BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P58242 (456 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5KAR-A nrPDB 875 0.0 5EBE-A nrPDB 354 6e-98 5FCB-A nrPDB 341 5e-94 5FI9-A nrPDB 181 5e-46 5HQN-A nrPDB 181 6e-46 5I81-A nrPDB 172 2e-43 3C8E-A nrPDB 31 0.89 4OM3-A nrPDB 31 1.3 5C16-A nrPDB 30 1.5 4C50-A nrPDB 30 1.7 3ASJ-A nrPDB 29 3.9 2VCE-A nrPDB 29 5.2 3CQ5-A nrPDB 28 6.1 3DRA-B nrPDB 28 8.1 5CG0-A nrPDB 28 9.2 >5KAR-A nrPDB Length = 427 Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust. Identities = 417/417 (100%), Positives = 417/417 (100%) Query: 19 QLGRFWHISDLHLDPNYTVSKDPLQVCPSAGSQPVLNAGPWGDYLCDSPWALINSSLYAM 78 QLGRFWHISDLHLDPNYTVSKDPLQVCPSAGSQPVLNAGPWGDYLCDSPWALINSSLYAM Sbjct: 11 QLGRFWHISDLHLDPNYTVSKDPLQVCPSAGSQPVLNAGPWGDYLCDSPWALINSSLYAM 70 Query: 79 KEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAALGNHDFH 138 KEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAALGNHDFH Sbjct: 71 KEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAALGNHDFH 130 Query: 139 PKNQFPAQSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRAGRVVVLNTNLYY 198 PKNQFPAQSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRAGRVVVLNTNLYY Sbjct: 131 PKNQFPAQSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRAGRVVVLNTNLYY 190 Query: 199 SNNEQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKTQNKAWFRESFNEE 258 SNNEQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKTQNKAWFRESFNEE Sbjct: 191 SNNEQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKTQNKAWFRESFNEE 250 Query: 259 YLKVIQKHHRVIAGQFFGHHHTDSFRMFYDNTGAPINVMFLTPGVTPWKTTLPGVVDGAN 318 YLKVIQKHHRVIAGQFFGHHHTDSFRMFYDNTGAPINVMFLTPGVTPWKTTLPGVVDGAN Sbjct: 251 YLKVIQKHHRVIAGQFFGHHHTDSFRMFYDNTGAPINVMFLTPGVTPWKTTLPGVVDGAN 310 Query: 319 NPGIRIFEYDRATLNLKDLVTYFLNLRQANVQETPRWEQEYRLTEAYQVPDASVSSMHTA 378 NPGIRIFEYDRATLNLKDLVTYFLNLRQANVQETPRWEQEYRLTEAYQVPDASVSSMHTA Sbjct: 311 NPGIRIFEYDRATLNLKDLVTYFLNLRQANVQETPRWEQEYRLTEAYQVPDASVSSMHTA 370 Query: 379 LTRIASEPHILQRYYVYNSVSYNHLTCEDSCRIEHVCAIQHVAFNTYATCLHGLGAK 435 LTRIASEPHILQRYYVYNSVSYNHLTCEDSCRIEHVCAIQHVAFNTYATCLHGLGAK Sbjct: 371 LTRIASEPHILQRYYVYNSVSYNHLTCEDSCRIEHVCAIQHVAFNTYATCLHGLGAK 427 >5EBE-A nrPDB Length = 418 Score = 354 bits (908), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 171/420 (40%), Positives = 255/420 (60%), Gaps = 10/420 (2%) Query: 20 LGRFWHISDLHLDPNYTVSKDPLQVCPSAGSQPVLNAGPWGDYLCDSPWALINSSLYAMK 79 +G+FWH++DLHLDP Y ++ D +VC S+ N GP+GD LCDSP+ LI S+ +K Sbjct: 5 IGQFWHVTDLHLDPTYHITDDHTKVCASSKGANASNPGPFGDVLCDSPYQLILSAFDFIK 64 Query: 80 EIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAALGNHDFHP 139 + F++WTGD PHVP L V+ ++ +T I+ +FP+ +V+ ALGNHD+ P Sbjct: 65 NSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNHDYWP 124 Query: 140 KNQFPAQSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRAGRVVVLNTNLYYS 199 ++Q P ++++YN VA LW+PWL E+ + ++G FYS+K+ R++ LNTNLYY Sbjct: 125 QDQLPVVTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNL-RIISLNTNLYYG 183 Query: 200 NNEQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKTQNKAWFRESFNEEY 259 N T DP QF WL L+N+ ++ E VY+I HVP G+ +QN RE +NE+ Sbjct: 184 PNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMREYYNEKL 243 Query: 260 LKVIQKHHRVIAGQFFGHHHTDSFRMFYDNTGAPINVMFLTPGVTPWKTTLPGVVDGANN 319 + + QK+ VIAGQF+GH H DS + D G+P+N +F+ P VTP K+ L NN Sbjct: 244 IDIFQKYSDVIAGQFYGHTHRDSIMVLSDKKGSPVNSLFVAPAVTPVKSVLEK---QTNN 300 Query: 320 PGIRIFEYDRATLNLKDLVTYFLNLRQANVQETPRWEQEYRLTEAYQVPDASVSSMH--- 376 PGIR+F+YD L D++ Y+LNL +AN++ W+ EY LT+ Y + D S++ Sbjct: 301 PGIRLFQYDPRDYKLLDMLQYYLNLTEANLKGESIWKLEYILTQTYDIEDLQPESLYGLA 360 Query: 377 TALTRIASEPHILQRYYVYNSVSYN-HLTCEDSCRIEHVCAIQHVAFNTYATCLHGLGAK 435 T + S+ I +YY Y VSY+ +TC+ +C+ +CAI ++ +YA CL L K Sbjct: 361 KQFTILDSKQFI--KYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYADCLKQLYIK 418 >5FCB-A nrPDB Length = 433 Score = 341 bits (874), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 168/425 (39%), Positives = 254/425 (59%), Gaps = 7/425 (1%) Query: 7 LIFLAPWGVAGAQLGRFWHISDLHLDPNYTVSKDPLQVCPSAGSQPVLNAGPWGDYLCDS 66 L+ LAP A A +G+FWH++DLHLDP Y ++ D +VC S+ N GP+GD LCDS Sbjct: 10 LVPLAPADRAPA-VGQFWHVTDLHLDPTYHITDDRTKVCASSKGANASNPGPFGDVLCDS 68 Query: 67 PWALINSSLYAMKEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDT 126 P+ LI S+ +K + F++WTGD PHVP L V+ ++ +T ++ +FP+ Sbjct: 69 PYQLILSAFDFIKNSGQEASFMIWTGDSPPHVPVPELSTGTVIKVITNMTMTVQNLFPNL 128 Query: 127 KVYAALGNHDFHPKNQFPAQSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRA 186 +V+ ALGNHD+ P++Q P ++++Y+ VA+LW+PWL E+ + K+G FYS+K+ + Sbjct: 129 QVFPALGNHDYWPQDQLPIVTSKVYSAVADLWKPWLGEEAISTLKKGGFYSQKV-ASNPG 187 Query: 187 GRVVVLNTNLYYSNNEQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKTQ 246 R++ LNTNLYY N T DP QF WL + L+++ + E VY+I HVP G+ Sbjct: 188 LRIISLNTNLYYGPNIMTLNKTDPANQFEWLENTLNSSLWNKEKVYIIAHVPVGYLPYAT 247 Query: 247 NKAWFRESFNEEYLKVIQKHHRVIAGQFFGHHHTDSFRMFYDNTGAPINVMFLTPGVTPW 306 + R+ +NE+ L + +++ VIAGQF+GH H DS + D G P+N +F+ P VTP Sbjct: 248 DTPAIRQYYNEKLLDIFRRYSSVIAGQFYGHTHRDSLMVLSDKNGNPLNSVFVAPAVTPV 307 Query: 307 KTTLPGVVDGANNPGIRIFEYDRATLNLKDLVTYFLNLRQANVQETPRWEQEYRLTEAYQ 366 K L NNPG+R+F+Y L D+V Y+LNL +AN++ W EY LT+AY Sbjct: 308 KGVLQ---KETNNPGVRLFQYKPGDYTLLDMVQYYLNLTEANLKGESNWTLEYVLTQAYS 364 Query: 367 VPDASVSSMHTALTRIAS-EPHILQRYYVYNSVSYN-HLTCEDSCRIEHVCAIQHVAFNT 424 V D S++ + + A+ + +YY Y VSY+ TC+ C+ VCAI ++ + Sbjct: 365 VADLQPKSLYALVQQFATKDSKQFLKYYHYYFVSYDSSATCDQHCKTLQVCAIMNLDSMS 424 Query: 425 YATCL 429 Y CL Sbjct: 425 YDDCL 429 >5FI9-A nrPDB Length = 538 Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 133/433 (30%), Positives = 198/433 (45%), Gaps = 47/433 (10%) Query: 22 RFWHISDLHLDPNYTVSKDPL---QVCPSAGSQPVLN----AGPWGDY-LCDSPWALINS 73 R ++DLH D Y DP +C GS N AG WG+Y CD P + S Sbjct: 125 RVLFLTDLHWDHEYLEGTDPYCADPLCCRRGSGWPPNSQKGAGFWGEYSKCDLPLRTLES 184 Query: 74 SLYAMKEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAALG 133 L + P + + WTGD H + + + A+ +T+L+++ VY A+G Sbjct: 185 LLKGLGPAGPF-EMVYWTGDIPAHDVWQQSRQDQLRALTT-ITDLVRKFLGPVPVYPAVG 242 Query: 134 NHDFHPKNQFP-------AQSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRA 186 NH+ P N FP S +Y +A+ W PWL ++ + G FY+ P Sbjct: 243 NHESTPVNGFPPPFIKGNQSSQWLYEAMAKAWEPWLPADALHTLRIGGFYALT---PRPG 299 Query: 187 GRVVVLNTNLYYSNN-EQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKT 245 R++ LN N N DP Q +WL + L A G+ V++IGH+PPG K Sbjct: 300 LRLISLNMNFCSRENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGHCLK- 358 Query: 246 QNKAWFRESFNEEYLKVIQKHHRVIAGQFFGHHHTDSFRMFYDNT--GAPINVMFLTPGV 303 S++ Y K+I ++ +AGQFFGH H D F +FYD P+ V FL P Sbjct: 359 --------SWSWNYYKIIARYENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLAPSA 410 Query: 304 TPWKTTLPGVVDGANNPGIRIFEYD----RATLNLKDLVTYFLNLRQANVQ-ETPRWEQE 358 T + NPG R+++ D ++ + D TY LNL QAN TP W++ Sbjct: 411 TTFINL---------NPGYRVYQIDGNYPGSSHVVLDHETYILNLTQANAAGGTPSWKRL 461 Query: 359 YRLTEAYQVPDASVSSMHTALTRIASEPHILQRY-YVYNSVSYNHLTCEDSCRIEHVCAI 417 YR E Y +PDA +S H + R+ + + Q + ++Y+ C CR+ +CA Sbjct: 462 YRARETYGLPDAMPASWHNLVYRMRDDEQLFQTFWFLYHKGHPPSEPCGTPCRLATLCAQ 521 Query: 418 QHVAFNTYATCLH 430 ++ A C H Sbjct: 522 LSARADSPALCRH 534 >5HQN-A nrPDB Length = 473 Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 133/433 (30%), Positives = 198/433 (45%), Gaps = 47/433 (10%) Query: 22 RFWHISDLHLDPNYTVSKDPL---QVCPSAGSQPVLN----AGPWGDY-LCDSPWALINS 73 R ++DLH D Y DP +C GS N AG WG+Y CD P + S Sbjct: 44 RVLFLTDLHWDHEYLEGTDPYCADPLCCRRGSGWPPNSQKGAGFWGEYSKCDLPLRTLES 103 Query: 74 SLYAMKEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAALG 133 L + P + + WTGD H + + + A+ +T+L+++ VY A+G Sbjct: 104 LLKGLGPAGPF-EMVYWTGDIPAHDVWQQSRQDQLRALTT-ITDLVRKFLGPVPVYPAVG 161 Query: 134 NHDFHPKNQFP-------AQSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRA 186 NH+ P N FP S +Y +A+ W PWL ++ + G FY+ P Sbjct: 162 NHESTPVNGFPPPFIKGNQSSQWLYEAMAKAWEPWLPADALHTLRIGGFYALT---PRPG 218 Query: 187 GRVVVLNTNLYYSNN-EQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKT 245 R++ LN N N DP Q +WL + L A G+ V++IGH+PPG K Sbjct: 219 LRLISLNMNFCSRENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGHCLK- 277 Query: 246 QNKAWFRESFNEEYLKVIQKHHRVIAGQFFGHHHTDSFRMFYDNT--GAPINVMFLTPGV 303 S++ Y K+I ++ +AGQFFGH H D F +FYD P+ V FL P Sbjct: 278 --------SWSWNYYKIIARYENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLAPSA 329 Query: 304 TPWKTTLPGVVDGANNPGIRIFEYD----RATLNLKDLVTYFLNLRQANVQ-ETPRWEQE 358 T + NPG R+++ D ++ + D TY LNL QAN TP W++ Sbjct: 330 TTFINL---------NPGYRVYQIDGNYPGSSHVVLDHETYILNLTQANAAGGTPSWKRL 380 Query: 359 YRLTEAYQVPDASVSSMHTALTRIASEPHILQRY-YVYNSVSYNHLTCEDSCRIEHVCAI 417 YR E Y +PDA +S H + R+ + + Q + ++Y+ C CR+ +CA Sbjct: 381 YRARETYGLPDAMPASWHNLVYRMRDDEQLFQTFWFLYHKGHPPSEPCGTPCRLATLCAQ 440 Query: 418 QHVAFNTYATCLH 430 ++ A C H Sbjct: 441 LSARADSPALCRH 453 >5I81-A nrPDB Length = 583 Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 129/433 (29%), Positives = 194/433 (44%), Gaps = 47/433 (10%) Query: 22 RFWHISDLHLDPNYTVSKDPLQVCP-----SAGSQPVL--NAGPWGDY-LCDSPWALINS 73 R ++DLH D +Y DP P +G P AG WG+Y CD P + S Sbjct: 154 RILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLES 213 Query: 74 SLYAMKEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAALG 133 L + P D + WTGD H + + A+ +T L+++ VY A+G Sbjct: 214 LLSGLGPAGPF-DMVYWTGDIPAHDVWHQTRQDQLRALTT-VTALVRKFLGPVPVYPAVG 271 Query: 134 NHDFHPKNQFPA-------QSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRA 186 NH+ P N FP S +Y +A+ W PWL E+ + G FY+ P Sbjct: 272 NHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALS---PYPG 328 Query: 187 GRVVVLNTNLYYSNN-EQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKT 245 R++ LN N N DP Q +WL L A G+ V++IGH+PPG K Sbjct: 329 LRLISLNMNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLK- 387 Query: 246 QNKAWFRESFNEEYLKVIQKHHRVIAGQFFGHHHTDSFRMFYDNT--GAPINVMFLTPGV 303 S++ Y +++ ++ +A QFFGH H D F +FYD P+ V FL P Sbjct: 388 --------SWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAPSA 439 Query: 304 TPWKTTLPGVVDGANNPGIRIFE----YDRATLNLKDLVTYFLNLRQANVQ-ETPRWEQE 358 TT G+ NPG R+++ Y ++ + D TY LNL QAN+ P W+ Sbjct: 440 ----TTYIGL-----NPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLL 490 Query: 359 YRLTEAYQVPDASVSSMHTALTRIASEPHILQRY-YVYNSVSYNHLTCEDSCRIEHVCAI 417 YR E Y +P+ ++ H + R+ + + Q + ++Y+ C CR+ +CA Sbjct: 491 YRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCGTPCRLATLCAQ 550 Query: 418 QHVAFNTYATCLH 430 ++ A C H Sbjct: 551 LSARADSPALCRH 563 >3C8E-A nrPDB Length = 288 Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 23/48 (47%) Query: 308 TTLPGVVDGANNPGIRIFEYDRATLNLKDLVTYFLNLRQANVQETPRW 355 + +P + D +NP IR+FE L L + YFL A ET W Sbjct: 99 SKIPALRDHTHNPPIRVFESGSILLYLAEKFGYFLPQDLAKRTETMNW 146 >4OM3-A nrPDB Length = 147 Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Query: 360 RLTEAYQVPDASVSSMHTALTRIASEPHILQRYYV-YNSVSYN-----HLTCEDSCRIEH 413 R+ E +Q A S+ ++ASE +QR+YV Y +SY H E + R+ Sbjct: 19 RIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHYVMYYEMSYGLNIEMHKQTEIAKRLNT 78 Query: 414 VCA 416 +CA Sbjct: 79 ICA 81 >5C16-A nrPDB Length = 571 Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 6/72 (8%) Query: 105 EAAVLAIVERLTNLIKEVFPDTKVYAALGNHDFHPKNQFPAQSNRIYNQVAELWRPWLSN 164 E + L I E NL K FP + A F K +FP ++Y+ V+E R L N Sbjct: 96 EQSKLGIFE---NLNKHAFPLSNGQALFA---FSYKEKFPINGWKVYDPVSEYKRQGLPN 149 Query: 165 ESYALFKRGAFY 176 ES+ + K + Y Sbjct: 150 ESWKISKINSNY 161 >4C50-A nrPDB Length = 740 Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust. Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 9/78 (11%) Query: 211 GEQFRWLGDVLSNASRDGE---------MVYVIGHVPPGFFEKTQNKAWFRESFNEEYLK 261 G++ WLGD + RD E ++YV P G + RE+F + Sbjct: 199 GKEATWLGDERYSGKRDLENPLAAVQMGLIYVNPEGPNGNPDPMAAAVDIRETFRRMAMN 258 Query: 262 VIQKHHRVIAGQFFGHHH 279 ++ ++ G FG H Sbjct: 259 DVETAALIVGGHTFGKTH 276 >3ASJ-A nrPDB Length = 334 Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust. Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 12/101 (11%) Query: 26 ISDLHLDPNYTVSKDPLQVCPSAGSQPVLNAGPWGDYLCDSPWALINSSLY--------A 77 + L L P+ + P GS P + G + + A++++++ A Sbjct: 238 VGGLGLAPSGNIGDTTAVFEPVHGSAPDI----AGKGIANPTAAILSAAMMLDYLGEKEA 293 Query: 78 MKEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNL 118 K +E D +L G TP + ++ EA A+VE L +L Sbjct: 294 AKRVEKAVDLVLERGPRTPDLGGDATTEAFTEAVVEALKSL 334 >2VCE-A nrPDB Length = 480 Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust. Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 11/58 (18%) Query: 201 NEQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGH--------VPPGFFEKTQNKAW 250 NE G+AD ++F W V+ + S Y H +PPGF E+T+ + + Sbjct: 287 NELALGLADSEQRFLW---VIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGF 341 >3CQ5-A nrPDB Length = 369 Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 8/87 (9%) Query: 46 PSAGSQPVLNAGPWGDYLCDSPWALINSSL-YAMKEIEPK-PDFILWTGDDTPHVPNESL 103 PS P+L G +++ S A + A++EI K PD + T PN Sbjct: 124 PSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVT------TPNNPT 177 Query: 104 GEAAVLAIVERLTNLIKEVFPDTKVYA 130 G+ L VER+ N+ + + YA Sbjct: 178 GDVTSLDDVERIINVAPGIVIVDEAYA 204 >3DRA-B nrPDB Length = 390 Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust. Identities = 17/61 (27%), Positives = 28/61 (45%) Query: 23 FWHISDLHLDPNYTVSKDPLQVCPSAGSQPVLNAGPWGDYLCDSPWALINSSLYAMKEIE 82 F + DL+ +Y ++K Q+ G P P YL + +L N +A++EI Sbjct: 312 FIKLVDLNKAEDYLLNKTQNQLFGGFGRDPDSTPDPMHSYLALASLSLWNHEKFALQEIN 371 Query: 83 P 83 P Sbjct: 372 P 372 >5CG0-A nrPDB Length = 489 Score = 28.1 bits (61), Expect = 9.2, Method: Compositional matrix adjust. Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Query: 40 DPLQVC----PSAGSQPVLNAGPWGDYLCDSPWALINSSLYAMKEIEPKP 85 +P ++C SA P+LNA G YLC ++ Y + + E +P Sbjct: 167 EPREICFEGYGSATKAPILNATAMGAYLCAKNLVTAHAKAYYLYDREFRP 216 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5KAR-A nrPDB 675 0.0 5FCB-A nrPDB 665 0.0 5EBE-A nrPDB 655 0.0 5FI9-A nrPDB 585 e-167 5HQN-A nrPDB 574 e-164 5I81-A nrPDB 574 e-164 Sequences not found previously or not previously below threshold: 2NXF-A nrPDB 37 0.024 2NV5-A nrPDB 36 0.050 4CRV-B nrPDB 35 0.060 4B60-A nrPDB 33 0.24 1LAR-A nrPDB 33 0.24 3SOH-A nrPDB 33 0.34 1W3H-A nrPDB 32 0.41 4BPC-A nrPDB 32 0.51 4C3X-A nrPDB 31 1.2 2ILV-A nrPDB 30 2.5 2OYK-A nrPDB 30 2.8 4HOX-A nrPDB 29 3.1 1CP9-B nrPDB 29 4.8 CONVERGED! >5KAR-A nrPDB Length = 427 Score = 675 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 417/417 (100%), Positives = 417/417 (100%) Query: 19 QLGRFWHISDLHLDPNYTVSKDPLQVCPSAGSQPVLNAGPWGDYLCDSPWALINSSLYAM 78 QLGRFWHISDLHLDPNYTVSKDPLQVCPSAGSQPVLNAGPWGDYLCDSPWALINSSLYAM Sbjct: 11 QLGRFWHISDLHLDPNYTVSKDPLQVCPSAGSQPVLNAGPWGDYLCDSPWALINSSLYAM 70 Query: 79 KEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAALGNHDFH 138 KEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAALGNHDFH Sbjct: 71 KEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAALGNHDFH 130 Query: 139 PKNQFPAQSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRAGRVVVLNTNLYY 198 PKNQFPAQSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRAGRVVVLNTNLYY Sbjct: 131 PKNQFPAQSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRAGRVVVLNTNLYY 190 Query: 199 SNNEQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKTQNKAWFRESFNEE 258 SNNEQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKTQNKAWFRESFNEE Sbjct: 191 SNNEQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKTQNKAWFRESFNEE 250 Query: 259 YLKVIQKHHRVIAGQFFGHHHTDSFRMFYDNTGAPINVMFLTPGVTPWKTTLPGVVDGAN 318 YLKVIQKHHRVIAGQFFGHHHTDSFRMFYDNTGAPINVMFLTPGVTPWKTTLPGVVDGAN Sbjct: 251 YLKVIQKHHRVIAGQFFGHHHTDSFRMFYDNTGAPINVMFLTPGVTPWKTTLPGVVDGAN 310 Query: 319 NPGIRIFEYDRATLNLKDLVTYFLNLRQANVQETPRWEQEYRLTEAYQVPDASVSSMHTA 378 NPGIRIFEYDRATLNLKDLVTYFLNLRQANVQETPRWEQEYRLTEAYQVPDASVSSMHTA Sbjct: 311 NPGIRIFEYDRATLNLKDLVTYFLNLRQANVQETPRWEQEYRLTEAYQVPDASVSSMHTA 370 Query: 379 LTRIASEPHILQRYYVYNSVSYNHLTCEDSCRIEHVCAIQHVAFNTYATCLHGLGAK 435 LTRIASEPHILQRYYVYNSVSYNHLTCEDSCRIEHVCAIQHVAFNTYATCLHGLGAK Sbjct: 371 LTRIASEPHILQRYYVYNSVSYNHLTCEDSCRIEHVCAIQHVAFNTYATCLHGLGAK 427 >5FCB-A nrPDB Length = 433 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 168/427 (39%), Positives = 254/427 (59%), Gaps = 7/427 (1%) Query: 7 LIFLAPWGVAGAQLGRFWHISDLHLDPNYTVSKDPLQVCPSAGSQPVLNAGPWGDYLCDS 66 L+ LAP A A +G+FWH++DLHLDP Y ++ D +VC S+ N GP+GD LCDS Sbjct: 10 LVPLAPADRAPA-VGQFWHVTDLHLDPTYHITDDRTKVCASSKGANASNPGPFGDVLCDS 68 Query: 67 PWALINSSLYAMKEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDT 126 P+ LI S+ +K + F++WTGD PHVP L V+ ++ +T ++ +FP+ Sbjct: 69 PYQLILSAFDFIKNSGQEASFMIWTGDSPPHVPVPELSTGTVIKVITNMTMTVQNLFPNL 128 Query: 127 KVYAALGNHDFHPKNQFPAQSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRA 186 +V+ ALGNHD+ P++Q P ++++Y+ VA+LW+PWL E+ + K+G FYS+K+ + Sbjct: 129 QVFPALGNHDYWPQDQLPIVTSKVYSAVADLWKPWLGEEAISTLKKGGFYSQKV-ASNPG 187 Query: 187 GRVVVLNTNLYYSNNEQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKTQ 246 R++ LNTNLYY N T DP QF WL + L+++ + E VY+I HVP G+ Sbjct: 188 LRIISLNTNLYYGPNIMTLNKTDPANQFEWLENTLNSSLWNKEKVYIIAHVPVGYLPYAT 247 Query: 247 NKAWFRESFNEEYLKVIQKHHRVIAGQFFGHHHTDSFRMFYDNTGAPINVMFLTPGVTPW 306 + R+ +NE+ L + +++ VIAGQF+GH H DS + D G P+N +F+ P VTP Sbjct: 248 DTPAIRQYYNEKLLDIFRRYSSVIAGQFYGHTHRDSLMVLSDKNGNPLNSVFVAPAVTPV 307 Query: 307 KTTLPGVVDGANNPGIRIFEYDRATLNLKDLVTYFLNLRQANVQETPRWEQEYRLTEAYQ 366 K L NNPG+R+F+Y L D+V Y+LNL +AN++ W EY LT+AY Sbjct: 308 KGVLQ---KETNNPGVRLFQYKPGDYTLLDMVQYYLNLTEANLKGESNWTLEYVLTQAYS 364 Query: 367 VPDASVSSMHTALTRIAS-EPHILQRYYVYNSVSYN-HLTCEDSCRIEHVCAIQHVAFNT 424 V D S++ + + A+ + +YY Y VSY+ TC+ C+ VCAI ++ + Sbjct: 365 VADLQPKSLYALVQQFATKDSKQFLKYYHYYFVSYDSSATCDQHCKTLQVCAIMNLDSMS 424 Query: 425 YATCLHG 431 Y CL Sbjct: 425 YDDCLKQ 431 >5EBE-A nrPDB Length = 418 Score = 655 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 168/421 (39%), Positives = 252/421 (59%), Gaps = 6/421 (1%) Query: 17 GAQLGRFWHISDLHLDPNYTVSKDPLQVCPSAGSQPVLNAGPWGDYLCDSPWALINSSLY 76 +G+FWH++DLHLDP Y ++ D +VC S+ N GP+GD LCDSP+ LI S+ Sbjct: 2 PPAIGQFWHVTDLHLDPTYHITDDHTKVCASSKGANASNPGPFGDVLCDSPYQLILSAFD 61 Query: 77 AMKEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAALGNHD 136 +K + F++WTGD PHVP L V+ ++ +T I+ +FP+ +V+ ALGNHD Sbjct: 62 FIKNSGQEASFMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNHD 121 Query: 137 FHPKNQFPAQSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRAGRVVVLNTNL 196 + P++Q P ++++YN VA LW+PWL E+ + ++G FYS+K+ R++ LNTNL Sbjct: 122 YWPQDQLPVVTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPN-LRIISLNTNL 180 Query: 197 YYSNNEQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKTQNKAWFRESFN 256 YY N T DP QF WL L+N+ ++ E VY+I HVP G+ +QN RE +N Sbjct: 181 YYGPNIMTLNKTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMREYYN 240 Query: 257 EEYLKVIQKHHRVIAGQFFGHHHTDSFRMFYDNTGAPINVMFLTPGVTPWKTTLPGVVDG 316 E+ + + QK+ VIAGQF+GH H DS + D G+P+N +F+ P VTP K+ L Sbjct: 241 EKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKKGSPVNSLFVAPAVTPVKSVLE---KQ 297 Query: 317 