BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P56523
         (687 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

5IKK-A nrPDB                                                         1383   0.0  
5EDU-B nrPDB                                                          302   3e-82
5TD7-A nrPDB                                                          282   3e-76
1C3R-A nrPDB                                                          105   7e-23
4ZUN-A nrPDB                                                          104   1e-22
6G3O-A nrPDB                                                          101   1e-21
4BKX-B nrPDB                                                          100   2e-21
5ICN-B nrPDB                                                          100   3e-21
5D1C-A nrPDB                                                           99   7e-21
3MEN-A nrPDB                                                           98   1e-20
4A69-A nrPDB                                                           94   2e-19
3EXA-A nrPDB                                                           30   5.0  
4ZU2-A nrPDB                                                           29   7.7  

>5IKK-A nrPDB
          Length = 657

 Score = 1383 bits (3579), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 657/657 (100%), Positives = 657/657 (100%)

Query: 31  TNNKPMSGSENTLNNESHEMSQILKKSGLCYDPRMRFHATLSEVDDHPEDPRRVLRVFEA 90
           TNNKPMSGSENTLNNESHEMSQILKKSGLCYDPRMRFHATLSEVDDHPEDPRRVLRVFEA
Sbjct: 1   TNNKPMSGSENTLNNESHEMSQILKKSGLCYDPRMRFHATLSEVDDHPEDPRRVLRVFEA 60

Query: 91  IKKAGYVSNVPSPSDVFLRIPAREATLEELLQVHSQEMYDRVTNTEKMSHEDLANLEKIS 150
           IKKAGYVSNVPSPSDVFLRIPAREATLEELLQVHSQEMYDRVTNTEKMSHEDLANLEKIS
Sbjct: 61  IKKAGYVSNVPSPSDVFLRIPAREATLEELLQVHSQEMYDRVTNTEKMSHEDLANLEKIS 120

Query: 151 DSLYYNNESAFCARLACGSAIETCTAVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNV 210
           DSLYYNNESAFCARLACGSAIETCTAVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNV
Sbjct: 121 DSLYYNNESAFCARLACGSAIETCTAVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNV 180

Query: 211 SVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNY 270
           SVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNY
Sbjct: 181 SVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNY 240

Query: 271 GCAENCGEGPGLGRTVNIPWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAA 330
           GCAENCGEGPGLGRTVNIPWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAA
Sbjct: 241 GCAENCGEGPGLGRTVNIPWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAA 300

Query: 331 GDHIGQFLLTPAAYAHMTQMLMGLADGKVFISLEGGYNLDSISTSALAVAQSLLGIPPGR 390
           GDHIGQFLLTPAAYAHMTQMLMGLADGKVFISLEGGYNLDSISTSALAVAQSLLGIPPGR
Sbjct: 301 GDHIGQFLLTPAAYAHMTQMLMGLADGKVFISLEGGYNLDSISTSALAVAQSLLGIPPGR 360

Query: 391 LHTTYACPQAVATINHVTKIQSQYWRCMRPKHFDANPKDAHVDRLHDVIRTYQAKKLFED 450
           LHTTYACPQAVATINHVTKIQSQYWRCMRPKHFDANPKDAHVDRLHDVIRTYQAKKLFED
Sbjct: 361 LHTTYACPQAVATINHVTKIQSQYWRCMRPKHFDANPKDAHVDRLHDVIRTYQAKKLFED 420

Query: 451 WKITNMPILRDSVSNVFNNQVLCSSNFFQKDNLLVIVHESPRVLGNGTSETNVLNLNDSL 510
           WKITNMPILRDSVSNVFNNQVLCSSNFFQKDNLLVIVHESPRVLGNGTSETNVLNLNDSL
Sbjct: 421 WKITNMPILRDSVSNVFNNQVLCSSNFFQKDNLLVIVHESPRVLGNGTSETNVLNLNDSL 480

Query: 511 LVDPVSLYVEWAMQQDWGLIDINIPEVVTDGENAPVDILSEVKELCLYVWDNYVELSISK 570
           LVDPVSLYVEWAMQQDWGLIDINIPEVVTDGENAPVDILSEVKELCLYVWDNYVELSISK
Sbjct: 481 LVDPVSLYVEWAMQQDWGLIDINIPEVVTDGENAPVDILSEVKELCLYVWDNYVELSISK 540

Query: 571 NIFFIGGGKAVHGLVNLASSRNVSDRVKCMVNFLGTEPLVGLKTASEEDLPTWYYRHSLV 630
           NIFFIGGGKAVHGLVNLASSRNVSDRVKCMVNFLGTEPLVGLKTASEEDLPTWYYRHSLV
Sbjct: 541 NIFFIGGGKAVHGLVNLASSRNVSDRVKCMVNFLGTEPLVGLKTASEEDLPTWYYRHSLV 600

Query: 631 FVSSSNECWKKAKRAKRRYGRLMQSEHTETSDMMEQHYRAVTQYLLHLLQKARPTSQ 687
           FVSSSNECWKKAKRAKRRYGRLMQSEHTETSDMMEQHYRAVTQYLLHLLQKARPTSQ
Sbjct: 601 FVSSSNECWKKAKRAKRRYGRLMQSEHTETSDMMEQHYRAVTQYLLHLLQKARPTSQ 657


>5EDU-B nrPDB
          Length = 745

 Score =  302 bits (774), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 166/365 (45%), Positives = 220/365 (60%), Gaps = 10/365 (2%)

Query: 56  KSGLCYDPRMRFHATLSEVDDHPEDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAREA 115
           ++GL YD  M  H  L +   HPE P+R+LR+   +++ G            L +  R A
Sbjct: 390 RTGLVYDQNMMNHCNLWD-SHHPEVPQRILRIMCRLEELGLAGRC-------LTLTPRPA 441

Query: 116 TLEELLQVHSQEMYDRVTNTEKMSHEDLANLEKISDSLYYNNESAFCARLACGSAIETCT 175
           T  ELL  HS E    +  TEKM   +L       DS+Y    +  CA+LA G+A     
Sbjct: 442 TEAELLTCHSAEYVGHLRATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVE 501

Query: 176 AVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDI 235
           AV++G+V N  AVVRPPGHHAE     GFC FN+V+V AR   Q       R+LIVDWD+
Sbjct: 502 AVLSGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHA-QTISGHALRILIVDWDV 560

Query: 236 HHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSCAGM 295
           HHGNGTQ  F DDP+VLYVSLHRY++G F+P  + G +   G   G G TVN+ W+   M
Sbjct: 561 HHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRM 620

Query: 296 GDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQMLMGLA 355
           GD DY+ A+ R+V+P+AYEF+P+LV+VS GFDAA GD +G   ++P  YAH+T +LMGLA
Sbjct: 621 GDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLA 680

