BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P57743 (89 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6ASO-C nrPDB 181 7e-47 4EMG-A nrPDB 79 4e-16 3JCR-3 nrPDB 76 4e-15 1JBM-A nrPDB 56 3e-09 4C8Q-A nrPDB 49 5e-07 4M75-A nrPDB 49 6e-07 6J6Q-g nrPDB 47 2e-06 3PGG-A nrPDB 47 2e-06 3JB9-J nrPDB 47 2e-06 1TH7-A nrPDB 47 2e-06 3SWN-C nrPDB 46 3e-06 5GM6-g nrPDB 46 4e-06 6ASO-G nrPDB 45 8e-06 6QX9-67 nrPDB 43 3e-05 6QX9-1b nrPDB 42 8e-05 5LJ3-g nrPDB 41 1e-04 6AH0-d nrPDB 40 3e-04 4M77-E nrPDB 40 3e-04 5MQF-a nrPDB 39 5e-04 5MKL-A1 nrPDB 39 5e-04 6AH0-t nrPDB 38 0.001 1I8F-A nrPDB 37 0.002 4XQ3-A nrPDB 37 0.002 3JB9-E nrPDB 36 0.004 4EMK-A nrPDB 36 0.005 3SWN-A nrPDB 35 0.005 3JB9-I nrPDB 35 0.008 3JB9-H nrPDB 35 0.009 6AH0-z nrPDB 35 0.010 6QX9-66 nrPDB 34 0.014 3JB9-G nrPDB 34 0.016 5GMK-m nrPDB 32 0.079 5LQW-b nrPDB 31 0.092 5GMK-i nrPDB 31 0.092 6QW6-4e nrPDB 30 0.19 6QDV-e nrPDB 30 0.21 6QW6-64 nrPDB 30 0.22 6QX9-62 nrPDB 30 0.24 1N9R-A nrPDB 30 0.26 1FUP-A nrPDB 28 0.78 3C30-A nrPDB 28 1.2 5HS2-A nrPDB 27 2.7 1ORR-A nrPDB 26 3.1 5ZLU-EE nrPDB 25 5.1 5VSU-F nrPDB 25 8.3 >6ASO-C nrPDB Length = 97 Score = 181 bits (459), Expect = 7e-47, Method: Compositional matrix adjust. Identities = 89/89 (100%), Positives = 89/89 (100%) Query: 1 METPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESE 60 METPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESE Sbjct: 1 METPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESE 60 Query: 61 RRCEMVFIRGDTVTLISTPSEDDDGAVEI 89 RRCEMVFIRGDTVTLISTPSEDDDGAVEI Sbjct: 61 RRCEMVFIRGDTVTLISTPSEDDDGAVEI 89 >4EMG-A nrPDB Length = 93 Score = 79.0 bits (193), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 6/82 (7%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEE------LS 57 PLDL++L+LDE VY+KLRG R L G L A+D H N+VL DA E + ++EE L Sbjct: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 Query: 58 ESERRCEMVFIRGDTVTLISTP 79 + EM+F+RGD+V LI+ P Sbjct: 70 TIRKHYEMLFVRGDSVILIAPP 91 >3JCR-3 nrPDB Length = 102 Score = 75.9 bits (185), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 37/85 (43%), Positives = 56/85 (65%), Gaps = 6/85 (7%) Query: 1 METPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQL-----NNEE 55 +E PLDL++L+LDER+Y+K+R R L G L A+D H N++L D ET+ + EE Sbjct: 14 VEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEE 73 Query: 56 LSESERR-CEMVFIRGDTVTLISTP 79 + +S +R M+F+RGD V L++ P Sbjct: 74 IYKSTKRNIPMLFVRGDGVVLVAPP 98 >1JBM-A nrPDB Length = 86 Score = 55.8 bits (133), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 45/79 (56%), Gaps = 11/79 (13%) Query: 1 METPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESE 60 ++ PLD L +L+ V IKL+G R G L++FD H N+VL+DA EEL + E Sbjct: 11 VQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDA---------EELEDGE 61 Query: 61 --RRCEMVFIRGDTVTLIS 77 RR V IRGD + IS Sbjct: 62 VTRRLGTVLIRGDNIVYIS 80 >4C8Q-A nrPDB Length = 101 Score = 48.9 bits (115), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Query: 11 NLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFIRG 70 ++D ++++ LR R L G L+ FD + N++L D VE IY + +E +R M IRG Sbjct: 5 SVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFM--IRG 62 Query: 71 DTVTLIS 77 + V ++ Sbjct: 63 ENVVMLG 69 >4M75-A nrPDB Length = 144 Score = 48.5 bits (114), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Query: 11 NLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFIRG 70 ++D ++++ LR R L G L+ FD + N++L D VE IY + +E +R M IRG Sbjct: 21 SVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFM--IRG 78 Query: 71 DTVTLIS 77 + V ++ Sbjct: 79 ENVVMLG 85 >6J6Q-g nrPDB Length = 110 Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%) Query: 16 VYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFIRGDTVTL 75 V I LR ++ ++AFD HCN+VL + E + + + ER +F+RGD+V + Sbjct: 44 VIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRERFISKLFLRGDSVIV 103 Query: 76 I-STPSE 81 + TP E Sbjct: 104 VLKTPVE 110 >3PGG-A nrPDB Length = 121 Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 9/89 (10%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESER-- 61 PL L+ + R+Y+ ++G + G L+ FD + N+VL D E ++ + E++S + Sbjct: 29 PLALIDKCIGNRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQEYGFKADEEDISGGNKKL 88 Query: 62 ------RCEMVFIRGDTVTLISTPSEDDD 84 R E + + G+ V ++ P D D Sbjct: 89 KRVMVNRLETILLSGNNVAML-VPGGDPD 116 >3JB9-J nrPDB Length = 77 Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 7/71 (9%) Query: 8 LKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVF 67 LK LD +V+++L G+R + G L+ +D NIVL D++E E++ + + V Sbjct: 9 LKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIE-------EKVDGEKVKIGSVA 61 Query: 68 IRGDTVTLIST 78 IRG++V +I T Sbjct: 62 IRGNSVIMIET 72 >1TH7-A nrPDB Length = 81 Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 7/76 (9%) Query: 2 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESER 61 ET +L +L+ V +KL+G + + G L+++D H N+VLSD+ E + S + Sbjct: 8 ETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEI-------QSDGSGK 60 Query: 62 RCEMVFIRGDTVTLIS 77 + + IRGD V LIS Sbjct: 61 KLGTIVIRGDNVILIS 76 >3SWN-C nrPDB Length = 117 Score = 46.2 bits (108), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%) Query: 2 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESER 61 E+ LDL + D+R+ G R + G L+ FD N+VL D E + + +L+ + R Sbjct: 27 ESILDLSRYQ-DQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIR 85 Query: 62 RCEMVFIRGDTVTLISTPSEDDDGAVEI 89 + +V +RG T+ LI+ DG+ EI Sbjct: 86 KLGLVVVRGTTLVLIAP----MDGSEEI 109 >5GM6-g nrPDB Length = 94 Score = 45.8 bits (107), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Query: 16 VYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFIRGDTVTL 75 V I LR ++ ++AFD HCN+VL + E + + + ER +F+RGD+V + Sbjct: 30 VIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRERFISKLFLRGDSVIV 89 Query: 76 I-STP 79 + TP Sbjct: 90 VLKTP 94 >6ASO-G nrPDB Length = 115 Score = 44.7 bits (104), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%) Query: 2 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQL---NNEEL-S 57 E LDL K D ++ +KL G + ++G L+ +D N+VL D VE + NN EL S Sbjct: 25 EAILDLAKYK-DSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELIS 83 Query: 58 ESERRCEMVFIRGDTVTLISTPSEDD 83 ++ R+ + IRG + +S+ D Sbjct: 84 KNARKLGLTVIRGTILVSLSSAEGSD 109 >6QX9-67 nrPDB Length = 103 Score = 43.1 bits (100), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 2/76 (2%) Query: 2 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNE-ELSESE 60 E+ LDL K +D+ + +K +G R G L+ FD N+VL +E + +++ +L+E Sbjct: 10 ESILDLSKY-IDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDT 68 Query: 61 RRCEMVFIRGDTVTLI 76 R+ +V RG +V LI Sbjct: 69 RQLGLVVCRGTSVVLI 84 >6QX9-1b nrPDB Length = 240 Score = 41.6 bits (96), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 11 NLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVE--TIYQLNNEELSESERRC-EMVF 67 ++D R+ L+ R +GT +AFD H N++L D E I N+++ E+R +V Sbjct: 12 HIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKRVLGLVL 71 Query: 68 IRGDTVT--LISTPSEDDDGAVEI 89 +RG+ + + P D G + Sbjct: 72 LRGENLVSMTVEGPPPKDTGIARV 95 >5LJ3-g nrPDB Length = 77 Score = 40.8 bits (94), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 39/66 (59%), Gaps = 4/66 (6%) Query: 8 LKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVF 67 LK +D+++ + + G+R + G L+ +D N+VL DA+E +N E+ + + + Sbjct: 7 LKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAME----INGEDPANNHQLGLQTV 62 Query: 68 IRGDTV 73 IRG+++ Sbjct: 63 IRGNSI 68 >6AH0-d nrPDB Length = 76 Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 7/69 (10%) Query: 8 LKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVF 67 LK +D+++ +KL G R + G L+ FD N+V+ + VE S + MV Sbjct: 9 LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEM-------ATSGQQNNIGMVV 61 Query: 68 IRGDTVTLI 76 IRG+++ ++ Sbjct: 62 IRGNSIIML 70 >4M77-E nrPDB Length = 93 Score = 39.7 bits (91), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/86 (27%), Positives = 48/86 (55%), Gaps = 10/86 (11%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRC 63 PL+++ ++++V I L+ R GTL FD N++L DAVE + ++ E+ S +E+ Sbjct: 8 PLEVIDKTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVE--WLIDPEDESRNEKVM 65 Query: 64 EM---VFIRGDTVTLI-----STPSE 81 + + + G+ + ++ TP+E Sbjct: 66 QHHGRMLLSGNNIAILVPGGKKTPTE 91 >5MQF-a nrPDB Length = 118 Score = 38.9 bits (89), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 7/71 (9%) Query: 13 DERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQ-------LNNEELSESERRCEM 65 + +V I R + L+G ++AFD HCN+VL + E + + +R Sbjct: 39 NTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISK 98 Query: 66 VFIRGDTVTLI 76 +F+RGD+V ++ Sbjct: 99 MFLRGDSVIVV 109 >5MKL-A1 nrPDB Length = 87 Score = 38.9 bits (89), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 5/81 (6%) Query: 1 METPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESE 60 +E PL LK L++ V +KL+ VG L+ D N+VL D E E S+ Sbjct: 5 IENPLKSLKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEY-----REGTSDPV 59 Query: 61 RRCEMVFIRGDTVTLISTPSE 81 + V IRG + IS E Sbjct: 60 AKYGRVLIRGSNILFISIDYE 80 >6AH0-t nrPDB Length = 91 Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 10/81 (12%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRC 63 PL+L+ + R++I ++ + +VGTL FD N+VL D E E++ RR Sbjct: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEF-------EITPEGRRI 66 Query: 64 ---EMVFIRGDTVTLISTPSE 81 + + + G+ +T++ E Sbjct: 67 TKLDQILLNGNNITMLVPGGE 87 >1I8F-A nrPDB Length = 81 Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 8/70 (11%) Query: 8 LKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVF 67 L+ ++ ++V +KLR + + G L++FD H N++L DA E I +R MV Sbjct: 16 LQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIID-------GNVYKRGTMV- 67 Query: 68 IRGDTVTLIS 77 +RG+ V IS Sbjct: 68 VRGENVLFIS 77 >4XQ3-A nrPDB Length = 91 Score = 36.6 bits (83), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 5/81 (6%) Query: 1 METPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESE 60 +E PL L+ ++ V +KL+ +G L+ D N+VL D E E SE Sbjct: 9 VENPLKSLRTAINRIVLVKLKDGSEYIGKLEQTDGTMNLVLRDCTEI-----REGTSEPV 63 Query: 61 RRCEMVFIRGDTVTLISTPSE 81 + V IRG + IS E Sbjct: 64 AKYGRVLIRGSNILFISVDYE 84 >3JB9-E nrPDB Length = 147 Score = 35.8 bits (81), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%) Query: 12 LDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIY----QLNNEELSESERRCEMVF 67 L+ + + + RT VG L AFD N+VLSD E + + + + E +R +V Sbjct: 10 LNHSLNVTTKDGRTFVGQLLAFDGFMNLVLSDCQEYRHIKKQNVPSNSVYEEKRMLGLVI 69 Query: 68 IRGDTVTLIS 77 +RG+ + +S Sbjct: 70 LRGEFIVSLS 79 >4EMK-A nrPDB Length = 94 Score = 35.8 bits (81), Expect = 0.005, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 24/43 (55%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVE 46 PL+L+ + +++ ++ R GTL FD + NIVL D E Sbjct: 21 PLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTE 63 >3SWN-A nrPDB Length = 82 Score = 35.4 bits (80), Expect = 0.005, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 24/43 (55%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVE 46 PL+L+ + +++ ++ R GTL FD + NIVL D E Sbjct: 9 PLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTE 51 >3JB9-I nrPDB Length = 78 Score = 35.0 bits (79), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 36/69 (52%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRC 63 P L+ + + V ++L+ + GTLQ+ DS+ N+ L +A E + + +L E RC Sbjct: 8 PKPFLQGLIGKPVLVRLKWGQEYKGTLQSVDSYMNLQLLNAEELVDGVKTGDLGEILIRC 67 Query: 64 EMVFIRGDT 72 V G++ Sbjct: 68 NNVLWVGES 76 >3JB9-H nrPDB Length = 84 Score = 34.7 bits (78), Expect = 0.009, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 7/53 (13%) Query: 26 LVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFIRGDTVTLIST 78 L G ++ FD NIVL DAV+ + N EL + ++GD +TLI Sbjct: 38 LQGQIRGFDEFMNIVLDDAVQVDAKNNKRELGR-------ILLKGDNITLIQA 83 >6AH0-z nrPDB Length = 96 Score = 34.7 bits (78), Expect = 0.010, Method: Compositional matrix adjust. Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 13/72 (18%) Query: 23 ARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMV-----FIRGDTVTLIS 77 R +VGTL+ FD N++L ++ E ++ S + E V +RGD V +I Sbjct: 20 GRMIVGTLKGFDQTINLILDESHERVFS--------SSQGVEQVVLGLYIVRGDNVAVIG 71 Query: 78 TPSEDDDGAVEI 89 E+ D A+++ Sbjct: 72 EIDEETDSALDL 83 >6QX9-66 nrPDB Length = 80 Score = 34.3 bits (77), Expect = 0.014, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 7/77 (9%) Query: 2 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESER 61 +TP D LK + V +KL G L D + NI L E + N +L + Sbjct: 6 QTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYV----NGQL---KN 58 Query: 62 RCEMVFIRGDTVTLIST 78 + FIRG+ V IST Sbjct: 59 KYGDAFIRGNNVLYIST 75 >3JB9-G nrPDB Length = 115 Score = 33.9 bits (76), Expect = 0.016, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 8/81 (9%) Query: 4 PLDLLKLNLD--ERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSE--- 58 PL +L+ + ++V I R + L+ ++AFD H N+VL + E + + Sbjct: 29 PLSVLQQAVKNHDQVLINCRNNKKLLARVKAFDRHSNMVLENVKEMWTEKKRTASGKKGK 88 Query: 59 ---SERRCEMVFIRGDTVTLI 76 +R +F+RGD V L+ Sbjct: 89 AINKDRFISKMFLRGDGVVLV 109 >5GMK-m nrPDB Length = 146 Score = 31.6 bits (70), Expect = 0.079, Method: Compositional matrix adjust. Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 20/95 (21%) Query: 5 LDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSD------------------AVE 46 ++ LK +E+V I+L+ T+ GTLQ+ N +L+D A+ Sbjct: 4 VNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 Query: 47 TIYQLNNEELSESERRCEMVF--IRGDTVTLISTP 79 ++Y ++ + S+ + + IRG+T+ I P Sbjct: 64 SLYLTGGQQPTASDNIASLQYINIRGNTIRQIILP 98 >5LQW-b nrPDB Length = 196 Score = 31.2 bits (69), Expect = 0.092, Method: Compositional matrix adjust. Identities = 12/35 (34%), Positives = 22/35 (62%) Query: 12 LDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVE 46 +D ++ + + R +G L AFD H N+VL++ +E Sbjct: 16 IDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIE 50 >5GMK-i nrPDB Length = 94 Score = 31.2 bits (69), Expect = 0.092, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 10/78 (12%) Query: 2 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVE-TIYQLNNEELSESE 60 +TP+ + L E++ I+++G +VG FD N+V+ +AVE + + +E E Sbjct: 24 QTPVTIW---LFEQIGIRIKGK--IVG----FDEFMNVVIDEAVEIPVNSADGKEDVEKG 74 Query: 61 RRCEMVFIRGDTVTLIST 78 + ++GD +TLI++ Sbjct: 75 TPLGKILLKGDNITLITS 92 >6QW6-4e nrPDB Length = 92 Score = 30.4 bits (67), Expect = 0.19, Method: Compositional matrix adjust. Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 10/84 (11%) Query: 1 METPLDLLKLNLDER----VYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEEL 56 M P++L+ L R V++ + + G + FD + N+VL DA E Sbjct: 14 MVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEI------HSK 67 Query: 57 SESERRCEMVFIRGDTVTLISTPS 80 ++S ++ + ++GD +TL+ + S Sbjct: 68 TKSRKQLGRIMLKGDNITLLQSVS 91 >6QDV-e nrPDB Length = 81 Score = 30.0 bits (66), Expect = 0.21, Method: Compositional matrix adjust. Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 10/84 (11%) Query: 1 METPLDLLKLNLDER----VYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEEL 56 M P++L+ L R V++ + + G + FD + N+VL DA E Sbjct: 4 MVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEI------HSK 57 Query: 57 SESERRCEMVFIRGDTVTLISTPS 80 ++S ++ + ++GD +TL+ + S Sbjct: 58 TKSRKQLGRIMLKGDNITLLQSVS 81 >6QW6-64 nrPDB Length = 139 Score = 30.0 bits (66), Expect = 0.22, Method: Compositional matrix adjust. Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 6/78 (7%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRC 63 PL LLK + + ++L+ T G L + D+ NI L + + T + R Sbjct: 3 PLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICT------SRDGDKFWRM 56 Query: 64 EMVFIRGDTVTLISTPSE 81 +IRG T+ + P E Sbjct: 57 PECYIRGSTIKYLRIPDE 74 >6QX9-62 nrPDB Length = 95 Score = 30.0 bits (66), Expect = 0.24, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 5/69 (7%) Query: 16 VYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFIRGDTVTL 75 V ++L+ ++ GTL + D + NI L+D T + L S + C FIRG V Sbjct: 15 VVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHML--SVKNC---FIRGSVVRY 69 Query: 76 ISTPSEDDD 84 + P+++ D Sbjct: 70 VQLPADEVD 78 >1N9R-A nrPDB Length = 93 Score = 30.0 bits (66), Expect = 0.26, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Query: 3 TPLDLLKLNLDERVYIKLRGART-LVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESER 61 P LK ++ RV +KL+ T GTL + D++ N+ L++A E + +++ L E Sbjct: 21 NPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFI 80 Query: 62 RCEMV-FIR 69 RC V +IR Sbjct: 81 RCNNVLYIR 89 >1FUP-A nrPDB Length = 472 Score = 28.1 bits (61), Expect = 0.78, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 20/37 (54%) Query: 20 LRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEEL 56 L+ R L +++F+ HC + + E I QL NE L Sbjct: 370 LQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESL 406 >3C30-A nrPDB Length = 270 Score = 27.7 bits (60), Expect = 1.2, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%) Query: 30 LQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFIRGDTVTLISTPSE 81 L+ SH NI+ D + Y + +EL++ RR V I G+ L+ TPSE Sbjct: 83 LRFISSHDNILWDDGNASFYGIAQQELNKLIRR---VAISGNW-HLVQTPSE 130 >5HS2-A