BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P58004
         (480 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

5DJ4-A nrPDB                                                          994   0.0  
2OYO-A nrPDB                                                           46   3e-05
2PRR-A nrPDB                                                           45   1e-04
2PFX-A nrPDB                                                           35   0.10 
3C1L-A nrPDB                                                           32   0.62 
3GDF-A nrPDB                                                           32   0.80 
4MYH-A nrPDB                                                           30   2.8  
4CW5-A nrPDB                                                           29   4.8  
4S3P-A nrPDB                                                           29   5.1  
2ZFD-A nrPDB                                                           28   6.0  
1UHN-A nrPDB                                                           28   8.2  
4DLQ-A nrPDB                                                           28   9.4  

>5DJ4-A nrPDB
          Length = 480

 Score =  994 bits (2570), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/480 (100%), Positives = 480/480 (100%)

Query: 1   MIVADSECRAELKDYLRFAPGGVGDSGPGEEQRESRARRGPRGPSAFIPVEEVLREGAES 60
           MIVADSECRAELKDYLRFAPGGVGDSGPGEEQRESRARRGPRGPSAFIPVEEVLREGAES
Sbjct: 1   MIVADSECRAELKDYLRFAPGGVGDSGPGEEQRESRARRGPRGPSAFIPVEEVLREGAES 60

Query: 61  LEQHLGLEALMSSGRVDNLAVVMGLHPDYFTSFWRLHYLLLHTDGPLASSWRHYIAIMAA 120
           LEQHLGLEALMSSGRVDNLAVVMGLHPDYFTSFWRLHYLLLHTDGPLASSWRHYIAIMAA
Sbjct: 61  LEQHLGLEALMSSGRVDNLAVVMGLHPDYFTSFWRLHYLLLHTDGPLASSWRHYIAIMAA 120

Query: 121 ARHQCSYLVGSHMAEFLQTGGDPEWLLGLHRAPEKLRKLSEINKLLAHRPWLITKEHIQA 180
           ARHQCSYLVGSHMAEFLQTGGDPEWLLGLHRAPEKLRKLSEINKLLAHRPWLITKEHIQA
Sbjct: 121 ARHQCSYLVGSHMAEFLQTGGDPEWLLGLHRAPEKLRKLSEINKLLAHRPWLITKEHIQA 180

Query: 181 LLKTGEHTWSLAELIQALVLLTHCHSLSSFVFGCGILPEGDADGSPAPQAPTPPSEQSSP 240
           LLKTGEHTWSLAELIQALVLLTHCHSLSSFVFGCGILPEGDADGSPAPQAPTPPSEQSSP
Sbjct: 181 LLKTGEHTWSLAELIQALVLLTHCHSLSSFVFGCGILPEGDADGSPAPQAPTPPSEQSSP 240

Query: 241 PSRDPLNNSGGFESARDVEALMERMQQLQESLLRDEGTSQEEMESRFELEKSESLLVTPS 300
           PSRDPLNNSGGFESARDVEALMERMQQLQESLLRDEGTSQEEMESRFELEKSESLLVTPS
Sbjct: 241 PSRDPLNNSGGFESARDVEALMERMQQLQESLLRDEGTSQEEMESRFELEKSESLLVTPS 300

Query: 301 ADILEPSPHPDMLCFVEDPTFGYEDFTRRGAQAPPTFRAQDYTWEDHGYSLIQRLYPEGG 360
           ADILEPSPHPDMLCFVEDPTFGYEDFTRRGAQAPPTFRAQDYTWEDHGYSLIQRLYPEGG
Sbjct: 301 ADILEPSPHPDMLCFVEDPTFGYEDFTRRGAQAPPTFRAQDYTWEDHGYSLIQRLYPEGG 360

Query: 361 QLLDEKFQAAYSLTYNTIAMHSGVDTSVLRRAIWNYIHCVFGIRYDDYDYGEVNQLLERN 420
           QLLDEKFQAAYSLTYNTIAMHSGVDTSVLRRAIWNYIHCVFGIRYDDYDYGEVNQLLERN
Sbjct: 361 QLLDEKFQAAYSLTYNTIAMHSGVDTSVLRRAIWNYIHCVFGIRYDDYDYGEVNQLLERN 420