Query: 356 DGKVFISLEGGYNLDSISTSALAVAQSLLGIPPGRLHTTYACPQ-AVATINHVTKIQSQY 414
            G++ + LEGGYNL SIS S  A  +SLLG PP  L         A+A+I    ++  +Y
Sbjct: 681 SGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASITETIQVHRRY 740

Query: 415 WRCMR 419
           WR +R
Sbjct: 741 WRSLR 745


>5TD7-A nrPDB
          Length = 678

 Score =  282 bits (722), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 149/382 (39%), Positives = 218/382 (57%), Gaps = 16/382 (4%)

Query: 57  SGLCYDPRM-RFHATLSEVDDHPEDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAREA 115
           S L +D  M R+    ++     E P R+   +EA++  G      +       +P R+A
Sbjct: 7   SALIFDEEMSRYKLLWTDPACEIEVPERLTVSYEALRTHGLAQRCKA-------VPVRQA 59

Query: 116 TLEELLQVHSQEMYDRVTNTEKMSHEDLANLEKISDSLYYNNESAFCARLACGSAIETCT 175
           T +E+L  HS+E  + V  T  M+ E+L    K  + +Y++     CA+LA G+ ++   
Sbjct: 60  TEQEILLAHSEEYLEAVKQTPGMNVEELMAFSKKYNDVYFHQNIYHCAKLAAGATLQLVD 119

Query: 176 AVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDI 235
           +V+  +V+N  A+VRPPGHH++     GFC+FNNV+  A    + +   + R+LIVDWD+
Sbjct: 120 SVMKREVRNGMALVRPPGHHSQRSAANGFCVFNNVAFAALYAKKNY--NLNRILIVDWDV 177

Query: 236 HHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSCAGM 295
           HHG G Q  F +DP+VLY S HRYE+  F+P        + G+G G G  +N+PW+  GM
Sbjct: 178 HHGQGIQYCFEEDPSVLYFSWHRYEHQSFWPNLPESDYSSVGKGKGSGFNINLPWNKVGM 237

Query: 296 GDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQMLMGLA 355
            + DY+ AF  V++PVAYEFDP+LVIVS GFD+A GD  G+    P  +AH+T +LM LA
Sbjct: 238 TNSDYLAAFFHVLLPVAYEFDPELVIVSAGFDSAIGDPEGEMCALPEIFAHLTHLLMPLA 297

Query: 356 DGKVFISLEGGYNLDSISTSALAVAQSLLGIPPGRLH-TTYACPQAVATINHVTKIQSQY 414
            GK+ + LEGG+NL S+  S      SLLG P  R+     AC  A+ +I +V  +QS Y
Sbjct: 298 AGKMCVVLEGGFNLTSLGQSVCQTVHSLLGDPTPRISGLGTACDSALESIQNVRNVQSSY 357

Query: 415 WRCMRPKHF---DANPKDAHVD 433
           W     KH    + NPK   +D
Sbjct: 358 WSSF--KHLAQSETNPKRPRLD 377



 Score = 40.4 bits (93), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 8/82 (9%)

Query: 300 YIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQMLMGLADGKV 359
           ++ A   +++PVAYEF+P LV+      AA    +         + HMT ++ GLA G++
Sbjct: 563 FMQALLGLILPVAYEFNPALVLGIVEETAAKTRLM-------RVWGHMTCLIQGLARGRM 615

Query: 360 FISLEG-GYNLDSISTSALAVA 380
              L+G   +L  ++ SAL+ A
Sbjct: 616 LTLLQGYDKDLLELTVSALSGA 637


>1C3R-A nrPDB
          Length = 375

 Score =  105 bits (262), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 115/240 (47%), Gaps = 16/240 (6%)

Query: 110 IPAREATLEELLQVHSQEMYDRVTNTEKMSHEDLANLEKISDSLYYN--NESAFC-ARLA 166
           I +R AT EELL  H+++  + +   E+         EK +   Y N  + + F  + LA
Sbjct: 47  IKSRPATKEELLLFHTEDYINTLMEAERSQSVPKGAREKYNIGGYENPVSYAMFTGSSLA 106

Query: 167 CGSAIETCTAVVTGQVKNAFAVVRPPG--HHAEPHKPGGFCLFNNVSVTARSMLQRFPDK 224
            GS ++     + G V        P G  HHA   +  GFC  NN +V    + ++    
Sbjct: 107 TGSTVQAIEEFLKGNV-----AFNPAGGMHHAFKSRANGFCYINNPAVGIEYLRKK---G 158

Query: 225 IKRVLIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGR 284
            KR+L +D D HH +G Q AFYD   V  +SLH+     F      G  E  GEG G G 
Sbjct: 159 FKRILYIDLDAHHCDGVQEAFYDTDQVFVLSLHQSPEYAF--PFEKGFLEEIGEGKGKGY 216

Query: 285 TVNIPWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAY 344
            +NIP    G+ D ++++A ++ +  V   F+P++ ++  G D    D++ +F L+  A+
Sbjct: 217 NLNIPLP-KGLNDNEFLFALEKSLEIVKEVFEPEVYLLQLGTDPLLEDYLSKFNLSNVAF 275


>4ZUN-A nrPDB
          Length = 341

 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 144/338 (42%), Gaps = 56/338 (16%)

Query: 79  EDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAREATLEELLQVHSQEMYDRVTNTEKM 138
           E P R   +  A+K+AG+   V          PAR   LE +L+VH     + +      
Sbjct: 28  EAPFRAEWILAAVKEAGFDDVV---------APARHG-LETVLKVHDAGYLNFLETAWDR 77

Query: 139 SHEDLANLEKISDSL------------------YYNN--ESAF------CARLACGSAIE 172
                   E I+ S                   YY N  E+A        A  +  SAI+
Sbjct: 78  WKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAID 137

Query: 173 TCTAVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVD 232
               +  G  K AF++ RPPGHHA     GG+C  NN +V A+ +L +     K++ I+D
Sbjct: 138 GADLIAAGH-KAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDK---GAKKIAILD 193

Query: 233 WDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSC 292
            D HHGNGTQ  FY+  +V + SLH  +    +P    G AE  G+G G G T N P   
Sbjct: 194 VDFHHGNGTQDIFYERGDVFFASLHG-DPAEAFP-HFLGYAEETGKGAGAGTTANYP--- 248

Query: 293 AGMGDGDYIYAFQRVV---MPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQ 349
             MG G     +   +   +     F  + ++VS G D    D I  F LT   Y  M +
Sbjct: 249 --MGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGR 306