ANNPGIRIFEYDRATLNLKDLVTYFLNLRQANVQETPRWEQEYRLTEAYQVPDASVSSMH 376 NNPGIR+F+YD L D++ Y+LNL +AN++ W+ EY LT+ Y + D S++ Sbjct: 298 TNNPGIRLFQYDPRDYKLLDMLQYYLNLTEANLKGESIWKLEYILTQTYDIEDLQPESLY 357 Query: 377 TALTRIAS-EPHILQRYYVYNSVSYN-HLTCEDSCRIEHVCAIQHVAFNTYATCLHGLGA 434 + + +YY Y VSY+ +TC+ +C+ +CAI ++ +YA CL L Sbjct: 358 GLAKQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYADCLKQLYI 417 Query: 435 K 435 K Sbjct: 418 K 418 >5FI9-A nrPDB Length = 538 Score = 585 bits (1509), Expect = e-167, Method: Composition-based stats. Identities = 133/433 (30%), Positives = 198/433 (45%), Gaps = 47/433 (10%) Query: 22 RFWHISDLHLDPNYTVSKDPLQ---VCPSAGSQPVLN----AGPWGDY-LCDSPWALINS 73 R ++DLH D Y DP +C GS N AG WG+Y CD P + S Sbjct: 125 RVLFLTDLHWDHEYLEGTDPYCADPLCCRRGSGWPPNSQKGAGFWGEYSKCDLPLRTLES 184 Query: 74 SLYAMKEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAALG 133 L + P + + WTGD H + + + A+ +T+L+++ VY A+G Sbjct: 185 LLKGLGPAGPF-EMVYWTGDIPAHDVWQQSRQDQLRALTT-ITDLVRKFLGPVPVYPAVG 242 Query: 134 NHDFHPKNQFPA-------QSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRA 186 NH+ P N FP S +Y +A+ W PWL ++ + G FY+ P Sbjct: 243 NHESTPVNGFPPPFIKGNQSSQWLYEAMAKAWEPWLPADALHTLRIGGFYALT---PRPG 299 Query: 187 GRVVVLNTNLYYSNN-EQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKT 245 R++ LN N N DP Q +WL + L A G+ V++IGH+PPG K Sbjct: 300 LRLISLNMNFCSRENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGHCLK- 358 Query: 246 QNKAWFRESFNEEYLKVIQKHHRVIAGQFFGHHHTDSFRMFYDNT--GAPINVMFLTPGV 303 S++ Y K+I ++ +AGQFFGH H D F +FYD P+ V FL P Sbjct: 359 --------SWSWNYYKIIARYENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLAPSA 410 Query: 304 TPWKTTLPGVVDGANNPGIRIFEYD----RATLNLKDLVTYFLNLRQANVQ-ETPRWEQE 358 T + NPG R+++ D ++ + D TY LNL QAN TP W++ Sbjct: 411 TTFINL---------NPGYRVYQIDGNYPGSSHVVLDHETYILNLTQANAAGGTPSWKRL 461 Query: 359 YRLTEAYQVPDASVSSMHTALTRIASEPHILQRY-YVYNSVSYNHLTCEDSCRIEHVCAI 417 YR E Y +PDA +S H + R+ + + Q + ++Y+ C CR+ +CA Sbjct: 462 YRARETYGLPDAMPASWHNLVYRMRDDEQLFQTFWFLYHKGHPPSEPCGTPCRLATLCAQ 521 Query: 418 QHVAFNTYATCLH 430 ++ A C H Sbjct: 522 LSARADSPALCRH 534 >5HQN-A nrPDB Length = 473 Score = 574 bits (1480), Expect = e-164, Method: Composition-based stats. Identities = 133/433 (30%), Positives = 198/433 (45%), Gaps = 47/433 (10%) Query: 22 RFWHISDLHLDPNYTVSKDPLQ---VCPSAGSQPVLN----AGPWGDY-LCDSPWALINS 73 R ++DLH D Y DP +C GS N AG WG+Y CD P + S Sbjct: 44 RVLFLTDLHWDHEYLEGTDPYCADPLCCRRGSGWPPNSQKGAGFWGEYSKCDLPLRTLES 103 Query: 74 SLYAMKEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAALG 133 L + P + + WTGD H + + + A+ +T+L+++ VY A+G Sbjct: 104 LLKGLGPAGPF-EMVYWTGDIPAHDVWQQSRQDQLRALTT-ITDLVRKFLGPVPVYPAVG 161 Query: 134 NHDFHPKNQFPA-------QSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRA 186 NH+ P N FP S +Y +A+ W PWL ++ + G FY+ P Sbjct: 162 NHESTPVNGFPPPFIKGNQSSQWLYEAMAKAWEPWLPADALHTLRIGGFYALT---PRPG 218 Query: 187 GRVVVLNTNLYYSNN-EQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKT 245 R++ LN N N DP Q +WL + L A G+ V++IGH+PPG K Sbjct: 219 LRLISLNMNFCSRENFWLLINSTDPAGQLQWLVEELQAAENRGDKVHIIGHIPPGHCLK- 277 Query: 246 QNKAWFRESFNEEYLKVIQKHHRVIAGQFFGHHHTDSFRMFYDNT--GAPINVMFLTPGV 303 S++ Y K+I ++ +AGQFFGH H D F +FYD P+ V FL P Sbjct: 278 --------SWSWNYYKIIARYENTLAGQFFGHTHVDEFEIFYDEETLSRPLAVAFLAPSA 329 Query: 304 TPWKTTLPGVVDGANNPGIRIFEYD----RATLNLKDLVTYFLNLRQANVQ-ETPRWEQE 358 T + NPG R+++ D ++ + D TY LNL QAN TP W++ Sbjct: 330 TTFINL---------NPGYRVYQIDGNYPGSSHVVLDHETYILNLTQANAAGGTPSWKRL 380 Query: 359 YRLTEAYQVPDASVSSMHTALTRIASEPHILQRY-YVYNSVSYNHLTCEDSCRIEHVCAI 417 YR E Y +PDA +S H + R+ + + Q + ++Y+ C CR+ +CA Sbjct: 381 YRARETYGLPDAMPASWHNLVYRMRDDEQLFQTFWFLYHKGHPPSEPCGTPCRLATLCAQ 440 Query: 418 QHVAFNTYATCLH 430 ++ A C H Sbjct: 441 LSARADSPALCRH 453 >5I81-A nrPDB Length = 583 Score = 574 bits (1478), Expect = e-164, Method: Composition-based stats. Identities = 127/433 (29%), Positives = 192/433 (44%), Gaps = 47/433 (10%) Query: 22 RFWHISDLHLDPNYTVSKDPLQVCP-----SAGSQPV--LNAGPWGDY-LCDSPWALINS 73 R ++DLH D +Y DP P +G P AG WG+Y CD P + S Sbjct: 154 RILFLTDLHWDHDYLEGTDPDCADPLCCRRGSGLPPASRPGAGYWGEYSKCDLPLRTLES 213 Query: 74 SLYAMKEIEPKPDFILWTGDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVYAALG 133 L + P D + WTGD H + + A+ +T L+++ VY A+G Sbjct: 214 LLSGLGPAGPF-DMVYWTGDIPAHDVWHQTRQDQLRALTT-VTALVRKFLGPVPVYPAVG 271 Query: 134 NHDFHPKNQFPA-------QSNRIYNQVAELWRPWLSNESYALFKRGAFYSEKLPGPSRA 186 NH+ P N FP S +Y +A+ W PWL E+ + G FY+ P Sbjct: 272 NHESTPVNSFPPPFIEGNHSSRWLYEAMAKAWEPWLPAEALRTLRIGGFYALS---PYPG 328 Query: 187 GRVVVLNTNLYYSNN-EQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKT 245 R++ LN N N DP Q +WL L A G+ V++IGH+PPG K Sbjct: 329 LRLISLNMNFCSRENFWLLINSTDPAGQLQWLVGELQAAEDRGDKVHIIGHIPPGHCLK- 387 Query: 246 QNKAWFRESFNEEYLKVIQKHHRVIAGQFFGHHHTDSFRMFYDNT--GAPINVMFLTPGV 303 S++ Y +++ ++ +A QFFGH H D F +FYD P+ V FL P Sbjct: 388 --------SWSWNYYRIVARYENTLAAQFFGHTHVDEFEVFYDEETLSRPLAVAFLAPSA 439 Query: 304 TPWKTTLPGVVDGANNPGIRIFE----YDRATLNLKDLVTYFLNLRQANVQE-TPRWEQE 358 T + NPG R+++ Y ++ + D TY LNL QAN+ P W+ Sbjct: 440 TTYIGL---------NPGYRVYQIDGNYSGSSHVVLDHETYILNLTQANIPGAIPHWQLL 490 Query: 359 YRLTEAYQVPDASVSSMHTALTRIASEPHILQRY-YVYNSVSYNHLTCEDSCRIEHVCAI 417 YR E Y +P+ ++ H + R+ + + Q + ++Y+ C CR+ +CA Sbjct: 491 YRARETYGLPNTLPTAWHNLVYRMRGDMQLFQTFWFLYHKGHPPSEPCGTPCRLATLCAQ 550 Query: 418 QHVAFNTYATCLH 430 ++ A C H Sbjct: 551 LSARADSPALCRH 563 >2NXF-A nrPDB Length = 322 Score = 36.7 bits (83), Expect = 0.024, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 6/69 (8%) Query: 212 EQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKTQNKAWFRESFN-EEYLKVIQKHHRVI 270 +Q +WL VL+ + E V + H+P ++N E L V++ H V+ Sbjct: 204 QQLQWLDAVLTLSDHKQERVLIFSHLPVHPC----AADPICLAWNHEAVLSVLRSHQSVL 259 Query: 271 AGQFFGHHH 279 GH H Sbjct: 260 CF-IAGHDH 267 >2NV5-A nrPDB Length = 299 Score = 35.5 bits (80), Expect = 0.050, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 38/106 (35%), Gaps = 4/106 (3%) Query: 193 NTNLYYSNNEQTAGMADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKTQNKAWFR 252 N NL +S ++ DPG+QF W L VI + Sbjct: 24 NDNLKFSQEYESI---DPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGIPGS 80 Query: 253 ESFNEEYLKVIQKHHRVIAGQ-FFGHHHTDSFRMFYDNTGAPINVM 297 + N Y+ +K + IA Q D +RM ++ A + +M Sbjct: 81 DYVNANYIDGYRKQNAYIATQGSLPETFGDFWRMIWEQRSATVVMM 126 >4CRV-B nrPDB Length = 273 Score = 35.1 bits (79), Expect = 0.060, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 9/120 (7%) Query: 334 LKDLVTYFLNLRQANVQETPRWEQEYRLTEAYQVPDASVSSMHTALTRIASEPHILQRYY 393 + + + + + + ET + VPD + H+ T A I+ Sbjct: 4 MLEREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVN--- 60 Query: 394 VYNSVSYNHLTCEDSCRIEHVCAIQHVAFNTYATCLHGLGAKLVPGFLLILTLLPSLHVL 453 +Y S++ LT S R+ + A+ + T A +P F L P LH + Sbjct: 61 IYPSINPPTLTAHQSNRVCNALALLQCVASHPET-RSAFLAAHIPLF-----LYPFLHTV 114 >4B60-A nrPDB Length = 321 Score = 33.2 bits (74), Expect = 0.24, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 8/73 (10%) Query: 265 KHHRVIAGQFFGHHHTDSFRMFYDNTGAPINVMFLTP------GVTPWKTTLPGVVDGAN 318 K+ I G ++ + + S F +V F+ P VT T + G N Sbjct: 152 KYKDGI-GNYYANLN-GSIETFNKANNRFSHVAFIKPNNGKTTSVTVTGTLMKGSNQNGN 209 Query: 319 NPGIRIFEYDRAT 331 P +RIFEY Sbjct: 210 QPKVRIFEYLGNN 222 >1LAR-A nrPDB Length = 575 Score = 33.2 bits (74), Expect = 0.24, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 23/67 (34%) Query: 207 MADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKTQNKAWFRESFNEEYLKVIQKH 266 DPG+QF W L VI + + + + N Y+ +K Sbjct: 26 SIDPGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQ 85 Query: 267 HRVIAGQ 273 + IA Q Sbjct: 86 NAYIATQ 92 >3SOH-A nrPDB