Query: 421 LKVYIKTVACYPEKTTRRMYNLFWRHFRHSEKVHVNLLLLEARMQAALLYALRAITRYMT 480
           LKVYIKTVACYPEKTTRRMYNLFWRHFRHSEKVHVNLLLLEARMQAALLYALRAITRYMT
Sbjct: 421 LKVYIKTVACYPEKTTRRMYNLFWRHFRHSEKVHVNLLLLEARMQAALLYALRAITRYMT 480


>2OYO-A nrPDB
          Length = 196

 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 9/162 (5%)

Query: 63  QHLGLEALMSSGRVDNLAVVMGLHPDYFTSFWRLHYLLLHTDGPLASSWRHYIAIMAAAR 122
           + L  +A  + G V N+     ++ + F ++W    LLL+ +G L ++ R  +A++ +  
Sbjct: 29  RKLWAKAEANIGFVPNVFRAQAVNGEQFLAWWNYFNLLLNKEGYLTNAERELVAVVVSGV 88

Query: 123 HQCSYLVGSHMAEFLQTGGDPEWLLGL------HRAPEKLRKLSEINKLLAHRPWLITKE 176
           ++C Y   SH A   +  GDP+    +          E+ + L+   + L   P  +T  
Sbjct: 89  NRCLYCAVSHGAALREFLGDPQKADAVAVNWRHADLTEREQALAAYAEKLTRHPAEVTAA 148

Query: 177 HIQALLKTGEHTWSLAELIQALVLLTHCHSLSSFVFGCGILP 218
            ++ L   G     + EL+Q + +    + +SS     G +P
Sbjct: 149 DLEPLRAVGLDDHQIMELVQVIGMFNLTNRVSS---ALGFVP 187


>2PRR-A nrPDB
          Length = 197

 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 2/94 (2%)

Query: 41  PRGPSAFIPVEEVLREGAESLEQHLGLEALMSSGRVDNLAVVMGLHPDYFTSFWRLHYLL 100
           P  P +  PV E L    + + Q + LE    +G V N+ + +   PD F +F+  H  L
Sbjct: 5   PAHPISRYPVPE-LAALPDDIRQRI-LEVQDKAGFVPNVFLTLAHRPDEFRAFFAYHDAL 62

Query: 101 LHTDGPLASSWRHYIAIMAAARHQCSYLVGSHMA 134
           +  DG L    R  I +  +A +QC Y V +H A
Sbjct: 63  MLKDGGLTKGEREMIVVATSAANQCLYCVVAHGA 96


>2PFX-A nrPDB
          Length = 191

 Score = 34.7 bits (78), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 17/71 (23%), Positives = 35/71 (49%)

Query: 74  GRVDNLAVVMGLHPDYFTSFWRLHYLLLHTDGPLASSWRHYIAIMAAARHQCSYLVGSHM 133
           G V N+      + +   +F  ++  L+  +  L+   R  IA++ ++ ++C Y + +H 
Sbjct: 35  GMVPNVLKAYAFNVEKLNAFTAMYNDLMLGESQLSKLEREMIAVVVSSINKCFYCLVAHG 94

Query: 134 AEFLQTGGDPE 144
           A   Q  GDP+
Sbjct: 95  AAVRQLSGDPQ 105


>3C1L-A nrPDB
          Length = 188

 Score = 32.0 bits (71), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 9/128 (7%)

Query: 74  GRVDNLAVVMGLHPDYFTSFWRLHYLLLHTDGPLASSWRHYIAIMAAARHQCSYLVGSHM 133
           G V N+            +F  ++  L+  +  L+   R  IA+  ++ + C Y + +H 
Sbjct: 32  GLVPNVLKAYAFDDKKLRAFTDIYNDLMLGESGLSKLDREMIAVAVSSINHCYYCLTAHG 91

Query: 134 AEFLQTGGDP---EWLLGLHRAPE---KLRKLSEINKLLAHRPWLITKEHIQALLKTG-- 185
           A   Q  GDP   E L+   RA +   +   + E    L   P  I +    AL K G  
Sbjct: 92  AAVRQLSGDPALGEMLVMNFRAADLSPRQTAMLEFAVKLTEEPAKIVEADRAALRKAGFS 151

Query: 186 -EHTWSLA 192
               W +A
Sbjct: 152 DRDIWDIA 159


>3GDF-A nrPDB
          Length = 267

 Score = 31.6 bits (70), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 28/133 (21%), Positives = 46/133 (34%), Gaps = 10/133 (7%)