Query: 350 MLMGLADG-KVFISLEGGYNLDSISTSALAVAQSLLGI 386
            +   A G  + + +EGGY +  I    L VA  L G+
Sbjct: 307 TIA--ASGVPLLVVMEGGYGVPEIG---LNVANVLKGV 339


>6G3O-A nrPDB
          Length = 370

 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 119/243 (48%), Gaps = 17/243 (6%)

Query: 114 EATLEELLQVHSQEM--YDRVTNTEKMSH--EDLANLEKISDSLYYNNESAFCARLACGS 169
           +AT EE+ + HS E   + R    + MS   + +       D   ++    FC +L+ G 
Sbjct: 53  KATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFC-QLSTGG 111

Query: 170 AIETCTAVVTGQVKNAFAVVRPPG-HHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRV 228
           ++    AV   + +   AV    G HHA+  +  GFC  N++ +    +L+      +RV
Sbjct: 112 SV--AGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH----QRV 165

Query: 229 LIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNI 288
           L +D DIHHG+G + AFY    V+ VS H+Y  G ++PGT  G   + G G G    VN 
Sbjct: 166 LYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGT--GDLRDIGAGKGKYYAVNF 221

Query: 289 PWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMT 348
           P    G+ D  Y   F+ ++  V   + P  V++ CG D+ +GD +G F LT   +A   
Sbjct: 222 PMR-DGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCV 280

Query: 349 QML 351
           +++
Sbjct: 281 EVV 283


>4BKX-B nrPDB
          Length = 482

 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 21/275 (7%)

Query: 114 EATLEELLQVHSQEM--YDRVTNTEKMSH--EDLANLEKISDSLYYNNESAFCARLACGS 169
           +A  EE+ + HS +   + R    + MS   + +       D   ++    FC +L+ G 
Sbjct: 58  KANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFC-QLSTGG 116

Query: 170 AIETCTAVVTGQVKNAFAVVRPPG-HHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRV 228
           ++   +AV   + +   AV    G HHA+  +  GFC  N++ +    +L+      +RV
Sbjct: 117 SV--ASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH----QRV 170

Query: 229 LIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNI 288
           L +D DIHHG+G + AFY    V+ VS H+Y  G ++PGT  G   + G G G    VN 
Sbjct: 171 LYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGT--GDLRDIGAGKGKYYAVNY 226

Query: 289 PWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMT 348
           P    G+ D  Y   F+ V+  V   F P  V++ CG D+ +GD +G F LT   +A   
Sbjct: 227 PLR-DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCV 285

Query: 349 QMLMGLADGKVFISLEGGYNLDSIS---TSALAVA 380
           + +       + +   GGY + +++   T   AVA
Sbjct: 286 EFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVA 319


>5ICN-B nrPDB
          Length = 376

 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 21/275 (7%)

Query: 114 EATLEELLQVHSQEM--YDRVTNTEKMSH--EDLANLEKISDSLYYNNESAFCARLACGS 169
           +A  EE+ + HS +   + R    + MS   + +       D   ++    FC +L+ G 
Sbjct: 58  KANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFC-QLSTGG 116

Query: 170 AIETCTAVVTGQVKNAFAVVRPPG-HHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRV 228
           ++   +AV   + +   AV    G HHA+  +  GFC  N++ +    +L+      +RV
Sbjct: 117 SV--ASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH----QRV 170

Query: 229 LIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNI 288
           L +D DIHHG+G + AFY    V+ VS H+Y  G ++PGT  G   + G G G    VN 
Sbjct: 171 LYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGT--GDLRDIGAGKGKYYAVNY 226

Query: 289 PWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMT 348
           P    G+ D  Y   F+ V+  V   F P  V++ CG D+ +GD +G F LT   +A   
Sbjct: 227 PLR-DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCV 285

Query: 349 QMLMGLADGKVFISLEGGYNLDSIS---TSALAVA 380
           + +       + +   GGY + +++   T   AVA
Sbjct: 286 EFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVA 319


>5D1C-A nrPDB
          Length = 389

 Score = 98.6 bits (244), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 142/327 (43%), Gaps = 43/327 (13%)

Query: 102 SPSDVFLRIPAREATLEELLQVHSQEMYDRVTNTEKMSHEDLA---------NLEKIS-- 150
           S  D   +IP R + +  L++ ++     R+   +  S E++A         +L+K+S  
Sbjct: 26  SMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQE 85

Query: 151 ------DSLYYN-------NESAFCARLACGSA-IETCTAVVTGQVKNAFAVVRPPG-HH 195
                 DS+ Y         E  F    A G A I     ++ G  K   A+    G HH
Sbjct: 86  GDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCK--VAINWSGGWHH 143

Query: 196 AEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDDPNVLYVS 255
           A+  +  GFC  N+  +     + R   K +R+L VD D+HHG+G + AF     V+ VS
Sbjct: 144 AKKDEASGFCYLNDAVLG----ILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVS 199

Query: 256 LHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSCAGMGDGDYIYAFQRVVMPVAYEF 315
           LH++  G F+PGT  G   + G G G   +VN+P    G+ D  Y    + V+  V   F
Sbjct: 200 LHKFSPG-FFPGT--GDVSDVGLGKGRYYSVNVPIQ-GGIQDEKYYQICESVLKEVYQAF 255

Query: 316 DPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQMLMGLADGKVFISLEGGYNLDSISTS 375
           +P  V++  G D  AGD +  F +TP       + ++      + +   GG+NL + +  
Sbjct: 256 NPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILG-GGGFNLANTARC 314

Query: 376 ALAVAQSLLG------IPPGRLHTTYA 396
              +   +LG      IP     T Y 
Sbjct: 315 WTYLTGVILGKTLSSEIPDHEFFTAYG 341


>3MEN-A nrPDB
          Length = 362

 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 101/194 (52%), Gaps = 13/194 (6%)

Query: 185 AFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMA 244
           A+A+ RPPGHHA     GGFC  NN ++ A+++  R      RV ++D D+HHG G Q  
Sbjct: 168 AYALCRPPGHHARVDAAGGFCYLNNAAIAAQALRARH----ARVAVLDTDMHHGQGIQEI 223

Query: 245 FYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSCAGMGDGDYIYAF 304
           FY   +VLYVS+H  +   FYP    G  +  G G GLG  VN+P      G  +  + F
Sbjct: 224 FYARRDVLYVSIHG-DPTNFYPAVA-GFDDERGAGEGLGYNVNLPMP---HGSSEAAF-F 277

Query: 305 QRV--VMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQMLMGLADGKVFIS 362
           +RV   +     F PD +++S GFD    D   Q  +T   +  +  ++  L    V + 
Sbjct: 278 ERVDDALRELRRFAPDALVLSLGFDVYRDDPQSQVAVTTDGFGRLGHLIGALRLPTVIVQ 337

