BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P55931 (617 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2GMH-A nrPDB 1215 0.0 3FPZ-A nrPDB 39 0.005 6BZ0-A nrPDB 39 0.006 1V59-A nrPDB 37 0.026 3RHA-A nrPDB 37 0.030 3JSK-A nrPDB 36 0.041 1FOH-A nrPDB 36 0.055 2DKH-A nrPDB 35 0.067 1RP0-A nrPDB 35 0.080 2YQU-A nrPDB 35 0.089 4Y4M-A nrPDB 35 0.13 5J5Z-A nrPDB 33 0.31 4JDR-A nrPDB 33 0.33 2TMD-A nrPDB 33 0.34 1I8T-A nrPDB 33 0.35 5U8W-A nrPDB 33 0.40 3UKH-A nrPDB 33 0.40 5TR3-A nrPDB 33 0.44 3ATQ-A nrPDB 33 0.44 6J0Z-C nrPDB 33 0.45 5BR7-A nrPDB 33 0.49 4OVI-A nrPDB 33 0.49 3LAD-A nrPDB 33 0.49 3NIX-A nrPDB 32 0.58 6H3G-A nrPDB 32 0.60 1EBD-A nrPDB 32 0.70 3URH-A nrPDB 32 0.80 5NMX-A nrPDB 32 0.88 4K2X-A nrPDB 32 0.93 2BRY-A nrPDB 32 0.95 4RPJ-A nrPDB 32 1.00 4TXK-A nrPDB 32 1.2 4NTC-A nrPDB 31 1.3 2EQ6-A nrPDB 31 1.3 5ZYN-B nrPDB 31 1.5 4Z2R-A nrPDB 31 1.6 4B1B-A nrPDB 30 2.1 6IGZ-C nrPDB 30 2.3 5MJK-A nrPDB 30 2.9 1NAA-A nrPDB 30 3.4 3L1R-A nrPDB 30 3.5 3BI4-A nrPDB 30 3.8 6AON-A nrPDB 30 3.8 5W4C-A nrPDB 30 4.0 2R3B-A nrPDB 30 4.4 4GYK-A nrPDB 29 5.2 2Q7V-A nrPDB 29 5.3 3II4-A nrPDB 29 5.9 3C4A-A nrPDB 29 6.5 2CVJ-A nrPDB 29 7.5 1KNR-A nrPDB 29 7.6 >2GMH-A nrPDB Length = 584 Score = 1215 bits (3144), Expect = 0.0, Method: Compositional matrix adjust. Identities = 584/584 (100%), Positives = 584/584 (100%) Query: 34 SSTCKVPRITTHYTIYPRDQDKRWEGVNMERFAEEADVVIVGAGPAGLSAATRLKQLAAQ 93 SSTCKVPRITTHYTIYPRDQDKRWEGVNMERFAEEADVVIVGAGPAGLSAATRLKQLAAQ Sbjct: 1 SSTCKVPRITTHYTIYPRDQDKRWEGVNMERFAEEADVVIVGAGPAGLSAATRLKQLAAQ 60 Query: 94 HEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFGILTEK 153 HEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFGILTEK Sbjct: 61 HEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFGILTEK 120 Query: 154 YRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKG 213 YRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKG Sbjct: 121 YRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKG 180 Query: 214 IATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGI 273 IATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGI Sbjct: 181 IATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGI 240 Query: 274 GLKELWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPY 333 GLKELWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPY Sbjct: 241 GLKELWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPY 300 Query: 334 LSPFREFQRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMN 393 LSPFREFQRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMN Sbjct: 301 LSPFREFQRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMN 360 Query: 394 VPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRN 453 VPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRN Sbjct: 361 VPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRN 420 Query: 454 IRPSCHGILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQ 513 IRPSCHGILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQ Sbjct: 421 IRPSCHGILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQ 480 Query: 514 ISFDLLSSVALSGTNHEHDQPAHLTLKDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQ 573 ISFDLLSSVALSGTNHEHDQPAHLTLKDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQ Sbjct: 481 ISFDLLSSVALSGTNHEHDQPAHLTLKDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQ 540 Query: 574 GDGFRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 617 GDGFRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM Sbjct: 541 GDGFRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 584 >3FPZ-A nrPDB Length = 326 Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 34/46 (73%), Gaps = 5/46 (10%) Query: 61 NMERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKA 106 ++++FA +DV+IVGAG +GLSAA + A++ DL+VC++E + Sbjct: 59 DLDKFAV-SDVIIVGAGSSGLSAA----YVIAKNRPDLKVCIIESS 99 >6BZ0-A nrPDB Length = 480 Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%) Query: 65 FAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLD 120 +++ D+V++G GP G AA R QL +V +EK H G +L G CL+ Sbjct: 4 MSQQFDLVVIGGGPGGYEAAIRAAQLG------FKVACIEKRIHNGKPSLGGTCLN 53 >1V59-A nrPDB Length = 478 Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 13/80 (16%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRA------ 123 DVVI+G GPAG AA + QL VEK +G L+ C+ +A Sbjct: 7 DVVIIGGGPAGYVAAIKAAQLG------FNTACVEKRGKLGGTCLNVGCIPSKALLNNSH 60 Query: 124 -FEELFPDWKEKGAPLNTPV 142 F ++ + +++G +N + Sbjct: 61 LFHQMHTEAQKRGIDVNGDI 80 >3RHA-A nrPDB Length = 482 Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 15/64 (23%) Query: 61 NMERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH----TLSG 116 N++R DVVIVGAGP+GL+AA LK+ L V ++E +G T+ G Sbjct: 5 NLDR-----DVVIVGAGPSGLTAARELKKAG------LSVAVLEARDRVGGRTWTDTIDG 53 Query: 117 ACLD 120 A L+ Sbjct: 54 AMLE 57 >3JSK-A nrPDB Length = 344 Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 9/67 (13%) Query: 43 TTHYTIYPRDQDKRWEGVNMERFAE-----EADVVIVGAGPAGLSAATRLKQLAAQHEKD 97 T +T P + + FA+ E D+VIVGAG GLSAA L L D Sbjct: 49 TDAFTFSPIRESTVSRAMTRRYFADLDAHAETDIVIVGAGSCGLSAAYVLSTL----RPD 104 Query: 98 LRVCLVE 104 LR+ +VE Sbjct: 105 LRITIVE 111 >1FOH-A nrPDB Length = 664 Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAA 107 DV+IVGAGPAGL AA L + Q + DL+V +++K + Sbjct: 9 DVLIVGAGPAGLMAARVLSEYVRQ-KPDLKVRIIDKRS 45 >2DKH-A nrPDB Length = 639 Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 5/45 (11%) Query: 61 NMERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEK 105 + E + DV+IVG GPAGL+ A +L D+R C+VE+ Sbjct: 25 HTEAVPSQVDVLIVGCGPAGLTLAAQLAAF-----PDIRTCIVEQ 64 >1RP0-A nrPDB Length = 284 Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust. Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 11/82 (13%) Query: 47 TIYPRDQDKRWEGVNMERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKA 106 +I R+ +R+ +M +AE DVV+VGAG AGLSAA + + +++V ++E++ Sbjct: 20 SIVSREMTRRYM-TDMITYAE-TDVVVVGAGSAGLSAAYEISK-----NPNVQVAIIEQS 72 Query: 107 AHIGAHTLSGACLDPRAFEELF 128 G GA L + F + Sbjct: 73 VSPGG----GAWLGGQLFSAMI 90 >2YQU-A nrPDB Length = 455 Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 6/57 (10%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEE 126 D++++GAGP G AA R QL ++V +VEK +G L C+ +A E Sbjct: 3 DLLVIGAGPGGYVAAIRAAQLG------MKVGVVEKEKALGGTCLRVGCIPSKALLE 53 >4Y4M-A nrPDB Length = 290 Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 78/201 (38%), Gaps = 39/201 (19%) Query: 68 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL 127 EADVVIVGAGP+GL+ A L + + +V ++E+ G T G P E Sbjct: 59 EADVVIVGAGPSGLTCARYLAK------EGFKVVVLERHLAFGGGTWGGGMGFPYIVVEE 112 Query: 128 FPD--WKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGE 185 D +E G L + M + G YV + + + Sbjct: 113 PADELLREVGIKL-------------------------IDMGD-GYYVADSVEVPAKLAV 146 Query: 186 QAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFA 245 A G ++ G +++ EDG V G+ N I++ G L + +KV + A Sbjct: 147 AAMDAGAKILTGIVVEDLILREDG-VAGVVINSYAIERAGLHIDP----LTIRSKVVVDA 201 Query: 246 EGCHGHLAKQLYKKFDLRANC 266 G + L KK L A+ Sbjct: 202 TGHEASIVNILVKKNKLEADV 222 >5J5Z-A nrPDB Length = 496 Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 6/57 (10%) Query: 68 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAF 124 +ADV ++G+GP G AA + QL + +EK +G L+ C+ +A Sbjct: 28 DADVTVIGSGPGGYVAAIKAAQLG------FKTVCIEKNETLGGTCLNVGCIPSKAL 78 >4JDR-A nrPDB Length = 474 Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 6/54 (11%) Query: 71 VVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAF 124 VV++GAGPAG SAA R L L +VE+ +G L+ C+ +A Sbjct: 9 VVVLGAGPAGYSAAFRCADLG------LETVIVERYNTLGGVCLNVGCIPSKAL 56 >2TMD-A nrPDB Length = 729 Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust. Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 7/92 (7%) Query: 28 LCATRWSSTCKVPRITTHYTIYPRDQDKRWEGVNMERFAEEADVVIVGAGPAGLSAATRL 87 +C +RW P I T + + W + + V+IVGAGP+G AA L Sbjct: 350 VCISRWE-IGGPPMICTQNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAGPSGSEAARVL 408 Query: 88 KQLAAQHEKDLRVCLVEKAAHIGAHTLSGACL 119 E V L + A IG H A L Sbjct: 409 M------ESGYTVHLTDTAEKIGGHLNQVAAL 434 >1I8T-A nrPDB Length = 367 Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 6/49 (12%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGAC 118 D +IVG+G G A LK+L + +V ++EK HIG + + C Sbjct: 3 DYIIVGSGLFGAVCANELKKL------NKKVLVIEKRNHIGGNAYTEDC 45 >5U8W-A nrPDB Length = 481 Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 11/59 (18%) Query: 65 FAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH---TLSGACLD 120 +++ DVV++GAGP G AA R QL L+ +EK +IG L G CL+ Sbjct: 4 MSQKFDVVVIGAGPGGYVAAIRAAQLG------LKTACIEK--YIGKEGKVALGGTCLN 54 >3UKH-A nrPDB Length = 519 Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust. Identities = 13/22 (59%), Positives = 17/22 (77%) Query: 69 ADVVIVGAGPAGLSAATRLKQL 90 DV+++GAGP GL AA RL Q+ Sbjct: 7 VDVLVIGAGPTGLGAAKRLNQI 28 >5TR3-A nrPDB Length = 481 Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 6/94 (6%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFP 129 DVV++GAGP G AA + QL + + E +G L+ C+ +A L Sbjct: 9 DVVVIGAGPGGYVAAIKAAQLGLKTACIEKYTDAEGKLALGGTCLNVGCIPSKAL--LDS 66 Query: 130 DWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPG 163 WK K A + V GI T + ++ V + G Sbjct: 67 SWKYKEAKESFNV----HGISTGEVKMDVAAMVG 96 >3ATQ-A nrPDB Length = 453 Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust. Identities = 74/367 (20%), Positives = 152/367 (41%), Gaps = 58/367 (15%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKA--AHIGAHTLSGACLDPRAFEEL 127 DV+I+G G AG SAA +L + + L++ LV+ IG G + F++L Sbjct: 8 DVLIIGGGFAGSSAAYQLSR------RGLKILLVDSKPWNRIGDKP-CGDAVSKAHFDKL 60 Query: 128 ---FPDWKE-----KGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHL 179 +P +E G L +P + + + E + + P+ + V++ Sbjct: 61 GMPYPKGEELENKINGIKLYSPDMQTVWTVNGEGFELNAPL--------YNQRVLK---- 108 Query: 180 VSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHA 239 +A+ GVE++ A + +F EDG VKG + + T E L +++ Sbjct: 109 ------EAQDRGVEIWDLTTAMKPIF-EDGYVKGAVLFN---------RRTNEE-LTVYS 151 Query: 240 KVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHT-VGWP 298 KV + A G +L + + + + + + +E+ + E DH + Sbjct: 152 KVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKED-----IEDHDYLRIF 206 Query: 299 LDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSPFREFQRWKHHPSIKPTLEGGKR 358 +D+ T G + ++ +G+ + +G + P + + + K+ P ++ K Sbjct: 207 IDQETSPGGYWWYFPKGKNKVNVGLGIQGGMGYPSIHEYYK----KYLDKYAPDVDKSKL 262 Query: 359 IAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQL 418 + G + + + + + G ++IG S +N G +AM SG AA++I + Sbjct: 263 LVKGGALVPTR--RPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAF 320 Query: 419 TSENLQS 425 + + + Sbjct: 