Query: 12  LKDYLRFAPGGVGDSGPGEEQRESRARRGPRGPSAFIPVEEVLREGAESLEQHLGLEALM 71
           LK  +    G  G  G G E     A  G      +    +   E  + LE+  G++A  
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77

Query: 72  SSGRVDNLAVVMGLHPDYFTSFWRLHYLLLHT---------DGPLASSWRHYIAIMAAAR 122
              +VD+      L  D    F ++   + +          DG +  +W H + +     
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSV-EAWNHVVQVDLNGT 136

Query: 123 HQCSYLVGSHMAE 135
             C+  VG H  E
Sbjct: 137 FHCAKAVGHHFKE 149


>4MYH-A nrPDB
          Length = 598

 Score = 29.6 bits (65), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 271 SLLRDEGTSQEEMESRFELEKSESLLVTPSADILEPSPHPDMLCFVEDPTFGY 323
           S+ RD   S  +ME+ F+L K+E  +      ++ P   P  + F E+ TFGY
Sbjct: 297 SVYRDLKQSLIDMETLFKLRKNEVKIKNAERPLMLPENVPYDITF-ENVTFGY 348


>4CW5-A nrPDB
          Length = 454

 Score = 28.9 bits (63), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 292 SESLLVTPSADILEPSPHPDMLCFVEDPTFGYEDFTRRGAQAPPTFRAQDYTWEDHGYSL 351
           S++ L    A + +  P  D +C VE  + G+ D        P   R +D   E HGY+ 
Sbjct: 173 SDNRLTAGEAALAKEIPMADDIC-VEADSGGHTDQGIPYTLMPAMIRLRDRMMEKHGYAK 231

Query: 352 IQRLYPEGG 360
             R+   GG
Sbjct: 232 KVRIGAAGG 240


>4S3P-A nrPDB
          Length = 696

 Score = 28.9 bits (63), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 3/80 (3%)

Query: 71  MSSGRVDNLAVVMGLHPDYFTSFWRLHYLLLHTDGPLASSWRHYIAIMAAAR---HQCSY 127
           M S R+DN A+  G+ P+Y  +  +   +   T   L  +     A   A     +   Y
Sbjct: 1   MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQRTATKVAVTPVPNVMVY 60

Query: 128 LVGSHMAEFLQTGGDPEWLL 147
             G  M   ++  G+  WLL
Sbjct: 61  TSGKKMPMVVEGSGEYSWLL 80


>2ZFD-A nrPDB
          Length = 226

 Score = 28.5 bits (62), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 10/76 (13%)

Query: 254 SARDVEALMERMQQLQESLLRDEGTSQEEME-SRFELEKSESLLVTPSADILEPSPHPDM 312
           S  ++EAL E  +++  +++ D   ++EE + + F+  K ESL      D+ + + H  +
Sbjct: 43  SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFD-TKHNGI 101

Query: 313 LCFVEDPTFGYEDFTR 328
           L        G+E+F R
Sbjct: 102 L--------GFEEFAR 109


>1UHN-A nrPDB
          Length = 189

 Score = 28.1 bits (61), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 10/76 (13%)

Query: 254 SARDVEALMERMQQLQESLLRDEGTSQEEME-SRFELEKSESLLVTPSADILEPSPHPDM 312
           S  ++EAL E  +++  +++ D   ++EE + + F+  K ESL      D+ + + H  +
Sbjct: 12  SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFD-TKHNGI 70

Query: 313 LCFVEDPTFGYEDFTR 328
           L        G+E+F R
Sbjct: 71  L--------GFEEFAR 78


>4DLQ-A nrPDB
          Length = 381

 Score = 28.1 bits (61), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 418 ERNLKVYIKTVACYPEKTTRRMYNLFWRHFRHSEKVHVNLLLLEARMQAALLYA--LRAI 475
           ER  K YIK V    +   R      W+    +E+VH   +LL+   + A L A  +R  
Sbjct: 154 ERTCKDYIKAVVETVDNLLRPEALESWKDMNATEQVHTATMLLDVLEEGAFLLADNVREP 213

Query: 476 TRYM 479
            R++
Sbjct: 214 ARFL 217


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

5DJ4-A nrPDB                                                          950   0.0  
2OYO-A nrPDB                                                          239   2e-63
2PRR-A nrPDB                                                          173   1e-43

Sequences not found previously or not previously below threshold:

