BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P56282 (527 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5VBN-A nrPDB 1091 0.0 6HV9-B nrPDB 177 1e-44 5EXR-D nrPDB 43 3e-04 4YFA-A nrPDB 31 1.1 5C9I-A nrPDB 31 1.5 3NRK-A nrPDB 28 9.2 >5VBN-A nrPDB Length = 527 Score = 1091 bits (2821), Expect = 0.0, Method: Compositional matrix adjust. Identities = 527/527 (100%), Positives = 527/527 (100%) Query: 1 MAPERLRSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIINAVEKQPLSSN 60 MAPERLRSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIINAVEKQPLSSN Sbjct: 1 MAPERLRSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIINAVEKQPLSSN 60 Query: 61 MIERSVVEAAVQECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHPAPNLF 120 MIERSVVEAAVQECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHPAPNLF Sbjct: 61 MIERSVVEAAVQECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHPAPNLF 120 Query: 121 GTPRDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGSTTKIGD 180 GTPRDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGSTTKIGD Sbjct: 121 GTPRDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGSTTKIGD 180 Query: 181 AIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEGWFEDQVFHVNAF 240 AIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEGWFEDQVFHVNAF Sbjct: 181 AIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEGWFEDQVFHVNAF 240 Query: 241 GFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVWLDQVEV 300 GFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVWLDQVEV Sbjct: 241 GFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVWLDQVEV 300 Query: 301 LEKLRIMFAGYSPAPPTCFILCGNFSSAPYGKNQVQALKDSLKTLADIICEYPDIHQSSR 360 LEKLRIMFAGYSPAPPTCFILCGNFSSAPYGKNQVQALKDSLKTLADIICEYPDIHQSSR Sbjct: 301 LEKLRIMFAGYSPAPPTCFILCGNFSSAPYGKNQVQALKDSLKTLADIICEYPDIHQSSR 360 Query: 361 FVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQYCTQEITVFREDLV 420 FVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQYCTQEITVFREDLV Sbjct: 361 FVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQYCTQEITVFREDLV 420 Query: 421 NKMCRNCVRFPSSNLAIPNHFVKTILSQGHLTPLPLYVCPVYWAYDYALRVYPVPDLLVI 480 NKMCRNCVRFPSSNLAIPNHFVKTILSQGHLTPLPLYVCPVYWAYDYALRVYPVPDLLVI Sbjct: 421 NKMCRNCVRFPSSNLAIPNHFVKTILSQGHLTPLPLYVCPVYWAYDYALRVYPVPDLLVI 480 Query: 481 ADKYDPFTTTNTECLCINPGSFPRSGFSFKVFYPSNKTVEDSKLQGF 527 ADKYDPFTTTNTECLCINPGSFPRSGFSFKVFYPSNKTVEDSKLQGF Sbjct: 481 ADKYDPFTTTNTECLCINPGSFPRSGFSFKVFYPSNKTVEDSKLQGF 527 >6HV9-B nrPDB Length = 689 Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 138/512 (26%), Positives = 228/512 (44%), Gaps = 88/512 (17%) Query: 73 ECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHPAPNLFGTP------RDK 126 E S+++D F +I A RF YN + +F+ + N L G DK Sbjct: 159 