Length = 188 Score = 32.8 bits (73), Expect = 0.34, Method: Composition-based stats. Identities = 8/50 (16%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 92 GDDTPHVPNESLGEAAVLAIVERLTNLIKEVFPDTKVY-AALGNHDFHPK 140 G++ P+ P + + + V + L+ + + D + + ++ N + +P+ Sbjct: 90 GENPPNRPPTEIETSIMRKEVTNMLTLLAQAWSDFQYFIPSIENVETNPQ 139 >1W3H-A nrPDB Length = 359 Score = 32.4 bits (72), Expect = 0.41, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 8/109 (7%) Query: 189 VVVLNTNLYYSNNEQTAGMADPGEQFRWLGDV--LSNASRDGEMVYVIGHVPPGFFEKTQ 246 +V N + N G F + +S A+++G+ V+ GH Q Sbjct: 44 IVRAEFNQITAENIMKMSYMYSGSNFSFTNSDRLVSWAAQNGQTVH--GHTLVWH-PSYQ 100 Query: 247 NKAWFRESFNEEYLKVIQKHHRVIAGQFFGHHHTDSF--RMFYDNTGAP 293 W +S N + + +H +A F G + +D+ P Sbjct: 101 LPNWASDS-NANFRQDFARHIDTVAAHFAGQVKSWDVVNEALFDSADDP 148 >4BPC-A nrPDB Length = 582 Score = 32.0 bits (71), Expect = 0.51, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 32/92 (34%), Gaps = 1/92 (1%) Query: 207 MADPGEQFRWLGDVLSNASRDGEMVYVIGHVPPGFFEKTQNKAWFRESFNEEYLKVIQKH 266 DPG+QF W L VI + + + N Y+ ++ Sbjct: 33 SIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVILQPIEGIMGSDYINANYVDGYRRQ 92 Query: 267 HRVIAGQF-FGHHHTDSFRMFYDNTGAPINVM 297 + IA Q D +RM ++ A I +M Sbjct: 93 NAYIATQGPLPETFGDFWRMVWEQRSATIVMM 124 >4C3X-A nrPDB Length = 530 Score = 30.9 bits (68), Expect = 1.2, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 6/54 (11%) Query: 12 PWGVAGAQLGRFWHISDLHLDPNYTVSKDPLQV--CPSAGSQPVL----NAGPW 59 P + + +F + L +D + +DP CP G GP+ Sbjct: 404 PADALRSTVEKFNDAAKLGVDEEFHRGEDPYDAFFCPPNGGANAALTAIENGPF 457 >2ILV-A nrPDB Length = 400 Score = 29.7 bits (65), Expect = 2.5, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 22/67 (32%), Gaps = 5/67 (7%) Query: 336 DLVTYFLNLRQANV--QETPRWEQEYRLTEAYQVPDASVSSMHTALTRIASEPHILQRYY 393 D V L ++QA T WE + E Y ++ T+ + I Y Sbjct: 226 DEVKQSLEVQQAKFIFTGTTTWEGNTDVREYYAQQQL---NLLNHFTQAEGDLFIGDHYK 282 Query: 394 VYNSVSY 400 +Y Sbjct: 283 IYFKGHP 289 >2OYK-A nrPDB Length = 481 Score = 29.7 bits (65), Expect = 2.8, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 23/64 (35%), Gaps = 1/64 (1%) Query: 14 GVAGAQLGRFWHISDLHLDPNYTVSKDPLQVCPSAG-SQPVLNAGPWGDYLCDSPWALIN 72 G LG F + L +Y AG S + GPWG YL D L+ Sbjct: 334 GDVPIILGEFGLDTTLPGARDYIERVYGTAREMGAGVSYWSSDPGPWGPYLPDGTQTLLV 393 Query: 73 SSLY 76 +L Sbjct: 394 DTLN 397 >4HOX-A nrPDB Length = 559 Score = 29.3 bits (64), Expect = 3.1, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Query: 241 FFEKTQNKAWFRESFNEEYLKVIQKHHRVIAGQFFGHHHTDSFRMFYDNTGAPINVMF 298 F E+ + NE +V+ + AG+ FG D F+D +N+ F Sbjct: 222 FAEEYTKGPKIHDYVNEMNREVLSHYDIATAGEIFG-VPLDKSIKFFDRRRNELNIAF 278 >1CP9-B nrPDB Length = 553 Score = 29.0 bits (63), Expect = 4.8, Method: Composition-based stats. Identities = 14/108 (12%), Positives = 31/108 (28%), Gaps = 17/108 (15%) Query: 89 LWTGDDTPHVPNESLGEAAVLAIVERLTNL------------IKEVFPDT-----KVYAA 131 ++ +P PN L + ++ R L + V + + A Sbjct: 77 IFAEQVSPEDPNSYLHQGQWKKMLSRQETLNVKGEQPITFEIYRTVHGNVVKRDKTTHTA 136 Query: 132 LGNHDFHPKNQFPAQSNRIYNQVAELWRPWLSNESYALFKRGAFYSEK 179 + + + A+ W+ WL +Y++K Sbjct: 137 YSKARAWDGKELTSLMAWVKQGQAQNWQQWLDQAQNQALTINWYYADK 184 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.305 0.127 0.368 Lambda K H 0.267 0.0400 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,612,320 Number of Sequences: 36641 Number of extensions: 749677 Number of successful extensions: 1962 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 1864 Number of HSP's gapped (non-prelim): 42 length of query: 456 length of database: 10,336,785 effective HSP length: 100 effective length of query: 356 effective length of database: 6,672,685 effective search space: 2375475860 effective search space used: 2375475860 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 61 (28.1 bits)