2PFX-A nrPDB                                                          112   3e-25
3C1L-A nrPDB                                                          104   7e-23
3LVY-A nrPDB                                                           52   8e-07
2OUW-A nrPDB                                                           51   9e-07
2O4D-A nrPDB                                                           44   1e-04
2IJC-A nrPDB                                                           44   1e-04
2GMY-A nrPDB                                                           38   0.011
5DIP-A nrPDB                                                           32   0.50 
2JE5-A nrPDB                                                           32   0.57 
6OHJ-A nrPDB                                                           31   1.2  
1GU9-A nrPDB                                                           31   1.5  
2ZFD-A nrPDB                                                           30   2.2  
1UHN-A nrPDB                                                           30   2.2  
1WDE-A nrPDB                                                           29   4.2  
4CW5-A nrPDB                                                           28   9.7  

>5DJ4-A nrPDB
          Length = 480

 Score =  950 bits (2456), Expect = 0.0,   Method: Composition-based stats.
 Identities = 480/480 (100%), Positives = 480/480 (100%)

Query: 1   MIVADSECRAELKDYLRFAPGGVGDSGPGEEQRESRARRGPRGPSAFIPVEEVLREGAES 60
           MIVADSECRAELKDYLRFAPGGVGDSGPGEEQRESRARRGPRGPSAFIPVEEVLREGAES
Sbjct: 1   MIVADSECRAELKDYLRFAPGGVGDSGPGEEQRESRARRGPRGPSAFIPVEEVLREGAES 60

Query: 61  LEQHLGLEALMSSGRVDNLAVVMGLHPDYFTSFWRLHYLLLHTDGPLASSWRHYIAIMAA 120
           LEQHLGLEALMSSGRVDNLAVVMGLHPDYFTSFWRLHYLLLHTDGPLASSWRHYIAIMAA
Sbjct: 61  LEQHLGLEALMSSGRVDNLAVVMGLHPDYFTSFWRLHYLLLHTDGPLASSWRHYIAIMAA 120

Query: 121 ARHQCSYLVGSHMAEFLQTGGDPEWLLGLHRAPEKLRKLSEINKLLAHRPWLITKEHIQA 180
           ARHQCSYLVGSHMAEFLQTGGDPEWLLGLHRAPEKLRKLSEINKLLAHRPWLITKEHIQA
Sbjct: 121 ARHQCSYLVGSHMAEFLQTGGDPEWLLGLHRAPEKLRKLSEINKLLAHRPWLITKEHIQA 180

Query: 181 LLKTGEHTWSLAELIQALVLLTHCHSLSSFVFGCGILPEGDADGSPAPQAPTPPSEQSSP 240
           LLKTGEHTWSLAELIQALVLLTHCHSLSSFVFGCGILPEGDADGSPAPQAPTPPSEQSSP
Sbjct: 181 LLKTGEHTWSLAELIQALVLLTHCHSLSSFVFGCGILPEGDADGSPAPQAPTPPSEQSSP 240

Query: 241 PSRDPLNNSGGFESARDVEALMERMQQLQESLLRDEGTSQEEMESRFELEKSESLLVTPS 300
           PSRDPLNNSGGFESARDVEALMERMQQLQESLLRDEGTSQEEMESRFELEKSESLLVTPS
Sbjct: 241 PSRDPLNNSGGFESARDVEALMERMQQLQESLLRDEGTSQEEMESRFELEKSESLLVTPS 300

Query: 301 ADILEPSPHPDMLCFVEDPTFGYEDFTRRGAQAPPTFRAQDYTWEDHGYSLIQRLYPEGG 360
           ADILEPSPHPDMLCFVEDPTFGYEDFTRRGAQAPPTFRAQDYTWEDHGYSLIQRLYPEGG
Sbjct: 301 ADILEPSPHPDMLCFVEDPTFGYEDFTRRGAQAPPTFRAQDYTWEDHGYSLIQRLYPEGG 360

Query: 361 QLLDEKFQAAYSLTYNTIAMHSGVDTSVLRRAIWNYIHCVFGIRYDDYDYGEVNQLLERN 420
           QLLDEKFQAAYSLTYNTIAMHSGVDTSVLRRAIWNYIHCVFGIRYDDYDYGEVNQLLERN
Sbjct: 361 QLLDEKFQAAYSLTYNTIAMHSGVDTSVLRRAIWNYIHCVFGIRYDDYDYGEVNQLLERN 420