Query: 363 LEGGYNLDSISTSA 376
            EGGY+++S+  +A
Sbjct: 338 -EGGYHIESLEANA 350


>4A69-A nrPDB
          Length = 376

 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 159/373 (42%), Gaps = 40/373 (10%)

Query: 55  KKSGLCYDPRM-RFHATLSEVDDHPEDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAR 113
           K     YDP +  FH        HP  P R+      +   G    +       +     
Sbjct: 3   KTVAYFYDPDVGNFHYGAG----HPMKPHRLALTHSLVLHYGLYKKM-------IVFKPY 51

Query: 114 EATLEELLQVHSQEMYD---RVTNTEKMSHEDLANLEKISDSL-YYNNESAFCARLACGS 169
           +A+  ++ + HS++  D   RV+ T         N   + D    +     FC+R   G+
Sbjct: 52  QASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYT-GA 110

Query: 170 AIETCTAVVTGQVKNAF---AVVRPPG-HHAEPHKPGGFCLFNNVSVTARSMLQRFPDKI 225
           +++  T     Q+ N     A+    G HHA+  +  GFC  N++ +    +L+  P   
Sbjct: 111 SLQGAT-----QLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHP--- 162

Query: 226 KRVLIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRT 285
            RVL +D DIHHG+G Q AFY    V+ VS H+Y N  F+PGT  G     G   G    
Sbjct: 163 -RVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGN-YFFPGT--GDMYEVGAESGRYYC 218

Query: 286 VNIPWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYA 345
           +N+P    G+ D  Y + FQ V+  V   + P  +++ CG D+   D +G F L+   + 
Sbjct: 219 LNVPLR-DGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHG 277

Query: 346 HMTQMLMGLADGKVFISLEGGYNLDSIS-----TSALAVAQSLLGIPPGRLHTTYACPQA 400
              + +    +  + +   GGY + +++      ++L V +++    P   +  Y  P  
Sbjct: 278 ECVEYVKSF-NIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDF 336

Query: 401 VATINHVTKIQSQ 413
               +  T+I++Q
Sbjct: 337 TLHPDVSTRIENQ 349


>3EXA-A nrPDB
          Length = 322

 Score = 29.6 bits (65), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 27/92 (29%)

Query: 67  FHATLSEVDD------HPEDPRRVLRVFEAIKKAG--------YVSNVPSPSDVFL---- 108
            H  LS++D       HP + RRV+R  E IK  G        +    PSP ++ +    
Sbjct: 139 LHDKLSKIDPKAAAAIHPNNYRRVIRALEIIKLTGKTVTEQARHEEETPSPYNLVMIGLT 198

Query: 109 --------RIPAR-EATLEELLQVHSQEMYDR 131
                   RI  R +  +EE L   ++++YDR
Sbjct: 199 MERDVLYDRINRRVDQMVEEGLIDEAKKLYDR 230


>4ZU2-A nrPDB
          Length = 272

 Score = 28.9 bits (63), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)

Query: 349 QMLMGLADGKVFISLEGGYNLDSISTSALAVAQSLLGIP 387
           Q+L+ L +G V   L GG+ L  +S  A+A A +  G+P
Sbjct: 103 QLLVALVEGAV---LGGGFGLACVSDVAIAAADAQFGLP 138


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

5IKK-A nrPDB                                                         1155   0.0  
5TD7-A nrPDB                                                          470   e-132
5EDU-B nrPDB                                                          444   e-125
4A69-A nrPDB                                                          381   e-106
5ICN-B nrPDB                                                          359   3e-99
4BKX-B nrPDB                                                          359   3e-99
6G3O-A nrPDB                                                          339   2e-93
5D1C-A nrPDB                                                          305   5e-83
4ZUN-A nrPDB                                                          277   1e-74
1C3R-A nrPDB                                                          258   8e-69
3MEN-A nrPDB                                                          207   1e-53

Sequences not found previously or not previously below threshold:

3MJ4-A nrPDB                                                           31   1.4  
4V61-AD nrPDB                                                          29   5.6  
4WMA-A nrPDB                                                           29   5.7  
6BN7-A nrPDB                                                           29   5.8  
3CIN-A nrPDB                                                           29   7.2  


CONVERGED!
>5IKK-A nrPDB
          Length = 657

 Score = 1155 bits (2987), Expect = 0.0,   Method: Composition-based stats.
 Identities = 657/657 (100%), Positives = 657/657 (100%)

Query: 31  TNNKPMSGSENTLNNESHEMSQILKKSGLCYDPRMRFHATLSEVDDHPEDPRRVLRVFEA 90
           TNNKPMSGSENTLNNESHEMSQILKKSGLCYDPRMRFHATLSEVDDHPEDPRRVLRVFEA
Sbjct: 1   TNNKPMSGSENTLNNESHEMSQILKKSGLCYDPRMRFHATLSEVDDHPEDPRRVLRVFEA 60

Query: 91  IKKAGYVSNVPSPSDVFLRIPAREATLEELLQVHSQEMYDRVTNTEKMSHEDLANLEKIS 150
           IKKAGYVSNVPSPSDVFLRIPAREATLEELLQVHSQEMYDRVTNTEKMSHEDLANLEKIS
Sbjct: 61  IKKAGYVSNVPSPSDVFLRIPAREATLEELLQVHSQEMYDRVTNTEKMSHEDLANLEKIS 120

Query: 151 DSLYYNNESAFCARLACGSAIETCTAVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNV 210
           DSLYYNNESAFCARLACGSAIETCTAVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNV
Sbjct: 121 DSLYYNNESAFCARLACGSAIETCTAVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNV 180

Query: 211 SVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNY 270
           SVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNY
Sbjct: 181 SVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNY 240

Query: 271 GCAENCGEGPGLGRTVNIPWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAA 330
           GCAENCGEGPGLGRTVNIPWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAA
Sbjct: 241 GCAENCGEGPGLGRTVNIPWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAA 300

Query: 331 GDHIGQFLLTPAAYAHMTQMLMGLADGKVFISLEGGYNLDSISTSALAVAQSLLGIPPGR 390
           GDHIGQFLLTPAAYAHMTQMLMGLADGKVFISLEGGYNLDSISTSALAVAQSLLGIPPGR
Sbjct: 301 GDHIGQFLLTPAAYAHMTQMLMGLADGKVFISLEGGYNLDSISTSALAVAQSLLGIPPGR 360

