BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P55064 (265 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3D9S-A nrPDB 530 e-151 4OJ2-X nrPDB 352 8e-98 4NEF-A nrPDB 328 2e-90 1YMG-A nrPDB 276 5e-75 3M9I-A nrPDB 259 9e-70 2ZZ9-A nrPDB 239 1e-63 3IYZ-A nrPDB 239 1e-63 3GD8-A nrPDB 230 6e-61 1IH5-A nrPDB 228 2e-60 1J4N-A nrPDB 222 1e-58 5I32-A nrPDB 136 9e-33 3CLL-A nrPDB 135 1e-32 3LLQ-A nrPDB 100 4e-22 2O9F-A nrPDB 99 1e-21 2EVU-A nrPDB 97 6e-21 2W1P-A nrPDB 92 2e-19 3NE2-A nrPDB 91 4e-19 1LDI-A nrPDB 76 2e-14 3C02-A nrPDB 54 6e-08 6F7H-A nrPDB 45 3e-05 1LVL-A nrPDB 30 0.85 6OAZ-A nrPDB 29 1.9 4KJS-A nrPDB 29 2.7 >3D9S-A nrPDB Length = 266 Score = 530 bits (1364), Expect = e-151, Method: Compositional matrix adjust. Identities = 264/264 (100%), Positives = 264/264 (100%) Query: 2 KKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALG 61 KKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALG Sbjct: 3 KKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALG 62 Query: 62 PVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNA 121 PVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNA Sbjct: 63 PVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNA 122 Query: 122 LNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTG 181 LNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTG Sbjct: 123 LNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTG 182 Query: 182 CSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKG 241 CSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKG Sbjct: 183 CSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKG 242 Query: 242 TYEPDEDWEEQREERKKTMELTTR 265 TYEPDEDWEEQREERKKTMELTTR Sbjct: 243 TYEPDEDWEEQREERKKTMELTTR 266 >4OJ2-X nrPDB Length = 274 Score = 352 bits (904), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 171/261 (65%), Positives = 213/261 (81%), Gaps = 2/261 (0%) Query: 4 EVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPV 63 E+ S+AF +AVFAEFLATL+FVFFGLGSAL WP ALP++LQIA+AFGL IGTL QALG + Sbjct: 6 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHI 65 Query: 64 SGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALN 123 SG HINPA+T+A LVG +S+LRA FYVAAQL+GA+AGA +L+ + P + RG+LAVNAL+ Sbjct: 66 SGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALS 125 Query: 124 NNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCS 183 N+TT GQA+ VEL LT QL LCIFASTD RR G+PALSIG SV LGHL+GI++TGCS Sbjct: 126 NSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCS 185 Query: 184 MNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKGTY 243 MNPARS PAVV +F HWVFW+GP+VGA+L ++LY Y+LFP + SLSER+A++KG Sbjct: 186 MNPARSLAPAVVTGKFDD-HWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKG-L 243 Query: 244 EPDEDWEEQREERKKTMELTT 264 EPD DWEE+ R++ +EL + Sbjct: 244 EPDTDWEEREVRRRQAVELHS 264 >4NEF-A nrPDB Length = 242 Score = 328 bits (840), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 163/243 (67%), Positives = 200/243 (82%), Gaps = 2/243 (0%) Query: 3 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGP 62 E+ S+AF +AVFAEFLATL+FVFFGLGSAL WP ALP++LQIA+AFGL IGTL QALG Sbjct: 2 SELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGH 61 Query: 63 VSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNAL 122 +SG HINPA+T+A LVG +S+LRA FYVAAQL+GA+AGA +L+ + P + RG+LAVNAL Sbjct: 62 ISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNAL 121 Query: 123 NNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGC 182 +N+TT GQA+ VEL LT QL LCIFASTD RR G+PALSIG SV LGHL+GI++TGC Sbjct: 122 SNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGC 181 Query: 183 SMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKGT 242 SMNPARS PAVV +F HWVFW+GP+VGA+L ++LY Y+LFP + SLSER+A++KG Sbjct: 182 SMNPARSLAPAVVTGKFDD-HWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKG- 239 Query: 243 YEP 245 EP Sbjct: 240 LEP 242 >1YMG-A nrPDB Length = 263 Score = 276 bits (707), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 139/262 (53%), Positives = 190/262 (72%), Gaps = 3/262 (1%) Query: 4 EVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPV 63 E+ S +F +A+ AEF A+L +VFFGLG++L+W +LQ+ALAFGLA+ TL QA+G + Sbjct: 3 ELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHI 62 Query: 64 SGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALN 123 SG H+NPA+T A LVG+Q+SLLRA Y+ AQL+GA+AGA +LY V P RGNLA+N L+ Sbjct: 63 SGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLH 122 Query: 124 NNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCS 183 + GQA +VE+ LT Q LCIFA+ D RR +GS AL++G S+TLGHL G+Y+TG Sbjct: 123 PGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAG 182 Query: 184 MNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKGTY 243 MNPARSF PA++ F+ HWV+WVGP++GA L ++LY +LLFP S+SER++I+KG+ Sbjct: 183 MNPARSFAPAILTRNFT-NHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGS- 240 Query: 244 EPDEDWEEQREERKKTMELTTR 265 P E Q E + +EL T+ Sbjct: 241 RPSES-NGQPEVTGEPVELKTQ 261 >3M9I-A nrPDB Length = 220 Score = 259 bits (662), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 126/220 (57%), Positives = 166/220 (75%), Gaps = 1/220 (0%) Query: 9 AFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHI 68 +F +A+FAEF ATL +VFFGLG++L+W +LQ+ALAFGLA+ TL QA+G +SG H+ Sbjct: 2 SFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHV 61 Query: 69 NPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQ 128 NPA+T A LVG+Q+SLLRA YV AQL+GA+AGA +LY V P RGNLA+N L+ + Sbjct: 62 NPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSV 121 Query: 129 GQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCSMNPAR 188 GQA +VE+ LT Q LCIFA+ D RR +GS AL++G S+TLGHL G+Y+TG MNPAR Sbjct: 122 GQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPAR 181 Query: 189 SFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN 228 SF PA++ F+ HWV+WVGP++GA L ++LY +LLFP Sbjct: 182 SFAPAILTRNFT-NHWVYWVGPVIGAGLGSLLYDFLLFPR 220 >2ZZ9-A nrPDB Length = 301 Score = 239 bits (610), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 129/266 (48%), Positives = 169/266 (63%), Gaps = 12/266 (4%) Query: 3 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKW---PSALP-TILQIALAFGLAIGTLAQ 58 K V + AF KAV AEFLA LIFV +GS + W + LP ++ I+L FGL+I T+ Q Sbjct: 5 KGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQ 64 Query: 59 ALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLA 118 G +SGGHINPA+T+A++ +IS+ ++ FY+ AQ +GAI GAGILY V P + G L Sbjct: 65 CFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLG 124 Query: 119 VNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIY 178 V ++ N T G ++VELI+TFQL IFAS D +RT GS AL+IG SV +GHL I Sbjct: 125 VTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAIN 184 Query: 179 FTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN-------SLS 231 +TG SMNPARSFGPAV+M + HW++WVGPI+GAVLA LY Y+ P+ + Sbjct: 185 YTGASMNPARSFGPAVIMGNWEN-HWIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKEA 243 Query: 232 LSERVAIIKGTYEPDEDWEEQREERK 257 S+ KG+Y ED Q E Sbjct: 244 FSKAAQQTKGSYMEVEDNRSQVETED 269 >3IYZ-A nrPDB Length = 340 Score = 239 bits (609), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 129/266 (48%), Positives = 169/266 (63%), Gaps = 12/266 (4%) Query: 3 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKW---PSALP-TILQIALAFGLAIGTLAQ 58 K V + AF KAV AEFLA LIFV +GS + W + LP ++ I+L FGL+I T+ Q Sbjct: 44 KGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQ 103 Query: 59 ALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLA 118 G +SGGHINPA+T+A++ +IS+ ++ FY+ AQ +GAI GAGILY V P + G L Sbjct: 104 CFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLG 163 Query: 119 VNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIY 178 V ++ N T G ++VELI+TFQL IFAS D +RT GS AL+IG SV +GHL I Sbjct: 164 VTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAIN 223 Query: 179 FTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN-------SLS 231 +TG SMNPARSFGPAV+M + HW++WVGPI+GAVLA LY Y+ P+ + Sbjct: 224 YTGASMNPARSFGPAVIMGNWE-NHWIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKEA 282 Query: 232 LSERVAIIKGTYEPDEDWEEQREERK 257 S+ KG+Y ED Q E Sbjct: 283 FSKAAQQTKGSYMEVEDNRSQVETED 308 >3GD8-A nrPDB Length = 223 Score = 230 bits (586), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 122/223 (54%), Positives = 155/223 (69%), Gaps = 5/223 (2%) Query: 9 AFLKAVFAEFLATLIFVFFGLGSALKW---PSALPT-ILQIALAFGLAIGTLAQALGPVS 64 AF KAV AEFLA LIFV LGS + W LP ++ I+L FGL+I T+ Q G +S Sbjct: 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHIS 61 Query: 65 GGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNN 124 GGHINPA+T+A++ +IS+ ++ FY+AAQ +GAI GAGILY V P + G L V ++ Sbjct: 62 GGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHG 121 Query: 125 NTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCSM 184 N T G ++VELI+TFQL IFAS DS+RT GS AL+IG SV +GHL I +TG SM Sbjct: 122 NLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFAINYTGASM 181 Query: 185 NPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFP 227 NPARSFGPAV+M + HW++WVGPI+GAVLA LY Y+ P Sbjct: 182 NPARSFGPAVIMGNWE-NHWIYWVGPIIGAVLAGGLYEYVFCP 223 >1IH5-A nrPDB Length = 269 Score = 228 bits (581), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 124/268 (46%), Positives = 167/268 (62%), Gaps = 12/268 (4%) Query: 1 MKKEVCSVAFLKAVFAEFLATLIFVFFGLGSAL--KWP-----SALPTILQIALAFGLAI 53 M E F +AV AEFLAT +FVF +GSAL K+P +A+ ++++LAFGL+I Sbjct: 1 MASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSI 60 Query: 54 GTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNA 113 TLAQ++G +SG H+NPA+TL LL+ QIS+ RA Y+ AQ VGAI IL G+ Sbjct: 61 ATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLT 120 Query: 114 RGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGH 173 +L N L + GQ + +E+I T QL LC+ A+TD RR GS L+IGLSV LGH Sbjct: 121 GNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGH 180 Query: 174 LVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLS 233 L+ I +TGC +NPARSFG AV+ + FS HW+FWVGP +G LA ++Y ++L P S L+ Sbjct: 181 LLAIDYTGCGINPARSFGSAVITHNFSN-HWIFWVGPFIGGALAVLIYDFILAPRSSDLT 239 Query: 234 ERVAIIKG----TYEPDEDWEEQREERK 257 +RV + Y+ D D R E K Sbjct: 240 DRVKVWTSGQVEEYDLDADDINSRVEMK 267 >1J4N-A nrPDB Length = 271 Score = 222 bits (566), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 121/270 (44%), Positives = 166/270 (61%), Gaps = 14/270 (5%) Query: 1 MKKEVCSVAFLKAVFAEFLATLIFVFFGLGSAL--KWP-------SALPTILQIALAFGL 51 M E F +AV AEFLA ++F+F +GSAL +P A+ ++++LAFGL Sbjct: 1 MASEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGL 60 Query: 52 AIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPL 111 +I TLAQ++G +SG H+NPA+TL LL+ QIS+LRA Y+ AQ VGAI IL G+ Sbjct: 61 SIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSS 120 Query: 112 NARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTL 171 +L +NAL GQ + +E+I T QL LC+ A+TD RR GS L+IG SV L Sbjct: 121 LPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVAL 180 Query: 172 GHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLS 231 GHL+ I +TGC +NPARSFG +V+ + F HW+FWVGP +GA LA ++Y ++L P S Sbjct: 181 GHLLAIDYTGCGINPARSFGSSVITHNFQD-HWIFWVGPFIGAALAVLIYDFILAPRSSD 239 Query: 232 LSERVAIIKG----TYEPDEDWEEQREERK 257 L++RV + Y+ D D R E K Sbjct: 240 LTDRVKVWTSGQVEEYDLDADDINSRVEMK 269 >5I32-A nrPDB Length = 275 Score = 136 bits (343), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 95/230 (41%), Positives = 139/230 (60%), Gaps = 18/230 (7%) Query: 3 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKW-----PSAL--PTILQIALAFGLAIGT 55 + S+A L+A AEF++TL+FVF G+GSA+ + +AL P ++ IA+ G A+ Sbjct: 35 DDSFSLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFAL-F 93 Query: 56 LAQALGP-VSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNAR 114 +A A+G +SGGH+NPA+T L VG QI+++ FY AQL+G+ A +L V Sbjct: 94 VAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYV-----T 148 Query: 115 GNLAVNALNNNTTQG--QAMVVELILTFQLALCIFASTDSRRTSPVGSPA-LSIGLSVTL 171 G LAV + G + +V+E+I+TF L ++A+ + +G+ A L+IGL V Sbjct: 149 GGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGA 208 Query: 172 GHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILY 221 L F+G SMNPARSFGPAV FS HWV+WVGP++G LA ++Y Sbjct: 209 NILAAGPFSGGSMNPARSFGPAVAAGDFS-GHWVYWVGPLIGGGLAGLIY 257 >3CLL-A nrPDB Length = 300 Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 88/231 (38%), Positives = 131/231 (56%), Gaps = 16/231 (6%) Query: 9 AFLKAVFAEFLATLIFVFFGLGSALKWPSALPT-----ILQIALAFGLAIGTLAQALGPV 63 +F +A AEF+ATL+F++ + + + +L IA AFG I L + Sbjct: 55 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGI 114 Query: 64 SGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGIL--YGVAPLNARGNLAVNA 121 SGGHINPA+T L + ++ LLRA Y+ AQ +GAI G G++ + P N G A N+ Sbjct: 115 SGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGA-NS 173 Query: 122 LNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS-----PVGSPALSIGLSVTLGHLVG 176 + +G A+ E+I TF L +F++TD +R++ P+ +P L IG +V + HL Sbjct: 174 VALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAP-LPIGFAVFMVHLAT 232 Query: 177 IYFTGCSMNPARSFGPAVVM--NRFSPAHWVFWVGPIVGAVLAAILYFYLL 225 I TG +NPARSFG AV+ N+ W+FWVGP +GA +AA + Y+L Sbjct: 233 IPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVL 283 >3LLQ-A nrPDB Length = 256 Score = 100 bits (250), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 83/222 (37%), Positives = 122/222 (54%), Gaps = 15/222 (6%) Query: 12 KAVFAEFLATLIFVFFGLGSALKWPSALPTI----LQIALAFGLAIGTLAQALGPVSGGH 67 + + AEF T VF G GSA+ + +A P + +ALAFGL + T+A A+G +SGGH Sbjct: 31 RKLLAEFFGTFWLVFGGCGSAV-FAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGH 89 Query: 68 INPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNAR---GNLAVNALNN 124 NPA+++ L V + YV AQ+ GAI A LY +A A G A N Sbjct: 90 FNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGE 149 Query: 125 NTTQG----QAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFT 180 ++ G A+++E+ILT + I ST R P G ++IGL++TL HL+ I T Sbjct: 150 HSPGGYSLVSALLIEIILTAFFLIVILGSTHGRV--PAGFAPIAIGLALTLIHLISIPVT 207 Query: 181 GCSMNPARSFGPAVVMNRFSPAH-WVFWVGPIVGAVLAAILY 221 S+NPARS G A+ + ++ W+FW+ PIVG A+++ Sbjct: 208 NTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIW 249 >2O9F-A nrPDB Length = 234 Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 76/205 (37%), Positives = 105/205 (51%), Gaps = 15/205 (7%) Query: 16 AEFLATLIFVFFGLGSAL---KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAI 72 AE T VF G GSA+ +P +ALAFGL + T+A A+G +SGGH NPA+ Sbjct: 10 AESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAV 69 Query: 73 TLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLN-----ARGNLAVNALNNNTT 127 T+ L G + YV AQ+VG I A +LY +A A A N ++ Sbjct: 70 TIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSP 129 Query: 128 QG----QAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCS 183 G A+VVEL+L+ L I +TD + +P G ++IGL+ TL HL+ I T S Sbjct: 130 GGYSMLSALVVELVLSAGFLLVIHGATD--KFAPAGFAPIAIGLACTLIHLISIPVTNTS 187 Query: 184 MNPARSFGPAVVMNRFSPAH-WVFW 207 +NPARS A+ ++ W FW Sbjct: 188 VNPARSTAVAIFQGGWALEQLWFFW 212 >2EVU-A nrPDB Length = 246 Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 89/248 (35%), Positives = 120/248 (48%), Gaps = 37/248 (14%) Query: 8 VAFLKAVFAEFLATLIFVFFGLGSAL---------KWPSALPTI----------LQIALA 48 V+ K AEF+ T I VFFG GSA P+ + I LA Sbjct: 2 VSLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLA 61 Query: 49 FGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV 108 FG AI ALG +SG HINPA+T+ L + Y+ AQL+GA G+ I Sbjct: 62 FGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQC 121 Query: 109 APLNAR--GNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIG 166 A + A G L A + QAM+ E++ TF L + I R +P G + IG Sbjct: 122 AGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDER-APKGFAGIIIG 180 Query: 167 LSV-----TLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAH-W----VFWVGPIVGAVL 216 L+V TLG++ +G S+NPAR+FGP + F+ W ++ +GPIVGAVL Sbjct: 181 LTVAGIITTLGNI-----SGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVL 235 Query: 217 AAILYFYL 224 AA+ Y YL Sbjct: 236 AALTYQYL 243 >2W1P-A nrPDB Length = 279 Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 8/177 (4%) Query: 42 ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAG 101 ++ FG+ +G VSGG++NPA+TLAL++ I R Q+V +A Sbjct: 87 MISFGFGFGVMVGVFITYR--VSGGNLNPAVTLALVLARAIPPFRGILMAFTQIVAGMAA 144 Query: 102 AGILYGVAPLNARGNLA-VNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGS 160 AG + P G +A NAL ++ + + +E T L L + + + + Sbjct: 145 AGAASAMTP----GEIAFANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRATWFA 200 Query: 161 PALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLA 217 P IG+++ + HL+ IY+TG +NPARSFGPAV F HW++W+GPI+GA LA Sbjct: 201 P-FVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLA 256 >3NE2-A nrPDB Length = 246 Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 87/243 (35%), Positives = 115/243 (47%), Gaps = 36/243 (14%) Query: 12 KAVFAEFLATLIFVFFGLGSAL---------KWPSALPTI----------LQIALAFGLA 52 K AE + T I VFFG G+A+ P+ I +AF LA Sbjct: 7 KRFTAEVVGTFILVFFGPGAAVITLMIANGADKPNEFNIGIGALGGLGDWFAIGMAFALA 66 Query: 53 IGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGI-LYGVAPL 111 I + +LG +SG HINPA+T+AL + Y+ AQ +GA G+ + L V P Sbjct: 67 IAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLACVGPA 126 Query: 112 NAR-GNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSV- 169 A G L A GQA++ E I TF L L I R P G L IGL+V Sbjct: 127 AATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDERAPP-GFAGLVIGLTVG 185 Query: 170 ----TLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHW----VFWVGPIVGAVLAAILY 221 T+G++ TG S+NPAR+FGP + + W ++ +GPIVGAV AA LY Sbjct: 186 GIITTIGNI-----TGSSLNPARTFGPYLGDSLMGINLWQYFPIYVIGPIVGAVAAAWLY 240 Query: 222 FYL 224 YL Sbjct: 241 NYL 243 >1LDI-A nrPDB Length = 281 Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/271 (30%), Positives = 119/271 (43%), Gaps = 44/271 (16%) Query: 16 AEFLATLIFVFFGLG--SALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAIT 73 AEFL T + +FFG+G +ALK A +I++ +GL + VSG H+NPA+T Sbjct: 13 AEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTAGVSGAHLNPAVT 72 Query: 74 LALLVGNQISLLRAFFYVAAQLVGAIAGAGILYG-------------------VAPLNAR 114 +AL + + ++ +Q+ GA A ++YG V ++ Sbjct: 73 IALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLA 132 Query: 115 GNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPA-LSIGLSV-TLG 172 G + N + QA VE+++T L I A TD P G A L IGL + +G Sbjct: 133 GTFSTYP-NPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVIG 191 Query: 173 HLVGIYFTGCSMNPARSFGPAVVM------------NRFSPAHWVFWVGPIVGAVLAAIL 220 +G TG +MNPAR FGP V R P V GPIVGA++ A Sbjct: 192 ASMGP-LTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFA 250 Query: 221 YFYLL---FPNSLSLSERVAIIKGTYEPDED 248 Y L+ P + + E K T P E Sbjct: 251 YRKLIGRHLPCDICVVEE----KETTTPSEQ 277 >3C02-A nrPDB Length = 258 Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 36/246 (14%) Query: 9 AFLKAVFAEFLATLIFVFFGLGSALKWPSA--LPTILQIALAFGLAI--GTLAQALGPVS 64 ++++ EFL T + +F G G+ + + ++ L +GLA+ G L A +S Sbjct: 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSA--KLS 65 Query: 65 GGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNAL-- 122 G H+N A+++ L N+ L + Y AQL+GA G +YG+ G ++ + + Sbjct: 66 GAHLNLAVSIGLSSINKFDLKKIPVYFFAQLLGAFVGTSTVYGL----YHGFISNSKIPQ 121 Query: 123 -------NNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALS--IGLSVTLGH 173 N + + A ELILT L L I D LS +GL + Sbjct: 122 FAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFHILKLSSVVGLIIL--- 178 Query: 174 LVGIYF---TGCSMNPARSFGP------AVVMNRFSPAHWVFW---VGPIVGAVLAAILY 221 +GI F TG ++NP+R G A + F+ ++ FW V P VG+V+ Y Sbjct: 179 CIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFY 238 Query: 222 FYLLFP 227 ++ P Sbjct: 239 DKVICP 244 >6F7H-A nrPDB Length = 301 Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 62/240 (25%), Positives = 99/240 (41%), Gaps = 31/240 (12%) Query: 12 KAVFAEFLATLIFVFFGLGSALKWPSALPT---ILQIALAFGLAIGTLAQALGPVSGGHI 68 + AEFL + + G+ + ++ T + LA LA+ G VSG H+ Sbjct: 22 RQCLAEFLGVFVLMLLTQGAVAQAVTSGETKGNFFTMFLAGSLAVTIAIYVGGNVSGAHL 81 Query: 69 NPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAG---ILYGVAPLN-ARGNLAVNALNN 124 NPA +LA+ + ++ ++ Y+ QL+ A +G +LY A N GNL V Sbjct: 82 NPAFSLAMCIVGRLPWVKLPIYILVQLLSAFCASGATYVLYHDALQNYTGGNLTVTGPKE 141 Query: 125 NT-----------TQGQAMVVELILTFQLALCIFASTDSRRTS-PVGSPALSIG-LSVTL 171 + + +++ T L + + A D R P G + +G L + L Sbjct: 142 TASIFATYPAPYLSLNNGFLDQVLGTGMLIVGLLAILDRRNKGVPAGLEPVVVGMLILAL 201 Query: 172 GHLVGIYFTGCSMNPARSFGPAVVM-------NRFSPAH---WVFWVGPIVGAVLAAILY 221 G +G G +NPAR GP + FS + WV V P+VGA + Y Sbjct: 202 GLSMGAN-CGIPLNPARDLGPRLFTYVAGWGPEVFSAGNGWWWVPVVAPLVGATVGTATY 260 >1LVL-A nrPDB Length = 458 Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust. Identities = 14/37 (37%), Positives = 20/37 (54%) Query: 146 IFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGC 182 I + DS T+PV +G+++ LGH V Y GC Sbjct: 206 ILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGC 242 >6OAZ-A nrPDB Length = 448 Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Query: 159 GSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAV 194 GSP SIG+ +GH V IY G + P + G A+ Sbjct: 188 GSPGRSIGIQKPVGH-VDIYPNGGTFQPGCNIGEAI 222 >4KJS-A nrPDB Length = 351 Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 12/77 (15%) Query: 29 LGSALKWPSAL------PTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQI 82 +GS + WPSA+ TI+ +A G A +L+ GP GG +N GN + Sbjct: 18 IGSLMHWPSAVLFAVYCVTIIALASYMGRATESLSIIAGPRIGGLLNATF------GNAV 71 Query: 83 SLLRAFFYVAAQLVGAI 99 L+ + F + L G + Sbjct: 72 ELIISMFALKEGLTGIV 88 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3D9S-A nrPDB 333 3e-92 4OJ2-X nrPDB 320 4e-88 1YMG-A nrPDB 299 8e-82 3IYZ-A nrPDB 299 1e-81 2ZZ9-A nrPDB 298 2e-81 1IH5-A nrPDB 297 3e-81 1J4N-A nrPDB 297 4e-81 4NEF-A nrPDB 287 3e-78 3M9I-A nrPDB 257 3e-69 3GD8-A nrPDB 253 4e-68 3CLL-A nrPDB 211 3e-55 1LDI-A nrPDB 192 2e-49 2EVU-A nrPDB 188 2e-48 5I32-A nrPDB 181 3e-46 3NE2-A nrPDB 179 9e-46 3LLQ-A nrPDB 174 3e-44 3C02-A nrPDB 174 3e-44 2O9F-A nrPDB 171 3e-43 2W1P-A nrPDB 167 4e-42 6F7H-A nrPDB 166 7e-42 Sequences not found previously or not previously below threshold: 3DZU-A nrPDB 30 1.1 5AGS-A nrPDB 28 5.4 6BH8-A nrPDB 27 6.6 CONVERGED! >3D9S-A nrPDB Length = 266 Score = 333 bits (855), Expect = 3e-92, Method: Composition-based stats. Identities = 264/264 (100%), Positives = 264/264 (100%) Query: 2 KKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALG 61 KKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALG Sbjct: 3 KKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALG 62 Query: 62 PVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNA 121 PVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNA Sbjct: 63 PVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNA 122 Query: 122 LNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTG 181 LNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTG Sbjct: 123 LNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTG 182 Query: 182 CSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKG 241 CSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKG Sbjct: 183 CSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKG 242 Query: 242 TYEPDEDWEEQREERKKTMELTTR 265 TYEPDEDWEEQREERKKTMELTTR Sbjct: 243 TYEPDEDWEEQREERKKTMELTTR 266 >4OJ2-X nrPDB Length = 274 Score = 320 bits (820), Expect = 4e-88, Method: Composition-based stats. Identities = 171/261 (65%), Positives = 213/261 (81%), Gaps = 2/261 (0%) Query: 4 EVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPV 63 E+ S+AF +AVFAEFLATL+FVFFGLGSAL WP ALP++LQIA+AFGL IGTL QALG + Sbjct: 6 ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHI 65 Query: 64 SGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALN 123 SG HINPA+T+A LVG +S+LRA FYVAAQL+GA+AGA +L+ + P + RG+LAVNAL+ Sbjct: 66 SGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALS 125 Query: 124 NNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCS 183 N+TT GQA+ VEL LT QL LCIFASTD RR G+PALSIG SV LGHL+GI++TGCS Sbjct: 126 NSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCS 185 Query: 184 MNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKGTY 243 MNPARS PAVV +F HWVFW+GP+VGA+L ++LY Y+LFP + SLSER+A++KG Sbjct: 186 MNPARSLAPAVVTGKF-DDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKG-L 243 Query: 244 EPDEDWEEQREERKKTMELTT 264 EPD DWEE+ R++ +EL + Sbjct: 244 EPDTDWEEREVRRRQAVELHS 264 >1YMG-A nrPDB Length = 263 Score = 299 bits (766), Expect = 8e-82, Method: Composition-based stats. Identities = 139/262 (53%), Positives = 190/262 (72%), Gaps = 3/262 (1%) Query: 4 EVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPV 63 E+ S +F +A+ AEF A+L +VFFGLG++L+W +LQ+ALAFGLA+ TL QA+G + Sbjct: 3 ELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHI 62 Query: 64 SGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALN 123 SG H+NPA+T A LVG+Q+SLLRA Y+ AQL+GA+AGA +LY V P RGNLA+N L+ Sbjct: 63 SGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLH 122 Query: 124 NNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCS 183 + GQA +VE+ LT Q LCIFA+ D RR +GS AL++G S+TLGHL G+Y+TG Sbjct: 123 PGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAG 182 Query: 184 MNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKGTY 243 MNPARSF PA++ F+ HWV+WVGP++GA L ++LY +LLFP S+SER++I+KG+ Sbjct: 183 MNPARSFAPAILTRNFT-NHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGS- 240 Query: 244 EPDEDWEEQREERKKTMELTTR 265 P E Q E + +EL T+ Sbjct: 241 RPSESN-GQPEVTGEPVELKTQ 261 >3IYZ-A nrPDB Length = 340 Score = 299 bits (765), Expect = 1e-81, Method: Composition-based stats. Identities = 127/266 (47%), Positives = 167/266 (62%), Gaps = 12/266 (4%) Query: 3 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSA----LPTILQIALAFGLAIGTLAQ 58 K V + AF KAV AEFLA LIFV +GS + W + ++ I+L FGL+I T+ Q Sbjct: 44 KGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQ 103 Query: 59 ALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLA 118 G +SGGHINPA+T+A++ +IS+ ++ FY+ AQ +GAI GAGILY V P + G L Sbjct: 104 CFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLG 163 Query: 119 VNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIY 178 V ++ N T G ++VELI+TFQL IFAS D +RT GS AL+IG SV +GHL I Sbjct: 164 VTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAIN 223 Query: 179 FTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN-------SLS 231 +TG SMNPARSFGPAV+M + HW++WVGPI+GAVLA LY Y+ P+ + Sbjct: 224 YTGASMNPARSFGPAVIMGNWE-NHWIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKEA 282 Query: 232 LSERVAIIKGTYEPDEDWEEQREERK 257 S+ KG+Y ED Q E Sbjct: 283 FSKAAQQTKGSYMEVEDNRSQVETED 308 >2ZZ9-A nrPDB Length = 301 Score = 298 bits (762), Expect = 2e-81, Method: Composition-based stats. Identities = 127/266 (47%), Positives = 167/266 (62%), Gaps = 12/266 (4%) Query: 3 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSA----LPTILQIALAFGLAIGTLAQ 58 K V + AF KAV AEFLA LIFV +GS + W + ++ I+L FGL+I T+ Q Sbjct: 5 KGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQ 64 Query: 59 ALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLA 118 G +SGGHINPA+T+A++ +IS+ ++ FY+ AQ +GAI GAGILY V P + G L Sbjct: 65 CFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLG 124 Query: 119 VNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIY 178 V ++ N T G ++VELI+TFQL IFAS D +RT GS AL+IG SV +GHL I Sbjct: 125 VTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAIN 184 Query: 179 FTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN-------SLS 231 +TG SMNPARSFGPAV+M + HW++WVGPI+GAVLA LY Y+ P+ + Sbjct: 185 YTGASMNPARSFGPAVIMGNWE-NHWIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKEA 243 Query: 232 LSERVAIIKGTYEPDEDWEEQREERK 257 S+ KG+Y ED Q E Sbjct: 244 FSKAAQQTKGSYMEVEDNRSQVETED 269 >1IH5-A nrPDB Length = 269 Score = 297 bits (760), Expect = 3e-81, Method: Composition-based stats. Identities = 122/268 (45%), Positives = 165/268 (61%), Gaps = 12/268 (4%) Query: 1 MKKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKW-------PSALPTILQIALAFGLAI 53 M E F +AV AEFLAT +FVF +GSAL + +A+ ++++LAFGL+I Sbjct: 1 MASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSI 60 Query: 54 GTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNA 113 TLAQ++G +SG H+NPA+TL LL+ QIS+ RA Y+ AQ VGAI IL G+ Sbjct: 61 ATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLT 120 Query: 114 RGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGH 173 +L N L + GQ + +E+I T QL LC+ A+TD RR GS L+IGLSV LGH Sbjct: 121 GNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGH 180 Query: 174 LVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLS 233 L+ I +TGC +NPARSFG AV+ + FS HW+FWVGP +G LA ++Y ++L P S L+ Sbjct: 181 LLAIDYTGCGINPARSFGSAVITHNFS-NHWIFWVGPFIGGALAVLIYDFILAPRSSDLT 239 Query: 234 ERVAIIK----GTYEPDEDWEEQREERK 257 +RV + Y+ D D R E K Sbjct: 240 DRVKVWTSGQVEEYDLDADDINSRVEMK 267 >1J4N-A nrPDB Length = 271 Score = 297 bits (760), Expect = 4e-81, Method: Composition-based stats. Identities = 120/270 (44%), Positives = 165/270 (61%), Gaps = 14/270 (5%) Query: 1 MKKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWP---------SALPTILQIALAFGL 51 M E F +AV AEFLA ++F+F +GSAL + A+ ++++LAFGL Sbjct: 1 MASEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGL 60 Query: 52 AIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPL 111 +I TLAQ++G +SG H+NPA+TL LL+ QIS+LRA Y+ AQ VGAI IL G+ Sbjct: 61 SIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSS 120 Query: 112 NARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTL 171 +L +NAL GQ + +E+I T QL LC+ A+TD RR GS L+IG SV L Sbjct: 121 LPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVAL 180 Query: 172 GHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLS 231 GHL+ I +TGC +NPARSFG +V+ + F HW+FWVGP +GA LA ++Y ++L P S Sbjct: 181 GHLLAIDYTGCGINPARSFGSSVITHNFQ-DHWIFWVGPFIGAALAVLIYDFILAPRSSD 239 Query: 232 LSERVAIIK----GTYEPDEDWEEQREERK 257 L++RV + Y+ D D R E K Sbjct: 240 LTDRVKVWTSGQVEEYDLDADDINSRVEMK 269 >4NEF-A nrPDB Length = 242 Score = 287 bits (735), Expect = 3e-78, Method: Composition-based stats. Identities = 161/239 (67%), Positives = 198/239 (82%), Gaps = 1/239 (0%) Query: 3 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGP 62 E+ S+AF +AVFAEFLATL+FVFFGLGSAL WP ALP++LQIA+AFGL IGTL QALG Sbjct: 2 SELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGH 61 Query: 63 VSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNAL 122 +SG HINPA+T+A LVG +S+LRA FYVAAQL+GA+AGA +L+ + P + RG+LAVNAL Sbjct: 62 ISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNAL 121 Query: 123 NNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGC 182 +N+TT GQA+ VEL LT QL LCIFASTD RR G+PALSIG SV LGHL+GI++TGC Sbjct: 122 SNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGC 181 Query: 183 SMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKG 241 SMNPARS PAVV +F HWVFW+GP+VGA+L ++LY Y+LFP + SLSER+A++KG Sbjct: 182 SMNPARSLAPAVVTGKF-DDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKG 239 >3M9I-A nrPDB Length = 220 Score = 257 bits (657), Expect = 3e-69, Method: Composition-based stats. Identities = 126/221 (57%), Positives = 166/221 (75%), Gaps = 1/221 (0%) Query: 8 VAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGH 67 +F +A+FAEF ATL +VFFGLG++L+W +LQ+ALAFGLA+ TL QA+G +SG H Sbjct: 1 ASFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAH 60 Query: 68 INPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTT 127 +NPA+T A LVG+Q+SLLRA YV AQL+GA+AGA +LY V P RGNLA+N L+ + Sbjct: 61 VNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVS 120 Query: 128 QGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCSMNPA 187 GQA +VE+ LT Q LCIFA+ D RR +GS AL++G S+TLGHL G+Y+TG MNPA Sbjct: 121 VGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPA 180 Query: 188 RSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN 228 RSF PA++ F+ HWV+WVGP++GA L ++LY +LLFP Sbjct: 181 RSFAPAILTRNFT-NHWVYWVGPVIGAGLGSLLYDFLLFPR 220 >3GD8-A nrPDB Length = 223 Score = 253 bits (647), Expect = 4e-68, Method: Composition-based stats. Identities = 120/224 (53%), Positives = 153/224 (68%), Gaps = 5/224 (2%) Query: 8 VAFLKAVFAEFLATLIFVFFGLGSALKWPSA----LPTILQIALAFGLAIGTLAQALGPV 63 AF KAV AEFLA LIFV LGS + W ++ I+L FGL+I T+ Q G + Sbjct: 1 QAFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHI 60 Query: 64 SGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALN 123 SGGHINPA+T+A++ +IS+ ++ FY+AAQ +GAI GAGILY V P + G L V ++ Sbjct: 61 SGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVH 120 Query: 124 NNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCS 183 N T G ++VELI+TFQL IFAS DS+RT GS AL+IG SV +GHL I +TG S Sbjct: 121 GNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFAINYTGAS 180 Query: 184 MNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFP 227 MNPARSFGPAV+M + HW++WVGPI+GAVLA LY Y+ P Sbjct: 181 MNPARSFGPAVIMGNWE-NHWIYWVGPIIGAVLAGGLYEYVFCP 223 >3CLL-A nrPDB Length = 300 Score = 211 bits (537), Expect = 3e-55, Method: Composition-based stats. Identities = 86/235 (36%), Positives = 128/235 (54%), Gaps = 14/235 (5%) Query: 4 EVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSA-----LPTILQIALAFGLAIGTLAQ 58 E+ +F +A AEF+ATL+F++ + + + +L IA AFG I L Sbjct: 50 ELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVY 109 Query: 59 ALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGIL--YGVAPLNARGN 116 +SGGHINPA+T L + ++ LLRA Y+ AQ +GAI G G++ + P N G Sbjct: 110 CTAGISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGG 169 Query: 117 LAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSP----VGSPALSIGLSVTLG 172 N++ +G A+ E+I TF L +F++TD +R++ L IG +V + Sbjct: 170 -GANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMV 228 Query: 173 HLVGIYFTGCSMNPARSFGPAVVM--NRFSPAHWVFWVGPIVGAVLAAILYFYLL 225 HL I TG +NPARSFG AV+ N+ W+FWVGP +GA +AA + Y+L Sbjct: 229 HLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVL 283 >1LDI-A nrPDB Length = 281 Score = 192 bits (487), Expect = 2e-49, Method: Composition-based stats. Identities = 80/273 (29%), Positives = 115/273 (42%), Gaps = 42/273 (15%) Query: 13 