nrPDB Length = 232 Score = 26.6 bits (57), Expect = 2.7, Method: Compositional matrix adjust. Identities = 10/29 (34%), Positives = 21/29 (72%), Gaps = 2/29 (6%) Query: 15 RVYIKLRGARTLVGTLQAFDSH--CNIVL 41 +++I+L+G ++ TL+ FDSH C+ ++ Sbjct: 22 KLFIELKGDPVIIHTLRVFDSHRQCDKII 50 >1ORR-A nrPDB Length = 347 Score = 26.2 bits (56), Expect = 3.1, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 24/45 (53%) Query: 18 IKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERR 62 I + G L+ ++ ++S+CNI+ S + L + +E+E R Sbjct: 99 INVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETR 143 >5ZLU-EE nrPDB Length = 497 Score = 25.4 bits (54), Expect = 5.1, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 6/48 (12%) Query: 17 YIKLRGARTLVGTLQAFD------SHCNIVLSDAVETIYQLNNEELSE 58 ++ L G L+G L+AFD SH L V+ I++L + +++E Sbjct: 129 HLDLNGIDLLIGQLKAFDGALLVISHDRYFLDMVVDKIWELKDGKITE 176 >5VSU-F nrPDB Length = 88 Score = 25.0 bits (53), Expect = 8.3, Method: Compositional matrix adjust. Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 3/66 (4%) Query: 12 LDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFIRGD 71 + + V +KL G L++ D N+ LS A E + + VF+RG Sbjct: 22 IGKTVNVKLASGLLYSGRLESIDGFMNVALSSATE---HYESNNNKLLNKFNSDVFLRGT 78 Query: 72 TVTLIS 77 V IS Sbjct: 79 QVMYIS 84 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6ASO-C nrPDB 114 9e-27 3SWN-C nrPDB 88 8e-19 4EMG-A nrPDB 85 6e-18 6QX9-1b nrPDB 84 1e-17 3JCR-3 nrPDB 83 2e-17 3PGG-A nrPDB 83 3e-17 6QX9-67 nrPDB 80 3e-16 6ASO-G nrPDB 78 6e-16 5MKL-A1 nrPDB 77 2e-15 1TH7-A nrPDB 77 2e-15 1JBM-A nrPDB 75 6e-15 6AH0-d nrPDB 73 2e-14 6AH0-t nrPDB 73 3e-14 6J6Q-g nrPDB 73 4e-14 4M75-A nrPDB 72 5e-14 5GM6-g nrPDB 72 6e-14 4M77-E nrPDB 70 2e-13 4C8Q-A nrPDB 69 4e-13 1I8F-A nrPDB 69 5e-13 3JB9-J nrPDB 68 9e-13 5MQF-a nrPDB 68 1e-12 5LJ3-g nrPDB 65 6e-12 Sequences not found previously or not previously below threshold: 4XQ3-A nrPDB 70 2e-13 3JB9-E nrPDB 63 2e-11 3JB9-G nrPDB 63 2e-11 4EMK-A nrPDB 59 5e-10 3SWN-A nrPDB 59 6e-10 6AH0-z nrPDB 53 2e-08 6QX9-66 nrPDB 53 3e-08 5LQW-b nrPDB 48 9e-07 3SWN-B nrPDB 47 2e-06 5ZWM-s nrPDB 47 2e-06 3JB9-H nrPDB 46 4e-06 4M75-G nrPDB 46 5e-06 6QW6-4e nrPDB 45 5e-06 1LJO-A nrPDB 45 6e-06 6QDV-e nrPDB 45 9e-06 4C8Q-D nrPDB 45 1e-05 3JB9-I nrPDB 44 2e-05 6ASO-D nrPDB 43 2e-05 5GMK-i nrPDB 43 4e-05 6QDV-f nrPDB 42 5e-05 5Z58-f nrPDB 42 5e-05 4EMH-A nrPDB 41 1e-04 5VSU-F nrPDB 41 1e-04 1N9R-A nrPDB 40 3e-04 6QW6-64 nrPDB 40 3e-04 4C8Q-B nrPDB 38 7e-04 5VSU-B nrPDB 38 0.001 4N0A-C nrPDB 38 0.001 6BK8-g nrPDB 35 0.005 5GMK-m nrPDB 35 0.006 6QX9-62 nrPDB 35 0.008 4M7D-A nrPDB 35 0.011 1M5Q-A nrPDB 31 0.14 6ASO-H nrPDB 30 0.20 3B2D-A nrPDB 27 2.4 3JB9-D nrPDB 26 3.0 6OIX-A nrPDB 26 4.7 6Q70-A nrPDB 25 5.8 2B3O-A nrPDB 25 6.7 3PS5-A nrPDB 25 7.0 6ER0-A nrPDB 25 7.5 2EWN-A nrPDB 25 9.2 >6ASO-C nrPDB Length = 97 Score = 114 bits (286), Expect = 9e-27, Method: Composition-based stats. Identities = 89/89 (100%), Positives = 89/89 (100%) Query: 1 METPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESE 60 METPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESE Sbjct: 1 METPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESE 60 Query: 61 RRCEMVFIRGDTVTLISTPSEDDDGAVEI 89 RRCEMVFIRGDTVTLISTPSEDDDGAVEI Sbjct: 61 RRCEMVFIRGDTVTLISTPSEDDDGAVEI 89 >3SWN-C nrPDB Length = 117 Score = 88.1 bits (217), Expect = 8e-19, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%) Query: 2 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESER 61 E+ LDL + D+R+ G R + G L+ FD N+VL D E + + +L+ + R Sbjct: 27 ESILDLSRYQ-DQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIR 85 Query: 62 RCEMVFIRGDTVTLISTPSEDDDGAVEI 89 + +V +RG T+ LI+ DG+ EI Sbjct: 86 KLGLVVVRGTTLVLIAP----MDGSEEI 109 >4EMG-A nrPDB Length = 93 Score = 85.0 bits (209), Expect = 6e-18, Method: Composition-based stats. Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 6/85 (7%) Query: 1 METPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESE 60 + PLDL++L+LDE VY+KLRG R L G L A+D H N+VL DA E + ++EE + + Sbjct: 7 VAEPLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDK 66 Query: 61 ------RRCEMVFIRGDTVTLISTP 79 + EM+F+RGD+V LI+ P Sbjct: 67 ALKTIRKHYEMLFVRGDSVILIAPP 91 >6QX9-1b nrPDB Length = 240 Score = 83.8 bits (206), Expect = 1e-17, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 5/84 (5%) Query: 11 NLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVET--IYQLNNEELSESERR-CEMVF 67 ++D R+ L+ R +GT +AFD H N++L D E I N+++ E+R +V Sbjct: 12 HIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKRVLGLVL 71 Query: 68 IRGDTVT--LISTPSEDDDGAVEI 89 +RG+ + + P D G + Sbjct: 72 LRGENLVSMTVEGPPPKDTGIARV 95 >3JCR-3 nrPDB Length = 102 Score = 83.5 bits (205), Expect = 2e-17, Method: Composition-based stats. Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 6/85 (7%) Query: 1 METPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESE 60 +E PLDL++L+LDER+Y+K+R R L G L A+D H N++L D ET+ + +E + E Sbjct: 14 VEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEE 73 Query: 61 ------RRCEMVFIRGDTVTLISTP 79 R M+F+RGD V L++ P Sbjct: 74 IYKSTKRNIPMLFVRGDGVVLVAPP 98 >3PGG-A nrPDB Length = 121 Score = 82.7 bits (203), Expect = 3e-17, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 9/89 (10%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESER-- 61 PL L+ + R+Y+ ++G + G L+ FD + N+VL D E ++ + E++S + Sbjct: 29 PLALIDKCIGNRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQEYGFKADEEDISGGNKKL 88 Query: 62 ------RCEMVFIRGDTVTLISTPSEDDD 84 R E + + G+ V ++ P D D Sbjct: 89 KRVMVNRLETILLSGNNVAML-VPGGDPD 116 >6QX9-67 nrPDB Length = 103 Score = 79.6 bits (195), Expect = 3e-16, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 2/78 (2%) Query: 2 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNE-ELSESE 60 E+ LDL K +D+ + +K +G R G L+ FD N+VL +E + +++ +L+E Sbjct: 10 ESILDLSKY-IDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDT 68 Query: 61 RRCEMVFIRGDTVTLIST 78 R+ +V RG +V LI Sbjct: 69 RQLGLVVCRGTSVVLICP 86 >6ASO-G nrPDB Length = 115 Score = 78.5 bits (192), Expect = 6e-16, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 5/86 (5%) Query: 2 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEE----LS 57 E LDL K D ++ +KL G + ++G L+ +D N+VL D VE + ++E +S Sbjct: 25 EAILDLAKYK-DSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELIS 83 Query: 58 ESERRCEMVFIRGDTVTLISTPSEDD 83 ++ R+ + IRG + +S+ D Sbjct: 84 KNARKLGLTVIRGTILVSLSSAEGSD 109 >5MKL-A1 nrPDB Length = 87 Score = 76.9 bits (188), Expect = 2e-15, Method: Composition-based stats. Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 5/88 (5%) Query: 1 METPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESE 60 +E PL LK L++ V +KL+ VG L+ D N+VL D E E S+ Sbjct: 5 IENPLKSLKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEY-----REGTSDPV 59 Query: 61 RRCEMVFIRGDTVTLISTPSEDDDGAVE 88 + V IRG + IS E G + Sbjct: 60 AKYGRVLIRGSNILFISIDYESIMGKEK 87 >1TH7-A nrPDB Length = 81 Score = 76.5 bits (187), Expect = 2e-15, Method: Composition-based stats. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 7/77 (9%) Query: 2 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESER 61 ET +L +L+ V +KL+G + + G L+++D H N+VLSD+ E + S + Sbjct: 8 ETAHKVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEI-------QSDGSGK 60 Query: 62 RCEMVFIRGDTVTLIST 78 + + IRGD V LIS Sbjct: 61 KLGTIVIRGDNVILISP 77 >1JBM-A nrPDB Length = 86 Score = 75.0 bits (183), Expect = 6e-15, Method: Composition-based stats. Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 7/77 (9%) Query: 1 METPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESE 60 ++ PLD L +L+ V IKL+G R G L++FD H N+VL+DA E E E Sbjct: 11 VQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEEL-------EDGEVT 63 Query: 61 RRCEMVFIRGDTVTLIS 77 RR V IRGD + IS Sbjct: 64 RRLGTVLIRGDNIVYIS 80 >6AH0-d nrPDB Length = 76 Score = 73.4 bits (179), Expect = 2e-14, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 7/70 (10%) Query: 8 LKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVF 67 LK +D+++ +KL G R + G L+ FD N+V+ + VE S + MV Sbjct: 9 LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMAT-------SGQQNNIGMVV 61 Query: 68 IRGDTVTLIS 77 IRG+++ ++ Sbjct: 62 IRGNSIIMLE 71 >6AH0-t nrPDB Length = 91 Score = 73.1 bits (178), Expect = 3e-14, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRC 63 PL+L+ + R++I ++ + +VGTL FD N+VL D E ++ + Sbjct: 14 PLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRIT----KL 69 Query: 64 EMVFIRGDTVTLISTPSEDDD 84 + + + G+ +T++ E + Sbjct: 70 DQILLNGNNITMLVPGGEGPE 90 >6J6Q-g nrPDB Length = 110 Score = 72.7 bits (177), Expect = 4e-14, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%) Query: 4 PLDLLKLNLDER--VYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESER 61 P+ L+ + R V I LR ++ ++AFD HCN+VL + E + + + ER Sbjct: 30 PMSLINDAMVTRTPVIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRER 89 Query: 62 RCEMVFIRGDTVT-LISTPSE 81 +F+RGD+V ++ TP E Sbjct: 90 FISKLFLRGDSVIVVLKTPVE 110 >4M75-A nrPDB Length = 144 Score = 72.3 bits (176), Expect = 5e-14, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Query: 11 NLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFIRG 70 ++D ++++ LR R L G L+ FD + N++L D VE IY + +E +R M IRG Sbjct: 21 SVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFM--IRG 78 Query: 71 DTVTLIS 77 + V ++ Sbjct: 79 ENVVMLG 85 >5GM6-g nrPDB Length = 94 Score = 71.9 bits (175), Expect = 6e-14, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%) Query: 4 PLDLLKLNLDER--VYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESER 61 P+ L+ + R V I LR ++ ++AFD HCN+VL + E + + + ER Sbjct: 16 PMSLINDAMVTRTPVIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRER 75 Query: 62 RCEMVFIRGDTVTLI 76 +F+RGD+V ++ Sbjct: 76 FISKLFLRGDSVIVV 90 >4XQ3-A nrPDB Length = 91 Score = 70.0 bits (170), Expect = 2e-13, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 5/88 (5%) Query: 1 METPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESE 60 +E PL L+ ++ V +KL+ +G L+ D N+VL D E E SE Sbjct: 9 VENPLKSLRTAINRIVLVKLKDGSEYIGKLEQTDGTMNLVLRDCTEI-----REGTSEPV 63 Query: 61 RRCEMVFIRGDTVTLISTPSEDDDGAVE 88 + V IRG + IS E + + Sbjct: 64 AKYGRVLIRGSNILFISVDYETVMNSEK 91 >4M77-E nrPDB Length = 93 Score = 70.0 bits (170), Expect = 2e-13, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 5/82 (6%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRC 63 PL+++ ++++V I L+ R GTL FD N++L DAVE + ++ E+ S +E+ Sbjct: 8 PLEVIDKTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVE--WLIDPEDESRNEKVM 65 Query: 64 ---EMVFIRGDTVTLISTPSED 82 + + G+ + ++ + Sbjct: 66 QHHGRMLLSGNNIAILVPGGKK 87 >4C8Q-A nrPDB Length = 101 Score = 69.2 bits (168), Expect = 4e-13, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Query: 11 NLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFIRG 70 ++D ++++ LR R L G L+ FD + N++L D VE IY + +E +R M IRG Sbjct: 5 SVDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFM--IRG 62 Query: 71 DTVTLIS 77 + V ++ Sbjct: 63 ENVVMLG 69 >1I8F-A nrPDB Length = 81 Score = 68.8 bits (167), Expect = 5e-13, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 8/74 (10%) Query: 8 LKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVF 67 L+ ++ ++V +KLR + + G L++FD H N++L DA E I + + + Sbjct: 16 LQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEII--------DGNVYKRGTMV 67 Query: 68 IRGDTVTLISTPSE 81 +RG+ V IS Sbjct: 68 VRGENVLFISPVPG 81 >3JB9-J nrPDB Length = 77 Score = 68.1 bits (165), Expect = 