Query: 391 LHTTYACPQAVATINHVTKIQSQYWRCMRPKHFDANPKDAHVDRLHDVIRTYQAKKLFED 450
           LHTTYACPQAVATINHVTKIQSQYWRCMRPKHFDANPKDAHVDRLHDVIRTYQAKKLFED
Sbjct: 361 LHTTYACPQAVATINHVTKIQSQYWRCMRPKHFDANPKDAHVDRLHDVIRTYQAKKLFED 420

Query: 451 WKITNMPILRDSVSNVFNNQVLCSSNFFQKDNLLVIVHESPRVLGNGTSETNVLNLNDSL 510
           WKITNMPILRDSVSNVFNNQVLCSSNFFQKDNLLVIVHESPRVLGNGTSETNVLNLNDSL
Sbjct: 421 WKITNMPILRDSVSNVFNNQVLCSSNFFQKDNLLVIVHESPRVLGNGTSETNVLNLNDSL 480

Query: 511 LVDPVSLYVEWAMQQDWGLIDINIPEVVTDGENAPVDILSEVKELCLYVWDNYVELSISK 570
           LVDPVSLYVEWAMQQDWGLIDINIPEVVTDGENAPVDILSEVKELCLYVWDNYVELSISK
Sbjct: 481 LVDPVSLYVEWAMQQDWGLIDINIPEVVTDGENAPVDILSEVKELCLYVWDNYVELSISK 540

Query: 571 NIFFIGGGKAVHGLVNLASSRNVSDRVKCMVNFLGTEPLVGLKTASEEDLPTWYYRHSLV 630
           NIFFIGGGKAVHGLVNLASSRNVSDRVKCMVNFLGTEPLVGLKTASEEDLPTWYYRHSLV
Sbjct: 541 NIFFIGGGKAVHGLVNLASSRNVSDRVKCMVNFLGTEPLVGLKTASEEDLPTWYYRHSLV 600

Query: 631 FVSSSNECWKKAKRAKRRYGRLMQSEHTETSDMMEQHYRAVTQYLLHLLQKARPTSQ 687
           FVSSSNECWKKAKRAKRRYGRLMQSEHTETSDMMEQHYRAVTQYLLHLLQKARPTSQ
Sbjct: 601 FVSSSNECWKKAKRAKRRYGRLMQSEHTETSDMMEQHYRAVTQYLLHLLQKARPTSQ 657


>5TD7-A nrPDB
          Length = 678

 Score =  470 bits (1208), Expect = e-132,   Method: Composition-based stats.
 Identities = 149/382 (39%), Positives = 218/382 (57%), Gaps = 16/382 (4%)

Query: 57  SGLCYDPRM-RFHATLSEVDDHPEDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAREA 115
           S L +D  M R+    ++     E P R+   +EA++  G      +       +P R+A
Sbjct: 7   SALIFDEEMSRYKLLWTDPACEIEVPERLTVSYEALRTHGLAQRCKA-------VPVRQA 59

Query: 116 TLEELLQVHSQEMYDRVTNTEKMSHEDLANLEKISDSLYYNNESAFCARLACGSAIETCT 175
           T +E+L  HS+E  + V  T  M+ E+L    K  + +Y++     CA+LA G+ ++   
Sbjct: 60  TEQEILLAHSEEYLEAVKQTPGMNVEELMAFSKKYNDVYFHQNIYHCAKLAAGATLQLVD 119

Query: 176 AVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDI 235
           +V+  +V+N  A+VRPPGHH++     GFC+FNNV+  A    + +   + R+LIVDWD+
Sbjct: 120 SVMKREVRNGMALVRPPGHHSQRSAANGFCVFNNVAFAALYAKKNY--NLNRILIVDWDV 177

Query: 236 HHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSCAGM 295
           HHG G Q  F +DP+VLY S HRYE+  F+P        + G+G G G  +N+PW+  GM
Sbjct: 178 HHGQGIQYCFEEDPSVLYFSWHRYEHQSFWPNLPESDYSSVGKGKGSGFNINLPWNKVGM 237

Query: 296 GDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQMLMGLA 355
            + DY+ AF  V++PVAYEFDP+LVIVS GFD+A GD  G+    P  +AH+T +LM LA
Sbjct: 238 TNSDYLAAFFHVLLPVAYEFDPELVIVSAGFDSAIGDPEGEMCALPEIFAHLTHLLMPLA 297

Query: 356 DGKVFISLEGGYNLDSISTSALAVAQSLLGIPPGRLH-TTYACPQAVATINHVTKIQSQY 414
            GK+ + LEGG+NL S+  S      SLLG P  R+     AC  A+ +I +V  +QS Y
Sbjct: 298 AGKMCVVLEGGFNLTSLGQSVCQTVHSLLGDPTPRISGLGTACDSALESIQNVRNVQSSY 357

Query: 415 WRCMRPKHF---DANPKDAHVD 433
           W     KH    + NPK   +D
Sbjct: 358 WSSF--KHLAQSETNPKRPRLD 377



 Score = 36.7 bits (83), Expect = 0.037,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 11/120 (9%)

Query: 300 YIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQMLMGLADGKV 359
           ++ A   +++PVAYEF+P  +++    + AA   +         + HMT ++ GLA G++
Sbjct: 563 FMQALLGLILPVAYEFNP-ALVLGIVEETAAKTRL------MRVWGHMTCLIQGLARGRM 615

Query: 360 FISLEGGYNLDSISTSALAVAQSLLGIPPGRLHTTYACPQAVATINHVTKIQSQYWRCMR 419
              L+ GY+ D +  +  A++ + +             P+ V  +    +   + W  +R
Sbjct: 616 LTLLQ-GYDKDLLELTVSALSGASISPLGP---LRAPKPEDVEMMEKQRQRLQERWGLLR 671


>5EDU-B nrPDB
          Length = 745

 Score =  444 bits (1142), Expect = e-125,   Method: Composition-based stats.
 Identities = 166/365 (45%), Positives = 220/365 (60%), Gaps = 10/365 (2%)

Query: 56  KSGLCYDPRMRFHATLSEVDDHPEDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAREA 115
           ++GL YD  M  H  L +   HPE P+R+LR+   +++ G            L +  R A
Sbjct: 390 RTGLVYDQNMMNHCNLWD-SHHPEVPQRILRIMCRLEELGLAGRC-------LTLTPRPA 441

Query: 116 TLEELLQVHSQEMYDRVTNTEKMSHEDLANLEKISDSLYYNNESAFCARLACGSAIETCT 175
           T  ELL  HS E    +  TEKM   +L       DS+Y    +  CA+LA G+A     
Sbjct: 442 TEAELLTCHSAEYVGHLRATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVE 501