321 ETGDFSA 327 >6J0Z-C nrPDB Length = 491 Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust. Identities = 54/194 (27%), Positives = 79/194 (40%), Gaps = 41/194 (21%) Query: 68 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL 127 ++DVV+VGAGP GL A L+ LA + V +++K A + + R EE Sbjct: 5 DSDVVVVGAGPTGLMLAGELR-LAG-----VSVVVLDKLAEPIKESRA-LGFSARTIEE- 56 Query: 128 FPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNH----GNYVVR---LGHLV 180 + ++G DRFG E IPV G+P++ G+Y R Sbjct: 57 ---FAQRG-------LMDRFG---EVGVIPVGHFGGVPLDYQVIEGGSYGARGIPQARTE 103 Query: 181 SWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAK 240 +G A LG EV GY E+ ED G + DG+P L L A+ Sbjct: 104 GILGGWARELGAEVRRGY---EVTAIED---TGTSVTVEAAGADGSP-------LSLRAR 150 Query: 241 VTIFAEGCHGHLAK 254 + +G + K Sbjct: 151 YVVGCDGARSSVRK 164 >5BR7-A nrPDB Length = 393 Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 5/48 (10%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGA 117 D+++VG+G GL+ A R A+Q K +V +VEK +H+G + S A Sbjct: 5 DLIVVGSGLFGLTVAER---AASQLGK--KVLIVEKRSHLGGNAYSEA 47 >4OVI-A nrPDB Length = 542 Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 6/44 (13%) Query: 67 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIG 110 EE DV++VGAG +GL A RL++L V ++E A +G Sbjct: 15 EEVDVLVVGAGFSGLYALYRLRELGRS------VHVIETAGDVG 52 >3LAD-A nrPDB Length = 476 Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 7/52 (13%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEK-AAHIGAHTLSGACLD 120 DV+++GAGP G AA + QL L+ L+EK G L G CL+ Sbjct: 5 DVIVIGAGPGGYVAAIKSAQLG------LKTALIEKYKGKEGKTALGGTCLN 50 >3NIX-A nrPDB Length = 421 Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 10/66 (15%) Query: 62 MERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDP 121 M+R E+ DV+++GAGPAG AA+ + ++ +V +VEK + G L P Sbjct: 1 MQR--EKVDVLVIGAGPAGTVAASLV------NKSGFKVKIVEKQKF--PRFVIGESLLP 50 Query: 122 RAFEEL 127 R E L Sbjct: 51 RCMEHL 56 >6H3G-A nrPDB Length = 651 Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust. Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 4/42 (9%) Query: 67 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH 108 EE DV++ G GPAG A RL A + L+V L+E A+ Sbjct: 5 EEVDVIVCGGGPAGCVVAGRL----AYADPTLKVMLIEGGAN 42 >1EBD-A nrPDB Length = 455 Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust. Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 7/59 (11%) Query: 66 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAF 124 A E + ++VGAGP G AA R QL +V +VEK ++G L+ C+ +A Sbjct: 1 AIETETLVVGAGPGGYVAAIRAAQLGQ------KVTIVEK-GNLGGVCLNVGCIPSKAL 52 >3URH-A nrPDB Length = 491 Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 9/62 (14%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAF---EE 126 D++++G+GP G A + QL ++V +VEK + G L+ C+ +A E Sbjct: 27 DLIVIGSGPGGYVCAIKAAQLG------MKVAVVEKRSTYGGTCLNVGCIPSKALLHASE 80 Query: 127 LF 128 +F Sbjct: 81 MF 82 >5NMX-A nrPDB Length = 425 Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 6/40 (15%) Query: 71 VVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIG 110 V ++GAGP+GL+AA LKQ V + E+ H+G Sbjct: 4 VAVLGAGPSGLTAARYLKQAG------FEVMVFERYHHVG 37 >4K2X-A nrPDB Length = 523 Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 15/137 (10%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCL-VEKAAHIGAHTLSGACLDPRAFEELF 128 DVVI GAGP GL A L+ A+ R+ V+ + +G H + LD R E F Sbjct: 24 DVVIAGAGPTGLMLACELRLAGARTLVLERLAEPVDFSKALGVHARTVELLDMRGLGEGF 83 Query: 129 P---------DWKEKGAPLNTPVTEDR--FGILTEKYRIPVPILPGLPMNNHGNYVVRLG 177 ++ G PL+ + R + + + R +L G + +R G Sbjct: 84 QAEAPKLRGGNFASLGVPLDFSSFDTRHPYALFVPQVRTE-ELLTGRALELGAE--LRRG 140 Query: 178 HLVSWMGEQAEALGVEV 194 H V+ + + A+ + V V Sbjct: 141 HAVTALEQDADGVTVSV 157 >2BRY-A nrPDB Length = 497 Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 6/43 (13%) Query: 72 VIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTL 114 ++VGAGP GL AA L L A RV LVEK H + Sbjct: 96 LVVGAGPCGLRAAVELALLGA------RVVLVEKRIKFSRHNV 132 >4RPJ-A nrPDB Length = 399 Score = 31.6 bits (70), Expect = 1.00, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 5/56 (8%) Query: 62 MERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGA 117 M+ D+ +VG+G GL+ A R +A Q +K RV ++E+ HIG + S A Sbjct: 1 MQPMTARFDLFVVGSGFFGLTIAER---VATQLDK--RVLVLERRPHIGGNAYSEA 51 >4TXK-A nrPDB Length = 615 Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 6/43 (13%) Query: 72 VIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTL 114 ++VGAGP GL AA L L A RV LVEK H + Sbjct: 88 LVVGAGPCGLRAAVELALLGA------RVVLVEKRIKFSRHNV 124 >4NTC-A nrPDB Length = 335 Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust. Identities = 14/20 (70%), Positives = 17/20 (85%) Query: 70 DVVIVGAGPAGLSAATRLKQ 89 DV+I+GAGPAGLS AT L + Sbjct: 16 DVLIIGAGPAGLSTATGLAR 35 >2EQ6-A nrPDB Length = 464 Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAF 124 D++++G GP G AA R QL L+V VE A +G L+ C+ +A Sbjct: 8 DLIVIGTGPGGYHAAIRAAQLG------LKVLAVE-AGEVGGVCLNVGCIPTKAL 55 >5ZYN-B nrPDB Length = 471 Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 5/48 (10%) Query: 71 VVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGAC 118 VV++G+G AGL+ + RL + + V L++KAA IG +++ + Sbjct: 7 VVVIGSGLAGLTTSNRLIS-----KYRIPVVLLDKAASIGGNSIKASS 49 >4Z2R-A nrPDB Length = 592 Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust. Identities = 