFKIHTAKVKKTG-------EFDFEAA 379 >2DHR-A nrPDB Length = 499 Score = 82.1 bits (201), Expect = 5e-16, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 14/147 (9%) Query: 32 AKQAASGLVGQENAREACGVIVELIKSKKMAG-------RAVLLAGPPGTGKTALALAIA 84 K + G E A+E IVE +K+ + VLL GPPG GKT LA A+A Sbjct: 26 PKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVA 85 Query: 85 QELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETE 144 E ++VPF GS+ + + + + V+ E+ + Sbjct: 86 GE--ARVPFITASGSDFVEMFVGVGAARVRDLFET--AKRHAPCIVFIDEIDAVGRKRGS 141 Query: 145 NPMGGYG---KTISHVIIGLKTAKGTK 168 GG +T++ +++ + + Sbjct: 142 GVGGGNDEREQTLNQLLVEMDGFEKDT 168 >6EF3-H nrPDB Length = 467 Score = 81.7 bits (200), Expect = 7e-16, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 17/153 (11%) Query: 32 AKQAASGLVGQENAREACGVIVE--------LIKSKKMAGRAVLLAGPPGTGKTALALAI 83 S + G ++ E +VE + +LL GPPGTGKT A A+ Sbjct: 204 PDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAV 263 Query: 84 AQELGSKVPFCPMVGSEVYSTEIKK-TEVLMENFRRAIGLRIKETKEVYEGEVTELTPCE 142 A + F ++GSE+ + + ++ E F A R K+ ++ E+ + Sbjct: 264 ANR--TDATFIRVIGSELVQKYVGEGARMVRELFEMA---RTKKACIIFFDEIDAVGGAR 318 Query: 143 TENPMGGYG---KTISHVIIGLKTAKGTKQLKL 172 ++ GG +T+ +I L +K+ Sbjct: 319 FDDGAGGDNEVQRTMLELITQLDGFDPRGNIKV 351 >3PFI-A nrPDB Length = 338 Score = 80.9 bits (198), Expect = 1e-15, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 68/170 (40%), Gaps = 21/170 (12%) Query: 274 KLRGEINKVVNKYIDQGVAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNR 333 + G++ ++ + +G +LF+DE+H L L+ A+E I+I + Sbjct: 92 EKSGDLAAILTN-LSEG------DILFIDEIHRLSPAIEEVLYPAMEDYRLDIIIGSGPA 144 Query: 334 GNCV---------IRGTEDITSPHGIPLDLLDRVMI-IRTMLYTPQEMKQIIKIRAQTEG 383 + I T T + L DR + R Y E+ I++ A Sbjct: 145 AQTIKIDLPKFTLIGAT---TRAGMLSNPLRDRFGMQFRLEFYKDSELALILQKAALKLN 201 Query: 384 INISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEI 433 E+A + + +++T R +++LL A +N ++ I ++ E Sbjct: 202 KTCEEKAALEIAK-RSRSTPRIALRLLKRVRDFADVNDEEIITEKRANEA 250 Score = 59.4 bits (142), Expect = 4e-09, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 12/117 (10%) Query: 28 ESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQEL 87 E+ L G +GQE+ ++ V + K + +L +GP G GKT LA I+ E+ Sbjct: 20 ETSLRPSNFDGYIGQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTTLANIISYEM 79 Query: 88 GSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETE 144 + + + I+K+ L AI + E ++ E+ L+P E Sbjct: 80 SANIKTTA-------APMIEKSGDLA-----AILTNLSEGDILFIDEIHRLSPAIEE 124 >6HE9-H nrPDB Length = 390 Score = 80.9 bits (198), Expect = 1e-15, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 88/237 (37%), Gaps = 44/237 (18%) Query: 25 GLDESGLAKQAASGLVGQENAREACGVIVE--------LIKSKKMAGRAVLLAGPPGTGK 76 G + + + + G + E VE + + VLL GPPGTGK Sbjct: 121 GFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGK 180 Query: 77 TALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLM-ENFRRAIGLRIKETKEVYEGEV 135 T LA A+A + + F +VGSE I + L+ E F+ A + K ++ E+ Sbjct: 181 TLLAKAVANQTRAT--FIRVVGSEFVQKYIGEGARLVREVFQLA---KEKAPSIIFIDEL 235 Query: 136 TELTPCETENPMGGY---GKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIY 192 + T + G +T+ ++ L +K+ G Sbjct: 236 DAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKV--------------IGATNR 281 Query: 193 IEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVH------KKKEIIQDVTLHDL 243 I+ A+ R GR FD E +P +G + +K ++ +DV +L Sbjct: 282 IDILDPAILRPGR-------FDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKEL 331 >6HE4-H nrPDB Length = 267 Score = 80.6 bits (197), Expect = 1e-15, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 88/237 (37%), Gaps = 44/237 (18%) Query: 25 GLDESGLAKQAASGLVGQENAREACGVIVE--------LIKSKKMAGRAVLLAGPPGTGK 76 G + + + + G + E VE + + VLL GPPGTGK Sbjct: 7 GFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGK 66 Query: 77 TALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLM-ENFRRAIGLRIKETKEVYEGEV 135 T LA A+A + + F +VGSE I + L+ E F+ A + K ++ E+ Sbjct: 67 TLLAKAVANQTRAT--FIRVVGSEFVQKYIGEGARLVREVFQLA---KEKAPSIIFIDEL 121 Query: 136 TELTPCETENPMGGY---GKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIY 192 + T + G +T+ ++ L +K+ G Sbjct: 122 DAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKV--------------IGATNR 167 Query: 193 IEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVH------KKKEIIQDVTLHDL 243 I+ A+ R GR FD E +P +G + +K ++ +DV +L Sbjct: 168 IDILDPAILRPGR-------FDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKEL 217 >6EF1-K nrPDB Length = 276 Score = 79.4 bits (194), Expect = 3e-15, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 60/159 (37%), Gaps = 17/159 (10%) Query: 26 LDESGLAKQAASGLVGQENAREACGVIVELI--------KSKKMAGRAVLLAGPPGTGKT 77 + E+ + + G + ++ VEL + R VLL GPPGTGKT Sbjct: 9 MGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKT 68 Query: 78 ALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLME-NFRRAIGLRIKETKEVYEGEVT 136 L A+A +K F + GSE + + ++ FR A R ++ EV Sbjct: 69 MLVKAVANS--TKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLA---RENAPSIIFIDEVD 123 Query: 137 ELTPCETENPMGGY---GKTISHVIIGLKTAKGTKQLKL 172 + + G + + ++ + + +K+ Sbjct: 124 SIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKV 162 >5WVI-K nrPDB Length = 428 Score = 79.4 bits (194), Expect = 3e-15, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 60/159 (37%), Gaps = 17/159 (10%) Query: 26 LDESGLAKQAASGLVGQENAREACGVIVELI--------KSKKMAGRAVLLAGPPGTGKT 77 + E+ + + G + ++ VEL + R VLL GPPGTGKT Sbjct: 161 MGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKT 220 Query: 78 ALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLME-NFRRAIGLRIKETKEVYEGEVT 136 L A+A +K F + GSE + + ++ FR A R ++ EV Sbjct: 221 MLVKAVANS--TKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLA---RENAPSIIFIDEVD 275 Query: 137 ELTPCETENPMGGY---GKTISHVIIGLKTAKGTKQLKL 172 + + G + + ++ + + +K+ Sbjct: 276 SIATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKV 314 >4L16-A nrPDB Length = 334 Score = 78.2 bits (191), Expect = 6e-15, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 101/283 (35%), Gaps = 50/283 (17%) Query: 37 SGLVGQENAREACGVIV-------ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGS 89 + + G E A++A IV ++ + + VLL GPPGTGKT + +A + + Sbjct: 56 ADVAGLEGAKKALREIVVLPFKRPDVFTGIRAPPKGVLLFGPPGTGKTMIGRCVASQCKA 115 Query: 90 KVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGG 149 F + S + S + + E L+ R+K ++ E+ L +E+ Sbjct: 116 T--FFNISASSLTSKWVGEGEKLVRALFSV--ARLKLPSVIFIDEIDSLLSSRSESEHES 171 Query: 150 YGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTY 209 + + ++ L + ER+ GA R D Sbjct: 172 SRRIKTEFLVQLDG-------------VNTAPDERLLV---------LGATNRPQELDEA 209 Query: 210 ATEFDLEAEEYVPLPKGDVHKKKEII--------QDVTLHDLDVANARPQG--GQDILSM 259 A + Y+ LP+ + + +I+ D+T H+L+ G G D+ + Sbjct: 210 ARRR-FQKRLYIALPEPE--SRTQIVQNLLVGTRHDITNHNLERIRELTDGYSGADMRQL 266 Query: 260 MGQLMKPKKTEITDKL----RGEINKVVNKYIDQGVAELVPGV 298 + +I D + + +I V + + P V Sbjct: 267 CTEAAMGPIRDIGDDIETIDKDDIRAVTVMDFAEAARVVRPTV 309 >6NYV-B nrPDB Length = 314 Score = 77.9 bits (190), Expect = 8e-15, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 13/152 (8%) Query: 24 LGLDE--SGLAKQAASGLVGQENAREACGVIV-------ELIKSKKMAGRAVLLAGPPGT 74 L LDE G AK + + GQ+ A++A +V EL + + +LL GPPG Sbjct: 24 LILDEIVEGGAKVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGN 83 Query: 75 GKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGE 134 GKT LA A+A E + F + + + S + E L+ R + ++ E Sbjct: 84 GKTLLARAVATECSAT--FLNISAASLTSKYVGDGEKLVRALFAV--ARHMQPSIIFIDE 139 Query: 135 VTELTPCETENPMGGYGKTISHVIIGLKTAKG 166 V L + + + + ++ G Sbjct: 140 VDSLLSERSSSEHEASRRLKTEFLVEFDGLPG 171 >5EQT-A nrPDB Length = 257 Score = 77.9 bits (190), Expect = 1e-14, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 17/150 (11%) Query: 35 AASGLVGQENAREACGVIVEL-IKSKKM-------AGRAVLLAGPPGTGKTALALAIAQE 86 + + G + + +EL +K ++ + VLL GPPG GKT +A A+A E Sbjct: 3 TYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHE 62 Query: 87 LGSKVPFCPMVGSEVYSTEIKKTEVLM-ENFRRAIGLRIKETKEVYEGEVTELTPCETEN 145 + + F +VGSE+ I + L+ E F A + K ++ E+ + + Sbjct: 63 VNAT--FIRVVGSELVRKYIGEGARLVHELFELA---KEKAPTIIFIDEIDAIGAKRMDE 117 Query: 146 PMGGY---GKTISHVIIGLKTAKGTKQLKL 172 GG +T+ ++ + +K+ Sbjct: 118 TTGGEREVNRTLMQLLAEMDGFDPRGNVKV 147 >5E7P-A nrPDB Length = 745 Score = 77.5 bits (189), Expect = 1e-14, Method: Composition-based stats. Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 7/113 (6%) Query: 55 LIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTE-VLM 113 + R VLL GPPG GKT + A+A V + GSE+ + +E + Sbjct: 511 FSRLGIDPPRGVLLYGPPGCGKTFVVRALASSGRLSVH--AVKGSELMDKWVGSSEKAVR 568 Query: 114 ENFRRAIGLRIKETKEVYEGEVTELTPCETEN-PMGGYGKTISHVIIGLKTAK 165 E F RA R V+ E+ L P +N G K ++ ++ L + Sbjct: 569 ELFARA---RDSAPSLVFLDEIDALAPRRGQNFDSGVTDKVVASLLTELDGIE 618 Score = 30.9 bits (68), Expect = 1.2, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 8/92 (8%) Query: 54 ELIKS-KKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVL 112 EL+K+ VL++GP G GK + A+ + G EV + ++ + Sbjct: 253 ELLKTLGATPHLGVLVSGPAGVGKATMVRAVCASRRV----VELDGPEVGALQVDER--- 305 Query: 113 MENFRRAIGLRIKETKEVYEGEVTELTPCETE 144 + + A+ + ++ +V L P E Sbjct: 306 LRSVTSAVAAVTESGGVLFIADVDALLPAGNE 337 >5M32-h nrPDB Length = 355 Score = 77.5 bits (189), Expect = 1e-14, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 15/153 (9%) Query: 31 LAKQAASGLVGQENAREACGVIVEL-IKSKKMAG-------RAVLLAGPPGTGKTALALA 82 + + G + + ++EL +K ++ + VLL GPPGTGKT LA A Sbjct: 106 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 165 Query: 83 IAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCE 142 +A + F + GSE+ I + ++ + R ++ E+ + Sbjct: 166 VAHH--TDCTFIRVSGSELVQKFIGEGARMVR--ELFVMAREHAPSIIFMDEIDSIGSSR 221 Query: 143 TENPMGGYG---KTISHVIIGLKTAKGTKQLKL 172 E GG +T+ ++ L + TK +K+ Sbjct: 222 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKV 254 >6MSK-B nrPDB Length = 440 Score = 77.1 bits (188), Expect = 1e-14, Method: Composition-based stats. Identities = 58/242 (23%), Positives = 89/242 (36%), Gaps = 48/242 (19%) Query: 32 AKQAASGLVGQENAREACGVIVELI--------KSKKMAGRAVLLAGPPGTGKTALALAI 83 ++ + + G +N + VEL + + V+L GPPGTGKT LA A+ Sbjct: 180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 239 Query: 84 AQELGSKVPFCPMVGSEVYSTEIKKTEVLM-ENFRRAIGLRIKETKEVYEGEVTELTPCE 142 A + + F +VGSE+ + L+ E FR A V+ E+ + Sbjct: 240 ANQTSAT--FLRVVGSELIQKYLGDGPKLVRELFRVA---EEHAPSIVFIDEIDAIGTKR 294 Query: 143 TENPMGGY---GKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGA 199 ++ GG +T+ ++ L D + + + IE A Sbjct: 295 YDSNSGGEREIQRTMLELLNQLDGFDSRG----DVKVIMATNR----------IETLDPA 340 Query: 200 VKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQ--------DVTLHDLDVANARPQ 251 + R