ESSKALD--WRDYFKVINASQQQRFSYNPHKMQFI--FVPNKKQNGLGGIAGFLPDIEDK 214 Query: 127 AEMFRERYTILHQRTHRHE------LFTP---------PVIGSHPDESGSKFQLKTIETL 171 +MF RY + + R R+E +F P + ++ + S + I+ L Sbjct: 215 VQMFLTRYYLTNDRVMRNENFQNSDMFNPLSSMVSLQNELSNTNRQQQSSSNSITPIKNL 274 Query: 172 LGSTTKIGDAIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSG-LYTEACFVLAEGWF 230 LG + + ++LG++ + +G + LEDP+G+V++D+S+ G Y C VL EG + Sbjct: 275 LGRDAQ--NFLLLGLLNKNFKGNWSLEDPSGSVEIDISQTIPTQGHYYVPGCMVLVEGIY 332 Query: 231 ED--QVFHVNAFGFPPTEPSSTTRAYYGNINFFG--GPSNTSV------KTSAKLKQLEE 280 FHV + PP E T GN++ G G SN + +L LE+ Sbjct: 333 YSVGNKFHVTSMTLPPGERREITLETIGNLDLLGIHGISNNNFIARLDKDLKIRLHLLEK 392 Query: 281 ENKDAMFVFL-SDVWLDQVEVLEKLRIMFAGYSPAPPTCFILCGNFSSAPY-------GK 332 E D FV L ++++LD ++++ L + + PPT I G+F+S P Sbjct: 393 ELTDHKFVILGANLFLDDLKIMTALSKILQKLNDDPPTLLIWQGSFTSVPVFASMSSRNI 452 Query: 333 NQVQALKDSLKTLADIICEYPDIHQSSRFVFVPGPEDP-------GFGSILPRPPLAESI 385 + K++ LA ++ + ++ +++ +F+PGP D G LP+ P+ + Sbjct: 453 SSSTQFKNNFDALATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGASGTLPQDPIPSAF 512 Query: 386 TNEFRQRVPFSVFTTNPCRIQYCTQEITVFREDLVNKMCRNCVRFP---SSNLAIPN--- 439 T + + V+++NP RI Y +QEI +FR+DL + R+ + FP S ++ N Sbjct: 513 TKKINKVCKNVVWSSNPTRIAYLSQEIVIFRDDLSGRFKRHRLEFPFNESEDVYTENDNM 572 Query: 440 ----------------------------HFVKTILSQGHLTPLPLYVCPVYWAYDYALRV 471 VKTIL QGHL+P + P+ W D+ L + Sbjct: 573 MSKDTDIVPIDELVKEPDQLPQKVQETRKLVKTILDQGHLSPFLDSLRPISWDLDHTLTL 632 Query: 472 YPVPDLLVIADKYDP-FTTTNTECLCINPGSF 502 P+P +V+ D F T C INPGSF Sbjct: 633 CPIPSTMVLCDTTSAQFDLTYNGCKVINPGSF 664 >5EXR-D nrPDB Length = 597 Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 9/161 (5%) Query: 359 SRFVFVPGPEDPGFGSILPRPPLAES-ITNEFRQRVPFSVFTTNPCRIQYCTQEITVFRE 417 S VFVP D + P+PP + S ++ E +++V F + PC + + Sbjct: 417 SHLVFVPSLRDVHHEPVYPQPPFSYSDLSREDKKQVQF---VSEPCSLSINGVIFGLTST 473 Query: 418 DLVNKMCRNCVRFPSSNLAIPNHFVKTILSQGHLTPL--PLYVCPVYWAYDYALRVYPV- 474 DL+ + + S + +K IL+Q PL P + + Y PV Sbjct: 474 DLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDMAIDYESFYVYAQLPVT 533 Query: 475 PDLLVIADKYDPFTTTNTECLCINPGSFPRS--GFSFKVFY 513 PD+L+I + F C+C+NPG + G +F Y Sbjct: 534 PDVLIIPSELRYFVKDVLGCVCVNPGRLTKGQVGGTFARLY 574 >4YFA-A nrPDB Length = 178 Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 8/73 (10%) Query: 320 ILCGNFSSAPYGKNQVQALKDSLKTLADIICEYPDIHQSSRFVFVPGPEDPGFGSILPRP 379 I GN+ SA YG VQA +D+L T+AD Y + R + G + S L RP Sbjct: 23 IKAGNWGSAGYGFGYVQA-QDNLCTMADSFLTY----RGERSRHLGGSAQLVYNSTLGRP 77 Query: 380 PLAESITNEFRQR 392 +I ++F R Sbjct: 78 ---RNIDSDFFHR 87 >5C9I-A nrPDB Length = 779 Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 8/73 (10%) Query: 320 ILCGNFSSAPYGKNQVQALKDSLKTLADIICEYPDIHQSSRFVFVPGPEDPGFGSILPRP 379 I GN+ SA YG VQA +D+L T+AD Y + R + G + S L RP Sbjct: 23 IKAGNWGSAGYGFGYVQA-QDNLCTMADSFLTY----RGERSRHLGGSAQLVYNSTLGRP 77 Query: 380 PLAESITNEFRQR 392 +I ++F R Sbjct: 78 ---RNIDSDFFHR 87 >3NRK-A nrPDB Length = 325 Score = 28.1 bits (61), Expect = 9.2, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 20/100 (20%) Query: 35 SISELELEDKLEKIINAVEKQPLSSN------------MIERSVVEAAVQECS-----QS 77 SISEL+L+D EK N ++K + +I+R++V+ +E S Q Sbjct: 24 SISELDLDDATEK-YNRLQKHLKHEDYRKSFRTRIIDFLIDRAIVDVVAEEESIQVNEQR 82 Query: 78 VDETIEHVFNIIGAFDIPRFVYNSERKKFLP--LLMTNHP 115 VD IE ++G + +F E +P L +T P Sbjct: 83 VDSEIEKRMEVMGITNRKQFEKTMETSSGMPFELWVTELP 122 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5VBN-A nrPDB 915 0.0 6HV9-B nrPDB 588 e-168 5EXR-D nrPDB 216 2e-56 Sequences not found previously or not previously below threshold: 3FLO-A nrPDB 56 4e-08 6HMS-A nrPDB 49 5e-06 6HMF-A nrPDB 49 5e-06 3GMC-A nrPDB 32 0.59 5EYF-A nrPDB 32 1.00 2FFH-A nrPDB 31 1.7 2FGE-A nrPDB 30 2.1 2C4M-A nrPDB 30 3.5 6GML-W nrPDB 29 6.4 3NPH-B nrPDB 28 8.1 >5VBN-A nrPDB Length = 527 Score = 915 bits (2364), Expect = 0.0, Method: Composition-based stats. Identities = 527/527 (100%), Positives = 527/527 (100%) Query: 1 MAPERLRSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIINAVEKQPLSSN 60 MAPERLRSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIINAVEKQPLSSN Sbjct: 1 MAPERLRSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIINAVEKQPLSSN 60 Query: 61 MIERSVVEAAVQECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHPAPNLF 120 MIERSVVEAAVQECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHPAPNLF Sbjct: 61 MIERSVVEAAVQECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHPAPNLF 120 Query: 121 GTPRDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGSTTKIGD 180 GTPRDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGSTTKIGD Sbjct: 121 GTPRDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGSTTKIGD 180 Query: 181 AIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEGWFEDQVFHVNAF 240 AIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEGWFEDQVFHVNAF Sbjct: 181 AIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEGWFEDQVFHVNAF 240 Query: 241 GFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVWLDQVEV 300 GFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVWLDQVEV Sbjct: 241 GFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVWLDQVEV 300 Query: 301 LEKLRIMFAGYSPAPPTCFILCGNFSSAPYGKNQVQALKDSLKTLADIICEYPDIHQSSR 360 LEKLRIMFAGYSPAPPTCFILCGNFSSAPYGKNQVQALKDSLKTLADIICEYPDIHQSSR Sbjct: 301 LEKLRIMFAGYSPAPPTCFILCGNFSSAPYGKNQVQALKDSLKTLADIICEYPDIHQSSR 360 Query: 361 FVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQYCTQEITVFREDLV 420 FVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQYCTQEITVFREDLV Sbjct: 361 FVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQYCTQEITVFREDLV 420 Query: 421 NKMCRNCVRFPSSNLAIPNHFVKTILSQGHLTPLPLYVCPVYWAYDYALRVYPVPDLLVI 480 NKMCRNCVRFPSSNLAIPNHFVKTILSQGHLTPLPLYVCPVYWAYDYALRVYPVPDLLVI Sbjct: 421 NKMCRNCVRFPSSNLAIPNHFVKTILSQGHLTPLPLYVCPVYWAYDYALRVYPVPDLLVI 480 Query: 481 ADKYDPFTTTNTECLCINPGSFPRSGFSFKVFYPSNKTVEDSKLQGF 527 ADKYDPFTTTNTECLCINPGSFPRSGFSFKVFYPSNKTVEDSKLQGF Sbjct: 481 ADKYDPFTTTNTECLCINPGSFPRSGFSFKVFYPSNKTVEDSKLQGF 527 >6HV9-B nrPDB Length = 689 Score = 588 bits (1517), Expect = e-168, Method: Composition-based stats. Identities = 141/528 (26%), Positives = 235/528 (44%), Gaps = 89/528 (16%) Query: 73 ECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHPAPNLFGTP------RDK 126 E S+++D F +I A RF YN + +F+ + N L G DK Sbjct: 159 ESSKALD--WRDYFKVINASQQQRFSYNPHKMQFI--FVPNKKQNGLGGIAGFLPDIEDK 214 Query: 127 AEMFRERYTILHQRTHRHE------LFTP---------PVIGSHPDESGSKFQLKTIETL 171 +MF RY + + R R+E +F P + ++ + S + I+ L Sbjct: 215 VQMFLTRYYLTNDRVMRNENFQNSDMFNPLSSMVSLQNELSNTNRQQQSSSNSITPIKNL 274 Query: 172 LGSTTKIGDAIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSG-LYTEACFVLAEGWF 230 LG + + ++LG++ + +G + LEDP+G+V++D+S+ G Y C VL EG + Sbjct: 275 LGRDAQ--NFLLLGLLNKNFKGNWSLEDPSGSVEIDISQTIPTQGHYYVPGCMVLVEGIY 332 Query: 231 ED--QVFHVNAFGFPPTEPSSTTRAYYGNINFFG--GPSNTSV------KTSAKLKQLEE 280 FHV + PP E T GN++ G G SN + +L LE+ Sbjct: 333 YSVGNKFHVTSMTLPPGERREITLETIGNLDLLGIHGISNNNFIARLDKDLKIRLHLLEK 392 Query: 281 ENKDAMFVFL-SDVWLDQVEVLEKLRIMFAGYSPAPPTCFILCGNFSSAPY-------GK 332 E D FV L ++++LD ++++ L + + PPT I G+F+S P Sbjct: 393 ELTDHKFVILGANLFLDDLKIMTALSKILQKLNDDPPTLLIWQGSFTSVPVFASMSSRNI 452 Query: 333 NQVQALKDSLKTLADIICEYPDIHQSSRFVFVPGPEDP-------GFGSILPRPPLAESI 385 + K++ LA ++ + ++ +++ +F+PGP D G LP+ P+ + Sbjct: 453 SSSTQFKNNFDALATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGASGTLPQDPIPSAF 512 Query: 386 TNEFRQRVPFSVFTTNPCRIQYCTQEITVFREDLVNKMCRNCVRFP---SSNLAIPN--- 439 T + + V+++NP RI Y +QEI +FR+DL + R+ + FP S ++ N Sbjct: 513 TKKINKVCKNVVWSSNPTRIAYLSQEIVIFRDDLSGRFKRHRLEFPFNESEDVYTENDNM 572 Query: 440 ----------------------------HFVKTILSQGHLTPLPLYVCPVYWAYDYALRV 471 VKTIL QGHL+P + P+ W D+ L + Sbjct: 573 MSKDTDIVPIDELVKEPDQLPQKVQETRKLVKTILDQGHLSPFLDSLRPISWDLDHTLTL 632 Query: 472 YPVPDLLVIADKYDP-FTTTNTECLCINPGSFPRS-GFSFKVFYPSNK 517 P+P +V+ D F T C INPGSF + + + PS+K Sbjct: 633 CPIPSTMVLCDTTSAQFDLTYNGCKVINPGSFIHNRRARYMEYVPSSK 680 >5EXR-D nrPDB Length = 597 Score = 216 bits (550), Expect = 2e-56, Method: Composition-based stats. Identities = 52/217 (23%), Positives = 84/217 (38%), Gaps = 14/217 (6%) Query: 307 MFAGYSPAPPTCFILCGNFSSAPYGKNQ----VQALKDSLKTLADIICEYPDIHQSSRFV 362 + A + P IL G F A + + + +D K I E S V Sbjct: 362 LIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDIFKQCLRTIIE-GTRSSGSHLV 420 Query: 363 FVPGPEDPGFGSILPRPPLAES-ITNEFRQRVPFSVFTTNPCRIQYCTQEITVFREDLVN 421 FVP D + P+PP + S ++ E +++V F + PC + + DL+ Sbjct: 421 FVPSLRDVHHEPVYPQPPFSYSDLSREDKKQVQF---VSEPCSLSINGVIFGLTSTDLLF 477 Query: 422 KMCRNCVRFPSSNLAIPNHFVKTILSQGHLTPL--PLYVCPVYWAYDYALRVYPV-PDLL 478 + + S + +K IL+Q PL P + + Y PV PD+L Sbjct: 478 HLGAEEISSSSGTSDRFSRILKHILTQRSYYPLYPPQEDMAIDYESFYVYAQLPVTPDVL 537 Query: 479 VIADKYDPFTTTNTECLCINPGSFPRS--GFSFKVFY 513 +I + F C+C+NPG + G +F Y Sbjct: 538 IIPSELRYFVKDVLGCVCVNPGRLTKGQVGGTFARLY 574 >3FLO-A nrPDB Length = 460 Score = 56.2 bits (134), Expect = 4e-08, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 67/244 (27%), Gaps = 43/244 (17%) Query: 319 FILCGNFSSAPYGKNQVQALKDSLKTLADIICEYPDIHQSSRFVFVPGPED-PGFGSILP 377 I G + P K Q + L + L I + I + V +P +D + P Sbjct: 197 LIASGKLPNFPQFKTQPKTLDELFLKLFTPILK--TISPHIQTVLIPSTKDAISNHAAYP 254 Query: 378 RPPLAESITNEFRQRVPFSVFTTNPCRIQYCTQEITVFREDLVNKMCRNCVRFPSSNLAI 437 + A I + NP Q D + +S+ Sbjct: 255 Q---ASLIRKALQLPKRNFKCMANPSSFQINEIYFGCSNVDTFKDLKEVIKGGTTSSRYR 311 Query: 438 PNHFVKTILSQGHLTP-LPLYVC----PVYW-----------------------AYDYAL 469 + + IL Q P P + P D + Sbjct: 312 LDRVSEHILQQRRYYPIFPGSIRTRIKPKDVSTKKETNDMESKEEKVYEHISGADLDVSY 371 Query: 470 RVYP------VPDLLVIADKYDPFTTTNTECLCINPGSFPRSG---FSFKVFYPSNKTVE 520 PD+++I + F + INPG F R+ S+ +E Sbjct: 372 LGLTEFVGGFSPDIMIIPSELQHFARVVQNVVVINPGRFIRATGNRGSYAQITVQCPDLE 431 Query: 521 DSKL 524 D KL Sbjct: 432 DGKL 435 >6HMS-A nrPDB Length = 400 Score = 49.3 bits (116), Expect = 5e-06, Method: Composition-based stats. Identities = 59/341 (17%), Positives = 115/341 (33%), Gaps = 58/341 (17%) Query: 183 VLGMITQLKEGK----FFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAE----------- 227 ++G++ +E F +ED TG V++ L K S Y EA VL + Sbjct: 50 IIGLVNSKRETNRGLIFEVEDKTGIVKVFLPK---DSEDYREAFKVLPDAVVAFKGFYSK 106 Query: 228 -GWFEDQVFHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAM 286 G F F++ + Y + + A LK LE Sbjct: 107 KGIFFANKFYLPDVPLYRKQKPPLEEKVYAILISDIHVGSREFCEKAFLKFLE------- 159 Query: 287 FVFLSDVWL-------DQVEVLEKLR-IMFAGYSPAPPTCFILCGNFSSAPYGKNQVQAL 338 WL ++ E++ +++ ++ AG I G +S + + Sbjct: 160 -------WLNGHVESKEEEEIVSRVKYLIIAG--DVVDGIGIYPGQYSDL-----VIPDI 205 Query: 339 KDSLKTLADIICEYPDIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVF 398 D + LA+++ ++ + PG D +P+P + + + ++ Sbjct: 206 FDQYEALANLLA---NVPEHITMFIGPGNAD-AARPAIPQPEFYKEYAKPIYK-LKNAII 260 Query: 399 TTNPCRIQYCTQEITVFREDLVNKMCRNCVRF-PSSNLAIPNHFVKTILSQGHLTPLPLY 457 +NP I+ ++ + + + V F P P + +L HL P Sbjct: 261 ISNPAVIRLHGRDFLIAH----GRGIEDVVSFVPGLTHHKPGLPMVELLKMRHLAPTFGG 316 Query: 458 VCPVYWAYDYALRVYPVPDLLVIADKYDPFTTTNTECLCIN 498 P+ + L + VPDL+ + + +N Sbjct: 317 