9e-13, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 7/71 (9%) Query: 8 LKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVF 67 LK LD +V+++L G+R + G L+ +D NIVL D++E E++ + + V Sbjct: 9 LKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIE-------EKVDGEKVKIGSVA 61 Query: 68 IRGDTVTLIST 78 IRG++V +I T Sbjct: 62 IRGNSVIMIET 72 >5MQF-a nrPDB Length = 118 Score = 67.7 bits (164), Expect = 1e-12, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 9/82 (10%) Query: 4 PLDLLKLNL--DERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQ-------LNNE 54 PL +L ++ + +V I R + L+G ++AFD HCN+VL + E + Sbjct: 28 PLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKS 87 Query: 55 ELSESERRCEMVFIRGDTVTLI 76 + +R +F+RGD+V ++ Sbjct: 88 KPVNKDRYISKMFLRGDSVIVV 109 >5LJ3-g nrPDB Length = 77 Score = 65.4 bits (158), Expect = 6e-12, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 4/70 (5%) Query: 8 LKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVF 67 LK +D+++ + + G+R + G L+ +D N+VL DA+E N E+ + + + Sbjct: 7 LKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEI----NGEDPANNHQLGLQTV 62 Query: 68 IRGDTVTLIS 77 IRG+++ + Sbjct: 63 IRGNSIISLE 72 >3JB9-E nrPDB Length = 147 Score = 63.4 bits (153), Expect = 2e-11, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 12 LDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSE----SERRCEMVF 67 L+ + + + RT VG L AFD N+VLSD E + S +R +V Sbjct: 10 LNHSLNVTTKDGRTFVGQLLAFDGFMNLVLSDCQEYRHIKKQNVPSNSVYEEKRMLGLVI 69 Query: 68 IRGDTVTLISTPSEDD 83 +RG+ + +S Sbjct: 70 LRGEFIVSLSVQGPPP 85 >3JB9-G nrPDB Length = 115 Score = 63.0 bits (152), Expect = 2e-11, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 8/81 (9%) Query: 4 PLDLLKLNLDE--RVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNE------E 55 PL +L+ + +V I R + L+ ++AFD H N+VL + E + + Sbjct: 29 PLSVLQQAVKNHDQVLINCRNNKKLLARVKAFDRHSNMVLENVKEMWTEKKRTASGKKGK 88 Query: 56 LSESERRCEMVFIRGDTVTLI 76 +R +F+RGD V L+ Sbjct: 89 AINKDRFISKMFLRGDGVVLV 109 >4EMK-A nrPDB Length = 94 Score = 58.8 bits (141), Expect = 5e-10, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 6/77 (7%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRC 63 PL+L+ + +++ ++ R GTL FD + NIVL D E ++ + Sbjct: 21 PLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEYDT------VTGVTEKH 74 Query: 64 EMVFIRGDTVTLISTPS 80 + + G+ + ++ Sbjct: 75 SEMLLNGNGMCMLIPGG 91 >3SWN-A nrPDB Length = 82 Score = 58.8 bits (141), Expect = 6e-10, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 6/77 (7%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRC 63 PL+L+ + +++ ++ R GTL FD + NIVL D E ++ + Sbjct: 9 PLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEYDT------VTGVTEKH 62 Query: 64 EMVFIRGDTVTLISTPS 80 + + G+ + ++ Sbjct: 63 SEMLLNGNGMCMLIPGG 79 >6AH0-z nrPDB Length = 96 Score = 53.4 bits (127), Expect = 2e-08, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 3/82 (3%) Query: 8 LKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVF 67 L+ ++ V + R +VGTL+ FD N++L ++ E ++ + + + Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGV---EQVVLGLYI 61 Query: 68 IRGDTVTLISTPSEDDDGAVEI 89 +RGD V +I E+ D A+++ Sbjct: 62 VRGDNVAVIGEIDEETDSALDL 83 >6QX9-66 nrPDB Length = 80 Score = 53.0 bits (126), Expect = 3e-08, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 7/77 (9%) Query: 2 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESER 61 +TP D LK + V +KL G L D + NI L E + + + Sbjct: 6 QTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVN-------GQLKN 58 Query: 62 RCEMVFIRGDTVTLIST 78 + FIRG+ V IST Sbjct: 59 KYGDAFIRGNNVLYIST 75 >5LQW-b nrPDB Length = 196 Score = 48.0 bits (113), Expect = 9e-07, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 15/82 (18%) Query: 8 LKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEE------------ 55 L +D ++ + + R +G L AFD H N+VL++ +E + Sbjct: 12 LANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEERVPKTQLDKLRPRKDSKDGT 71 Query: 56 ---LSESERRCEMVFIRGDTVT 74 + +R + +RG+ + Sbjct: 72 TLNIKVEKRVLGLTILRGEQIL 93 >3SWN-B nrPDB Length = 77 Score = 47.3 bits (111), Expect = 2e-06, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 7/75 (9%) Query: 3 TPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERR 62 +P + L + ++V I+L G L D + N+ L E + Sbjct: 6 SPNEFLNKVIGKKVLIRLSSGVDYKGILSCLDGYMNLALERTEEYVNGKK-------TNV 58 Query: 63 CEMVFIRGDTVTLIS 77 FIRG+ V +S Sbjct: 59 YGDAFIRGNNVLYVS 73 >5ZWM-s nrPDB Length = 187 Score = 46.9 bits (110), Expect = 2e-06, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 4/78 (5%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIY----QLNNEELSES 59 PL LL +++ I+L+ + G L D+ N+ LS+ E + S Sbjct: 3 PLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSK 62 Query: 60 ERRCEMVFIRGDTVTLIS 77 + ++IRG + I Sbjct: 63 AVKLNEIYIRGTFIKFIK 80 >3JB9-H nrPDB Length = 84 Score = 45.7 bits (107), Expect = 4e-06, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 7/73 (9%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRC 63 LL+ + +++ + L G ++ FD NIVL DAV+ + ++R Sbjct: 16 IFKLLQQHTPVSIWLFEQTDIRLQGQIRGFDEFMNIVLDDAVQV-------DAKNNKREL 68 Query: 64 EMVFIRGDTVTLI 76 + ++GD +TLI Sbjct: 69 GRILLKGDNITLI 81 >4M75-G nrPDB Length = 122 Score = 45.7 bits (107), Expect = 5e-06, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 4/78 (5%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIY----QLNNEELSES 59 PL LL +++ I+L+ + G L D+ N+ LS+ E + S Sbjct: 32 PLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSK 91 Query: 60 ERRCEMVFIRGDTVTLIS 77 + ++IRG + I Sbjct: 92 AVKLNEIYIRGTFIKFIK 109 >6QW6-4e nrPDB Length = 92 Score = 45.3 bits (106), Expect = 5e-06, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 10/82 (12%) Query: 1 METPLDLLKLNLDERVYIKL----RGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEEL 56 M P++L+ L R I++ + + G + FD + N+VL DA E + Sbjct: 14 MVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSK------ 67 Query: 57 SESERRCEMVFIRGDTVTLIST 78 ++S ++ + ++GD +TL+ + Sbjct: 68 TKSRKQLGRIMLKGDNITLLQS 89 >1LJO-A nrPDB Length = 77 Score = 45.3 bits (106), Expect = 6e-06, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 8/79 (10%) Query: 4 PLDLLKLNLDERVYIKLRGAR-TLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERR 62 P ++K + + + ++++G LVG L+ D + N+ L++A+E + E R Sbjct: 6 PNQMVKSMVGKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAMEC-------KGEEKVRS 58 Query: 63 CEMVFIRGDTVTLISTPSE 81 + +RG+ V LI E Sbjct: 59 LGEIVLRGNNVVLIQPQEE 77 >6QDV-e nrPDB Length = 81 Score = 44.6 bits (104), Expect = 9e-06, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 10/82 (12%) Query: 1 METPLDLLKLNLDERVYIKL----RGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEEL 56 M P++L+ L R I++ + + G + FD + N+VL DA E + Sbjct: 4 MVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSK------ 57 Query: 57 SESERRCEMVFIRGDTVTLIST 78 ++S ++ + ++GD +TL+ + Sbjct: 58 TKSRKQLGRIMLKGDNITLLQS 79 >4C8Q-D nrPDB Length = 114 Score = 44.6 bits (104), Expect = 1e-05, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 4/78 (5%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIY----QLNNEELSES 59 PL LL +++ I+L+ + G L D+ N+ LS+ E + S Sbjct: 3 PLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSK 62 Query: 60 ERRCEMVFIRGDTVTLIS 77 + ++IRG + I Sbjct: 63 AVKLNEIYIRGTFIKFIK 80 >3JB9-I nrPDB Length = 78 Score = 43.8 bits (102), Expect = 2e-05, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 7/75 (9%) Query: 3 TPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERR 62 P L+ + + V ++L+ + GTLQ+ DS+ N+ L +A E + + + Sbjct: 7 NPKPFLQGLIGKPVLVRLKWGQEYKGTLQSVDSYMNLQLLNAEELVDGVKTGD------- 59 Query: 63 CEMVFIRGDTVTLIS 77 + IR + V + Sbjct: 60 LGEILIRCNNVLWVG 74 >6ASO-D nrPDB Length = 93 Score = 43.4 bits (101), Expect = 2e-05, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 4/78 (5%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIY----QLNNEELSES 59 PL LL +++ I+L+ + G L D+ N+ LS+ E + S Sbjct: 3 PLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSK 62 Query: 60 ERRCEMVFIRGDTVTLIS 77 + ++IRG + I Sbjct: 63 AVKLNEIYIRGTFIKFIK 80 >5GMK-i nrPDB Length = 94 Score = 42.6 bits (99), Expect = 4e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 26 LVGTLQAFDSHCNIVLSDAVET-IYQLNNEELSESERRCEMVFIRGDTVTLISTP 79 + G + FD N+V+ +AVE + + +E E + ++GD +TLI++ Sbjct: 39 IKGKIVGFDEFMNVVIDEAVEIPVNSADGKEDVEKGTPLGKILLKGDNITLITSA 93 >6QDV-f nrPDB Length = 72 Score = 42.2 bits (98), Expect = 5e-05, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 7/74 (9%) Query: 3 TPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERR 62 P L + V +KL+ G L + D + N+ L++ E I + Sbjct: 3 NPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSG-------H 55 Query: 63 CEMVFIRGDTVTLI 76 V IR + V I Sbjct: 56 LGEVLIRCNNVLYI 69 >5Z58-f nrPDB Length = 86 Score = 42.2 bits (98), Expect = 5e-05, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 7/74 (9%) Query: 3 TPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERR 62 P L + V +KL+ G L + D + N+ L++ E I + Sbjct: 6 NPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSG-------H 58 Query: 63 CEMVFIRGDTVTLI 76 V IR + V I Sbjct: 59 LGEVLIRCNNVLYI 72 >4EMH-A nrPDB Length = 105 Score = 41.1 bits (95), Expect = 1e-04, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 6/78 (7%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRC 63 PL LL + ++L+ T G L+ D++ N+ L + + T+ + R Sbjct: 17 PLTLLNATQGRPILVELKNGETFNGHLENCDNYMNLTLREVIRTMPDGD------KFFRL 70 Query: 64 EMVFIRGDTVTLISTPSE 81 +IRG+ + + E Sbjct: 71 PECYIRGNNIKYLRIQDE 88 >5VSU-F nrPDB Length = 88 Score = 41.1 bits (95), Expect = 1e-04, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 3/72 (4%) Query: 6 DLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEM 65 + L + + V +KL G L++ D N+ LS A E + + Sbjct: 16 EFLSDIIGKTVNVKLASGLLYSGRLESIDGFMNVALSSATEHY---ESNNNKLLNKFNSD 72 Query: 66 VFIRGDTVTLIS 77 VF+RG V IS Sbjct: 73 VFLRGTQVMYIS 84 >1N9R-A nrPDB Length = 93 Score = 39.5 bits (91), Expect = 3e-04, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 8/75 (10%) Query: 3 TPLDLLKLNLDERVYIKLR-GARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESER 61 P LK ++ RV +KL+ + GTL + D++ N+ L++A E + + S Sbjct: 21 NPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGV-------SHG 73 Query: 62 RCEMVFIRGDTVTLI 76 +FIR + V I Sbjct: 74 TLGEIFIRCNNVLYI 88 >6QW6-64 nrPDB Length = 139 Score = 39.5 bits (91), Expect = 3e-04, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRC 63 PL LLK + + ++L+ T G L + D+ NI L + + T + R Sbjct: 3 PLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGD------KFWRM 56 Query: 64 EMVFIRGDTVTLISTPSEDDDGAVE 88 +IRG T+ + P E D E Sbjct: 57 PECYIRGSTIKYLRIPDEIIDMVKE 81 >4C8Q-B nrPDB Length = 105 Score = 38.4 bits (88), Expect = 7e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 5/68 (7%) Query: 9 KLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFI 68 K +D+ V ++L+ + GTLQ+ D N+ L + +E+ +FI Sbjct: 18 KTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNI-----SCTDEKKYPHLGSVRNIFI 72 Query: 69 RGDTVTLI 76 RG TV + Sbjct: 73 RGSTVRYV 80 >5VSU-B nrPDB Length = 98 Score = 37.6 bits (86), Expect = 0.001, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 5/68 (7%) Query: 9 KLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFI 68 K +D+ V ++L+ + GTLQ+ D N+ L + +E+ +FI Sbjct: 11 KTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNI-----SCTDEKKYPHLGSVRNIFI 65 Query: 69 RGDTVTLI 76 RG TV + Sbjct: 66 RGSTVRYV 73 >4N0A-C nrPDB Length = 109 Score = 37.6 bits (86), Expect = 