Query: 421 LKVYIKTVACYPEKTTRRMYNLFWRHFRHSEKVHVNLLLLEARMQAALLYALRAITRYMT 480
           LKVYIKTVACYPEKTTRRMYNLFWRHFRHSEKVHVNLLLLEARMQAALLYALRAITRYMT
Sbjct: 421 LKVYIKTVACYPEKTTRRMYNLFWRHFRHSEKVHVNLLLLEARMQAALLYALRAITRYMT 480


>2OYO-A nrPDB
          Length = 196

 Score =  239 bits (610), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 79/180 (43%), Gaps = 11/180 (6%)

Query: 45  SAFIPVEEVLREGAESLEQHLGLEALMSSGRVDNLAVVMGLHPDYFTSFWRLHYLLLHTD 104
            + +PV +   +  E +   L  +A  + G V N+     ++ + F ++W    LLL+ +
Sbjct: 13  ISSLPVPDA-TQVPEGVR-KLWAKAEANIGFVPNVFRAQAVNGEQFLAWWNYFNLLLNKE 70

Query: 105 GPLASSWRHYIAIMAAARHQCSYLVGSHMAEFLQTGGDPEWLLGL------HRAPEKLRK 158
           G L ++ R  +A++ +  ++C Y   SH A   +  GDP+    +          E+ + 
Sbjct: 71  GYLTNAERELVAVVVSGVNRCLYCAVSHGAALREFLGDPQKADAVAVNWRHADLTEREQA 130

Query: 159 LSEINKLLAHRPWLITKEHIQALLKTGEHTWSLAELIQALVLLTHCHSLSSFVFGCGILP 218
           L+   + L   P  +T   ++ L   G     + EL+Q + +    + +SS     G +P
Sbjct: 131 LAAYAEKLTRHPAEVTAADLEPLRAVGLDDHQIMELVQVIGMFNLTNRVSS---ALGFVP 187


>2PRR-A nrPDB
          Length = 197

 Score =  173 bits (439), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 8/177 (4%)

Query: 41  PRGPSAFIPVEEVLREGAESLEQHLGLEALMSSGRVDNLAVVMGLHPDYFTSFWRLHYLL 100
           P  P +  PV E L    + + Q + LE    +G V N+ + +   PD F +F+  H  L
Sbjct: 5   PAHPISRYPVPE-LAALPDDIRQRI-LEVQDKAGFVPNVFLTLAHRPDEFRAFFAYHDAL 62

Query: 101 LHTDGPLASSWRHYIAIMAAARHQCSYLVGSHMAEFLQTGGDPEWLLGL------HRAPE 154
           +  DG L    R  I +  +A +QC Y V +H A        P     +         P 
Sbjct: 63  MLKDGGLTKGEREMIVVATSAANQCLYCVVAHGAILRIYEKKPLVADQVAVNYLKADIPP 122

Query: 155 KLRKLSEINKLLAHRPWLITKEHIQALLKTGEHTWSLAELIQALVLLTHCHSLSSFV 211
           + R + +    +      + +   +AL + G       ++          + +++ +
Sbjct: 123 RQRAMLDFALKVCKASHEVNEADFEALREHGFTDEDAWDIAAITAFFGLSNRMANTI 179


>2PFX-A nrPDB
          Length = 191

 Score =  112 bits (280), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 74/191 (38%), Gaps = 14/191 (7%)

Query: 41  PRGPSAF-IPVEEVLREGAESLEQHLGLEALMSSGRVDNLAVVMGLHPDYFTSFWRLHYL 99
           P+ P+A  +P+ + L    +  +++  +      G V N+      + +   +F  ++  
Sbjct: 5   PKEPTALDLPMADPL---PDETQKYFEI-CQEKLGMVPNVLKAYAFNVEKLNAFTAMYND 60

Query: 100 LLHTDGPLASSWRHYIAIMAAARHQCSYLVGSHMAEFLQTGGDPEWLLGL------HRAP 153
           L+  +  L+   R  IA++ ++ ++C Y + +H A   Q  GDP+    L          
Sbjct: 61  LMLGESQLSKLEREMIAVVVSSINKCFYCLVAHGAAVRQLSGDPQLGEMLVMNYRVAPLD 120