Query: 176 AVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDI 235
           AV++G+V N  AVVRPPGHHAE     GFC FN+V+V AR   Q       R+LIVDWD+
Sbjct: 502 AVLSGEVLNGAAVVRPPGHHAEQDAACGFCFFNSVAVAARHA-QTISGHALRILIVDWDV 560

Query: 236 HHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSCAGM 295
           HHGNGTQ  F DDP+VLYVSLHRY++G F+P  + G +   G   G G TVN+ W+   M
Sbjct: 561 HHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRM 620

Query: 296 GDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQMLMGLA 355
           GD DY+ A+ R+V+P+AYEF+P+LV+VS GFDAA GD +G   ++P  YAH+T +LMGLA
Sbjct: 621 GDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLA 680

Query: 356 DGKVFISLEGGYNLDSISTSALAVAQSLLGIPPGRLHTTYACPQ-AVATINHVTKIQSQY 414
            G++ + LEGGYNL SIS S  A  +SLLG PP  L         A+A+I    ++  +Y
Sbjct: 681 SGRIILILEGGYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASITETIQVHRRY 740

Query: 415 WRCMR 419
           WR +R
Sbjct: 741 WRSLR 745


>4A69-A nrPDB
          Length = 376

 Score =  381 bits (977), Expect = e-106,   Method: Composition-based stats.
 Identities = 90/370 (24%), Positives = 153/370 (41%), Gaps = 34/370 (9%)

Query: 55  KKSGLCYDPRM-RFHATLSEVDDHPEDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAR 113
           K     YDP +  FH        HP  P R+      +   G    +       +     
Sbjct: 3   KTVAYFYDPDVGNFHYGAG----HPMKPHRLALTHSLVLHYGLYKKM-------IVFKPY 51

Query: 114 EATLEELLQVHSQEMYD---RVTNTEKMSHEDLAN-LEKISDSLYYNNESAFCARLACGS 169
           +A+  ++ + HS++  D   RV+ T         N      D   +     FC+R   G+
Sbjct: 52  QASQHDMCRFHSEDYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRY-TGA 110

Query: 170 AIETCTAVVTGQVKNAFAVVRPPG-HHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRV 228
           +++  T +         A+    G HHA+  +  GFC  N++ +    +L+  P    RV
Sbjct: 111 SLQGATQL--NNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHP----RV 164

Query: 229 LIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNI 288
           L +D DIHHG+G Q AFY    V+ VS H+Y N  F+PGT  G     G   G    +N+
Sbjct: 165 LYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNY-FFPGT--GDMYEVGAESGRYYCLNV 221

Query: 289 PWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMT 348
           P    G+ D  Y + FQ V+  V   + P  +++ CG D+   D +G F L+   +    
Sbjct: 222 PLR-DGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECV 280

Query: 349 QMLMGLADGKVFISLEGGYNLDSISTSALA-----VAQSLLGIPPGRLHTTYACPQAVAT 403
           + +    +  + +   GGY + +++          V +++    P   +  Y  P     
Sbjct: 281 EYVKSF-NIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLH 339

Query: 404 INHVTKIQSQ 413
            +  T+I++Q
Sbjct: 340 PDVSTRIENQ 349


>5ICN-B nrPDB
          Length = 376

 Score =  359 bits (920), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 94/391 (24%), Positives = 159/391 (40%), Gaps = 38/391 (9%)

Query: 55  KKSGLCYDPRM-RFHATLSEVDDHPEDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAR 113
           +K    YD  +  ++        HP  P R+      +   G    +             
Sbjct: 9   RKVCYYYDGDVGNYYYGQG----HPMKPHRIRMTHNLLLNYGLYRKME-------IYRPH 57

Query: 114 EATLEELLQVHSQEM--YDRVTNTEKMSH--EDLANLEKISDSLYYNNESAFCARLACGS 169
           +A  EE+ + HS +   + R    + MS   + +       D   ++    FC +L+ G 
Sbjct: 58  KANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFC-QLSTGG 116

Query: 170 AIETCTAVVTGQVKNAFAVVRPPG-HHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRV 228
           ++   +AV   + +   AV    G HHA+  +  GFC  N++ +    +L+      +RV
Sbjct: 117 SV--ASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH----QRV 170

Query: 229 LIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNI 288
           L +D DIHHG+G + AFY    V+ VS H+Y  G ++PGT  G   + G G G    VN 
Sbjct: 171 LYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGT--GDLRDIGAGKGKYYAVNY 226

Query: 289 PWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMT 348
           P    G+ D  Y   F+ V+  V   F P  V++ CG D+ +GD +G F LT   +A   
Sbjct: 227 PLR-DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCV 285

Query: 349 QMLMGLADGKVFISLEGGYNLDSISTSALAVAQSLL-----GIPPGRLHTTYACPQAVAT 403
           + +       + +   GGY + +++          L        P   +  Y  P     
Sbjct: 286 EFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLH 344

Query: 404 I---NHVTKIQSQYWRCMRPKHFDANPKDAH 431
           I   N   +  ++Y   ++ + F+      H
Sbjct: 345 ISPSNMTNQNTNEYLEKIKQRLFENLRMLPH 375


>4BKX-B nrPDB
          Length = 482

 Score =  359 bits (920), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 94/391 (24%), Positives = 159/391 (40%), Gaps = 38/391 (9%)

Query: 55  KKSGLCYDPRM-RFHATLSEVDDHPEDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAR 113
           +K    YD  +  ++        HP  P R+      +   G    +             
Sbjct: 9   RKVCYYYDGDVGNYYYGQG----HPMKPHRIRMTHNLLLNYGLYRKME-------IYRPH 57

Query: 114 EATLEELLQVHSQEM--YDRVTNTEKMSH--EDLANLEKISDSLYYNNESAFCARLACGS 169
           +A  EE+ + HS +   + R    + MS   + +       D   ++    FC +L+ G 
Sbjct: 58  KANAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFC-QLSTGG 116

Query: 170 AIETCTAVVTGQVKNAFAVVRPPG-HHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRV 228
           ++   +AV   + +   AV    G HHA+  +  GFC  N++ +    +L+      +RV
Sbjct: 117 SV--ASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH----QRV 170

Query: 229 LIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNI 288
           L +D DIHHG+G + AFY    V+ VS H+Y  G ++PGT  G   + G G G    VN 
Sbjct: 171 LYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGT--GDLRDIGAGKGKYYAVNY 226

Query: 289 PWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMT 348
           P    G+ D  Y   F+ V+  V   F P  V++ CG D+ +GD +G F LT   +A   
Sbjct: 227 PLR-DGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCV 285

Query: 349 QMLMGLADGKVFISLEGGYNLDSISTSALAVAQSLL-----GIPPGRLHTTYACPQAVAT 403
           + +       + +   GGY + +++          L        P   +  Y  P     
Sbjct: 286 EFVKSFNLPMLMLG-GGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLH 344