15/23 (65%), Positives = 17/23 (73%) Query: 68 EADVVIVGAGPAGLSAATRLKQL 90 E DV+IVGAGPAG +AT L L Sbjct: 12 ETDVLIVGAGPAGAMSATLLASL 34 >4B1B-A nrPDB Length = 542 Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 51/138 (36%), Gaps = 29/138 (21%) Query: 62 MERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRV--------------------- 100 +E + D V++G GP G+++A K+ AA + L Sbjct: 36 VEEHTYDYDYVVIGGGPGGMASA---KEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNV 92 Query: 101 -CLVEKAAHIGAHTLSGACLDPRA----FEELFPDWKEKGAPLNTPVTEDRFGILTEKYR 155 C+ +K H H S LD +A F+ L DWK+ + + + F +T Sbjct: 93 GCVPKKLMHYAGHMGSIFKLDSKAYGWKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRS 152 Query: 156 IPVPILPGLPMNNHGNYV 173 V + GL N V Sbjct: 153 SKVKYINGLAKLKDKNTV 170 >6IGZ-C nrPDB Length = 81 Score = 30.4 bits (67), Expect = 2.3, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 13/63 (20%) Query: 546 VNRNLSIYD---GPEQ--RFCPAGVYEFVPLEQGDGFRLQINA-----QNCVHCKTCDIK 595 ++ N+ IYD G Q R CP V E VP DG + + A ++CV CK C+ Sbjct: 1 MSHNVKIYDTCIGCTQCVRACPTDVLEMVPW---DGCKAKQIASAPRTEDCVGCKRCETA 57 Query: 596 DPS 598 P+ Sbjct: 58 CPT 60 >5MJK-A nrPDB Length = 327 Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust. Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 8/84 (9%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELF- 128 DVVI+G+GPAG++AA + +++ L+E+ G + + +E + Sbjct: 26 DVVIIGSGPAGMTAAMYTAR------SEMKTLLLERGVPGGQMNNTAEIENYPGYETIMG 79 Query: 129 PDWKEKGA-PLNTPVTEDRFGILT 151 P+ K A PL E+ +G +T Sbjct: 80 PELSMKMAEPLEGLGVENAYGFVT 103 >1NAA-A nrPDB Length = 541 Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 20/74 (27%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRA------ 123 D +IVGAGP G+ AA RL E +V L+E+ T G + P A Sbjct: 4 DYIIVGAGPGGIIAADRLS------EAGKKVLLLERGGPSTKQT-GGTYVAPWATSSGLT 56 Query: 124 -------FEELFPD 130 FE LF D Sbjct: 57 KFDIPGLFESLFTD 70 >3L1R-A nrPDB Length = 478 Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 5/42 (11%) Query: 71 VVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH 112 V++VGAG +G+SAA RL + + ++E HIG Sbjct: 7 VIVVGAGMSGISAAKRLSEAGITD-----LLILEATDHIGGR 43 >3BI4-A nrPDB Length = 516 Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust. Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 6/36 (16%) Query: 71 VVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKA 106 V+I+GAG AGL AA+ L H+ ++ CLV +A Sbjct: 11 VIIIGAGIAGLKAASTL------HQNGIQDCLVLEA 40 >6AON-A nrPDB Length = 478 Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust. Identities = 13/26 (50%), Positives = 18/26 (69%) Query: 65 FAEEADVVIVGAGPAGLSAATRLKQL 90 +++ DVV++GAGP G AA R QL Sbjct: 4 MSKQFDVVVIGAGPGGYIAAIRAAQL 29 >5W4C-A nrPDB Length = 371 Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%) Query: 227 PKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTY 271 PK T E ++H+KV I G GH A + RAN EP Y Sbjct: 19 PKRTGEVSKKMHSKVVIIGSGPGGHTA----AIYLARANLEPVLY 59 >2R3B-A nrPDB Length = 310 Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 3/41 (7%) Query: 58 EGVNMERFAEEADVVIVGAGPAGLSAATR--LKQLAAQHEK 96 E V + E+ADV+++G G GL A + LK + AQH+K Sbjct: 101 ETVLLTNVVEQADVILIGPG-LGLDATAQQILKMVLAQHQK 140 >4GYK-A nrPDB Length = 648 Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%) Query: 150 LTEKYRIPVPILP-GLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHED 208 LT+ Y+ P +P L ++ G V RLG ++ G A G A + I ++ Sbjct: 109 LTDDYQKASPKIPLMLSIDQEGGIVTRLGEGTNFPGNMAL--------GAARSRINAYQT 160 Query: 209 GSVKGIATNDVGIQKDGAP 227 GS+ G + +GI D +P Sbjct: 161 GSIIGKELSALGINTDFSP 179 >2Q7V-A nrPDB Length = 325 Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust. Identities = 13/19 (68%), Positives = 16/19 (84%) Query: 66 AEEADVVIVGAGPAGLSAA 84 A + DVVI+G GPAGL+AA Sbjct: 6 AHDYDVVIIGGGPAGLTAA 24 >3II4-A nrPDB Length = 466 Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust. Identities = 13/21 (61%), Positives = 15/21 (71%) Query: 70 DVVIVGAGPAGLSAATRLKQL 90 DVV++GAGP G AA R QL Sbjct: 7 DVVVLGAGPGGYVAAIRAAQL 27 >3C4A-A nrPDB Length = 381 Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust. Identities = 11/19 (57%), Positives = 17/19 (89%) Query: 71 VVIVGAGPAGLSAATRLKQ 89 ++++GAGPAGL A++LKQ Sbjct: 3 ILVIGAGPAGLVFASQLKQ 21 >2CVJ-A nrPDB Length = 180 Score = 28.9 bits (63), Expect = 7.5, Method: Composition-based stats. Identities = 12/20 (60%), Positives = 16/20 (80%) Query: 70 DVVIVGAGPAGLSAATRLKQ 89 DV++VG GP+GLSAA L + Sbjct: 3 DVIVVGGGPSGLSAALFLAR 22 >1KNR-A nrPDB Length = 540 Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust. Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 3/26 (11%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHE 95 DV+I+G+G AGLS A R LA QH+ Sbjct: 10 DVLIIGSGAAGLSLALR---LADQHQ 32 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2GMH-A nrPDB 1296 0.0 Sequences not found previously or not previously below threshold: 6BZ0-A nrPDB 42 6e-04 3FPZ-A nrPDB 41 0.002 2YQU-A nrPDB 38 0.015 1V59-A nrPDB 38 0.017 2DKH-A nrPDB 37 0.025 3RHA-A nrPDB 37 0.028 3JSK-A nrPDB 36 0.041 1FOH-A nrPDB 36 0.042 3LAD-A nrPDB 36 0.044 5U8W-A nrPDB 36 0.054 4Y4M-A nrPDB 35 0.10 4JDR-A nrPDB 35 0.10 1RP0-A nrPDB 35 0.11 6J0Z-C nrPDB 35 0.11 5J5Z-A nrPDB 35 0.12 5TR3-A nrPDB 35 0.13 1EBD-A nrPDB 34 0.15 2TMD-A nrPDB 34 0.17 3URH-A nrPDB 34 0.20 3UKH-A nrPDB 34 0.21 6H3G-A nrPDB 33 0.25 2EQ6-A nrPDB 33 0.30 4K2X-A nrPDB 33 0.44 4TXK-A nrPDB 33 0.50 4OVI-A nrPDB 33 0.50 2BRY-A nrPDB 33 0.50 4NTC-A nrPDB 33 0.56 4Z2R-A nrPDB 32 0.58 3NIX-A nrPDB 32 0.63 5NMX-A nrPDB 32 0.93 2Q7V-A nrPDB 32 1.0 6AON-A nrPDB 32 1.1 5BR7-A nrPDB 32 1.1 4RPJ-A nrPDB 31 1.5 3II4-A nrPDB 31 1.7 5MJK-A nrPDB 31 1.8 5W4C-A nrPDB 30 2.4 1I8T-A nrPDB 30 2.4 6IGZ-C nrPDB 30 2.7 5ZYN-B nrPDB 30 2.8 4GYK-A nrPDB 30 3.0 3C4A-A nrPDB 30 3.6 2R3B-A nrPDB 30 3.6 1NAA-A nrPDB 30 3.6 1KNR-A nrPDB 30 3.9 3BI4-A nrPDB 30 4.0 2CVJ-A nrPDB 30 4.6 4B1B-A nrPDB 29 4.8 2QA2-A nrPDB 29 5.5 3L1R-A nrPDB 29 7.6 3K30-A nrPDB 29 8.0 4Y4N-A nrPDB 28 9.9 >2GMH-A nrPDB Length = 584 Score = 1296 bits (3353), Expect = 0.0, Method: Composition-based stats. Identities = 584/584 (100%), Positives = 584/584 (100%) Query: 34 SSTCKVPRITTHYTIYPRDQDKRWEGVNMERFAEEADVVIVGAGPAGLSAATRLKQLAAQ 93 SSTCKVPRITTHYTIYPRDQDKRWEGVNMERFAEEADVVIVGAGPAGLSAATRLKQLAAQ Sbjct: 1 SSTCKVPRITTHYTIYPRDQDKRWEGVNMERFAEEADVVIVGAGPAGLSAATRLKQLAAQ 60 Query: 94 HEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFGILTEK 153 HEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFGILTEK Sbjct: 61 HEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFGILTEK 120 Query: 154 YRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKG 213 YRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKG Sbjct: 121 YRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKG 180 Query: 214 IATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGI 273 IATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGI Sbjct: 181 IATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGI 240 Query: 274 GLKELWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPY 333 GLKELWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPY Sbjct: 241 GLKELWVIDEKKWKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPY 300 Query: 334 LSPFREFQRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMN 393 LSPFREFQRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMN Sbjct: 301 LSPFREFQRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMN 360 Query: 394 VPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRN 453 VPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRN Sbjct: 361 VPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELYSVRN 420 Query: 454 IRPSCHGILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQ 513 IRPSCHGILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQ Sbjct: 421 IRPSCHGILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQ 480 Query: 514 ISFDLLSSVALSGTNHEHDQPAHLTLKDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQ 573 ISFDLLSSVALSGTNHEHDQPAHLTLKDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQ Sbjct: 481 ISFDLLSSVALSGTNHEHDQPAHLTLKDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQ 540 Query: 574 GDGFRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 617 GDGFRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM Sbjct: 541 GDGFRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 584 >6BZ0-A nrPDB Length = 480 Score = 42.3 bits (98), Expect = 6e-04, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Query: 66 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLD 120 +++ D+V++G GP G AA R QL +V +EK H G +L G CL+ Sbjct: 5 SQQFDLVVIGGGPGGYEAAIRAAQLG------FKVACIEKRIHNGKPSLGGTCLN 53 >3FPZ-A nrPDB Length = 326 Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 5/59 (8%) Query: 61 NMERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACL 119 ++++FA +DV+IVGAG +GLSAA + A++ DL+VC++E + G + G L Sbjct: 59 DLDKFAV-SDVIIVGAGSSGLSAA----YVIAKNRPDLKVCIIESSVAPGGGSWLGGQL 112 >2YQU-A nrPDB Length = 455 Score = 37.7 bits (86), Expect = 0.015, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 6/57 (10%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEE 126 D++++GAGP G AA R QL ++V +VEK +G L C+ +A E Sbjct: 3 DLLVIGAGPGGYVAAIRAAQLG------MKVGVVEKEKALGGTCLRVGCIPSKALLE 53 >1V59-A nrPDB Length = 478 Score = 37.7 bits (86), Expect = 0.017, Method: Composition-based stats. Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 13/77 (16%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRA------ 123 DVVI+G GPAG AA + QL VEK +G L+ C+ +A Sbjct: 7 DVVIIGGGPAGYVAAIKAAQLG------FNTACVEKRGKLGGTCLNVGCIPSKALLNNSH 60 Query: 124 -FEELFPDWKEKGAPLN 139 F ++ + +++G +N Sbjct: 61 LFHQMHTEAQKRGIDVN 77 >2DKH-A nrPDB Length = 639 Score = 36.9 bits (84), Expect = 0.025, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 5/43 (11%) Query: 63 ERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEK 105 E + DV+IVG GPAGL+ A +L D+R C+VE+ Sbjct: 27 EAVPSQVDVLIVGCGPAGLTLAAQLAAFP-----DIRTCIVEQ 64 >3RHA-A nrPDB Length = 482 Score = 36.9 bits (84), Expect = 0.028, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 10/57 (17%) Query: 68 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH----TLSGACLD 120 + DVVIVGAGP+GL+AA LK+ L V ++E +G T+ GA L+ Sbjct: 7 DRDVVIVGAGPSGLTAARELKKAG------LSVAVLEARDRVGGRTWTDTIDGAMLE 57 >3JSK-A nrPDB Length = 344 Score = 36.1 bits (82), Expect = 0.041, Method: Composition-based stats. Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 9/82 (10%) Query: 43 TTHYTIYPRDQDKRWEGVNMERFAE-----EADVVIVGAGPAGLSAATRLKQLAAQHEKD 97 T +T P + + FA+ E D+VIVGAG GLSAA L L D Sbjct: 49 TDAFTFSPIRESTVSRAMTRRYFADLDAHAETDIVIVGAGSCGLSAAYVLSTL----RPD 104 Query: 98 LRVCLVEKAAHIGAHTLSGACL 119 LR+ +VE G G L Sbjct: 105 LRITIVEAGVAPGGGAWLGGQL 126 >1FOH-A nrPDB Length = 664 Score = 36.1 bits (82), Expect = 0.042, Method: Composition-based stats. Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEK 105 DV+IVGAGPAGL AA L + Q + DL+V +++K Sbjct: 9 DVLIVGAGPAGLMAARVLSEYVRQ-KPDLKVRIIDK 43 >3LAD-A nrPDB Length = 476 Score = 36.1 bits (82), Expect = 0.044, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 7/56 (12%) Query: 66 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEK-AAHIGAHTLSGACLD 120 +++ DV+++GAGP G AA + QL L+ L+EK G L G CL+ Sbjct: 1 SQKFDVIVIGAGPGGYVAAIKSAQLG------LKTALIEKYKGKEGKTALGGTCLN 50 >5U8W-A nrPDB Length = 481 Score = 35.8 bits (81), Expect = 0.054, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Query: 66 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLD 120 +++ DVV++GAGP G AA R QL + C+ + G L G CL+ Sbjct: 5 SQKFDVVVIGAGPGGYVAAIRAAQLGLK-----TACIEKYIGKEGKVALGGTCLN 54 >4Y4M-A nrPDB Length = 290 Score = 35.0 bits (79), Expect = 0.10, Method: Composition-based stats. Identities = 54/214 (25%), Positives = 82/214 (38%), Gaps = 45/214 (21%) Query: 68 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL 127 EADVVIVGAGP+GL+ A L + + +V ++E+ G T G P E Sbjct: 59 EADVVIVGAGPSGLTCARYLAK------EGFKVVVLERHLAFGGGTWGGGMGFPYIVVEE 112 Query: 128 FPD--WKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGE 185 D +E G L + M + G YV + + + Sbjct: 113 PADELLREVGIKL-------------------------IDMGD-GYYVADSVEVPAKLAV 146 Query: 186 QAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFA 245 A G ++ G +++ EDG V G+ N I++ G L + +KV + A Sbjct: 147 AAMDAGAKILTGIVVEDLILREDG-VAGVVINSYAIERAGLHIDP----LTIRSKVVVDA 201 Query: 246 EGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELW 279 G + L KK L A+ G K +W Sbjct: 202 TGHEASIVNILVKKNKLEADVP------GEKSMW 229 >4JDR-A nrPDB Length = 474 Score = 35.0 bits (79), Expect = 0.10, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 6/57 (10%) Query: 68 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAF 124 + VV++GAGPAG SAA R L L +VE+ +G L+ C+ +A Sbjct: 6 KTQVVVLGAGPAGYSAAFRCADLG------LETVIVERYNTLGGVCLNVGCIPSKAL 56 >1RP0-A nrPDB Length = 284 Score = 35.0 bits (79), Expect = 0.11, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 7/73 (9%) Query: 47 TIYPRDQDKRWEGVNMERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKA 106 +I R+ +R+ +M +AE DVV+VGAG AGLSAA + + +++V ++E++ Sbjct: 20 SIVSREMTRRYM-TDMITYAE-TDVVVVGAGSAGLSAAYEISK-----NPNVQVAIIEQS 72 Query: 107 AHIGAHTLSGACL 119 G G L Sbjct: 73 VSPGGGAWLGGQL 85 >6J0Z-C nrPDB Length = 491 Score = 34.6 bits (78), Expect = 0.11, Method: Composition-based stats. Identities = 55/190 (28%), Positives = 77/190 (40%), Gaps = 44/190 (23%) Query: 68 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL 127 ++DVV+VGAGP GL A L+ LA + V +++K A + + R EE Sbjct: 5 DSDVVVVGAGPTGLMLAGELR-LAG-----VSVVVLDKLAEPIKESRALG-FSARTIEE- 56 Query: 128 FPDWKEKGAPLNTPVTEDRFGILTEKYRIPVPILPGLPMNNH----GNYVVR---LGHLV 180 + ++G DRFG E IPV G+P++ G+Y R Sbjct: 57 ---FAQRG-------LMDRFG---EVGVIPVGHFGGVPLDYQVIEGGSYGARGIPQARTE 103 Query: 181 SWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAK 240 +G A LG EV GY I ED G + DG+P L L A+ Sbjct: 104 GILGGWARELGAEVRRGYEVTAI---ED---TGTSVTVEAAGADGSP-------LSLRAR 150 Query: 241 VTIFAEGCHG 250 + GC G Sbjct: 151 YVV---GCDG 157 >5J5Z-A nrPDB Length = 496 Score = 34.6 bits (78), Expect = 0.12, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 6/57 (10%) Query: 68 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAF 124 +ADV ++G+GP G AA + QL + +EK +G L+ C+ +A Sbjct: 28 DADVTVIGSGPGGYVAAIKAAQLG------FKTVCIEKNETLGGTCLNVGCIPSKAL 78 >5TR3-A nrPDB Length = 481 Score = 34.6 bits (78), Expect = 0.13, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Query: 67 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEE 126 ++ DVV++GAGP G AA + QL + + E +G L+ C+ +A Sbjct: 6 QKFDVVVIGAGPGGYVAAIKAAQLGLKTACIEKYTDAEGKLALGGTCLNVGCIPSKAL-- 63 Query: 127 LFPDWKEKGA 136 L WK K A Sbjct: 64 LDSSWKYKEA 73 >1EBD-A nrPDB Length = 455 Score = 34.2 bits (77), Expect = 0.15, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 7/59 (11%) Query: 66 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAF 124 A E + ++VGAGP G AA R QL +V +VEK ++G L+ C+ +A Sbjct: 1 AIETETLVVGAGPGGYVAAIRAAQLGQ------KVTIVEK-GNLGGVCLNVGCIPSKAL 52 >2TMD-A nrPDB Length = 729 Score = 34.2 bits (77), Expect = 0.17, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 7/85 (8%) Query: 28 LCATRWSSTCKVPRITTHYTIYPRDQDKRWEGVNMERFAEEADVVIVGAGPAGLSAATRL 87 +C +RW P I T + + W + + V+IVGAGP+G AA L Sbjct: 350 VCISRWE-IGGPPMICTQNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAGPSGSEAARVL 408 Query: 88 KQLAAQHEKDLRVCLVEKAAHIGAH 112 E V L + A IG H Sbjct: 409 M------ESGYTVHLTDTAEKIGGH 427 >3URH-A nrPDB Length = 491 Score = 33.8 bits (76), Expect = 0.20, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 6/55 (10%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAF 124 D++++G+GP G A + QL ++V +VEK + G L+ C+ +A Sbjct: 27 DLIVIGSGPGGYVCAIKAAQLG------MKVAVVEKRSTYGGTCLNVGCIPSKAL 75 >3UKH-A nrPDB Length = 519 Score = 33.8 bits (76), Expect = 0.21, Method: Composition-based stats. Identities = 13/21 (61%), Positives = 17/21 (80%) Query: 70 DVVIVGAGPAGLSAATRLKQL 90 DV+++GAGP GL AA RL Q+ Sbjct: 8 DVLVIGAGPTGLGAAKRLNQI 28 >6H3G-A nrPDB Length = 651 Score = 33.5 bits (75), Expect = 0.25, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 4/42 (9%) Query: 67 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH 108 EE DV++ G GPAG A RL A + L+V L+E A+ Sbjct: 5 EEVDVIVCGGGPAGCVVAGRL----AYADPTLKVMLIEGGAN 42 >2EQ6-A nrPDB Length = 464 Score = 33.5 bits (75), Expect = 0.30, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 7/55 (12%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAF 124 D++++G GP G AA R QL L+V VE A +G L+ C+ +A Sbjct: 8 DLIVIGTGPGGYHAAIRAAQLG------LKVLAVE-AGEVGGVCLNVGCIPTKAL 55 >4K2X-A nrPDB Length = 523 Score = 32.7 bits (73), Expect = 0.44, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 27/143 (18%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH-------IGAHTLSGACLDPR 122 DVVI GAGP GL A L+ A R ++E+ A +G H + LD R Sbjct: 24 DVVIAGAGPTGLMLACELRLAGA------RTLVLERLAEPVDFSKALGVHARTVELLDMR 77 Query: 123 AFEELFP---------DWKEKGAPLNTPVTEDR--FGILTEKYRIPVPILPGLPMNNHGN 171 E F ++ G PL+ + R + + + R +L G + Sbjct: 78 GLGEGFQAEAPKLRGGNFASLGVPLDFSSFDTRHPYALFVPQVRTE-ELLTGRALELGAE 136 Query: 172 YVVRLGHLVSWMGEQAEALGVEV 194 +R GH V+ + + A+ + V V Sbjct: 137 --LRRGHAVTALEQDADGVTVSV 157 >4TXK-A nrPDB Length = 615 Score = 32.7 bits (73), Expect = 0.50, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 6/43 (13%) Query: 72 VIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTL 114 ++VGAGP GL AA L L A RV LVEK H + Sbjct: 88 LVVGAGPCGLRAAVELALLGA------RVVLVEKRIKFSRHNV 124 >4OVI-A nrPDB Length = 542 Score = 32.7 bits (73), Expect = 0.50, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 6/45 (13%) Query: 67 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGA 111 EE DV++VGAG +GL A RL++L V ++E A +G Sbjct: 15 EEVDVLVVGAGFSGLYALYRLRELGRS------VHVIETAGDVGG 53 >2BRY-A nrPDB Length = 497 Score = 32.7 bits (73), Expect = 0.50, Method: Composition-based stats. Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 6/43 (13%) Query: 72 VIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTL 114 ++VGAGP GL AA L L A RV LVEK H + Sbjct: 96 LVVGAGPCGLRAAVELALLGA------RVVLVEKRIKFSRHNV 132 >4NTC-A nrPDB Length = 335 Score = 32.7 bits (73), Expect = 0.56, Method: Composition-based stats. Identities = 14/20 (70%), Positives = 17/20 (85%) Query: 70 DVVIVGAGPAGLSAATRLKQ 89 DV+I+GAGPAGLS AT L + Sbjct: 16 DVLIIGAGPAGLSTATGLAR 35 >4Z2R-A nrPDB Length = 592 Score = 32.3 bits (72), Expect = 0.58, Method: Composition-based stats. Identities = 15/26 (57%), Positives = 18/26 (69%) Query: 66 AEEADVVIVGAGPAGLSAATRLKQLA 91 + E DV+IVGAGPAG +AT L L Sbjct: 10 SAETDVLIVGAGPAGAMSATLLASLG 35 >3NIX-A nrPDB Length = 421 Score = 32.3 bits (72), Expect = 0.63, Method: Composition-based stats. Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 10/66 (15%) Query: 62 MERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDP 121 M+R E+ DV+++GAGPAG AA+ + ++ +V +VEK + G L P Sbjct: 1 MQR--EKVDVLVIGAGPAGTVAASLV------NKSGFKVKIVEKQKF--PRFVIGESLLP 50 Query: 122 RAFEEL 127 R E L Sbjct: 51 RCMEHL 56 >5NMX-A nrPDB Length = 425 Score = 31.9 bits (71), Expect = 0.93, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 6/41 (14%) Query: 71 VVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGA 111 V ++GAGP+GL+AA LKQ V + E+ H+G Sbjct: 4 VAVLGAGPSGLTAARYLKQAG------FEVMVFERYHHVGG 38 >2Q7V-A nrPDB Length = 325 Score = 31.5 bits (70), Expect = 1.0, Method: Composition-based stats. Identities = 13/19 (68%), Positives = 16/19 (84%) Query: 66 AEEADVVIVGAGPAGLSAA 84 A + DVVI+G GPAGL+AA Sbjct: 6 AHDYDVVIIGGGPAGLTAA 24 >6AON-A nrPDB Length = 478 Score = 31.5 bits (70), Expect = 1.1, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 18/26 (69%) Query: 66 AEEADVVIVGAGPAGLSAATRLKQLA 91 +++ DVV++GAGP G AA R QL Sbjct: 5 SKQFDVVVIGAGPGGYIAAIRAAQLG 30 >5BR7-A nrPDB Length = 393 Score = 31.5 bits (70), Expect = 1.1, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 5/48 (10%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGA 117 D+++VG+G GL+ A R A+Q K +V +VEK +H+G + S A Sbjct: 5 DLIVVGSGLFGLTVAER---AASQLGK--KVLIVEKRSHLGGNAYSEA 47 >4RPJ-A nrPDB Length = 399 Score = 31.1 bits (69), Expect = 1.5, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 5/56 (8%) Query: 62 MERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGA 117 M+ D+ +VG+G GL+ A R +A Q +K RV ++E+ HIG + S A Sbjct: 1 MQPMTARFDLFVVGSGFFGLTIAER---VATQLDK--RVLVLERRPHIGGNAYSEA 51 >3II4-A nrPDB Length = 466 Score = 30.8 bits (68), Expect = 1.7, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 7/55 (12%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAF 124 DVV++GAGP G AA R QL L +VE + G L+ C+ +A Sbjct: 7 DVVVLGAGPGGYVAAIRAAQLG------LSTAIVE-PKYWGGVCLNVGCIPSKAL 54 >5MJK-A nrPDB Length = 327 Score = 30.8 bits (68), Expect = 1.8, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 8/84 (9%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELF- 128 DVVI+G+GPAG++AA + +++ L+E+ G + + +E + Sbjct: 26 DVVIIGSGPAGMTAAMYTAR------SEMKTLLLERGVPGGQMNNTAEIENYPGYETIMG 79 Query: 129 PDWKEKGA-PLNTPVTEDRFGILT 151 P+ K A PL E+ +G +T Sbjct: 80 PELSMKMAEPLEGLGVENAYGFVT 103 >5W4C-A nrPDB Length = 371 Score = 30.4 bits (67), Expect = 2.4, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 4/45 (8%) Query: 227 PKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTY 271 PK T E ++H+KV I G GH A + RAN EP Y Sbjct: 19 PKRTGEVSKKMHSKVVIIGSGPGGHTA----AIYLARANLEPVLY 59 >1I8T-A nrPDB Length = 367 Score = 30.4 bits (67), Expect = 2.4, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 6/49 (12%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGAC 118 D +IVG+G G A LK+L + +V ++EK HIG + + C Sbjct: 3 DYIIVGSGLFGAVCANELKKL------NKKVLVIEKRNHIGGNAYTEDC 45 >6IGZ-C nrPDB Length = 81 Score = 30.4 bits (67), Expect = 2.7, Method: Composition-based stats. Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 13/63 (20%) Query: 546 VNRNLSIYD---GPEQ--RFCPAGVYEFVPLEQGDGFRLQINA-----QNCVHCKTCDIK 595 ++ N+ IYD G Q R CP V E VP DG + + A ++CV CK C+ Sbjct: 1 MSHNVKIYDTCIGCTQCVRACPTDVLEMVPW---DGCKAKQIASAPRTEDCVGCKRCETA 57 Query: 596 DPS 598 P+ Sbjct: 58 CPT 60 >5ZYN-B nrPDB Length = 471 Score = 30.4 bits (67), Expect = 2.8, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 5/47 (10%) Query: 71 VVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGA 117 VV++G+G AGL+ + RL + + V L++KAA IG +++ + Sbjct: 7 VVVIGSGLAGLTTSNRLIS-----KYRIPVVLLDKAASIGGNSIKAS 48 >4GYK-A nrPDB Length = 648 Score = 30.0 bits (66), Expect = 3.0, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%) Query: 150 LTEKYRIPVPILP-GLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHED 208 LT+ Y+ P +P L ++ G V RLG ++ G A G A + I ++ Sbjct: 109 LTDDYQKASPKIPLMLSIDQEGGIVTRLGEGTNFPGNMAL--------GAARSRINAYQT 160 Query: 209 GSVKGIATNDVGIQKDGAP 227 GS+ G + +GI D +P Sbjct: 161 GSIIGKELSALGINTDFSP 179 >3C4A-A nrPDB Length = 381 Score = 30.0 bits (66), Expect = 3.6, Method: Composition-based stats. Identities = 11/19 (57%), Positives = 17/19 (89%) Query: 71 VVIVGAGPAGLSAATRLKQ 89 ++++GAGPAGL A++LKQ Sbjct: 3 ILVIGAGPAGLVFASQLKQ 21 >2R3B-A nrPDB Length = 310 Score = 30.0 bits (66), Expect = 3.6, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 3/41 (7%) Query: 58 EGVNMERFAEEADVVIVGAGPAGLSAATR--LKQLAAQHEK 96 E V + E+ADV+++G G GL A + LK + AQH+K Sbjct: 101 ETVLLTNVVEQADVILIGPG-LGLDATAQQILKMVLAQHQK 140 >1NAA-A nrPDB Length = 541 Score = 30.0 bits (66), Expect = 3.6, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 20/74 (27%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRA------ 123 D +IVGAGP G+ AA RL E +V L+E+ T G + P A Sbjct: 4 DYIIVGAGPGGIIAADRLS------EAGKKVLLLERGGPSTKQT-GGTYVAPWATSSGLT 56 Query: 124 -------FEELFPD 130 FE LF D Sbjct: 57 KFDIPGLFESLFTD 70 >1KNR-A nrPDB Length = 540 Score = 29.6 bits (65), Expect = 3.9, Method: Composition-based stats. Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 3/26 (11%) Query: 70 DVVIVGAGPAGLSAATRLKQLAAQHE 95 DV+I+G+G AGLS A R LA QH+ Sbjct: 10 DVLIIGSGAAGLSLALR---LADQHQ 32 >3BI4-A nrPDB Length = 516 Score = 29.6 bits (65), Expect = 4.0, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 6/36 (16%) Query: 71 VVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKA 106 V+I+GAG AGL AA+ L H+ ++ CLV +A Sbjct: 11 VIIIGAGIAGLKAASTL------HQNGIQDCLVLEA 40 >2CVJ-A nrPDB Length = 180 Score = 29.6 bits (65), Expect = 4.6, Method: Composition-based stats. Identities = 12/20 (60%), Positives = 16/20 (80%) Query: 70 DVVIVGAGPAGLSAATRLKQ 89 DV++VG GP+GLSAA L + Sbjct: 3 DVIVVGGGPSGLSAALFLAR 22 >4B1B-A nrPDB Length = 542 Score = 29.2 bits (64), Expect = 4.8, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 29/116 (25%) Query: 62 MERFAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRV--------------------- 100 +E + D V++G GP G+++A K+ AA + L Sbjct: 36 VEEHTYDYDYVVIGGGPGGMASA---KEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNV 92 Query: 101 -CLVEKAAHIGAHTLSGACLDPRA----FEELFPDWKEKGAPLNTPVTEDRFGILT 151 C+ +K H H S LD +A F+ L DWK+ + + + F +T Sbjct: 93 GCVPKKLMHYAGHMGSIFKLDSKAYGWKFDNLKHDWKKLVTTVQSHIRSLNFSYMT 148 >2QA2-A nrPDB Length = 499 Score = 29.2 bits (64), Expect = 5.5, Method: Composition-based stats. Identities = 12/21 (57%), Positives = 16/21 (76%) Query: 68 EADVVIVGAGPAGLSAATRLK 88 +A V++VGAGPAGL A L+ Sbjct: 12 DASVIVVGAGPAGLMLAGELR 32 >3L1R-A nrPDB Length = 478 Score = 28.8 bits (63), Expect = 7.6, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 5/41 (12%) Query: 71 VVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGA 111 V++VGAG +G+SAA RL + + ++E HIG Sbjct: 7 VIVVGAGMSGISAAKRLSEAGITD-----LLILEATDHIGG 42 >3K30-A nrPDB Length = 690 Score = 28.8 bits (63), Expect = 8.0, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 18/31 (58%) Query: 57 WEGVNMERFAEEADVVIVGAGPAGLSAATRL 87 W + +A V++VGAGP+GL AA L Sbjct: 380 WHPERIRAKESDARVLVVGAGPSGLEAARAL 410 >4Y4N-A nrPDB Length = 286 Score = 28.4 bits (62), Expect = 9.9, Method: Composition-based stats. Identities = 11/17 (64%), Positives = 14/17 (82%) Query: 68 EADVVIVGAGPAGLSAA 84 + DV IVG GP+GL+AA Sbjct: 52 DVDVAIVGGGPSGLTAA 68 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.319 0.138 0.441 Lambda K H 0.267 0.0425 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,752,902 Number of Sequences: 36641 Number of extensions: 1410682 Number of successful extensions: 3286 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 79 Number of HSP's that attempted gapping in prelim test: 3181 Number of HSP's gapped (non-prelim): 173 length of query: 617 length of database: 10,336,785 effective HSP length: 103 effective length of query: 514 effective length of database: 6,562,762 effective search space: 3373259668 effective search space used: 3373259668 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 62 (28.4 bits)