Query: 154 EKLRKLSEINKLLAHRPWLITKEHIQALLKTGEHTWSLAELIQALVLLTHCHSLSSFVFG 213
            + R + +    +      I +   + L   G +   + ++          + ++S    
Sbjct: 121 ARQRVMLDFAAKMTRASAEIEEADREVLRSHGFNDRDIWDIANVTGFFNMTNRVAS---A 177

Query: 214 CGILPEGDADG 224
             ++P  +  G
Sbjct: 178 TAMMPNAEYHG 188


>3C1L-A nrPDB
          Length = 188

 Score =  104 bits (260), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 51/151 (33%), Gaps = 6/151 (3%)

Query: 67  LEALMSSGRVDNLAVVMGLHPDYFTSFWRLHYLLLHTDGPLASSWRHYIAIMAAARHQCS 126
            +     G V N+            +F  ++  L+  +  L+   R  IA+  ++ + C 
Sbjct: 25  AKCEEKLGLVPNVLKAYAFDDKKLRAFTDIYNDLMLGESGLSKLDREMIAVAVSSINHCY 84

Query: 127 YLVGSHMAEFLQTGGDPEWLLGL------HRAPEKLRKLSEINKLLAHRPWLITKEHIQA 180
           Y + +H A   Q  GDP     L           +   + E    L   P  I +    A
Sbjct: 85  YCLTAHGAAVRQLSGDPALGEMLVMNFRAADLSPRQTAMLEFAVKLTEEPAKIVEADRAA 144

Query: 181 LLKTGEHTWSLAELIQALVLLTHCHSLSSFV 211
           L K G     + ++          + +++ +
Sbjct: 145 LRKAGFSDRDIWDIASTAAFFNMSNRVAAAI 175


>3LVY-A nrPDB
          Length = 207

 Score = 51.6 bits (122), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 60/159 (37%), Gaps = 8/159 (5%)

Query: 53  VLREGAESLEQHLGLEALMSSGRVDNLAVVMGLHPDYFTSFWRLHYLLLHTDGPLASSWR 112
            +    E +++ L      + G + NL  ++   P    ++  +    ++    L  + R
Sbjct: 30  TIETAPERVKETLRTVKKDNGGYIPNLIGLLANAPTALETYRTVGE--INRRNSLTPTER 87

Query: 113 HYIAIMAAARHQCSYLVGSHMA-EFLQTGGDPEWLLGLHRAP-----EKLRKLSEINKLL 166
             + I AA  + C++ V  H A    Q    P+ L  L  A       KL  L++    +
Sbjct: 88  EVVQITAAVTNGCAFCVAGHTAFSIKQIQMAPDLLEALRNATPIDDDPKLDTLAKFTIAV 147

Query: 167 AHRPWLITKEHIQALLKTGEHTWSLAELIQALVLLTHCH 205
            +    +  E     L+ G    +  +++  + L + C+
Sbjct: 148 INTKGRVGDEAFADFLEVGYTPENALDVVLGVSLASLCN 186


>2OUW-A nrPDB
          Length = 138

 Score = 51.2 bits (121), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 7/94 (7%)

Query: 50  VEEVLREGAESLEQHLGLEALMSSGRVDNLAVVMGLHPDYFTSFWRLHYLLLHTDGPLAS 109
           + EV +   + +       A   S  V+N+   +   P      W     ++  +G L  
Sbjct: 16  LPEV-KAVFDDIR------ATRGSDFVNNIWRGLANDPALLKRTWEQVKTVMVGEGALDP 68

Query: 110 SWRHYIAIMAAARHQCSYLVGSHMAEFLQTGGDP 143
             R  I +  +  + CSY   SH A     G  P
Sbjct: 69  LTREMIYLAVSTANSCSYCAHSHTAAARAKGMTP 102


>2O4D-A nrPDB
          Length = 165

 Score = 44.3 bits (103), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 45/139 (32%), Gaps = 11/139 (7%)

Query: 87  PDYFTSFWRLHYLLLHTDGPLASSWRHYIAIMAAARHQCSYLVGSHMAEFLQTGGDPEWL 146
           PD + +   L   L      L       + +  +  + C+Y V  H  +  + G   + L
Sbjct: 32  PDAYAAMLGLEKAL--AKAGLERPLIELVYLRTSQINGCAYCVNMHANDARKAGETEQRL 89