Query: 404 I---NHVTKIQSQYWRCMRPKHFDANPKDAH 431
           I   N   +  ++Y   ++ + F+      H
Sbjct: 345 ISPSNMTNQNTNEYLEKIKQRLFENLRMLPH 375


>6G3O-A nrPDB
          Length = 370

 Score =  339 bits (869), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 94/391 (24%), Positives = 158/391 (40%), Gaps = 38/391 (9%)

Query: 55  KKSGLCYDPRM-RFHATLSEVDDHPEDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAR 113
           KK    YD  +  ++        HP  P R+      +   G    +             
Sbjct: 4   KKVCYYYDGDIGNYYYGQG----HPMKPHRIRMTHNLLLNYGLYRKME-------IYRPH 52

Query: 114 EATLEELLQVHSQEM--YDRVTNTEKMSH--EDLANLEKISDSLYYNNESAFCARLACGS 169
           +AT EE+ + HS E   + R    + MS   + +       D   ++    FC +L+ G 
Sbjct: 53  KATAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFC-QLSTGG 111

Query: 170 AIETCTAVVTGQVKNAFAVVRPPG-HHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRV 228
           ++    AV   + +   AV    G HHA+  +  GFC  N++ +    +L+      +RV
Sbjct: 112 SV--AGAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYH----QRV 165

Query: 229 LIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNI 288
           L +D DIHHG+G + AFY    V+ VS H+Y  G ++PGT  G   + G G G    VN 
Sbjct: 166 LYIDIDIHHGDGVEEAFYTTDRVMTVSFHKY--GEYFPGT--GDLRDIGAGKGKYYAVNF 221

Query: 289 PWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMT 348
           P    G+ D  Y   F+ ++  V   + P  V++ CG D+ +GD +G F LT   +A   
Sbjct: 222 PMR-DGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCV 280

Query: 349 QMLMGLADGKVFISLEGGYNLDSISTSALAVAQSLL-----GIPPGRLHTTYACPQAVAT 403
           +++       + +    GY + +++          L        P   +  Y  P     
Sbjct: 281 EVVKTFNLPLLMLGGG-GYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLH 339

Query: 404 I---NHVTKIQSQYWRCMRPKHFDANPKDAH 431
           I   N   +   +Y   ++ + F+      H
Sbjct: 340 ISPSNMTNQNTPEYMEKIKQRLFENLRMLPH 370


>5D1C-A nrPDB
          Length = 389

 Score =  305 bits (781), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 93/365 (25%), Positives = 151/365 (41%), Gaps = 46/365 (12%)

Query: 77  HPEDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAREATLEELLQVHSQEMYDRVTNTE 136
            PE+P         +    Y     S  D   +IP R + +  L++ ++     R+   +
Sbjct: 3   EPEEP--ADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPK 60

Query: 137 KMSHEDL---------ANLEKIS--------DSLYYN-------NESAFCARLACGSA-I 171
             S E++          +L+K+S        DS+ Y         E  F    A G A I
Sbjct: 61  VASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATI 120

Query: 172 ETCTAVVTGQVKNAFAVVRPPG-HHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLI 230
                ++ G  K   A+    G HHA+  +  GFC  N+  +    + ++     +R+L 
Sbjct: 121 TAAQCLIDGMCK--VAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRK----FERILY 174

Query: 231 VDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPW 290
           VD D+HHG+G + AF     V+ VSLH++  G F+PGT  G   + G G G   +VN+P 
Sbjct: 175 VDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG-FFPGT--GDVSDVGLGKGRYYSVNVPI 231

Query: 291 SCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQM 350
              G+ D  Y    + V+  V   F+P  V++  G D  AGD +  F +TP       + 
Sbjct: 232 QG-GIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKY 290

Query: 351 LMGLADGKVFISLEGGYNLDSISTSALAVAQSLLG------IPPGRLHTTYACPQAVATI 404
           ++      + +   GG+NL + +     +   +LG      IP     T Y  P  V  I
Sbjct: 291 ILQWQLATLILG-GGGFNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYG-PDYVLEI 348

Query: 405 NHVTK 409
               +
Sbjct: 349 TPSCR 353


>4ZUN-A nrPDB
          Length = 341

 Score =  277 bits (708), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 98/337 (29%), Positives = 141/337 (41%), Gaps = 54/337 (16%)

Query: 79  EDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAREATLEELLQVHSQEMYDRVTNTEKM 138
           E P R   +  A+K+AG+   V          PAR   LE +L+VH     + +      
Sbjct: 28  EAPFRAEWILAAVKEAGFDDVV---------APARHG-LETVLKVHDAGYLNFLETAWDR 77

Query: 139 SHEDLANLEKISDSL------------------YYNNESAFC--------ARLACGSAIE 172
                   E I+ S                   YY N +           A  +  SAI+
Sbjct: 78  WKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAID 137

Query: 173 TCTAVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVD 232
               +  G  K AF++ RPPGHHA     GG+C  NN +V A+ +L +     K++ I+D
Sbjct: 138 GADLIAAGH-KAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDK---GAKKIAILD 193

Query: 233 WDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSC 292
            D HHGNGTQ  FY+  +V + SLH  +    +P    G AE  G+G G G T N P   
Sbjct: 194 VDFHHGNGTQDIFYERGDVFFASLHG-DPAEAFP-HFLGYAEETGKGAGAGTTANYP--- 248

Query: 293 AGMGDGDYIYAFQRVV---MPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQ 349
             MG G     +   +   +     F  + ++VS G D    D I  F LT   Y  M +
Sbjct: 249 --MGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISFFKLTSPDYITMGR 306

Query: 350 MLMGLADGKVFISLEGGYNLDSISTSALAVAQSLLGI 386
            +   +   + + +EGGY +  I    L VA  L G+
Sbjct: 307 TIAA-SGVPLLVVMEGGYGVPEIG---LNVANVLKGV 339


>1C3R-A nrPDB
          Length = 375

 Score =  258 bits (658), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 77/283 (27%), Positives = 125/283 (44%), Gaps = 23/283 (8%)

Query: 74  VDDHPEDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAREATLEELLQVHSQEMYDRVT 133
             +HP    RV  +           +  +  D    I +R AT EELL  H+++  + + 
Sbjct: 18  PKNHPLKIPRVSLLLR-------FKDAMNLIDEKELIKSRPATKEELLLFHTEDYINTLM 70