0.001, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 5/68 (7%) Query: 9 KLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFI 68 K +D+ V ++L+ + GTLQ+ D N+ L + +E+ +FI Sbjct: 22 KTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNI-----SCTDEKKYPHLGSVRNIFI 76 Query: 69 RGDTVTLI 76 RG TV + Sbjct: 77 RGSTVRYV 84 >6BK8-g nrPDB Length = 101 Score = 35.3 bits (80), Expect = 0.005, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 7/76 (9%) Query: 4 PLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRC 63 P+ LL V ++L T G L + N+ L D + E + Sbjct: 7 PVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVI-------ATEPQGAVTHM 59 Query: 64 EMVFIRGDTVTLISTP 79 + +F+RG + I P Sbjct: 60 DQIFVRGSQIKFIVVP 75 >5GMK-m nrPDB Length = 146 Score = 35.3 bits (80), Expect = 0.006, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 35/66 (53%) Query: 5 LDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCE 64 ++ LK +E+V I+L+ T+ GTLQ+ N +L+D T+ Q +L+ + Sbjct: 4 VNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 Query: 65 MVFIRG 70 +++ G Sbjct: 64 SLYLTG 69 >6QX9-62 nrPDB Length = 95 Score = 34.9 bits (79), Expect = 0.008, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 5/76 (6%) Query: 9 KLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFI 68 K + + V ++L+ ++ GTL + D + NI L+D T + LS + FI Sbjct: 8 KSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLS-----VKNCFI 62 Query: 69 RGDTVTLISTPSEDDD 84 RG V + P+++ D Sbjct: 63 RGSVVRYVQLPADEVD 78 >4M7D-A nrPDB Length = 96 Score = 34.5 bits (78), Expect = 0.011, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 10/83 (12%) Query: 8 LKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVF 67 LK L++RV I L +L+ +L FD + N+ L++ I + + Sbjct: 5 LKDYLNKRVVIILVDGESLIASLNGFDKNTNLFLTNVFNRISKEFISKAQ---------L 55 Query: 68 IRGDTVTLIS-TPSEDDDGAVEI 89 +RG + L+ +E+DD I Sbjct: 56 LRGSEIALVGLIDAENDDSLAPI 78 >1M5Q-A nrPDB Length = 130 Score = 30.7 bits (68), Expect = 0.14, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 17/37 (45%) Query: 8 LKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDA 44 L L V + L G L A D+ NIVL++A Sbjct: 5 LNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANA 41 >6ASO-H nrPDB Length = 115 Score = 30.3 bits (67), Expect = 0.20, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 10/83 (12%) Query: 8 LKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVF 67 LK L++RV I L+ +L FD + N+ +++ I + + Sbjct: 5 LKDYLNKRVVIIKVDGECLIASLNGFDKNTNLFITNVFNRISKEFICKAQ---------L 55 Query: 68 IRGDTVTLIS-TPSEDDDGAVEI 89 +RG + L+ +E+DD I Sbjct: 56 LRGSEIALVGLIDAENDDSLAPI 78 >3B2D-A nrPDB Length = 603 Score = 26.8 bits (58), Expect = 2.4, Method: Composition-based stats. Identities = 6/47 (12%), Positives = 18/47 (38%) Query: 31 QAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFIRGDTVTLIS 77 + F N+ D +E+ +S + + + G+ + ++ Sbjct: 48 RTFSRLMNLTFLDLTRCQINWIHEDTFQSHHQLSTLVLTGNPLIFMA 94 >3JB9-D nrPDB Length = 97 Score = 26.5 bits (57), Expect = 3.0, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 7/75 (9%) Query: 5 LDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCE 64 + LL V ++L T G L + + N + ++ + Sbjct: 5 IKLLHETQGHIVTMELENGSTYRGKLIEAEDNMNC-------QMRDISVTARDGRVSHLD 57 Query: 65 MVFIRGDTVTLISTP 79 V+IRG + + P Sbjct: 58 QVYIRGSHIRFLIVP 72 >6OIX-A nrPDB Length = 505 Score = 25.7 bits (55), Expect = 4.7, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 23/53 (43%) Query: 17 YIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESERRCEMVFIR 69 ++L+G R + G L+ + ++ LSD E + + + R + R Sbjct: 398 RLELQGYRVISGLLEIYRPLLSLSLSDFTELVEKERVKRFPIESRLFHKLSTR 450 >6Q70-A nrPDB Length = 394 Score = 25.3 bits (54), Expect = 5.8, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 18/39 (46%) Query: 42 SDAVETIYQLNNEELSESERRCEMVFIRGDTVTLISTPS 80 + E + +N E +S RR +IR + +STP Sbjct: 353 DEVAEMLNTINYEVVSTLSRRIPRFYIRDGEIFKVSTPV 391 >2B3O-A nrPDB Length = 532 Score = 25.3 bits (54), Expect = 6.7, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Query: 16 VYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSE 58 + + G R VG L+ FDS L+D VE + EE S Sbjct: 167 IKVMCEGGRYTVGGLETFDS-----LTDLVEHFKKTGIEEASG 204 >3PS5-A nrPDB Length = 595 Score = 25.3 bits (54), Expect = 7.0, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 5/43 (11%) Query: 16 VYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLNNEELSE 58 + + G R VG L+ FDS L+D VE + EE S Sbjct: 167 IKVMCEGGRYTVGGLETFDS-----LTDLVEHFKKTGIEEASG 204 >6ER0-A nrPDB Length = 127 Score = 24.9 bits (53), Expect = 7.5, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 20/48 (41%) Query: 5 LDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIYQLN 52 L+ + + +V + L R G L + D IV D E + LN Sbjct: 70 LEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILN 117 >2EWN-A nrPDB Length = 321 Score = 24.9 bits (53), Expect = 9.2, Method: Composition-based stats. Identities = 6/37 (16%), Positives = 16/37 (43%), Gaps = 1/37 (2%) Query: 6 DLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLS 42 + L ++ V + + G + + G + D ++L Sbjct: 266 EKLDNFINRPVKLII-GDKEIFGISRGIDKQGALLLE 301 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.316 0.145 0.375 Lambda K H 0.267 0.0433 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,184,510 Number of Sequences: 36641 Number of extensions: 98318 Number of successful extensions: 406 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 269 Number of HSP's gapped (non-prelim): 112 length of query: 89 length of database: 10,336,785 effective HSP length: 58 effective length of query: 31 effective length of database: 8,211,607 effective search space: 254559817 effective search space used: 254559817 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 53 (24.9 bits)