GR D EF PLP K+ I DVTL DL +A Sbjct: 341 LIRPGRID-RKIEF--------PLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLS 391 Query: 252 GG 253 G Sbjct: 392 GA 393 >5GJQ-J nrPDB Length = 406 Score = 77.1 bits (188), Expect = 1e-14, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 15/153 (9%) Query: 31 LAKQAASGLVGQENAREACGVIVEL-IKSKKMAG-------RAVLLAGPPGTGKTALALA 82 + + G + + ++EL +K ++ + VLL GPPGTGKT LA A Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202 Query: 83 IAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCE 142 +A + F + GSE+ I + ++ + R ++ E+ + Sbjct: 203 VAHH--TDCTFIRVSGSELVQKFIGEGARMVR--ELFVMAREHAPSIIFMDEIDSIGSSR 258 Query: 143 TENPMGGYG---KTISHVIIGLKTAKGTKQLKL 172 E GG +T+ ++ L + TK +K+ Sbjct: 259 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKV 291 >5VHF-B nrPDB Length = 340 Score = 77.1 bits (188), Expect = 2e-14, Method: Composition-based stats. Identities = 58/242 (23%), Positives = 89/242 (36%), Gaps = 48/242 (19%) Query: 32 AKQAASGLVGQENAREACGVIVELI--------KSKKMAGRAVLLAGPPGTGKTALALAI 83 ++ + + G +N + VEL + + V+L GPPGTGKT LA A+ Sbjct: 88 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 147 Query: 84 AQELGSKVPFCPMVGSEVYSTEIKKTEVLM-ENFRRAIGLRIKETKEVYEGEVTELTPCE 142 A + + F +VGSE+ + L+ E FR A V+ E+ + Sbjct: 148 ANQTSAT--FLRVVGSELIQKYLGDGPKLVRELFRVA---EEHAPSIVFIDEIDAIGTKR 202 Query: 143 TENPMGGY---GKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGA 199 ++ GG +T+ ++ L D + + + IE A Sbjct: 203 YDSNSGGEREIQRTMLELLNQLDGFDSRG----DVKVIMATNR----------IETLDPA 248 Query: 200 VKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQ--------DVTLHDLDVANARPQ 251 + R GR D EF PLP K+ I DVTL DL +A Sbjct: 249 LIRPGRID-RKIEF--------PLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLS 299 Query: 252 GG 253 G Sbjct: 300 GA 301 >5VFP-B nrPDB Length = 389 Score = 76.7 bits (187), Expect = 2e-14, Method: Composition-based stats. Identities = 58/242 (23%), Positives = 89/242 (36%), Gaps = 48/242 (19%) Query: 32 AKQAASGLVGQENAREACGVIVELI--------KSKKMAGRAVLLAGPPGTGKTALALAI 83 ++ + + G +N + VEL + + V+L GPPGTGKT LA A+ Sbjct: 129 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 188 Query: 84 AQELGSKVPFCPMVGSEVYSTEIKKTEVLM-ENFRRAIGLRIKETKEVYEGEVTELTPCE 142 A + + F +VGSE+ + L+ E FR A V+ E+ + Sbjct: 189 ANQTSAT--FLRVVGSELIQKYLGDGPKLVRELFRVA---EEHAPSIVFIDEIDAIGTKR 243 Query: 143 TENPMGGY---GKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGA 199 ++ GG +T+ ++ L D + + + IE A Sbjct: 244 YDSNSGGEREIQRTMLELLNQLDGFDSRG----DVKVIMATNR----------IETLDPA 289 Query: 200 VKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQ--------DVTLHDLDVANARPQ 251 + R GR D EF PLP K+ I DVTL DL +A Sbjct: 290 LIRPGRID-RKIEF--------PLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLS 340 Query: 252 GG 253 G Sbjct: 341 GA 342 >5VHP-C nrPDB Length = 266 Score = 76.3 bits (186), Expect = 3e-14, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 15/153 (9%) Query: 31 LAKQAASGLVGQENAREACGVIVEL-IKSKKMAG-------RAVLLAGPPGTGKTALALA 82 + + G + + ++EL +K ++ + VLL GPPGTGKT LA A Sbjct: 14 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 73 Query: 83 IAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCE 142 +A + F + GSE+ I + ++ + R ++ E+ + Sbjct: 74 VAHH--TDCTFIRVSGSELVQKFIGEGARMVR--ELFVMAREHAPSIIFMDEIDSIGSSR 129 Query: 143 TENPMGGYG---KTISHVIIGLKTAKGTKQLKL 172 E GG +T+ ++ L + TK +K+ Sbjct: 130 LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKV 162 >5VHO-B nrPDB Length = 267 Score = 75.9 bits (185), Expect = 3e-14, Method: Composition-based stats. Identities = 58/242 (23%), Positives = 89/242 (36%), Gaps = 48/242 (19%) Query: 32 AKQAASGLVGQENAREACGVIVELI--------KSKKMAGRAVLLAGPPGTGKTALALAI 83 ++ + + G +N + VEL + + V+L GPPGTGKT LA A+ Sbjct: 14 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 73 Query: 84 AQELGSKVPFCPMVGSEVYSTEIKKTEVLM-ENFRRAIGLRIKETKEVYEGEVTELTPCE 142 A + + F +VGSE+ + L+ E FR A V+ E+ + Sbjct: 74 ANQTSAT--FLRVVGSELIQKYLGDGPKLVRELFRVA---EEHAPSIVFIDEIDAIGTKR 128 Query: 143 TENPMGGY---GKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGA 199 ++ GG +T+ ++ L D + + + IE A Sbjct: 129 YDSNSGGEREIQRTMLELLNQLDGFDSRG----DVKVIMATNR----------IETLDPA 174 Query: 200 VKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQ--------DVTLHDLDVANARPQ 251 + R GR D EF PLP K+ I DVTL DL +A Sbjct: 175 LIRPGRID-RKIEF--------PLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLS 225 Query: 252 GG 253 G Sbjct: 226 GA 227 >5VHN-D nrPDB Length = 262 Score = 75.9 bits (185), Expect = 4e-14, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 15/145 (10%) Query: 26 LDESGLAKQAASGLVGQENAREACGVIVELIKSKKM--------AGRAVLLAGPPGTGKT 77 L + + G + ++ VEL + R VL+ GPPG GKT Sbjct: 10 LTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKT 69 Query: 78 ALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLME-NFRRAIGLRIKETKEVYEGEVT 136 LA A+A + F +VGSE + + ++ FR A + ++ E+ Sbjct: 70 MLAKAVAHHTTAA--FIRVVGSEFVQKYLGEGPRMVRDVFRLA---KENAPAIIFIDEID 124 Query: 137 ELTPCETENPMGGYGKTISHVIIGL 161 + + G + + +++ L Sbjct: 125 AIATKRFDAQTGAD-REVQRILLEL 148 >4Z8X-A nrPDB Length = 497 Score = 75.5 bits (184), Expect = 4e-14, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 61/158 (38%), Gaps = 17/158 (10%) Query: 19 SHVKGLGLDESGLAKQAASGLVGQENAREA-------CGVIVELIKSKKMAGRAVLLAGP 71 SH+ + ++E K + G E +E V+ K + VLL G Sbjct: 2 SHMAKVYIEEK--PKVTFKDVAGIEEVKEEVKEIIEYLKDPVKFQKLGGRPPKGVLLYGE 59 Query: 72 PGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVY 131 PG GKT LA AIA E + VPF + GS+ + + + + ++ Sbjct: 60 PGVGKTLLAKAIAGE--AHVPFISVSGSDFVEMFVGVGAARVRDLFET--AKKHAPCMIF 115 Query: 132 EGEVTELTPCETENPMGG----YGKTISHVIIGLKTAK 165 E+ + P+GG +T++ +++ + Sbjct: 116 IDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFD 153 >5T0C-AD nrPDB Length = 418 Score = 74.8 bits (182), Expect = 8e-14, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 15/145 (10%) Query: 26 LDESGLAKQAASGLVGQENAREACGVIVELIKSKKM--------AGRAVLLAGPPGTGKT 77 L + + G + ++ VEL + R VL+ GPPG GKT Sbjct: 154 LTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKT 213 Query: 78 ALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLME-NFRRAIGLRIKETKEVYEGEVT 136 LA A+A + F +VGSE + + ++ FR A + ++ E+ Sbjct: 214 MLAKAVAHHTTAA--FIRVVGSEFVQKYLGEGPRMVRDVFRLA---KENAPAIIFIDEID 268 Query: 137 ELTPCETENPMGGYGKTISHVIIGL 161 + + G + + +++ L Sbjct: 269 AIATKRFDAQTGAD-REVQRILLEL 292 >5VHP-E nrPDB Length = 262 Score = 74.4 bits (181), Expect = 1e-13, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 17/150 (11%) Query: 35 AASGLVGQENAREACGVIVE--------LIKSKKMAGRAVLLAGPPGTGKTALALAIAQE 86 + S + G ++E + + + LL GPPGTGKT LA A+A + Sbjct: 4 SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQ 63 Query: 87 LGSKVPFCPMVGSEVYSTEIKKTEVL-MENFRRAIGLRIKETKEVYEGEVTELTPCETEN 145 L F +V S + I ++ L E F A R + ++ E+ + Sbjct: 64 L--DCNFLKVVSSSIVDKYIGESARLIREMFNYA---RDHQPCIIFMDEIDAIGGRRFSE 118 Query: 146 PMGGY---GKTISHVIIGLKTAKGTKQLKL 172 +T+ ++ + ++K+ Sbjct: 119 GTSADREIQRTLMELLNQMDGFDTLHRVKM 148 >5VFP-F nrPDB Length = 396 Score = 73.2 bits (178), Expect = 2e-13, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 19 SHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM--------AGRAVLLAG 70 S VK + +DE + S + G + + + L + K + VL+ G Sbjct: 127 SRVKAMEVDER--PTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYG 184 Query: 71 PPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGL-RIKETKE 129 PPGTGKT LA A A + +K F + G ++ I L+ R A L + K Sbjct: 185 PPGTGKTLLARACAAQ--TKATFLKLAGPQLVQMFIGDGAKLV---RDAFALAKEKAPSI 239 Query: 130 VYEGEVTELTPCETENPMGGY---GKTISHVIIGLKTAKGTKQLKL 172 ++ E+ + ++ G +T+ ++ L + Q+K+ Sbjct: 240 IFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKV 285 >5VHO-F nrPDB Length = 267 Score = 73.2 bits (178), Expect = 2e-13, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 19 SHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM--------AGRAVLLAG 70 S VK + +DE + S + G + + + L + K + VL+ G Sbjct: 5 SRVKAMEVDER--PTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYG 62 Query: 71 PPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGL-RIKETKE 129 PPGTGKT LA A A + +K F + G ++ I L+ R A L + K Sbjct: 63 PPGTGKTLLARACAAQ--TKATFLKLAGPQLVQMFIGDGAKLV---RDAFALAKEKAPSI 117 Query: 130 VYEGEVTELTPCETENPMGGY---GKTISHVIIGLKTAKGTKQLKL 172 ++ E+ + ++ G +T+ ++ L + Q+K+ Sbjct: 118 IFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKV 163 >3JCP-I nrPDB Length = 437 Score = 72.8 bits (177), Expect = 3e-13, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 19/173 (10%) Query: 32 AKQAASGLVGQENAREACGVIVELI--------KSKKMAGRAVLLAGPPGTGKTALALAI 83 ++ S + G E+ + VEL + + V+L G PGTGKT LA A+ Sbjct: 177 PTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAV 236 Query: 84 AQELGSKVPFCPMVGSEVYSTEIKKTEVL-MENFRRAIGLRIKETKEVYEGEVTELTPCE 142 A + + F +VGSE+ + L + F+ A V+ E+ + Sbjct: 237 ANQTSAT--FLRIVGSELIQKYLGDGPRLCRQIFKVA---GENAPSIVFIDEIDAIGTKR 291 Query: 143 TENPMGGY---GKTISHVIIGLKTAK--GTKQLKLDPSIFESLQKERVEAGDV 190 ++ GG +T+ ++ L G ++ + + E+L + G + Sbjct: 292 YDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRI 344 >6FVU-I nrPDB Length = 384 Score = 72.8 bits (177), Expect = 3e-13, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 19/173 (10%) Query: 32 AKQAASGLVGQENAREACGVIVELI--------KSKKMAGRAVLLAGPPGTGKTALALAI 83 ++ S + G E+ + VEL + + V+L G PGTGKT LA A+ Sbjct: 124 PTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAV 183 Query: 84 AQELGSKVPFCPMVGSEVYSTEIKKTEVL-MENFRRAIGLRIKETKEVYEGEVTELTPCE 142 A + + F +VGSE+ + L + F+ A V+ E+ + Sbjct: 184 ANQTSAT--FLRIVGSELIQKYLGDGPRLCRQIFKVA---GENAPSIVFIDEIDAIGTKR 238 Query: 143 TENPMGGY---GKTISHVIIGLKTAK--GTKQLKLDPSIFESLQKERVEAGDV 190 ++ GG +T+ ++ L G ++ + + E+L + G + Sbjct: 239 YDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRI 291 >6MSD-E nrPDB Length = 403 Score = 72.8 bits (177), Expect = 3e-13, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 17/150 (11%) Query: 35 AASGLVGQENAREACGVIVE--------LIKSKKMAGRAVLLAGPPGTGKTALALAIAQE 86 + S + G ++E + + + LL GPPGTGKT LA A+A + Sbjct: 145 SYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQ 204 Query: 87 LGSKVPFCPMVGSEVYSTEIKKTEVL-MENFRRAIGLRIKETKEVYEGEVTELTPCETEN 145 L F +V S + I ++ L E F A R + ++ E+ + Sbjct: 205 L--DCNFLKVVSSSIVDKYIGESARLIREMFNYA---RDHQPCIIFMDEIDAIGGRRFSE 259 Query: 146 PMGGY---GKTISHVIIGLKTAKGTKQLKL 172 +T+ ++ + ++K+ Sbjct: 260 GTSADREIQRTLMELLNQMDGFDTLHRVKM 289 >6EPD-M nrPDB Length = 442 Score = 72.5 bits (176), Expect = 4e-13, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 19/166 (11%) Query: 19 SHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM--------AGRAVLLAG 70 S VK + +DE + S + G + + + L + K + VL+ G Sbjct: 173 SRVKAMEVDER--PTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYG 230 Query: 71 PPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGL-RIKETKE 129 PPGTGKT LA A A + +K F + G ++ I L+ R A L + K Sbjct: 231 PPGTGKTLLARACAAQ--TKATFLKLAGPQLVQMFIGDGAKLV---RDAFALAKEKAPSI 285 Query: 130 VYEGEVTELTPCETENPMGGY---GKTISHVIIGLKTAKGTKQLKL 172 ++ E+ + ++ G +T+ ++ L + Q+K+ Sbjct: 286 IFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKV 331 >3JCO-J nrPDB Length = 405 Score = 71.7 bits (174), Expect = 6e-13, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 65/154 (42%), Gaps = 17/154 (11%) Query: 31 LAKQAASGLVGQENAREACGVIVEL-IKSKKMAG-------RAVLLAGPPGTGKTALALA 82 + + G + ++EL +K ++ + V+L GPPGTGKT LA A Sbjct: 142 VPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARA 201 Query: 83 IAQELGSKVPFCPMVGSEVYSTEIKK-TEVLMENFRRAIGLRIKETKEVYEGEVTELTPC 141 +A + F + G+E+ I + + ++ E F A R ++ E+ + Sbjct: 202 VAHH--TDCKFIRVSGAELVQKYIGEGSRMVRELFVMA---REHAPSIIFMDEIDSIGST 256 Query: 142 ETENPMGGYG---KTISHVIIGLKTAKGTKQLKL 172 E GG +T+ ++ L + +K +K+ Sbjct: 257 RVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKI 290 >6EF1-I nrPDB Length = 271 Score = 71.3 bits (173), Expect = 8e-13, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 19/173 (10%) Query: 32 AKQAASGLVGQENAREACGVIVELI--------KSKKMAGRAVLLAGPPGTGKTALALAI 83 ++ S + G E+ + VEL + + V+L G PGTGKT LA A+ Sbjct: 11 PTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAV 70 Query: 84 AQELGSKVPFCPMVGSEVYSTEIKKTEVL-MENFRRAIGLRIKETKEVYEGEVTELTPCE 142 A + + F +VGSE+ + L + F+ A V+ E+ + Sbjct: 71 ANQTSAT--FLRIVGSELIQKYLGDGPRLCRQIFKVA---GENAPSIVFIDEIDAIGTKR 125 Query: 143 TENPMGGY---GKTISHVIIGLKTAK--GTKQLKLDPSIFESLQKERVEAGDV 190 ++ GG +T+ ++ L G ++ + + E+L + G + Sbjct: 126 YDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRI 178 >5A5B-M nrPDB Length = 434 Score = 70.9 bits (172), Expect = 1e-12, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 59/157 (37%), Gaps = 16/157 (10%) Query: 19 SHVKGLGLDESGLAKQAASGLVGQENAREACGVIV--------ELIKSKKMAGRAVLLAG 70 S VK + +DE + S + G + E + + A + L+ G Sbjct: 165 SRVKAMEVDEK--PTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYG 222 Query: 71 PPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGL-RIKETKE 129 PPGTGKT LA A A + + F + ++ I + L+ R A L + K Sbjct: 223 PPGTGKTLLARACAAQTNAT--FLKLAAPQLVQMYIGEGAKLV---RDAFALAKEKAPTI 277 Query: 130 VYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKG 166 ++ E+ + ++ G + ++ L G Sbjct: 278 IFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDG 314 >6EF2-J nrPDB Length = 262 Score = 70.9 bits (172), Expect = 1e-12, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 9/113 (7%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKK-TEVLMENFRRAIGL 122 + V+L GPPGTGKT LA A+A + F + G+E+ I + + ++ E F A Sbjct: 40 KGVILYGPPGTGKTLLARAVAHH--TDCKFIRVSGAELVQKYIGEGSRMVRELFVMA--- 94 Query: 123 RIKETKEVYEGEVTELTPCETENPMGGYG---KTISHVIIGLKTAKGTKQLKL 172 R ++ E+ + E GG +T+ ++ L + +K +K+ Sbjct: 95 REHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKI 147 >6EF0-M nrPDB Length = 258 Score = 68.2 bits (165), Expect = 6e-12, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 52/144 (36%), Gaps = 14/144 (9%) Query: 32 AKQAASGLVGQENAREACGVIV--------ELIKSKKMAGRAVLLAGPPGTGKTALALAI 83 + S + G + E + + A + L+ GPPGTGKT LA A Sbjct: 1 PTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARAC 60 Query: 84 AQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGL-RIKETKEVYEGEVTELTPCE 142 A + + F + ++ I + L+ R A L + K ++ E+ + Sbjct: 61 AAQTNAT--FLKLAAPQLVQMYIGEGAKLV---RDAFALAKEKAPTIIFIDELDAIGTKR 115 Query: 143 TENPMGGYGKTISHVIIGLKTAKG 166 ++ G + ++ L G Sbjct: 116 FDSEKSGDREVQRTMLELLNQLDG 139 >6B5D-A nrPDB Length = 309 Score = 68.2 bits (165), Expect = 7e-12, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 56/137 (40%), Gaps = 14/137 (10%) Query: 38 GLVGQENAREACGVIV-------ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSK 90 ++G + ++ V E + + +A++LAGPPGTGKT +A AIA E S Sbjct: 31 DIIGMHDVKQVLHEAVTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASESSST 90 Query: 91 VPFCPMVGSEVYSTEIKKTEVLME-NFRRAIGLRIKETKEVYEGEVTELTPCETEN-PMG 148 + +++ S +E ++ F A R ++ E+ L + Sbjct: 91 F--FTVSSTDLSSKWRGDSEKIVRLLFELA---RFYAPSIIFIDEIDTLGGQRGNSGEHE 145 Query: 149 GYGKTISHVIIGLKTAK 165 + S ++ + ++ Sbjct: 146 ASRRVKSEFLVQMDGSQ 162 >6MDP-A nrPDB Length = 768 Score = 67.8 bits (164), Expect = 1e-11, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 59/156 (37%), Gaps = 24/156 (15%) Query: 21 VKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALA 80 + GL + S + ++A + V E G + +LL GPPG GKT LA Sbjct: 244 IGGLDKEFSDIFRRAFASRVFPPEIVEQMGC---------KHVKGILLYGPPGCGKTLLA 294 Query: 81 LAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETK---------EVY 131 I + L ++ P + G E+ + + ++E N R+ +E + + Sbjct: 295 RQIGKMLNAREP-KVVNGPEILNKYVGESEA---NIRKLFADAEEEQRRLGANSGLHIII 350 Query: 132 EGEVTELTPCETE--NPMGGYGKTISHVIIGLKTAK 165 E+ + G + ++ ++ + + Sbjct: 351 FDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVE 386 Score = 41.6 bits (96), Expect = 7e-04, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 5/79 (6%) Query: 50 GVIVELIKSK-KMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSE--VYSTEI 106 ++V+ K+ + +VLL GPP +GKTALA IA+E S PF + + + +E Sbjct: 546 ELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEE--SNFPFIKICSPDKMIGFSET 603 Query: 107 KKTEVLMENFRRAIGLRIK 125 K + + + F A ++ Sbjct: 604 AKCQAMKKIFDDAYKSQLS 622 >5WC0-A nrPDB Length = 472 Score = 67.5 bits (163), Expect = 1e-11, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 56/137 (40%), Gaps = 14/137 (10%) Query: 38 GLVGQENAREACGVIV-------ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSK 90 ++G + ++ V E + + +A++LAGPPGTGKT +A AIA E S Sbjct: 194 DIIGMHDVKQVLHEAVTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASESSST 253 Query: 91 VPFCPMVGSEVYSTEIKKTEVLME-NFRRAIGLRIKETKEVYEGEVTELTPCETEN-PMG 148 + +++ S +E ++ F A R ++ ++ L + Sbjct: 254 FF--TVSSTDLSSKWRGDSEKIVRLLFELA---RFYAPSIIFIDQIDTLGGQRGNSGEHE 308 Query: 149 GYGKTISHVIIGLKTAK 165 + S ++ + ++ Sbjct: 309 ASRRVKSEFLVQMDGSQ 325 >5KWA-A nrPDB Length = 497 Score = 66.3 bits (160), Expect = 3e-11, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 32/164 (19%) Query: 31 LAKQAASGLVGQENAREACGVIVELIKSKKM--------AGRAVLLAGPPGTGKTALALA 82 + + + + G E VEL K + VLL GPPG GKT +A A Sbjct: 141 VPDVSYADIGGLSRQIEQIRDAVELPFLHKELYREYSLRPPKGVLLYGPPGCGKTLIAKA 200 Query: 83 IAQELGSKVP-------------FCPMVGSEVYSTEIKKTEV-LMENFRRA-IGLRIKET 127 +A L K+ F + G E+ + + +TE + F+RA Sbjct: 201 VANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTP 260 Query: 128 KEVYEGEVTEL-----TPCETENPMGGYGKTISHVIIGLKTAKG 166 V+ E+ + T ++ + ++ + +G Sbjct: 261 VIVFFDEMDSIFRTRGTGVSSDVETT----VVPQLLSEIDGVEG 300 >5W0T-A nrPDB Length = 304 Score = 66.3 bits (160), Expect = 3e-11, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 6/82 (7%) Query: 65 AVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLME-NFRRAIGLR 123 VLL GPPG GKT LA A+A+E G+ F + S + ++ +++ F A L Sbjct: 79 GVLLYGPPGCGKTMLAKALAKESGAN--FISIRMSSIMDKWYGESNKIVDAMFSLANKL- 135 Query: 124 IKETKEVYEGEVTELTPCETEN 145 + ++ E+ + Sbjct: 136 --QPCIIFIDEIDSFLRERSST 155 >5VQ9-D nrPDB Length = 432 Score = 55.1 bits (131), Expect = 6e-08, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 20/147 (13%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVP-------FCPMVGSEVYSTEIKKTEVL-MEN 115 R VLL GPPGTGKT+L A+AQ+L ++ + ++S ++ L + Sbjct: 173 RVVLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKM 232 Query: 116 FRRAIGLRIKETKEVY--EGEVTELT----PCETENPMGGYGKTISHVIIGLKTAKGTKQ 169 F++ L + V+ +V LT C + ++ V+ + Q Sbjct: 233 FQKIQDLIDDKDALVFVLIDQVESLTAARNACRAGTEPSDAIRVVNAVLTQID------Q 286 Query: 170 LKLDPSIFESLQKERVEAGDVIYIEAN 196 +K ++ E DV +++ Sbjct: 287 IKRHSNVVILTTSNITEKIDVAFVDRA 313 >4XGU-A nrPDB Length = 424 Score = 54.0 bits (128), Expect = 1e-07, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 62/158 (39%), Gaps = 19/158 (12%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVP-------FCPMVGSEVYSTEIKKTEVLME-N 115 R +LL GPPGTGKT+L +AQ L ++ + ++S ++ L++ Sbjct: 173 RLILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQKM 232 Query: 116 FRRAIGLRIKETKEVY--EGEVTELTPCETENPMGG----YGKTISHVIIGLKTAKGT-K 168 F + L E V+ EV L C + + ++ ++ + + Sbjct: 233 FDQIDELAEDEKCMVFVLIDEVESLGMCRESSSSRSEPSDAIRAVNALLTQIDRIRRRDN 292 Query: 169 QLKLDPSIFES-LQKERVEAGDVIYIEANSGAVKRQGR 205 L L S ES L K V+ D++ N G R Sbjct: 293 VLILCTSNLESTLDKALVDRADIV---KNVGQPSDFAR 327 >1IQP-A nrPDB Length = 327 Score = 53.2 bits (126), Expect = 2e-07, Method: Composition-based stats. Identities = 60/270 (22%), Positives = 100/270 (37%), Gaps = 55/270 (20%) Query: 33 KQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQEL---GS 89 Q +VGQE+ + +K+ M +L AGPPG GKT ALA+A+EL Sbjct: 21 PQRLDDIVGQEHIVKRLK---HYVKTGSMP--HLLFAGPPGVGKTTAALALARELFGENW 75 Query: 90 KVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGG 149 + F + S+ + + + ++ F R + K ++ E LT Sbjct: 76 RHNFLELNASDERGINVIREK--VKEFARTKPIGGASFKIIFLDEADALTQD-------- 125 Query: 150 YGKTISHVIIGLKTAKGTKQL--KLDPSIFESLQ-----------KERVEAGDVIYIEAN 196 + + + ++ L I E +Q ++ A + YI N Sbjct: 126 -AQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIAEN 184 Query: 197 SGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVAN--------- 247 G TE L+A Y+ +GD+ + I+Q D + + Sbjct: 185 EG---------LELTEEGLQAILYIA--EGDMRRAINILQAAAALDKKITDENVFMVASR 233 Query: 248 ARPQGGQDILSMMGQLMKPKKTEITDKLRG 277 ARP+ DI MM +K + +KLR Sbjct: 234 ARPE---DIREMMLLALKGNFLKAREKLRE 260 Score = 44.0 bits (102), Expect = 1e-04, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 74/192 (38%), Gaps = 26/192 (13%) Query: 259 MMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAELVPG----VLFVDEVHMLDIECFTY 314 + G+ + E+ IN + K + + + G ++F+DE L + Sbjct: 70 LFGENWRHNFLELNASDERGINVIREKVKEFARTKPIGGASFKIIFLDEADALTQDAQQA 129 Query: 315 LHRALESSIAPI-VIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQ 373 L R +E + + I + N + +I + R I R +++ + Sbjct: 130 LRRTMEMFSSNVRFILSCNYSSKIIE-------------PIQSRCAIFRFRPLRDEDIAK 176 Query: 374 IIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSI-------E 426 ++ A+ EG+ ++EE L + I + +R ++ +L A L K +++ Sbjct: 177 RLRYIAENEGLELTEEGLQAILYI-AEGDMRRAINILQAAAALDKKITDENVFMVASRAR 235 Query: 427 KEHVEEISELFY 438 E + E+ L Sbjct: 236 PEDIREMMLLAL 247 >2CHG-A nrPDB Length = 226 Score = 51.3 bits (121), Expect = 9e-07, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 10/112 (8%) Query: 33 KQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQEL---GS 89 + +VGQ+ + VE + +L +GPPGTGKTA A+A+A++L Sbjct: 13 PRTLDEVVGQDEVIQRLKGYVE-----RKNIPHLLFSGPPGTGKTATAIALARDLFGENW 67 Query: 90 KVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPC 141 + F M S+ ++ + + ++ F R + K ++ E LT Sbjct: 68 RDNFIEMNASDERGIDVVRHK--IKEFARTAPIGGAPFKIIFLDEADALTAD 117 Score = 35.1 bits (79), Expect = 0.072, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 13/128 (10%) Query: 298 VLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDR 357 ++F+DE L + L R +E +C + + S I + R Sbjct: 105 IIFLDEADALTADAQAALRRTMEMY----------SKSCRFILSCNYVSR--IIEPIQSR 152 Query: 358 VMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLA 417 + R + MK+ + + EG+ I+E+ L L I + R ++ L A + Sbjct: 153 CAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYI-SGGDFRKAINALQGAAAIG 211 Query: 418 KINGKDSI 425 ++ D+I Sbjct: 212 EVVDADTI 219 >2CHV-A nrPDB Length = 319 Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 10/112 (8%) Query: 33 KQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQEL---GS 89 + +VGQ+ + VE + +L +GPPGTGKTA A+A+A++L Sbjct: 13 PRTLDEVVGQDEVIQRLKGYVE-----RKNIPHLLFSGPPGTGKTATAIALARDLFGENW 67 Query: 90 KVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPC 141 + F M S+ ++ + + ++ F R + K ++ E LT Sbjct: 68 RDNFIEMNASDERGIDVVRHK--IKEFARTAPIGGAPFKIIFLDEADALTAD 117 Score = 34.3 bits (77), Expect = 0.12, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 13/128 (10%) Query: 298 VLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDR 357 ++F+DE L + L R +E +C + + S I + R Sbjct: 105 IIFLDEADALTADAQAALRRTMEMY----------SKSCRFILSCNYVSR--IIEPIQSR 152 Query: 358 VMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLA 417 + R + MK+ + + EG+ I+E+ L L I + R ++ L A + Sbjct: 153 CAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYI-SGGDFRKAINALQGAAAIG 211 Query: 418 KINGKDSI 425 ++ D+I Sbjct: 212 EVVDADTI 219 >1SXJ-A nrPDB Length = 516 Score = 46.3 bits (108), Expect = 3e-05, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 4/106 (3%) Query: 54 ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEI--KKTEV 111 K RA +L GPPG GKT A +AQELG + S+V S + + Sbjct: 68 HAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDI--LEQNASDVRSKTLLNAGVKN 125 Query: 112 LMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHV 157 ++N + E + G+ + E + GG + + Sbjct: 126 ALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQL 171 >1NJG-A nrPDB Length = 250 Score = 45.9 bits (107), Expect = 3e-05, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 13/112 (11%) Query: 298 VLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDR 357 V +DEVHML F L + LE + T D P +P+ +L R Sbjct: 129 VYLIDEVHMLSRHSFNALLKTLEEP---------PEHVKFLLATTD---PQKLPVTILSR 176 Query: 358 VMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQL 409 + ++++ ++ E I AL L + +LR ++ L Sbjct: 177 CLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLAR-AAEGSLRDALSL 227 >4I5O-A nrPDB Length = 363 Score = 45.5 bits (106), Expect = 5e-05, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 57/123 (46%), Gaps = 17/123 (13%) Query: 39 LVGQENAREACGVIV----------ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELG 88 ++GQE A++ V V + ++ +LL GP G+GKT LA +A+ L Sbjct: 17 VIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLL- 75 Query: 89 SKVPFCPMVGSEVYST-EIKK-TEVLMENFRRAIGLRIKETK--EVYEGEVTELTPCETE 144 VPF + + + + E +++ + +++ + VY E+ +++ +++ Sbjct: 76 -DVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKIS-RKSD 133 Query: 145 NPM 147 NP Sbjct: 134 NPS 136 >3GLF-B nrPDB Length = 395 Score = 45.5 bits (106), Expect = 5e-05, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 13/112 (11%) Query: 298 VLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDR 357 V +DEVHML F L + LE + T D P +P+ +L R Sbjct: 144 VYLIDEVHMLSRHSFNALLKTLEEP---------PEHVKFLLATTD---PQKLPVTILSR 191 Query: 358 VMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQL 409 + ++++ ++ E I AL L + +LR ++ L Sbjct: 192 CLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLAR-AAEGSLRDALSL 242 >3PVS-A nrPDB Length = 447 Score = 43.2 bits (100), Expect = 2e-04, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 11/113 (9%) Query: 33 KQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVP 92 + + +GQ++ A + I++ + +++L GPPGTGKT LA IA+ + V Sbjct: 22 PENLAQYIGQQHLLAAGKPLPRAIEAGHL--HSMILWGPPGTGKTTLAEVIARYANADV- 78 Query: 93 FCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIK-ETKEVYEGEVTELTPCETE 144 E S + + E RA R ++ EV + + Sbjct: 79 -------ERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQD 124 >3M6A-A nrPDB Length = 543 Score = 42.8 bits (99), Expect = 3e-04, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%) Query: 41 GQENAREACGVIVELIK-SKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVG 98 G E +E + + K +K + G + LAGPPG GKT+LA +IA+ LG K + G Sbjct: 85 GLEKVKERILEYLAVQKLTKSLKGPILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLGG 143 >1D2N-A nrPDB Length = 272 Score = 42.0 bits (97), Expect = 6e-04, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 5/79 (6%) Query: 50 GVIVELIKSK-KMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSE--VYSTEI 106 ++V+ K+ + +VLL GPP +GKTALA IA+E S PF + + + +E Sbjct: 50 ELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEE--SNFPFIKICSPDKMIGFSET 107 Query: 107 KKTEVLMENFRRAIGLRIK 125 K + + + F A ++ Sbjct: 108 AKCQAMKKIFDDAYKSQLS 126 >4ZPX-A nrPDB Length = 413 Score = 40.1 bits (92), Expect = 0.002, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%) Query: 27 DESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQE 86 +E + ++ ++GQE+A VE+IK+ R VLL G PGTGK+ L A+A+ Sbjct: 31 EEIEVPEKLIDQVIGQEHA-------VEVIKTAANQKRHVLLIGEPGTGKSMLGQAMAEL 83 Query: 87 LGSKV 91 L ++ Sbjct: 84 LPTET 88 Score = 35.9 bits (81), Expect = 0.037, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 65/172 (37%), Gaps = 32/172 (18%) Query: 297 GVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIR-----------GTEDIT 345 GVLF+DE+ L ++ L A++ PI + ++R ++ Sbjct: 240 GVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSEMSSGAMVRTEPVPCDFVLVAAGNLD 299 Query: 346 SPHGIPLDLLDR-------VMIIRTMLYTPQEMKQIIKIRAQTEGIN-----ISEEALNH 393 + + L R V + TM T + +++++ AQ + ++EA+ Sbjct: 300 TVDKMHPALRSRIRGYGYEVYMRTTMPDTIENRRKLVQFVAQEVKRDGKIPHFTKEAVEE 359 Query: 394 LGEIGTKTT---------LRYSVQLLTPANLLAKINGKDSIEKEHVEEISEL 436 + K LR ++ A +A GK +E+E V E ++ Sbjct: 360 IVREAQKRAGRKGHLTLRLRDLGGIVRAAGDIAVKKGKKYVEREDVIEAVKM 411 >1OFI-A nrPDB Length = 310 Score = 40.1 bits (92), Expect = 0.002, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 51/116 (43%), Gaps = 18/116 (15%) Query: 39 LVGQENAREACGVIV----------ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELG 88 ++GQ +A+ A + + E ++ + + +L+ GP G GKT +A +A+ Sbjct: 17 IIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTP-KNILMIGPTGVGKTEIARRLAK--L 73 Query: 89 SKVPFCPMVGSEVYSTEI--KKTEVLMENFRRAIGLRIKETK---EVYEGEVTELT 139 + PF + ++ K+ + ++ + + G I + V+ E+ ++ Sbjct: 74 ANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKIC 129 >3K1J-A nrPDB Length = 604 Score = 38.9 bits (89), Expect = 0.004, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%) Query: 27 DESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQE 86 +E + ++ ++GQE+A VE+IK+ R VLL G PGTGK+ L A+A+ Sbjct: 31 EEIEVPEKLIDQVIGQEHA-------VEVIKTAANQKRHVLLIGEPGTGKSMLGQAMAEL 83 Query: 87 LGSKV 91 L ++ Sbjct: 84 LPTET 88 Score = 34.3 bits (77), Expect = 0.12, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 65/172 (37%), Gaps = 32/172 (18%) Query: 297 GVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIR-----------GTEDIT 345 GVLF+DE+ L ++ L A++ PI + ++R ++ Sbjct: 203 GVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSEMSSGAMVRTEPVPCDFVLVAAGNLD 262 Query: 346 SPHGIPLDLLDR-------VMIIRTMLYTPQEMKQIIKIRAQTEGIN-----ISEEALNH 393 + + L R V + TM T + +++++ AQ + ++EA+ Sbjct: 263 TVDKMHPALRSRIRGYGYEVYMRTTMPDTIENRRKLVQFVAQEVKRDGKIPHFTKEAVEE 322 Query: 394 LGEIGTKTT---------LRYSVQLLTPANLLAKINGKDSIEKEHVEEISEL 436 + K LR ++ A +A GK +E+E V E ++ Sbjct: 323 IVREAQKRAGRKGHLTLRLRDLGGIVRAAGDIAVKKGKKYVEREDVIEAVKM 374 >4LJ8-A nrPDB Length = 339 Score = 38.6 bits (88), Expect = 0.005, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 54/167 (32%), Gaps = 28/167 (16%) Query: 39 LVGQENAREACGVIVEL----IKSKKMAGRAVLLAGPPGTGKTALALAIA------QELG 88 +VGQ+ A A + +K + L GP G GKT LA +A +E Sbjct: 45 VVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAM 104 Query: 89 SKVPFCPMVGSEVYSTEIKKTEVLM---ENFRRAIGLRIKETKEVYEGEVTELTPC---- 141 ++ + S I + E + +R + + E+ + P Sbjct: 105 IQIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPDVFNI 164 Query: 142 -----ETENPMGGYGKTISHVIIGLKTAKGTKQLKLD-PSIFESLQK 182 + +G+T+ + L P I E LQK Sbjct: 165 LLQILDDGRLTDSHGRTVDFRNTVIILTS-----NLGSPLILEGLQK 206 >1UM8-A nrPDB Length = 376 Score = 38.2 bits (87), Expect = 0.008, Method: Composition-based stats. Identities = 54/293 (18%), Positives = 102/293 (34%), Gaps = 26/293 (8%) Query: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYST----EIKK--TEVLMENFRRA 119 +LL GP G+GKT +A +A+ L P+ S+ S + + +L + + Sbjct: 75 ILLIGPTGSGKTLMAQTLAKHLD-----IPIAISDATSLTEAGYVGEDVENILTRLLQAS 129 Query: 120 -IGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFE 178 ++ + V+ E+ +++ + LK +G + + P Sbjct: 130 DWNVQKAQKGIVFIDEIDKISRLSENRSITRDVSGEGVQQALLKIVEG-SLVNIPPK--- 185 Query: 179 SLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKE---II 235 + G+ I I+ + G D A + V + KKE I+ Sbjct: 186 --GGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAIL 243 Query: 236 QDVTLHDLDVANARPQ--GGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAE 293 V HDL P+ G +LS + + +I K + + K + + Sbjct: 244 HLVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVD 303 Query: 294 LVPGVLFVDEVHMLDIECFT---YLHRALESSIAPIVIFASNRGNCVIRGTED 343 L+ + E+ L +E T L +E I+ +R T+D Sbjct: 304 LIFEEEAIKEIAQLALERKTGARGLRAIIEDFCLDIMFDLPKLKGSEVRITKD 356 >3GP8-A nrPDB Length = 574 Score = 38.2 bits (87), Expect = 0.008, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 13/79 (16%) Query: 23 GLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALA 82 G G D+ + K+A GL E +++ + ++ V+L G PGTGK+ A Sbjct: 174 GAGNDDWAVPKKARKGLS------EEQASVLDQLAGHRL----VVLTGGPGTGKSTTTKA 223 Query: 83 I---AQELGSKVPFCPMVG 98 + A+ LG +V C G Sbjct: 224 VADLAESLGLEVGLCAPTG 242 >1SXJ-C nrPDB Length = 340 Score = 37.4 bits (85), Expect = 0.014, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 22/116 (18%) Query: 33 KQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVP 92 + + GQ V+ K+ +L GPPGTGKT+ +A+A+E+ K Sbjct: 21 PETLDEVYGQNEVITTVRKFVD---EGKLP--HLLFYGPPGTGKTSTIVALAREIYGK-N 74 Query: 93 FCPMV---------GSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELT 139 + MV G +V +IK + F + K + E +T Sbjct: 75 YSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGF-------KLIILDEADAMT 123 >1SXJ-D nrPDB Length = 353 Score = 37.4 bits (85), Expect = 0.014, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 