KVPIAPDPEDLLVIEEVPDLVQMGHVHVYDAVVYRGVQLVN 357 >6HMF-A nrPDB Length = 475 Score = 49.3 bits (116), Expect = 5e-06, Method: Composition-based stats. Identities = 59/341 (17%), Positives = 115/341 (33%), Gaps = 58/341 (17%) Query: 183 VLGMITQLKEGK----FFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAE----------- 227 ++G++ +E F +ED TG V++ L K S Y EA VL + Sbjct: 125 IIGLVNSKRETNRGLIFEVEDKTGIVKVFLPK---DSEDYREAFKVLPDAVVAFKGFYSK 181 Query: 228 -GWFEDQVFHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAM 286 G F F++ + Y + + A LK LE Sbjct: 182 KGIFFANKFYLPDVPLYRKQKPPLEEKVYAILISDIHVGSREFCEKAFLKFLE------- 234 Query: 287 FVFLSDVWL-------DQVEVLEKLR-IMFAGYSPAPPTCFILCGNFSSAPYGKNQVQAL 338 WL ++ E++ +++ ++ AG I G +S + + Sbjct: 235 -------WLNGHVESKEEEEIVSRVKYLIIAG--DVVDGIGIYPGQYSDL-----VIPDI 280 Query: 339 KDSLKTLADIICEYPDIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVF 398 D + LA+++ ++ + PG D +P+P + + + ++ Sbjct: 281 FDQYEALANLLA---NVPEHITMFIGPGNAD-AARPAIPQPEFYKEYAKPIYK-LKNAII 335 Query: 399 TTNPCRIQYCTQEITVFREDLVNKMCRNCVRF-PSSNLAIPNHFVKTILSQGHLTPLPLY 457 +NP I+ ++ + + + V F P P + +L HL P Sbjct: 336 ISNPAVIRLHGRDFLIAH----GRGIEDVVSFVPGLTHHKPGLPMVELLKMRHLAPTFGG 391 Query: 458 VCPVYWAYDYALRVYPVPDLLVIADKYDPFTTTNTECLCIN 498 P+ + L + VPDL+ + + +N Sbjct: 392 KVPIAPDPEDLLVIEEVPDLVQMGHVHVYDAVVYRGVQLVN 432 >3GMC-A nrPDB Length = 415 Score = 32.0 bits (71), Expect = 0.59, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 41/132 (31%), Gaps = 13/132 (9%) Query: 221 ACFVLAEGWFEDQVFHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEE 280 A VL E + F + P + A G + +L + Sbjct: 21 AAAVLEENLYFGGSFTMANVNKTPGKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSS 80 Query: 281 ENKDAMFVFLSDVWLDQVEVLE---KLRIMFAGYSPAPPTCFILCGN-------FSSAPY 330 E + F +W + + VLE L + G S PPT N F+ P+ Sbjct: 81 ELR--AFGAGIYLWHNGLRVLEGLGALDDVLQG-SHTPPTYETWMHNKSVSKETFNGLPW 137 Query: 331 GKNQVQALKDSL 342 L D+L Sbjct: 138 RIMTRSHLHDAL 149 >5EYF-A nrPDB Length = 245 Score = 31.6 bits (70), Expect = 1.00, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 9/88 (10%) Query: 276 KQLEEENKDAMFVFLSDVWLDQVEVLEKLRIMFAGYSPAPPTCFILCGNFSSAPYGKNQV 335 K LE EN F L Q + + + G + P ++ G F++ PYG Sbjct: 149 KILELENYAEAFTALQS---GQGDAMTTDNAILLGIADENPEYELVGGTFTNEPYGIAIN 205 Query: 336 QALKDSLKTLADIICE------YPDIHQ 357 + ++ LK + + E Y I+Q Sbjct: 206 KGQENFLKAVNQALEEMHADGTYDKIYQ 233 >2FFH-A nrPDB Length = 425 Score = 30.8 bits (68), Expect = 1.7, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 26/56 (46%) Query: 3 PERLRSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIINAVEKQPLS 58 PERL R L + L + A EA +S EL LED L+++ N P S Sbjct: 284 PERLAGRILGMGDVASLAEKVRAAGLEAEAPKSAKELSLEDFLKQMQNLKRLGPFS 339 >2FGE-A nrPDB Length = 995 Score = 30.4 bits (67), Expect = 2.1, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 79/207 (38%), Gaps = 34/207 (16%) Query: 24 EAIKYLTEALQSI--------SELELEDKLEKII------NAVEKQPLSSNMIERSVVEA 69 E +KY TE L+++ S+ +EK+I +E QP + V E Sbjct: 438 EPLKY-TEPLKALKTRIAEEGSKAVFSPLIEKLILNNSHRVTIEMQPDPEKATQEEVEEK 496 Query: 70 AVQECSQSVDETIEHVFNIIGAFDIPRFVYN----SERKKFLPLLMTNHPAPNLFGTPRD 125 + E ++ T E + + A + + E + +P L NL P++ Sbjct: 497 NILEKVKAA-MTEEDLAELARATEELKLKQETPDPPEALRCVPSL-------NLGDIPKE 548 Query: 126 KAEMFRERYTILHQRTHRHELFTPPVIGSHP--DESGSKFQLKTI-----ETLLGSTTKI 178 + E I + RH+LFT +I + D K +L + ++LL TK Sbjct: 549 PTYVPTEVGDINGVKVLRHDLFTNDIIYTEVVFDIGSLKHELLPLVPLFCQSLLEMGTKD 608 Query: 179 GDAIVLGMITQLKEGKFFLEDPTGTVQ 205 + L + K G + T +V+ Sbjct: 609 LTFVQLNQLIGRKTGGISVYPLTSSVR 635 >2C4M-A nrPDB Length = 796 Score = 29.7 bits (65), Expect = 3.5, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 15/119 (12%) Query: 269 VKTSA-KLKQLEEENKDAMFVFLSDVWLDQVEVLEKLRIMFAGYSPAPPTCFILCGNFSS 327 +L + + + +A++V D++ RI G + P I + Sbjct: 518 FDVQIKRLHEYKRQLMNALYVL--DLYF---------RIKEDGLTDIPARTVIFGAK--A 564 Query: 328 APYGKNQVQALKDSLKTLADIICEYPDIHQSSRFVFVPGPEDPGFGSILPRPPLAESIT 386 AP G + +A+ + ++AD++ P++ + VFV ILP ++E I+ Sbjct: 565 AP-GYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQIS 622 >6GML-W nrPDB Length = 584 Score = 28.9 bits (63), Expect = 6.4, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 13/69 (18%) Query: 294 WLDQVEVLEKLRIMFAGYSPAPPTCFIL------------CGNFSSAPYGKNQVQALKDS 341 WL+Q+ R +F + A P C +L G +S Q++ Sbjct: 139 WLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVSTACQQLEVFSRV 198 Query: 342 LKT-LADII 349 L+T LA I+ Sbjct: 199 LRTSLATIL 207 >3NPH-B nrPDB Length = 148 Score = 28.5 bits (62), Expect = 8.1, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 13/94 (13%) Query: 161 SKFQLKTIETLL-GSTTKIGDAIVLGMITQLKEGKFFLEDPT------------GTVQLD 207 S+ +L + E+LL G + D + ++++ KFF +P G D Sbjct: 34 SQERLTSAESLLRGREISVRDFVRAVALSEVYRQKFFHSNPQNRFIELNYKHLLGRAPYD 93 Query: 208 LSKAQFHSGLYTEACFVLAEGWFEDQVFHVNAFG 241 S+ FH+ LY + + + D V + FG Sbjct: 94 QSEIAFHTDLYHQGGYEAEINSYIDSVEYTENFG 127 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.133 0.353 Lambda K H 0.267 0.0407 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,235,313 Number of Sequences: 36641 Number of extensions: 758381 Number of successful extensions: 1931 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 1892 Number of HSP's gapped (non-prelim): 30 length of query: 527 length of database: 10,336,785 effective HSP length: 102 effective length of query: 425 effective length of database: 6,599,403 effective search space: 2804746275 effective search space used: 2804746275 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 61 (28.1 bits)