Query: 134 NTEKMSHEDLANLEKISDSLYYNN--ESAFC-ARLACGSAIETCTAVVTGQVKNAFAVVR 190
             E+         EK +   Y N    + F  + LA GS ++     + G V        
Sbjct: 71  EAERSQSVPKGAREKYNIGGYENPVSYAMFTGSSLATGSTVQAIEEFLKGNV-----AFN 125

Query: 191 PPG--HHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDD 248
           P G  HHA   +  GFC  NN +V    + ++     KR+L +D D HH +G Q AFYD 
Sbjct: 126 PAGGMHHAFKSRANGFCYINNPAVGIEYLRKK---GFKRILYIDLDAHHCDGVQEAFYDT 182

Query: 249 PNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSCAGMGDGDYIYAFQRVV 308
             V  +SLH+     F      G  E  GEG G G  +NIP    G+ D ++++A ++ +
Sbjct: 183 DQVFVLSLHQSPEYAF--PFEKGFLEEIGEGKGKGYNLNIPLPK-GLNDNEFLFALEKSL 239

Query: 309 MPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQML 351
             V   F+P++ ++  G D    D++ +F L+  A+     ++
Sbjct: 240 EIVKEVFEPEVYLLQLGTDPLLEDYLSKFNLSNVAFLKAFNIV 282


>3MEN-A nrPDB
          Length = 362

 Score =  207 bits (526), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 89/324 (27%), Positives = 132/324 (40%), Gaps = 48/324 (14%)

Query: 79  EDPRRVLRVFEAIKKAGYVSNVPSPSDVFLRIPAREATLEELLQVHSQEMYDRVTN---- 134
           E P R  R+  A    G+    P   D F   P        +  VH       +      
Sbjct: 49  EVPERAARLVAAAFAMGFPVREP---DDFGIAP--------IAAVHDTHYLRFLETVHRE 97

Query: 135 ----TEKMSHEDLANLEKISDSLYYNNESAFCARLACGS----------------AIETC 174
                E    E ++N+     +      +     LA GS                +    
Sbjct: 98  WKAMPEDWGDEAMSNIFVREPNALRGVLAQAARHLADGSCPVGEHTWRAAYWSAQSALAA 157

Query: 175 TAVVTGQVKNAFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWD 234
            A V      A+A+ RPPGHHA     GGFC  NN ++ A+++  R      RV ++D D
Sbjct: 158 AAAVRDGAPAAYALCRPPGHHARVDAAGGFCYLNNAAIAAQALRARH----ARVAVLDTD 213

Query: 235 IHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSCAG 294
           +HHG G Q  FY   +VLYVS+H  +   FYP    G  +  G G GLG  VN+P     
Sbjct: 214 MHHGQGIQEIFYARRDVLYVSIHG-DPTNFYPAVA-GFDDERGAGEGLGYNVNLPMP--- 268

Query: 295 MGDGDYIYAFQRV--VMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQMLM 352
            G  +  + F+RV   +     F PD +++S GFD    D   Q  +T   +  +  ++ 
Sbjct: 269 HGSSEAAF-FERVDDALRELRRFAPDALVLSLGFDVYRDDPQSQVAVTTDGFGRLGHLIG 327

Query: 353 GLADGKVFISLEGGYNLDSISTSA 376
            L    V +  EGGY+++S+  +A
Sbjct: 328 ALRLPTVIVQ-EGGYHIESLEANA 350


>3MJ4-A nrPDB
          Length = 397

 Score = 31.3 bits (69), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 25/69 (36%), Gaps = 5/69 (7%)

Query: 197 EPHKPGGFCL-FNNVSVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDDPNVLYVS 255
           E  +  GF             + +R     +RVLIVD   H G       YDD  VL   
Sbjct: 23  EQQESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDC-YDDAGVL--- 78

Query: 256 LHRYENGRF 264
           +H Y    F
Sbjct: 79  IHPYGPHIF 87


>4V61-AD nrPDB
          Length = 201

 Score = 29.3 bits (64), Expect = 5.6,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 30 LTNNKPMSGSENTLNNESHEMSQILKKSGLCYDPRMRFHATLSE 73
          LTN +P +GS+  L N+S    +   +  L    ++RFH  ++E
Sbjct: 21 LTNKRPRAGSD--LRNQSRSGKRSQYRIRLEEKQKLRFHYGITE 62


>4WMA-A nrPDB
          Length = 306

 Score = 29.3 bits (64), Expect = 5.7,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 13/78 (16%)

Query: 199 HKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDDPNVLYVSLHR 258
               G    +++   + +M Q  P +I R++ +D D+ +    +  F +  N        
Sbjct: 106 SAGSGTYYSDSIFFLSVAMHQIMPKEIPRIIQLDLDLKYKTNIRELFEEFDN-------- 157

Query: 259 YENGRFYPGTNYGCAENC 276
                F PG   G A   
Sbjct: 158 -----FLPGAVIGIAREM 170


>6BN7-A nrPDB
          Length = 864

 Score = 29.3 bits (64), Expect = 5.8,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 59/175 (33%), Gaps = 17/175 (9%)

Query: 324 CGFDAAAGDHIGQFLLTPAAYAHMTQMLMGLADGKVFISLEGGYNLDSISTSALAVAQSL 383
           C  D+AA     +  L      H+ + +     G + +   G  +  +  +        +
Sbjct: 701 CQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGM 760

Query: 384 LGIPPGRLHTTYACPQAVAT-----INHVTKIQSQYWRCMRPKHFDANPKDAHVDRLHDV 438
           +G+      + Y     +       I  V KI+  +WR    +     P    +D     
Sbjct: 761 IGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER-KTEPATGFID----- 814

Query: 439 IRTYQAKKLFEDWKITNMPILRDSVSNVFNNQVLCSSNFFQKDNLLVIVHESPRV 493
                   L E +   + P +++ V+N+  +           D+L+ +V E  R+
Sbjct: 815 ------GDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRI 863


>3CIN-A nrPDB
          Length = 394

 Score = 29.0 bits (63), Expect = 7.2,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%)

Query: 275 NCGEGPGLGRTVNIPWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAA 329
              +G  LG   N+P    G+ D   +      ++    E DPD+++ +C  +A 
Sbjct: 94  EIRKGVHLGSVRNLPIEAEGLEDSMTLKEAVDTLVKEWTELDPDVIVNTCTTEAF 148


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.313    0.126    0.347 

Lambda     K      H
   0.267   0.0391    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,045,846
Number of Sequences: 36641
Number of extensions: 1050106
Number of successful extensions: 2687
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2568
Number of HSP's gapped (non-prelim): 34
length of query: 687
length of database: 10,336,785
effective HSP length: 104
effective length of query: 583
effective length of database: 6,526,121
effective search space: 3804728543
effective search space used: 3804728543
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 62 (28.6 bits)