82/242 (33%), Gaps = 29/242 (11%) Query: 48 ACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIK 107 A V+ + +KS + +L GPPGTGKT+ LA+ +EL G ++ + I Sbjct: 45 AVTVLKKTLKSANLP--HMLFYGPPGTGKTSTILALTKEL---------YGPDLMKSRIL 93 Query: 108 KTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGT 167 + E R I + ++ K V++ + + EN K I TA Sbjct: 94 ELNASDE---RGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQ 150 Query: 168 KQLKLDPSIFESLQKERVEAGDVIY-IEANSGAVKR-----QGRCDTYATEFDLEAEEYV 221 L+ + + + + V I+ + + + + +E V Sbjct: 151 SALRRTMETYSGVTRFCLICNYVTRIIDPLASQCSKFRFKALDASNAIDRLRFISEQENV 210 Query: 222 PLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINK 281 G + + I D++ DL Q G IT E+ Sbjct: 211 KCDDGVLER----ILDISAGDLRRGITLLQSASK-----GAQYLGDGKNITSTQVEELAG 261 Query: 282 VV 283 VV Sbjct: 262 VV 263 >4FW9-A nrPDB Length = 732 Score = 37.0 bits (84), Expect = 0.018, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 45/136 (33%), Gaps = 27/136 (19%) Query: 41 GQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGK--TALALAIAQ--ELGSKVPFCPM 96 GQE AREA + + G L GPP GK LA Q E + + P+ Sbjct: 31 GQERAREALELAI-------RGGFHAYLVGPPSLGKHEALLAYLSTQSVETPPDLLYVPL 83 Query: 97 -----------VGSEVYSTE-----IKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTP 140 G E++ E + + L E FR+ LR K E E E Sbjct: 84 SERKVAVMTLPSGQEIHLAEAVEGLLLEVNRLDELFRQGSFLREKTQLEARFKEAREQQL 143 Query: 141 CETENPMGGYGKTISH 156 G +S Sbjct: 144 EALRREAQEAGFALST 159 >3SR0-A nrPDB Length = 206 Score = 37.0 bits (84), Expect = 0.019, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 55/141 (39%), Gaps = 14/141 (9%) Query: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIK 125 ++ GPPG GK A +A+E G F + ++ ++K L + + + Sbjct: 3 LVFLGPPGAGKGTQAKRLAKEKG----FVHISTGDILREAVQKGTPLGKKAKEYMERGEL 58 Query: 126 ETKEVYEGEVTELTPCETENPMGGYGKTISHV-----IIGLKTAKGTKQLKL---DPSIF 177 ++ + E+ P G+ +T+ ++ K K L D + Sbjct: 59 VPDDLIIALIEEVFPKHGNVIFDGFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVVI 118 Query: 178 ESLQKERV--EAGDVIYIEAN 196 E L R+ E G+V +++ N Sbjct: 119 ERLSGRRINPETGEVYHVKYN 139 >6QEL-G nrPDB Length = 245 Score = 37.0 bits (84), Expect = 0.019, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 68/183 (37%), Gaps = 23/183 (12%) Query: 11 KTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAG 70 K QR + S ++ L + S + GQ NA VE +A + + +G Sbjct: 52 KMQRTFNRSGIRPLHQNCSFENYRVECE--GQMNALSKARQYVEEF-DGNIA--SFIFSG 106 Query: 71 PPGTGKTALALAIAQEL---GSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKET 127 PGTGK LA AI EL G V + ++ S + + FR + + Sbjct: 107 KPGTGKNHLAAAICNELLLRGKSVLIITVA--DIMS-------AMKDTFRNSGTSEEQLL 157 Query: 128 KEVYEGEVTELTPCETENPM-GGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQK---E 183 ++ V L E Y K I + I+ +++ L S E + K E Sbjct: 158 NDL--SNVDLLVIDEIGVQTESKYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMTKLLGE 215 Query: 184 RVE 186 RV Sbjct: 216 RVM 218 >6EMW-B nrPDB Length = 225 Score = 36.6 bits (83), Expect = 0.020, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 21/146 (14%) Query: 9 TTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVEL----IKSKKMAGR 64 TK S K L L+++ + ++GQ++A + V +K K Sbjct: 1 LTKINETESE---KLLSLEDTLHER-----VIGQKDAVNSISKAVRRARAGLKDPKRPIG 52 Query: 65 AVLLAGPPGTGKTALALAIAQEL-GSKVPFCPMVGSEVY-----STEIKKTEVLM---EN 115 + + GP G GKT LA A+A+ + G + SE S + + + Sbjct: 53 SFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDG 112 Query: 116 FRRAIGLRIKETKEVYEGEVTELTPC 141 + +R K + E+ + P Sbjct: 113 GQLTEKVRRKPYSVILFDEIEKAHPD 138 >6AMN-A nrPDB Length = 349 Score = 36.6 bits (83), Expect = 0.021, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 13/110 (11%) Query: 5 EVKSTTKTQRIASHS-----HVKGLGLDESGLAKQAASG-LVG-QENAREACGVIVELIK 57 E++ T+ + + ++ +D + A+Q ++G +E R V+ IK Sbjct: 143 ELRGNTRIDSRGADTNTPLEYLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRVLARRIK 202 Query: 58 SKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIK 107 S L G PG GKTA+ +AQ + + G++++S ++ Sbjct: 203 SNP------CLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLA 246 >5LKM-A nrPDB Length = 452 Score = 36.6 bits (83), Expect = 0.022, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 49/154 (31%), Gaps = 9/154 (5%) Query: 44 NAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSE--- 100 + ++ + G VL+ G PG GK+ L L ++ +L + G E Sbjct: 69 RTKTEMEEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLSQVGTVLYVSGEESAQ 128 Query: 101 ---VYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGE---VTELTPCETENPMGGYGKTI 154 + + + + + ++ E + + + + + G G Sbjct: 129 QIKLRAERLGDIDSEFYLYAETNMQSVRAEVERIQPDFLIIDSIQTIMSPEISGVQGSVS 188 Query: 155 SHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAG 188 + + + K + I + KE AG Sbjct: 189 QVREVTAELMQLAKTNNIAIFIVGHVTKEGTLAG 222 >5VY8-A nrPDB Length = 908 Score = 36.6 bits (83), Expect = 0.023, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 13/110 (11%) Query: 5 EVKSTTKTQRIASHS-----HVKGLGLDESGLAKQAASG-LVG-QENAREACGVIVELIK 57 E++ T+ + + ++ +D + A+Q ++G +E R V+ IK Sbjct: 146 ELRGNTRIDSRGADTNTPLEYLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRVLARRIK 205 Query: 58 SKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIK 107 S L G PG GKTA+ +AQ + + G++++S ++ Sbjct: 206 SNP------CLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLA 249 Score = 33.9 bits (76), Expect = 0.15, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 65/179 (36%), Gaps = 30/179 (16%) Query: 31 LAKQAASGLVGQENAREACGVIVELIKSKKMAGR---AVLLAGPPGTGKTALALAIAQ-- 85 + + +S +VGQ +A +A V L +S R + L G G+GKT LA +A Sbjct: 572 MERDLSSEVVGQMDAIKAVSNAVRLSRSGLANPRQPASFLFLGLSGSGKTELAKKVAGFL 631 Query: 86 ----ELGSKVPFCPMVGSEVYSTEIKKTEVLM---ENFRRAIGLRIKETKEVYEGEVTEL 138 ++ +V + S + T + E L+ K + EV + Sbjct: 632 FNDEDMMIRVDCSELSEKYAVSKLLGTTAGYVGYDEGGFLTNQLQYKPYSVLLFDEVEKA 691 Query: 139 TPC---------ETENPMGGYGKTI--SHVIIGLKTAKGTKQLKLDPSIFESLQKERVE 186 P + G GKTI S+ I+ + + L S Q +++ Sbjct: 692 HPDVLTVMLQMLDDGRITSGQGKTIDCSNCIVIMTS-------NLGAEFINSQQGSKIQ 743 >1QVR-A nrPDB Length = 854 Score = 36.3 bits (82), Expect = 0.027, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 13/116 (11%) Query: 39 LVGQENAREACGVIVEL----IKSKKMAGRAVLLAGPPGTGKTALALAIA------QELG 88 +VGQ+ A A + +K + L GP G GKT LA +A +E Sbjct: 560 VVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAM 619 Query: 89 SKVPFCPMVGSEVYSTEIKKTEVLM---ENFRRAIGLRIKETKEVYEGEVTELTPC 141 ++ + S I + E + +R + + E+ + P Sbjct: 620 IRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAHPD 675 Score = 30.1 bits (66), Expect = 2.2, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 11/110 (10%) Query: 3 IEEVKSTTKTQRIASHSHVKGL---GLDESGLAKQAASG-LVGQ-ENAREACGVIVELIK 57 ++E++ Q + S L G+D + LA + ++G+ E R +++ K Sbjct: 132 LKELRGGRTVQTEHAESTYNALEQYGIDLTRLAAEGKLDPVIGRDEEIRRVIQILLRRTK 191 Query: 58 SKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIK 107 + +L G PG GKTA+ +AQ + + G + S ++ Sbjct: 192 NNP------VLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMG 235 >1SXJ-B nrPDB Length = 323 Score = 36.3 bits (82), Expect = 0.031, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 56/155 (36%), Gaps = 18/155 (11%) Query: 33 KQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKV- 91 Q S +VG + + I K M ++++G PG GKT +A EL + Sbjct: 17 PQVLSDIVGNKETIDRLQQI---AKDGNMP--HMIISGMPGIGKTTSVHCLAHELLGRSY 71 Query: 92 --PFCPMVGSEVYSTEIKKTEVLMENF-RRAIGLRIKETKEVYEGEVTELTPCETENPMG 148 + S+ ++ + + +++F ++ + L + K V E +T G Sbjct: 72 ADGVLELNASDDRGIDVVRNQ--IKHFAQKKLHLPPGKHKIVILDEADSMT-------AG 122 Query: 149 GYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKE 183 + + + + I E LQ + Sbjct: 123 AQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSQ 157 >1R6B-X nrPDB Length = 758 Score = 35.9 bits (81), Expect = 0.039, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 4/63 (6%) Query: 39 LVGQENAREACGVIVELIKSK----KMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFC 94 + GQ+ A EA +++ ++ + L AGP G GKT + + +++ LG ++ Sbjct: 460 VFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRF 519 Query: 95 PMV 97 M Sbjct: 520 DMS 522 >3UPU-A nrPDB Length = 459 Score = 35.9 bits (81), Expect = 0.042, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 9/106 (8%) Query: 43 ENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTAL------ALAIAQELGSKVPFCPM 96 E + A ++++ IK KK V + GP GTG T L AL E G + Sbjct: 28 EGQKNAFNIVMKAIKEKK---HHVTINGPAGTGATTLTKFIIEALISTGETGIILAAPTH 84 Query: 97 VGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCE 142 ++ S K + + + + +E + EV +L C Sbjct: 85 AAKKILSKLSGKEASTIHSILKINPVTYEENVLFEQKEVPDLAKCR 130 >5M7N-A nrPDB Length = 454 Score = 35.9 bits (81), Expect = 0.043, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 17/90 (18%) Query: 66 VLLAGPPGTGKTALALAI-AQELGSKVPFCPMVGS---------EVYSTEIKKTEVLMEN 115 +++ GP G GK +A AI AQ + PF + + E++ TE+ E + Sbjct: 167 IMITGPSGAGKELVARAIHAQSSRANGPFVTVNAATITPERMEIELFGTEMDGGERKVGA 226 Query: 116 FRRAIGLRIKETKEVYEGEVTELTPCETEN 145 A G +Y EV ++ P ET+N Sbjct: 227 LEEAHG------GILYLDEVADM-PRETQN 249 >3U5Z-B nrPDB Length = 324 Score = 35.1 bits (79), Expect = 0.058, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 7/82 (8%) Query: 65 AVLLAGP-PGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLR 123 ++L P PGTGKT +A A+ ++ + + F + GS+ +I + NF A Sbjct: 49 HIILHSPSPGTGKTTVAKALCHDVNADMMF--VNGSDC---KIDFVRGPLTNFASAASF- 102 Query: 124 IKETKEVYEGEVTELTPCETEN 145 K + E E++ Sbjct: 103 DGRQKVIVIDEFDRSGLAESQR 124 >6EM8-A nrPDB Length = 818 Score = 35.1 bits (79), Expect = 0.058, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 21/146 (14%) Query: 9 TTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVEL----IKSKKMAGR 64 TK S K L L+++ + ++GQ++A + V +K K Sbjct: 488 LTKINETESE---KLLSLEDTLHER-----VIGQKDAVNSISKAVRRARAGLKDPKRPIG 539 Query: 65 AVLLAGPPGTGKTALALAIAQEL-GSKVPFCPMVGSEVY-----STEIKKTEVLM---EN 115 + + GP G GKT LA A+A+ + G + SE S + + + Sbjct: 540 SFIFLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDDG 599 Query: 116 FRRAIGLRIKETKEVYEGEVTELTPC 141 + +R K + E+ + P Sbjct: 600 GQLTEKVRRKPYSVILFDEIEKAHPD 625 Score = 32.0 bits (71), Expect = 0.58, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 67 LLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKE 126 +L G PG GKTA+A +AQ + + + V S ++ + +R R+K+ Sbjct: 205 VLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTK-YRGEFEERLKK 263 Query: 127 TKE 129 E Sbjct: 264 VME 266 >3PXI-A nrPDB Length = 758 Score = 34.7 bits (78), Expect = 0.089, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Query: 56 IKSKKMAGRAVLLAGPPGTGKTALALAIAQEL-GSKVPFCPMVGSEVYSTEIKKTEVLME 114 +K K + + GP G GKT LA A+A+ + G + + SE L E Sbjct: 514 LKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSGGQLTE 573 Query: 115 NFRR 118 RR Sbjct: 574 KVRR 577 Score = 29.7 bits (65), Expect = 3.1, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 8 STTKTQRIASHSHVKGLGLDESGLAKQAASG-LVGQENAREACGVIVELIKSKKMAGRAV 66 S T A+ + L D + +AK+ + ++G+ + ++ S++ V Sbjct: 150 SAAGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVL----SRRTKNNPV 205 Query: 67 LLAGPPGTGKTALALAIAQELGSK 90 L+ G PG GKTA+A +AQ++ + Sbjct: 206 LI-GEPGVGKTAIAEGLAQQIINN 228 >4EUN-A nrPDB Length = 200 Score = 34.7 bits (78), Expect = 0.096, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 16/29 (55%) Query: 60 KMAGRAVLLAGPPGTGKTALALAIAQELG 88 R V++ G G+GKT +A +A E G Sbjct: 26 GEPTRHVVVMGVSGSGKTTIAHGVADETG 54 >4YPL-A nrPDB Length = 555 Score = 34.3 bits (77), Expect = 0.10, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Query: 26 LDESGLAKQAASGLVGQENAREACGVIV---ELIKSKKMAGRA--VLLAGPPGTGKTALA 80 LD + + G ++ +E + +L + + +A ++L GPPG GKT+L Sbjct: 68 LDINHTRQVLDEDHYGLKDVKERILEYLAVRQLTQGLDVRNKAPILVLVGPPGVGKTSLG 127 Query: 81 LAIAQELGSKVPFCPMVG 98 +IA+ + K + G Sbjct: 128 RSIARSMNRKFHRISLGG 145 >1E94-E nrPDB Length = 449 Score = 34.3 bits (77), Expect = 0.10, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 24/133 (18%) Query: 39 LVGQENAREACGVIV----------ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELG 88 ++GQ+NA+ + + + E ++ + + +L+ GP G GKT +A +A+ Sbjct: 23 IIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTP-KNILMIGPTGVGKTEIARRLAK--L 79 Query: 89 SKVPFCPM----------VGSEVYSTEIKKTEVLMENFR-RAIGLRIKETKEVYEGEVTE 137 + PF + VG EV S T+ ++ R +AI +E+ E + + Sbjct: 80 ANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRYRAEELAEERILD 139 Query: 138 LTPCETENPMGGY 150 + +N G Sbjct: 140 VLIPPAKNNWGQT 152 >1P4S-A nrPDB Length = 181 Score = 33.9 bits (76), Expect = 0.13, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 8/101 (7%) Query: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIK 125 VLL GPPG GK A+ +A++LG +P + E++ I++ L +R + Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKLG--IP--QISTGELFRRNIEEGTKLGVEAKRYLDAGDL 58 Query: 126 ETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKG 166 ++ EL NP G + ++ AK Sbjct: 59 VPSDL----TNELVDDRLNNPDAANGFILDGYPRSVEQAKA 95 >4YPN-A nrPDB Length = 293 Score = 33.9 bits (76), Expect = 0.13, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Query: 26 LDESGLAKQAASGLVGQENAREACGVIV---ELIKSKKMAGRA--VLLAGPPGTGKTALA 80 LD + + G ++ +E + +L + + +A ++L GPPG GKT+L Sbjct: 101 LDINHTRQVLDEDHYGLKDVKERILEYLAVRQLTQGLDVRNKAPILVLVGPPGVGKTSLG 160 Query: 81 LAIAQELGSKVPFCPMVG 98 +IA+ + K + G Sbjct: 161 RSIARSMNRKFHRISLGG 178 >6E11-1 nrPDB Length = 906 Score = 33.9 bits (76), Expect = 0.14, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 13/116 (11%) Query: 36 ASGLVGQENAREACGVIV----ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQEL-GSK 90 + ++G E+ ++ V +K + L GP G GKT LA +A EL SK Sbjct: 600 SKSIIGNEDIIKSLSDAVVKAATGMKDPEKPIGTFLFLGPTGVGKTELAKTLAIELFNSK 659 Query: 91 VPFCPMVGSEV-----YSTEIKKTE---VLMENFRRAIGLRIKETKEVYEGEVTEL 138 + SE S ++ + +R K V E+ + Sbjct: 660 DNLIRVNMSEFTEAHSVSKITGSPPGYVGFSDSGQLTEAVREKPHSVVLFDELEKA 715 >6G1K-A nrPDB Length = 921 Score = 33.9 bits (76), Expect = 0.15, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 4/109 (3%) Query: 173 DPSIFESLQKE--RVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHK 230 D E L +E + D+ + + R T A + D A + V P+G + Sbjct: 723 DAKTEEGLTEENFKELKQDISSFRYEVIGMMKGNRKSTRANKSDTSASD-VSHPEGSLQY 781 Query: 231 KKEIIQDVTLHDLDVANA-RPQGGQDILSMMGQLMKPKKTEITDKLRGE 278 + Q+ LH DV A + Q ++ + +G L +T+ + + Sbjct: 782 SSALKQNSKLHLYDVTTALQQQNSEEAKASLGCLANGSAVVLTEPILKD 830 >3CRV-A nrPDB Length = 551 Score = 33.9 bits (76), Expect = 0.16, Method: Composition-based stats. Identities = 50/259 (19%), Positives = 95/259 (36%), Gaps = 29/259 (11%) Query: 42 QENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV 101 QE ++ ++E +++ + V L P G+GKT +L ++ E+ KV F +E Sbjct: 8 QEKLKDK---VIEGLRNNFL----VALNAPTGSGKTLFSLLVSLEVKPKVLFVVRTHNEF 60 Query: 102 YSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGL 161 Y T +I+E + + + G + I L Sbjct: 61 YPIYRDLT-------------KIREKRNITFSFLVGKPSSCLYAEKGAESEDIPCKYCEL 107 Query: 162 KTAKGTKQLKLDP-SIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEY 220 K + + P S+ + L+K+ ++ Y + K TY F E+ Sbjct: 108 KGSIVEVKTDDSPLSLVKKLKKDGLQDKFCPYYSLLNSLYKADVIALTYPYFFIDRYREF 167 Query: 221 VPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTE---ITDKLRG 277 + D+ ++ +I H+LD N + +++ + + K E I KL Sbjct: 168 I-----DIDLREYMIVIDEAHNLDKVNELEERSLSEITIQMAIKQSKSEESRRILSKLLN 222 Query: 278 EINKVVNKYIDQGVAELVP 296 ++ +VV E VP Sbjct: 223 QLREVVLPDEKYIKVENVP 241 >3SYK-A nrPDB Length = 309 Score = 33.6 bits (75), Expect = 0.17, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 18/112 (16%) Query: 43 ENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELG-----SKVPFCPMV 97 E AR+ G+ + + + G PGTGKT +AL +A L K + Sbjct: 53 ERARQKLGL------AHETPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVT 106 Query: 98 GSEVYSTEIKKTE-VLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMG 148 ++ I T E +RA+G ++ E L + E G Sbjct: 107 RDDLVGQYIGHTAPKTKEVLKRAMG------GVLFIDEAYYLYRPDNERDYG 152 Score = 29.7 bits (65), Expect = 3.1, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 69/206 (33%), Gaps = 42/206 (20%) Query: 272 TDKLRGEINKVVNKYIDQGVAELVPGVLFVDEVHMLDI---------ECFTYLHRALESS 322 D L G+ + + + GVLF+DE + L E L + +E++ Sbjct: 107 RDDLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENN 166 Query: 323 IAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTML---YTPQEMKQIIKIRA 379 +V+ + + R S G R I + Y+ +E+ +I Sbjct: 167 RDDLVVILAGYAD---RMENFFQSNPGF------RSRIAHHIEFPDYSDEELFEIAGHML 217 Query: 380 QTEGINISEEALNHL-GEIGT------------------KTTLRYSVQLLTPANLLAKIN 420 + ++ EA L IG + LR + +L T ++ Sbjct: 218 DDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDAR 277 Query: 421 GKDSIEKEHVE--EISELFYDAKSSA 444 +I +E + + + D++ A Sbjct: 278 ALSTIAEEDIRASRVFKGGLDSERRA 303 >3CM0-A nrPDB Length = 186 Score = 33.6 bits (75), Expect = 0.18, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 4/80 (5%) Query: 63 GRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGL 122 G+AV+ GPPG GK A +AQELG F + ++ + + L E R + Sbjct: 4 GQAVIFLGPPGAGKGTQASRLAQELG----FKKLSTGDILRDHVARGTPLGERVRPIMER 59 Query: 123 RIKETKEVYEGEVTELTPCE 142 ++ + E Sbjct: 60 GDLVPDDLILELIREELAER 79 >6D00-1 nrPDB Length = 883 Score = 33.6 bits (75), Expect = 0.20, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Query: 39 LVGQENAREACGVIVEL----IKSKKMAGRAVLLAGPPGTGKTALALAIAQ 85 +VGQ+ A +A + L ++++ + L GP G GKT +A Sbjct: 572 VVGQDEAIKAICDAIRLSRTGLQNRNRPLASFLFLGPTGCGKTLCVKELAA 622 Score = 30.1 bits (66), Expect = 2.0, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 9/89 (10%) Query: 3 IEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASG----LVGQENAREACGVIVELIKS 58 + V+ + + ++ + L L + AASG ++G++ ++ Sbjct: 140 VTHVRGNRRVESKSAEEAYEALSKYCIDLTELAASGKLDPVIGRDEIISRVIRVL----- 194 Query: 59 KKMAGRAVLLAGPPGTGKTALALAIAQEL 87 + L G PG GKTA+A +A + Sbjct: 195 SRRTKNNPCLVGEPGVGKTAIAEGLANRI 223 >5GKO-A nrPDB Length = 671 Score = 33.2 bits (74), Expect = 0.25, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 79/219 (36%), Gaps = 5/219 (2%) Query: 37 SGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPM 96 S LV + A E+ I++ I G V + G G+GK+ L + + Sbjct: 17 SNLVREFPAGESTIQILKGIDLTIYEGELVAIVGQSGSGKSTLMNILGCLDRPTSGSYKV 76 Query: 97 VGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEV-YEGEVTELTPCETENPMGGYGKT-- 153 G E E + L + I R ++ EG V P + Sbjct: 77 NGQETGKLEPDQLAQLRREYFGFIFQRYHLLGDLSAEGNVEVPAVYAGVTPADRKQRATA 136 Query: 154 -ISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATE 212 ++ + +G KT QL S+ + + GDVI + +GA+ + Sbjct: 137 LLTELGLGTKTQNRPSQLSGGQQQRVSIARALMNGGDVILADEPTGALDSHSGVEVMRIL 196 Query: 213 FDLEAEEY-VPLPKGDVHKKKEIIQDVTLHDLDVANARP 250 +L A + + L D+ K + + + D ++ + RP Sbjct: 197 RELNAAGHTIILVTHDMQVAKNATRIIEISDGEIISDRP 235 >2GZA-A nrPDB Length = 361 Score = 33.2 bits (74), Expect = 0.25, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 4/49 (8%) Query: 45 AREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPF 93 A + G + ++ R +++AG G+GKT L A+ QE +PF Sbjct: 157 ALKEAGDYMSFLRRAVQLERVIVVAGETGSGKTTLMKALMQE----IPF 201 >2VL7-A nrPDB Length = 540 Score = 33.2 bits (74), Expect = 0.26, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 4/59 (6%) Query: 47 EACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTE 105 E G + +K G+ +LL PG GKT + +L KV S++ S Sbjct: 14 EKLGEAINALKH----GKTLLLNAKPGLGKTVFVEVLGMQLKKKVLIFTRTHSQLDSIY 68 >2PJZ-A nrPDB Length = 263 Score = 33.2 bits (74), Expect = 0.27, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%) Query: 60 KMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEV--YSTEIKKTEVLMENFR 117 ++ G V++ GP G+GKT L AI+ L + G EV I+ + L E + Sbjct: 27 EVNGEKVIILGPNGSGKTTLLRAISGLLPYSGNIF-INGMEVRKIRNYIRYSTNLPEAYE 85 Query: 118 RAIGLRIKETKEVYE 132 IG+ + + +YE Sbjct: 86 --IGVTVNDIVYLYE 98 >1IM2-A nrPDB Length = 444 Score = 33.2 bits (74), Expect = 0.27, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 13/73 (17%) Query: 39 LVGQENAREACGVIV----------ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELG 88 ++GQ +A+ A + + E ++ + + +L+ GP G GKT +A +A+ Sbjct: 17 IIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTP-KNILMIGPTGVGKTEIARRLAK--L 73 Query: 89 SKVPFCPMVGSEV 101 + PF + ++ Sbjct: 74 ANAPFIKVEATKF 86 >2I3B-A nrPDB Length = 189 Score = 32.8 bits (73), Expect = 0.32, Method: Composition-based stats. Identities = 13/28 (46%), Positives = 15/28 (53%) Query: 63 GRAVLLAGPPGTGKTALALAIAQELGSK 90 R V L GPPG GKT L ++ L S Sbjct: 1 ARHVFLTGPPGVGKTTLIHKASEVLKSS 28 >5BQ5-A nrPDB Length = 189 Score = 32.4 bits (72), Expect = 0.44, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 3/36 (8%) Query: 64 RAVLLAGPPGTGKTALALAIAQEL---GSKVPFCPM 96 +L GPPG GKT LA++I E G K F Sbjct: 40 ENILFLGPPGIGKTHLAISIGMEAIARGYKTYFITA 75 >3FVQ-A nrPDB Length = 359 Score = 32.4 bits (72), Expect = 0.47, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 16/43 (37%) Query: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYST 104 G + + G G GKT L +A + G ++S Sbjct: 29 PGEILFIIGASGCGKTTLLRCLAGFEQPDSGEISLSGKTIFSK 71 >3VTF-A nrPDB Length = 444 Score = 32.4 bits (72), Expect = 0.48, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 2/63 (3%) Query: 71 PPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEV 130 PPGT + +A A+A+E G V F E E E + R IG + Sbjct: 147 PPGTTEGLVARAVAEEAGG-VKFSVASNPEFL-REGSALEDFFKPDRIVIGAGDERAASF 204 Query: 131 YEG 133 Sbjct: 205 LLD 207 >5JZV-A nrPDB Length = 206 Score = 32.0 bits (71), Expect = 0.50, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 6/41 (14%) Query: 56 IKSKKMAGRA------VLLAGPPGTGKTALALAIAQELGSK 90 + + GR +LL G PG GKT L +A + G K Sbjct: 24 MTGGQQMGRGSMLLPNILLTGTPGVGKTTLGKELASKSGLK 64 >3R8F-A nrPDB Length = 324 Score = 32.0 bits (71), Expect = 0.61, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 23/59 (38%) Query: 32 AKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSK 90 K + E R A V+ E +++ + + G GTGKT L A E + Sbjct: 6 PKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKR 64 >1Y63-A nrPDB Length = 184 Score = 32.0 bits (71), Expect = 0.61, Method: Composition-based stats. Identities = 14/25 (56%), Positives = 18/25 (72%) Query: 63 GRAVLLAGPPGTGKTALALAIAQEL 87 G +L+ G PGTGKT++A IA EL Sbjct: 10 GINILITGTPGTGKTSMAEMIAAEL 34 >4XGC-D nrPDB Length = 459 Score = 32.0 bits (71), Expect = 0.62, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 45 AREACGVIVELIKSKKMA-GRAVLLAGPPGTGKTALALAIAQELGSKVPF 93 A+E V + L ++ +M ++LL GP G+GKT L ++ +L F Sbjct: 30 AKERSNVRLLLQRTAEMGESNSLLLLGPRGSGKTTLINSVLADLLPNKSF 79 >4FWV-A nrPDB Length = 355 Score = 31.6 bits (70), Expect = 0.67, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 42/133 (31%), Gaps = 27/133 (20%) Query: 44 NAREACGVIVELIKSKKMAGRAVLLAGPPGTGK--TALALAIAQ--ELGSKVPFCPM--- 96 AREA + + G L GPP GK LA Q E + + P+ Sbjct: 2 QAREALELAI-------RGGFHAYLVGPPSLGKHEALLAYLSTQSVETPPDLLYVPLSER 54 Query: 97 --------VGSEVYSTE-----IKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCET 143 G E++ E + + L E FR+ LR K E E E Sbjct: 55 KVAVMTLPSGQEIHLAEAVEGLLLEVNRLDELFRQGSFLREKTQLEARFKEAREQQLEAL 114 Query: 144 ENPMGGYGKTISH 156 G +S Sbjct: 115 RREAQEAGFALST 127 >3EC2-A nrPDB Length = 180 Score = 31.6 bits (70), Expect = 0.70, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Query: 40 VGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALA----LAIAQELGSKVPFC 94 V Q A V V ++ G+ + G PG GKT LA AI ++ G + F Sbjct: 17 VSQNRALLTIRVFVHNFNPEE--GKGLTFVGSPGVGKTHLAVATLKAIYEKKGIRGYFF 73 >1G8P-A nrPDB Length = 350 Score = 31.6 bits (70), Expect = 0.73, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 7/69 (10%) Query: 35 AASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELG--SKVP 92 S +VGQE+ + A L+ + VL+ G GTGK+ A+A L V Sbjct: 22 PFSAIVGQEDMKLAL-----LLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVE 76 Query: 93 FCPMVGSEV 101 CP+ V Sbjct: 77 GCPVSSPNV 85 >6ED3-A nrPDB Length = 848 Score = 31.6 bits (70), Expect = 0.76, Method: Composition-based stats. Identities = 70/455 (15%), Positives = 150/455 (32%), Gaps = 76/455 (16%) Query: 1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASG-LVGQENAREACGVIVELIKSK 59 +K+ T + A++ ++ D + A++ ++G++N ++ S+ Sbjct: 141 VKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPVIGRDNEIRRVVQVL----SR 196 Query: 60 KMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRA 119 + VL+ G PG GKTA+ +AQ +V +V + KT V ++ Sbjct: 197 RTKNNPVLI-GEPGVGKTAIVEGLAQR---------IVAGDVPESLRDKTIVALDLGSMV 246 Query: 120 IGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGL-KTAKGTKQLKLDPSIFE 178 G + + E + + +N G I + + A G + I Sbjct: 247 AGSKYRGE----FEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKP 302 Query: 179 SLQKERVEAGDVIYIEANSGAVKR---QGRCDTYATEFDLEAEEYVPLPKGDVHKKKEII 235 L + + ++ +++ R + E+ + + +G + + E+ Sbjct: 303 MLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRG-LKDRYEVH 361 Query: 236 QDVTLHDLDVANARPQGGQDILSMMGQLMKPKKT-----EITDKLRGEINKVVNKYIDQG 290 V + D + A + I + P K E +LR EI+ + Sbjct: 362 HGVRITDSALVAAATLSDRYITARFL----PDKAIDLVDEAASRLRMEIDSRPVE----- 412 Query: 291 VAELVPGVLFVDEVHML--DIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPH 348 +DEV L +E E AS +R Sbjct: 413 ----------IDEVERLVRRLEIEEMALSKEEDE-------ASAERLAKLRSEL------ 449 Query: 349 GIPLDLLDRVMIIRTMLYTPQEMKQIIK-IRAQTEGINISEEALNHLGEIGTKTTLRYSV 407 D +++ + T + +I++ ++ Q E + E G++ LRY Sbjct: 450 ---ADQKEKLAELTTRWQNEKNAIEIVRDLKEQLEALRGESERAERDGDLAKAAELRYGR 506 Query: 408 ---------QLLTPANLLAKINGKDSIEKEHVEEI 433 L A ++ K+ + + + ++ Sbjct: 507 IPEVEKKLDAALPQAQAREQVMLKEEVGPDDIADV 541 Score = 30.5 bits (67), Expect = 1.6, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 4/50 (8%) Query: 39 LVGQENAREACGVIVELIK----SKKMAGRAVLLAGPPGTGKTALALAIA 84 ++GQ+ A A V + A + GP G GKT LA A+A Sbjct: 572 VIGQKAAVTAVSDAVRRSRAGVSDPNRPTGAFMFLGPTGVGKTELAKALA 621 >6EMW-E nrPDB Length = 181 Score = 31.2 bits (69), Expect = 0.88, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 67 LLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKE 126 +L G PG GKTA+A +AQ + + + V S ++ + +R R+K+ Sbjct: 44 VLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTK-YRGEFEERLKK 102 Query: 127 TKE 129 E Sbjct: 103 VME 105 >3B5X-A nrPDB Length = 582 Score = 31.2 bits (69), Expect = 0.88, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 61/190 (32%), Gaps = 22/190 (11%) Query: 63 GRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEV----LMENFRR 118 G+ V L G G+GK+ +A + + G +V ++ + +N Sbjct: 369 GKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHL 428 Query: 119 AIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGT--KQLKLDPSI 176 EGE T + + I ++ GL T G L Sbjct: 429 FNDTIANNIAYAAEGEYTREQIEQAARQAHAM-EFIENMPQGLDTVIGENGTSLSGGQRQ 487 Query: 177 FESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQ 236 ++ + + V+ ++ + A+ D E+E + ++ K K ++ Sbjct: 488 RVAIARALLRDAPVLILDEATSAL-------------DTESERAIQAALDELQKNKTVL- 533 Query: 237 DVTLHDLDVA 246 V H L Sbjct: 534 -VIAHRLSTI 542 >4XGC-E nrPDB Length = 460 Score = 31.2 bits (69), Expect = 0.90, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 43 ENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSK 90 E A E G ++ S + A+ L G GTGKTAL A +E G + Sbjct: 16 EAAIETLGELIG--DSSETYPSAIYLFGHSGTGKTALTRAFLKECGKR 61 >3Q8X-B nrPDB Length = 287 Score = 31.2 bits (69), Expect = 0.93, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 55/127 (43%), Gaps = 9/127 (7%) Query: 54 ELIKSKK--MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEV 111 ELI+ KK + A LL G PG+GKT+L AI +E V ++ ++ + + + Sbjct: 22 ELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVI---VIDNDTFKQQHPNFDE 78 Query: 112 LMENFRRAIGLRIKETKEVYEGEVTELTPCETEN-PMGGYGKTISHVIIGLKTAKGTKQL 170 L++ + + + + + + N + G G+T + ++TA + Sbjct: 79 LVKLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTD---VPIQTATMLQAK 135 Query: 171 KLDPSIF 177 + ++ Sbjct: 136 GYETKMY 142 >3IIK-A nrPDB Length = 180 Score = 31.2 bits (69), Expect = 1.0, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 15/25 (60%) Query: 66 VLLAGPPGTGKTALALAIAQELGSK 90 +LL G PG GKT L +A + G K Sbjct: 14 ILLTGTPGVGKTTLGKELASKSGLK 38 >1TAF-A nrPDB Length = 68 Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 4/72 (5%) Query: 368 PQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEK 427 P++ + I+ I + +N L + T RY +L A + A K +I+ Sbjct: 1 PKDAQVIMSILKELNVQEYEPRVVNQL----LEFTFRYVTSILDDAKVYANHARKKTIDL 56 Query: 428 EHVEEISELFYD 439 + V +E+ D Sbjct: 57 DDVRLATEVTLD 68 >5K1S-A nrPDB Length = 362 Score = 30.9 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 14/168 (8%) Query: 146 PMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGR 205 P+GG G+ + + ++ + +V AG+ + I SG V G Sbjct: 145 PVGGLGRVPASLPWNEAATVCCTT---GTAVHTVRTRGKVRAGETVLITGASGGV---GL 198 Query: 206 CDTYATEFDLEAEEYVPLPKGDVHKKKEIIQD--VTLHDLDVAN---ARPQG-GQDILSM 259 D V + V KE D + LD A+ R QG G D+ Sbjct: 199 SSVQLARLDGARVIAVTSSEAKVQALKEAGADEVIVSRGLDFASDVRKRTQGAGVDVAVE 258 Query: 260 MGQLMKPKKTEITDKLRGEINKVVNKYIDQGVAELVPGVLFVDEVHML 307 + +T + G VV ++ G+ +L PG++ V E+ +L Sbjct: 259 IVGSATFDQT-LKSMAPGGRVVVVGN-LESGMVQLNPGLVIVKELEIL 304 >2V1U-A nrPDB Length = 387 Score = 30.9 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 37/105 (35%), Gaps = 37/105 (35%) Query: 44 NAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALAL---------------------- 81 R V+ ++ +K + LL G GTGKTA+A Sbjct: 27 ELRRLAEVLAPALRGEKPSN--ALLYGLTGTGKTAVARLVLRRLEARASSLGVLVKPIYV 84 Query: 82 -------------AIAQELGSKVPFCPMVGSEVYSTEIKKTEVLM 113 AIA+ +G +VPF + EVY +K+ L Sbjct: 85 NARHRETPYRVASAIAEAVGVRVPFTGLSVGEVYERLVKRLSRLR 129 >2C9Y-A nrPDB Length = 242 Score = 30.9 bits (68), Expect = 1.2, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 22/159 (13%) Query: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIG 121 RAVLL GPPG GK A +A+ C + ++ + L + + + Sbjct: 16 GIRAVLL-GPPGAGKGTQAPRLAE----NFCVCHLATGDMLRAMVASGSELGKKLKATMD 70 Query: 122 LRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKG------TKQLKLDPS 175 K V + V EL E P+ G + ++ A+ ++ KLD Sbjct: 71 AG----KLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSV 126 Query: 176 IFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFD 214 I D + I +G + +Y EF+ Sbjct: 127 I-------EFSIPDSLLIRRITGRLIHPKSGRSYHEEFN 158 >3J3U-A nrPDB Length = 810 Score = 30.9 bits (68), Expect = 1.3, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 18/32 (56%) Query: 56 IKSKKMAGRAVLLAGPPGTGKTALALAIAQEL 87 +K K + + GP G GKT LA A+A+ + Sbjct: 531 LKDPKRPIGSFIFLGPTGVGKTELARALAESI 562 Score = 30.1 bits (66), Expect = 1.9, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 54/123 (43%), Gaps = 7/123 (5%) Query: 8 STTKTQRIASHSHVKGLGLDESGLAKQAASG-LVGQENAREACGVIVELIKSKKMAGRAV 66 S T A+ + L D + +AK+ + ++G+ + ++ S++ V Sbjct: 150 SAAGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVL----SRRTKNNPV 205 Query: 67 LLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKE 126 L+ G PG GKTA+A +AQ++ + + V + ++ + +R R+K+ Sbjct: 206 LI-GEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGTVVAGTK-YRGEFEDRLKK 263 Query: 127 TKE 129 + Sbjct: 264 VMD 266 >5D4W-A nrPDB Length = 926 Score = 30.9 bits (68), Expect = 1.4, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Query: 39 LVGQENAREACGVIVELIKSK-KMAGR--AVLLAGPPGTGKTALALAIAQ 85 +VGQ+ A ++ + L +S + + L GP GTGKT L A+A+ Sbjct: 600 VVGQKEAVQSVSNAIRLQRSGLSNPNQPPSFLFCGPSGTGKTLLTKALAE 649 Score = 30.1 bits (66), Expect = 2.2, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 49/112 (43%), Gaps = 13/112 (11%) Query: 3 IEEVKSTTKTQRIASHS-----HVKGLGLDESGLAKQAASG-LVGQENAREACGVIVELI 56 I+ ++ + + + ++ +D + +A++ ++G+E I+ Sbjct: 155 IQAIRGNKRVDSRNADTEQENENLSKFCIDMTAMAREGKIDPVIGREEEIRRVIRIL--- 211 Query: 57 KSKKMAGRAVLLAGPPGTGKTALALAIAQEL-GSKVPFCPMVGSEVYSTEIK 107 S++ VL+ G PG GKT + +AQ + + VP + ++ S ++ Sbjct: 212 -SRRTKNNPVLI-GEPGVGKTTIVEGLAQRIVNADVP-DNLAACKLLSLDVG 260 >3W34-A nrPDB Length = 211 Score = 30.9 bits (68), Expect = 1.4, Method: Composition-based stats. Identities = 14/29 (48%), Positives = 19/29 (65%) Query: 68 LAGPPGTGKTALALAIAQELGSKVPFCPM 96 +AG +GKT LA A+A+ LG +V PM Sbjct: 11 IAGGTASGKTTLAQALARTLGERVALLPM 39 >3DZD-A nrPDB Length = 368 Score = 30.5 bits (67), Expect = 1.4, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 12/115 (10%) Query: 32 AKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKV 91 Q VG+ ++ I K VL+ G GTGK +A I + G K Sbjct: 124 PPQEEIEFVGEHPKILEIKRLIPKIAKSKAP---VLITGESGTGKEIVARLIHRYSGRKG 180 Query: 92 PFCPMVGSEVYSTEIKKTE-------VLMENFRRAIG-LRIKETKEVYEGEVTEL 138 F + + + E+ ++E R G L + + ++ EV EL Sbjct: 181 AFVDLNCASI-PQELAESELFGHEKGAFTGALTRKKGKLELADQGTLFLDEVGEL 234 >1SXJ-E nrPDB Length = 354 Score = 30.5 bits (67), Expect = 1.5, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 19/41 (46%) Query: 47 EACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQEL 87 E ++ + + +LL GP GTGK +A+ + + Sbjct: 20 EELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 60 >3C8U-A nrPDB Length = 208 Score = 30.5 bits (67), Expect = 1.5, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 25/42 (59%) Query: 49 CGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSK 90 C ++E + ++ + V L+G PG+GK+ L+ +A L ++ Sbjct: 8 CQGVLERLDPRQPGRQLVALSGAPGSGKSTLSNPLAAALSAQ 49 >5XA2-A nrPDB Length = 309 Score = 30.5 bits (67), Expect = 1.8, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 6/67 (8%) Query: 318 ALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKI 377 A+E + +P++ G I+G G D DR ++ + T E + + Sbjct: 201 AVEPAASPVLAG-GPAGRHKIQGIGA-----GFVPDTFDRSVVDEILSVTDDEAIETARK 254 Query: 378 RAQTEGI 384 A EGI Sbjct: 255 LAMEEGI 261 >4UPB-C nrPDB Length = 500 Score = 30.1 bits (66), Expect = 2.0, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 72/194 (37%), Gaps = 16/194 (8%) Query: 61 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPM-----VGSEVYSTEIKKTEVLMEN 115 ++G +V L GPPG K+ +A + + F + EV+ + Sbjct: 39 LSGESVFLLGPPGIAKSLIARRLKFAFQNARAFEYLMTRFSTPEEVFGPLSIQALKDEGR 98 Query: 116 FRRAIGLRIKETKEVYEGEVTELTPCETENPMGG-------YGKTISHVIIGLKTAKGTK 168 + R + E + V+ E+ + P + G + + + L A + Sbjct: 99 YERLTSGYLPEAEIVFLDEIWKAGPAILNTLLTAINERQFRNGAHVEKIPMRLLVAASNE 158 Query: 169 QLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDV 228 + D S+ E+L +R+ ++++ + + E D + + + + Sbjct: 159 LPEADSSL-EALY-DRMLIR--LWLDKVQDKANFRSMLTSQQDENDNPVPDALQVTDEEY 214 Query: 229 HKKKEIIQDVTLHD 242 + ++ I ++TL D Sbjct: 215 ERWQKEIGEITLPD 228 >2QGZ-A nrPDB Length = 308 Score = 30.1 bits (66), Expect = 2.0, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 2/88 (2%) Query: 5 EVKSTTKTQRIASHSH-VKGLGLDESGLAKQAASGLVGQENAREACGVIVELI-KSKKMA 62 E K + Q+ A+ S ++ + L +S + V + EA I++ + + Sbjct: 92 ETKELVEAQKQAAISERIQLVSLPKSYRHIHLSDIDVNNASRMEAFSAILDFVEQYPSAE 151 Query: 63 GRAVLLAGPPGTGKTALALAIAQELGSK 90 + + L G G GK+ L A+A EL K Sbjct: 152 QKGLYLYGDMGIGKSYLLAAMAHELSEK 179 >4CVN-A nrPDB Length = 191 Score = 30.1 bits (66), Expect = 2.2, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 60/135 (44%), Gaps = 3/135 (2%) Query: 66 VLLAGPPGTGKTALALAIAQELGSK-VPFCPMVGSEVYSTEI-KKTEVLMENFRRAIGLR 123 + + G PG GKT +A +A++LG + V + E+ + EV ++ + Sbjct: 14 IAITGTPGVGKTTIAKLLAEKLGYEYVNLRDFALEKGCGREVDGEVEVEIDELAYFVEKE 73 Query: 124 IKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKE 183 +K+ V +G ++ L P + + + + I + +K ++ + +++ E Sbjct: 74 LKDRNVVLDGHLSHLMPVDLVVVLRAHPRIIGERLRERGYSKEKIGENVEAELVDAILIE 133 Query: 184 RV-EAGDVIYIEANS 197 + E +VI ++ + Sbjct: 134 AIDEHENVIEVDTTN 148 >4XIG-S nrPDB Length = 363 Score = 30.1 bits (66), Expect = 2.2, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 48/145 (33%), Gaps = 26/145 (17%) Query: 52 IVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEV 111 +V + G V+L GP G GK+ +A + G + K +V Sbjct: 19 VVHGVSLDIEPGEFVVLVGPSGCGKSTTLRMVAGLEEISGGTIRIDGRVINDLAPKDRDV 78 Query: 112 LM--ENFRR----------AIGLRIKETKEVYEGEVTE-------LTPCETENPMGGYGK 152 M +N+ + GLR+K TK+ + L P P G Sbjct: 79 AMVFQNYALYPHLNVRDNISFGLRLKRTKKSVIDAAVKTAADILGLQPLLERKPSDLSGG 138 Query: 153 TISHVIIGLKTAKGTKQLKLDPSIF 177 V + G ++ DP +F Sbjct: 139 QRQRVAM------GRAIVR-DPKVF 156 >5W36-A nrPDB Length = 325 Score = 29.7 bits (65), Expect = 2.4, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 193 IEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVANARP-- 250 I ++G V G + D +YV P+ ++KK ++ + L D+A Sbjct: 101 IRTSAGEV--VGFGARRLFDDDAMEAKYVNTPETLLYKKSSVMFGIDLAKRDIAKGHQAV 158 Query: 251 --QGGQDILSMMGQ 262 +G D+++M Sbjct: 159 VVEGYTDVMAMHLA 172 >5OFO-C nrPDB Length = 871 Score = 29.7 bits (65), Expect = 2.4, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 4/51 (7%) Query: 39 LVGQENAREACGVIVELIK----SKKMAGRAVLLAGPPGTGKTALALAIAQ 85 ++GQ A +A + + + L GP G GKT L A+A Sbjct: 574 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAN 624 Score = 28.5 bits (62), Expect = 6.3, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 45/109 (41%), Gaps = 9/109 (8%) Query: 3 IEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASG----LVGQENAREACGVIVELIKS 58 IE+++ + + L L ++A G ++G++ +++ Sbjct: 144 IEQMRGGESVNDQGAEDQRQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQ---- 199 Query: 59 KKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIK 107 ++ VL+ G PG GKTA+ +AQ + + + G V + ++ Sbjct: 200 RRTKNNPVLI-GEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 247 >4M4W-J nrPDB Length = 317 Score = 29.7 bits (65), Expect = 2.4, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Query: 52 IVELIKSKKMAGRA--VLLAGPPGTGKTALALAIAQELGSK 90 + + +KS G+ + L G G GKT + AIA EL K Sbjct: 148 VTDFLKSYNETGKGKGLYLYGKFGVGKTFMLAAIANELAEK 188 >4CIU-A nrPDB Length = 727 Score = 29.7 bits (65), Expect = 2.5, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 4/51 (7%) Query: 39 LVGQENAREACGVIVELIK----SKKMAGRAVLLAGPPGTGKTALALAIAQ 85 ++GQ A +A + + + L GP G GKT L A+A Sbjct: 428 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAN 478 >6IC4-I nrPDB Length = 233 Score = 29.7 bits (65), Expect = 2.5, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 22/55 (40%) Query: 50 GVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYST 104 VI + I G+ + GP GTGKT L I +L + G ++ Sbjct: 14 RVIYDNISLNIRRGQITAIMGPSGTGKTTLLRLIGGQLVPDQGEVLLDGKDIAQM 68 >3O0O-A nrPDB Length = 644 Score = 29.7 bits (65), Expect = 2.7, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 62/163 (38%), Gaps = 14/163 (8%) Query: 89 SKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMG 148 + VPF +G Y EI++ + + FRR + L + E N + Sbjct: 454 NFVPF--AMGMSNYDDEIREVMKMTKEFRRNVALLTIAPTGSISNIADTSSGLEP-NFLL 510 Query: 149 GYGKTISHVIIGLKTAKGTKQL---KLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGR 205 Y + ++ + Q+ KL+P I + ++KE +E G + I +K+ Sbjct: 511 AYTRFVTKEDGTKEPLLYVNQVLREKLNPEILKRIEKELIEKGSLKDIPDVPEKIKKV-- 568 Query: 206 CDTYATEFD-----LEAEEYVPLPKGDVHKKKEIIQDVTLHDL 243 A + D L + + ++ K + Q T+ D+ Sbjct: 569 -FVVALDIDPMDHLLMQDAFQRYVDNNISKTINMPQSATVDDV 610 >5G3Y-A nrPDB Length = 226 Score = 29.7 bits (65), Expect = 2.8, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 90/232 (38%), Gaps = 22/232 (9%) Query: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIK 125 ++L GPPG GK A I +E G +P + +++ IK+ L + + Sbjct: 3 LILLGPPGAGKGTQAEKIVEEYG--IP--HISTGDMFRAAIKEGTELGLKAKEYMDKGEL 58 Query: 126 ETKEVYEGEVTE--LTP-CETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQK 182 EV G V E P C+ + G+ +T++ L +KLD I + + Sbjct: 59 VPDEVTIGLVKERLSQPDCKKGFLLDGFPRTVAQAE-ALDKILKELGIKLDAVINIEVPR 117 Query: 183 ERVEAGDVIYIEANSGA--VKRQGRCDTYATEFDLEAEEYVPLPK--GDVHKKKEIIQDV 238 E + +E +G ++ G TY F+ E V K G+++++ + ++ Sbjct: 118 EEL-------LERLTGRRVCRQCG--ATYHVIFNPPKVEGV-CDKCGGELYQRSDDNEET 167 Query: 239 TLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQG 290 + LDV + D G L + D + +I + + G Sbjct: 168 VSNRLDVYEDQTAPLIDYYEKKGLLKNIDGDQDIDAVFADIKAALGRDKQGG 219 >3PXG-A nrPDB Length = 468 Score = 29.3 bits (64), Expect = 3.2, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 8 STTKTQRIASHSHVKGLGLDESGLAKQAASG-LVGQENAREACGVIVELIKSKKMAGRAV 66 S T A+ + L D + +AK+ + ++G+ + ++ S++ V Sbjct: 150 SAAGTNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVL----SRRTKNNPV 205 Query: 67 LLAGPPGTGKTALALAIAQELGSK 90 L+ G PG GKTA+A +AQ++ + Sbjct: 206 LI-GEPGVGKTAIAEGLAQQIINN 228 >3Q72-A nrPDB Length = 166 Score = 28.9 bits (63), Expect = 4.7, Method: Composition-based stats. Identities = 11/20 (55%), Positives = 12/20 (60%) Query: 66 VLLAGPPGTGKTALALAIAQ 85 VLL G PG GK+ALA Sbjct: 5 VLLLGAPGVGKSALARIFGG 24 >4NMN-A nrPDB Length = 434 Score = 28.9 bits (63), Expect = 4.8, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Query: 53 VELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVL 112 ++L + G ++LA PG GKTA L+I L S V+S E+ K +++ Sbjct: 183 LDLKTTGFHPGDLIILAARPGMGKTAFMLSIIYNLAKD----EGKPSAVFSLEMSKEQLV 238 Query: 113 MENF 116 M Sbjct: 239 MRLL 242 >3H0K-A nrPDB Length = 178 Score = 28.9 bits (63), Expect = 4.8, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 64 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRR 118 + +L+ G PG+GK+ A + +E G+KV V + YS E K E LM+ +R Sbjct: 1 KVILITGMPGSGKSEFAKLL-KERGAKVIVMSDVVRKRYSIEAKPGERLMDFAKR 54 >2R6A-A nrPDB Length = 454 Score = 28.2 bits (61), Expect = 7.0, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Query: 66 VLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENF 116 +++A P GKTA AL IAQ + +K ++S E+ +++M Sbjct: 206 IIVAARPSVGKTAFALNIAQNVATKTN----ENVAIFSLEMSAQQLVMRML 252 >1KU5-A nrPDB Length = 70 Score = 28.2 bits (61), Expect = 8.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 24/47 (51%), Gaps = 4/47 (8%) Query: 385 NISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVE 431 +SE+A L E + Y++++ A A+ G+ +++ E ++ Sbjct: 23 RVSEQAAKVLAEYLEE----YAIEIAKKAVEFARHAGRKTVKVEDIK 65 >1XZP-A nrPDB Length = 482 Score = 28.2 bits (61), Expect = 8.2, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 4/105 (3%) Query: 43 ENAREACGVIVELIKSKKMAGRAV--LLAGPPGTGKTALALAIAQELGSKVPFCPMVGSE 100 E +E ++ + + R + ++ G P GK+ L + E + V P + Sbjct: 221 ERIKEKLTEELKKADAGILLNRGLRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRD 280 Query: 101 VYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETEN 145 V S EI +L A G+R ET ++ E E T E E Sbjct: 281 VISEEIVIRGILFRIVDTA-GVR-SETNDLVERLGIERTLQEIEK 323 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.306 0.129 0.309 Lambda K H 0.267 0.0393 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,169,420 Number of Sequences: 36641 Number of extensions: 526778 Number of successful extensions: 2251 Number of sequences better than 10.0: 194 Number of HSP's better than 10.0 without gapping: 258 Number of HSP's successfully gapped in prelim test: 85 Number of HSP's that attempted gapping in prelim test: 1802 Number of HSP's gapped (non-prelim): 425 length of query: 456 length of database: 10,336,785 effective HSP length: 100 effective length of query: 356 effective length of database: 6,672,685 effective search space: 2375475860 effective search space used: 2375475860 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.5 bits) S2: 61 (28.2 bits)