Query: 147 LGLHRAPE------KLRKLSEINKLLAHRPWLITKEHIQALLKTGEHTWSLAELIQALVL 200
             L    E      + R      + LA          +   L+       +AEL  A+  
Sbjct: 90  QALCVWQETPYFTPRERAALAWTEQLARLSQGALPHGLLDELREHFDDKEIAELTLAVSA 149

Query: 201 LTHCHSLSSFVFGCGILPE 219
           +   +    F  G G+ PE
Sbjct: 150 INAWNR---FGVGMGMQPE 165


>2IJC-A nrPDB
          Length = 145

 Score = 43.9 bits (102), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 45/139 (32%), Gaps = 11/139 (7%)

Query: 87  PDYFTSFWRLHYLLLHTDGPLASSWRHYIAIMAAARHQCSYLVGSHMAEFLQTGGDPEWL 146
           PD + +   L   L      L       + +  +  + C+Y V  H  +  + G   + L
Sbjct: 12  PDAYAAMLGLEKAL--AKAGLERPLIELVYLRTSQINGCAYCVNMHANDARKAGETEQRL 69

Query: 147 LGLHRAPE------KLRKLSEINKLLAHRPWLITKEHIQALLKTGEHTWSLAELIQALVL 200
             L    E      + R      + LA          +   L+       +AEL  A+  
Sbjct: 70  QALCVWQETPYFTPRERAALAWTEQLARLSQGALPHGLLDELREHFDDKEIAELTLAVSA 129

Query: 201 LTHCHSLSSFVFGCGILPE 219
           +   +    F  G G+ PE
Sbjct: 130 INAWNR---FGVGMGMQPE 145


>2GMY-A nrPDB
          Length = 153

 Score = 37.7 bits (86), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 45/128 (35%), Gaps = 8/128 (6%)

Query: 87  PDYFTSFWRLHYLLLHTDGPLASSWRHYIAIMAAARHQCSYLVGSHMAEFLQTGGDPEW- 145
           P+ F +   L   +      L   + H I + A+  + C++ V  H+ E    G   +W 
Sbjct: 12  PEAFKAVMALENYV--QSSGLEHRFIHLIKLRASIINGCAFCVDMHVKESRHDGLSEQWI 69

Query: 146 -LLGLHR----APEKLRKLSEINKLLAHRPWLITKEHIQALLKTGEHTWSLAELIQALVL 200
            L+ + R      E+ R L      +         +     L+       + ++  A+  
Sbjct: 70  NLMSVWRESPVYTEQERALLGWVDAVTKIAETGAPDDAFETLRAHFSDEEIVKITVAIGA 129

Query: 201 LTHCHSLS 208
           +   + ++
Sbjct: 130 INTWNRIA 137


>5DIP-A nrPDB
          Length = 121

 Score = 32.4 bits (72), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 87  PDYFTSFWRLHYLLLHTDGPLASSWRHYIAIMAAARHQCSYLVGSHMAEFLQTGGDPEWL 146
           P+  T F  L       DG L    +  IA+  A   QC   +G H    ++     E L
Sbjct: 32  PELMTGFSSLAQA-ATKDGALDKKTKELIAMALAVAKQCPGCIGFHSQTLVKLQATREEL 90

Query: 147 L 147
           L
Sbjct: 91  L 91


>2JE5-A nrPDB
          Length = 720

 Score = 32.0 bits (71), Expect = 0.57,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 2/83 (2%)

Query: 221 DADGSPAPQAPTPPSEQSSPPSRDPLNNSGGFESARDVEALMERMQQLQESLLRDEGTSQ 280
           DA     PQA        SP +  P  N+G  +S  D+E  + R + +  S+ R    S+
Sbjct: 180 DASQLTVPQAAFLAGLPQSPITYSPYENTGELKSDEDLEIGLRRAKAVLYSMYRTGALSK 239

Query: 281 EEMESRFELEKSESLLVTPSADI 303
           +E     + +  +  L  PS  +
Sbjct: 240 DEYSQYKDYDLKQDFL--PSGTV 260


>6OHJ-A nrPDB
          Length = 195

 Score = 31.2 bits (69), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 38/119 (31%), Gaps = 9/119 (7%)

Query: 70  LMSSGRVDNLAVVMGLHPDYFTSFWRLHYLL-LHTDGPLASSWRHYIAIMAAARHQCSYL 128
             + G + N  + MG +PD   +F  L   +      P    W   IA+++++     Y 
Sbjct: 31  EQNLGFLPNGILTMGKNPDLAVAFGGLFKCIDAFKHIPTELKW--AIAMISSSAAGAMYC 88

Query: 129 VGSHMAEFLQTGGDPEWLLGLHRA------PEKLRKLSEINKLLAHRPWLITKEHIQAL 181
                    +T  +   ++            E  R         +  P  + KEH   L
Sbjct: 89  KSHFSHIATRTHVNRNKVMAAFEFQTSDFYNEAERAALAFAFANSTSPAHLDKEHFDEL 147


>1GU9-A nrPDB
          Length = 177

 Score = 30.8 bits (68), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 3/62 (4%)

Query: 106 PLASSWRHYIAIMAAARHQCSYLVGSHMAEFLQTGGDPEWLLGLHRAPEKLRKLSEINKL 165
            +  +     +   +A + CS+ + +H       G D E    +  A +    +S + + 
Sbjct: 111 GIPKANFELWSFAVSAINGCSHCLVAHEHTLRTVGVDRE---AIFEALKAAAIVSGVAQA 167

Query: 166 LA 167
           LA
Sbjct: 168 LA 169


>2ZFD-A nrPDB
          Length = 226

 Score = 30.0 bits (66), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 10/76 (13%)

Query: 254 SARDVEALMERMQQLQESLLRDEGTSQEEME-SRFELEKSESLLVTPSADILEPSPHPDM 312
           S  ++EAL E  +++  +++ D   ++EE + + F+  K ESL      D+ + + H  +
Sbjct: 43  SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFD-TKHNGI 101

Query: 313 LCFVEDPTFGYEDFTR 328
           L        G+E+F R
Sbjct: 102 L--------GFEEFAR 109


>1UHN-A nrPDB
          Length = 189

 Score = 30.0 bits (66), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 10/76 (13%)

Query: 254 SARDVEALMERMQQLQESLLRDEGTSQEEME-SRFELEKSESLLVTPSADILEPSPHPDM 312
           S  ++EAL E  +++  +++ D   ++EE + + F+  K ESL      D+ + + H  +
Sbjct: 12  SVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFD-TKHNGI 70

Query: 313 LCFVEDPTFGYEDFTR 328
           L        G+E+F R
Sbjct: 71  L--------GFEEFAR 78


>1WDE-A nrPDB
          Length = 294

 Score = 29.3 bits (64), Expect = 4.2,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 39/116 (33%), Gaps = 11/116 (9%)

Query: 67  LEALMSSGRVDNLAVVMGLHPDYFTSFWRLHYLLLHTDGPLASSWRHYIAIMAAARHQCS 126
           LEA ++   +  ++ V         SF+R    +      L   WR    I  A R   +
Sbjct: 108 LEAGVAVRYIPGVSGVQAARGATMLSFYRFGGTVT-----LPGPWRGVTPISVARRIYLN 162

Query: 127 YLVGSHMAEFL---QTGGDPEWLLGLHRAPEKLRKLSEIN---KLLAHRPWLITKE 176
              G H    L   + G       G+    E  R+ +       LLA  P ++ + 
Sbjct: 163 LCAGLHTTALLDVDERGVQLSPGQGVSLLLEADREYAREAGAPALLARLPSVLVEA 218


>4CW5-A nrPDB
          Length = 454

 Score = 28.1 bits (61), Expect = 9.7,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 292 SESLLVTPSADILEPSPHPDMLCFVEDPTFGYEDFTRRGAQAPPTFRAQDYTWEDHGYSL 351
           S++ L    A + +  P  D +C VE  + G+ D        P   R +D   E HGY+ 
Sbjct: 173 SDNRLTAGEAALAKEIPMADDIC-VEADSGGHTDQGIPYTLMPAMIRLRDRMMEKHGYAK 231

Query: 352 IQRLYPEGG 360
             R+   GG
Sbjct: 232 KVRIGAAGG 240


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.316    0.133    0.382 

Lambda     K      H
   0.267   0.0409    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,887,897
Number of Sequences: 36641
Number of extensions: 840816
Number of successful extensions: 2370
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2345
Number of HSP's gapped (non-prelim): 41
length of query: 480
length of database: 10,336,785
effective HSP length: 101
effective length of query: 379
effective length of database: 6,636,044
effective search space: 2515060676
effective search space used: 2515060676
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)