AVFAEFLATLIFVFFGLG--SALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINP 70 AEFL T + +FFG+G +ALK A +I++ +GL + VSG H+NP Sbjct: 10 QCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTAGVSGAHLNP 69 Query: 71 AITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYG-------------------VAPL 111 A+T+AL + + ++ +Q+ GA A ++YG V + Sbjct: 70 AVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESV 129 Query: 112 NARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGS-PALSIGLSVT 170 + G + N + QA VE+++T L I A TD P G L IGL + Sbjct: 130 DLAGTFSTY-PNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIA 188 Query: 171 LGHLVGIYFTGCSMNPARSFGPAVVM------------NRFSPAHWVFWVGPIVGAVLAA 218 + TG +MNPAR FGP V R P V GPIVGA++ A Sbjct: 189 VIGASMGPLTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGA 248 Query: 219 ILYFYLL---FPNSLSLSERVAIIKGTYEPDED 248 Y L+ P + + E K T P E Sbjct: 249 FAYRKLIGRHLPCDICVVEE----KETTTPSEQ 277 >2EVU-A nrPDB Length = 246 Score = 188 bits (477), Expect = 2e-48, Method: Composition-based stats. Identities = 85/243 (34%), Positives = 114/243 (46%), Gaps = 27/243 (11%) Query: 8 VAFLKAVFAEFLATLIFVFFGLGSAL---------KWPSALP----------TILQIALA 48 V+ K AEF+ T I VFFG GSA P+ + I LA Sbjct: 2 VSLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLA 61 Query: 49 FGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV 108 FG AI ALG +SG HINPA+T+ L + Y+ AQL+GA G+ I Sbjct: 62 FGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQC 121 Query: 109 APLNAR--GNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIG 166 A + A G L A + QAM+ E++ TF L + I R +P G + IG Sbjct: 122 AGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDER-APKGFAGIIIG 180 Query: 167 LSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRF-----SPAHWVFWVGPIVGAVLAAILY 221 L+V +G S+NPAR+FGP + F + ++ +GPIVGAVLAA+ Y Sbjct: 181 LTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTY 240 Query: 222 FYL 224 YL Sbjct: 241 QYL 243 Score = 48.1 bits (113), Expect = 4e-06, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 8/108 (7%) Query: 8 VAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGH 67 +++ +A+ AE + T + + +G A+ A I + GL + + LG +SG Sbjct: 141 ISYWQAMLAEVVGTFLLMITIMGIAVD-ERAPKGFAGIII--GLTVAGIITTLGNISGSS 197 Query: 68 INPAITLA-----LLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAP 110 +NPA T ++ YV +VGA+ A + Sbjct: 198 LNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 >5I32-A nrPDB Length = 275 Score = 181 bits (459), Expect = 3e-46, Method: Composition-based stats. Identities = 90/240 (37%), Positives = 134/240 (55%), Gaps = 16/240 (6%) Query: 3 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSAL-------PTILQIALAFGLAIGT 55 + S+A L+A AEF++TL+FVF G+GSA+ + P ++ IA+ G A+ Sbjct: 35 DDSFSLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFV 94 Query: 56 LAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARG 115 +SGGH+NPA+T L VG QI+++ FY AQL+G+ A +L V G Sbjct: 95 AVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVT-----G 149 Query: 116 NLAVNALNNNTTQG--QAMVVELILTFQLALCIFASTDSRRTSPVGS-PALSIGLSVTLG 172 LAV + G + +V+E+I+TF L ++A+ + +G+ L+IGL V Sbjct: 150 GLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGAN 209 Query: 173 HLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSL 232 L F+G SMNPARSFGPAV FS HWV+WVGP++G LA ++Y + +S + Sbjct: 210 ILAAGPFSGGSMNPARSFGPAVAAGDFS-GHWVYWVGPLIGGGLAGLIYGNVFMGSSEHV 268 >3NE2-A nrPDB Length = 246 Score = 179 bits (455), Expect = 9e-46, Method: Composition-based stats. Identities = 82/243 (33%), Positives = 110/243 (45%), Gaps = 26/243 (10%) Query: 7 SVAFLKAVFAEFLATLIFVFFGLGSAL---------KWPSALP----------TILQIAL 47 ++ K AE + T I VFFG G+A+ P+ I + Sbjct: 2 TMTLAKRFTAEVVGTFILVFFGPGAAVITLMIANGADKPNEFNIGIGALGGLGDWFAIGM 61 Query: 48 AFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYG 107 AF LAI + +LG +SG HINPA+T+AL + Y+ AQ +GA G+ + Sbjct: 62 AFALAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLA 121 Query: 108 VAPLNAR--GNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSI 165 A G L A GQA++ E I TF L L I R +P G L I Sbjct: 122 CVGPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDER-APPGFAGLVI 180 Query: 166 GLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHW----VFWVGPIVGAVLAAILY 221 GL+V TG S+NPAR+FGP + + W ++ +GPIVGAV AA LY Sbjct: 181 GLTVGGIITTIGNITGSSLNPARTFGPYLGDSLMGINLWQYFPIYVIGPIVGAVAAAWLY 240 Query: 222 FYL 224 YL Sbjct: 241 NYL 243 Score = 44.6 bits (104), Expect = 4e-05, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 7/106 (6%) Query: 8 VAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGH 67 + + +A+ E + T + + +G A+ A P L GL +G + +G ++G Sbjct: 142 IGYGQAILTEAIGTFLLMLVIMGVAVD-ERAPPGFA--GLVIGLTVGGIITTIGNITGSS 198 Query: 68 INPAITLALLVGNQISLLRA----FFYVAAQLVGAIAGAGILYGVA 109 +NPA T +G+ + + YV +VGA+A A + +A Sbjct: 199 LNPARTFGPYLGDSLMGINLWQYFPIYVIGPIVGAVAAAWLYNYLA 244 >3LLQ-A nrPDB Length = 256 Score = 174 bits (442), Expect = 3e-44, Method: Composition-based stats. Identities = 83/229 (36%), Positives = 120/229 (52%), Gaps = 13/229 (5%) Query: 5 VCSVAFLKAVFAEFLATLIFVFFGLGSAL---KWPSALPTILQIALAFGLAIGTLAQALG 61 S + + AEF T VF G GSA+ +P +ALAFGL + T+A A+G Sbjct: 24 FQSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVG 83 Query: 62 PVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNAR---GNLA 118 +SGGH NPA+++ L V + YV AQ+ GAI A LY +A A G A Sbjct: 84 GISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFA 143 Query: 119 VNALNNNTTQG----QAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHL 174 N ++ G A+++E+ILT + I ST R P G ++IGL++TL HL Sbjct: 144 SNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGR--VPAGFAPIAIGLALTLIHL 201 Query: 175 VGIYFTGCSMNPARSFGPAVVMNRFSPAH-WVFWVGPIVGAVLAAILYF 222 + I T S+NPARS G A+ + ++ W+FW+ PIVG A+++ Sbjct: 202 ISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWK 250 >3C02-A nrPDB Length = 258 Score = 174 bits (442), Expect = 3e-44, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 26/245 (10%) Query: 5 VCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSAL--PTILQIALAFGLAIGTLAQALGP 62 + ++++ EFL T + +F G G+ + + ++ L +GLA+ Sbjct: 4 LFYKSYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAK 63 Query: 63 VSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNAL 122 +SG H+N A+++ L N+ L + Y AQL+GA G +YG+ G ++ + + Sbjct: 64 LSGAHLNLAVSIGLSSINKFDLKKIPVYFFAQLLGAFVGTSTVYGL----YHGFISNSKI 119 Query: 123 ---------NNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPAL--SIGLSVTL 171 N + + A ELILT L L I D L +GL + Sbjct: 120 PQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFHILKLSSVVGLIILC 179 Query: 172 GHLVGIYFTGCSMNPARSFGP------AVVMNRFSPAHWVFW---VGPIVGAVLAAILYF 222 + TG ++NP+R G A + F+ ++ FW V P VG+V+ Y Sbjct: 180 IGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYD 239 Query: 223 YLLFP 227 ++ P Sbjct: 240 KVICP 244 >2O9F-A nrPDB Length = 234 Score = 171 bits (434), Expect = 3e-43, Method: Composition-based stats. Identities = 84/231 (36%), Positives = 119/231 (51%), Gaps = 15/231 (6%) Query: 12 KAVFAEFLATLIFVFFGLGSAL---KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHI 68 + + AE T VF G GSA+ +P +ALAFGL + T+A A+G +SGGH Sbjct: 6 RKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHF 65 Query: 69 NPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLN-----ARGNLAVNALN 123 NPA+T+ L G + YV AQ+VG I A +LY +A A A N Sbjct: 66 NPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYG 125 Query: 124 NNTTQG----QAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYF 179 ++ G A+VVEL+L+ L I +TD + +P G ++IGL+ TL HL+ I Sbjct: 126 EHSPGGYSMLSALVVELVLSAGFLLVIHGATD--KFAPAGFAPIAIGLACTLIHLISIPV 183 Query: 180 TGCSMNPARSFGPAVVMNRFSPAH-WVFWVGPIVGAVLAAILYFYLLFPNS 229 T S+NPARS A+ ++ W FWV PIVG ++ ++Y LL Sbjct: 184 TNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRD 234 >2W1P-A nrPDB Length = 279 Score = 167 bits (424), Expect = 4e-42, Method: Composition-based stats. Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 13/219 (5%) Query: 13 AVFAEFLATLIFVF--FGLGSALKWPSALPT-------ILQIALAFGLAIGTLAQALGPV 63 A+ EF+ T +F++ F + P ++ I+ FG + V Sbjct: 47 AMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRV 106 Query: 64 SGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALN 123 SGG++NPA+TLAL++ I R Q+V +A AG + P NAL Sbjct: 107 SGGNLNPAVTLALVLARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIA---FANALG 163 Query: 124 NNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCS 183 ++ + + +E T L L + + + IG+++ + HL+ IY+TG Sbjct: 164 GGASRTRGLFLEAFGTAILCLTVLMLAVEKHRATW-FAPFVIGIALLIAHLICIYYTGAG 222 Query: 184 MNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYF 222 +NPARSFGPAV F HW++W+GPI+GA LA ++ Sbjct: 223 LNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQ 261 >6F7H-A nrPDB Length = 301 Score = 166 bits (421), Expect = 7e-42, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 99/245 (40%), Gaps = 31/245 (12%) Query: 12 KAVFAEFLATLIFVFFGLGSALKWPSALPT---ILQIALAFGLAIGTLAQALGPVSGGHI 68 + AEFL + + G+ + ++ T + LA LA+ G VSG H+ Sbjct: 22 RQCLAEFLGVFVLMLLTQGAVAQAVTSGETKGNFFTMFLAGSLAVTIAIYVGGNVSGAHL 81 Query: 69 NPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAG---ILYGVAPLNARGN--------- 116 NPA +LA+ + ++ ++ Y+ QL+ A +G +LY A N G Sbjct: 82 NPAFSLAMCIVGRLPWVKLPIYILVQLLSAFCASGATYVLYHDALQNYTGGNLTVTGPKE 141 Query: 117 ---LAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS-PVGSPALSIG-LSVTL 171 + + + +++ T L + + A D R P G + +G L + L Sbjct: 142 TASIFATYPAPYLSLNNGFLDQVLGTGMLIVGLLAILDRRNKGVPAGLEPVVVGMLILAL 201 Query: 172 GHLVGIYFTGCSMNPARSFGPAVVM-------NRFSPAH---WVFWVGPIVGAVLAAILY 221 G +G G +NPAR GP + FS + WV V P+VGA + Y Sbjct: 202 GLSMGAN-CGIPLNPARDLGPRLFTYVAGWGPEVFSAGNGWWWVPVVAPLVGATVGTATY 260 Query: 222 FYLLF 226 L+ Sbjct: 261 QLLVA 265 >3DZU-A nrPDB Length = 467 Score = 30.0 bits (66), Expect = 1.1, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 3/94 (3%) Query: 99 IAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVEL---ILTFQLALCIFASTDSRRT 155 + + + RG++A +L+ + G +L I T + S + Sbjct: 15 MFSTQVNSSLTSPTGRGSMAAPSLHPSLGPGIGSPGQLHSPISTLSSPINGMGPPFSVIS 74 Query: 156 SPVGSPALSIGLSVTLGHLVGIYFTGCSMNPARS 189 SP+G ++S+ + TLG G MNP S Sbjct: 75 SPMGPHSMSVPTTPTLGFSTGSPQLSSPMNPVSS 108 >5AGS-A nrPDB Length = 232 Score = 27.7 bits (60), Expect = 5.4, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Query: 18 FLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVS 64 F+A + +G G+ + P A AFGL I + A G +S Sbjct: 145 FIADYVLAGYGTGAIMAVPGHDQRDWDFARAFGLPIVEVI-AGGNIS 190 >6BH8-A nrPDB Length = 483 Score = 27.3 bits (59), Expect = 6.6, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 24/120 (20%) Query: 7 SVAFLKAVFAEFLATLIFVFFGL-------GSALKWPSALPTI-LQIALAFGLAIGTLAQ 58 + +F +++E TLI +F G+ G + P + +L F L + TL Sbjct: 76 TFSFWSGLYSETEGTLILLFGGIPYLWRLSGRFCGYAGFGPEYEITQSLVF-LLLATLFS 134 Query: 59 ALGPVSGGHINPAI----------TLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV 108 AL + N + TL + + I +V Q + + +LY + Sbjct: 135 ALAGLPWSLYNTFVIEEKHGFNQQTLGFFMKDAIKK-----FVVTQCILLPVSSLLLYII 189 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.316 0.138 0.368 Lambda K H 0.267 0.0423 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,911,426 Number of Sequences: 36641 Number of extensions: 323786 Number of successful extensions: 1376 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 43 Number of HSP's successfully gapped in prelim test: 33 Number of HSP's that attempted gapping in prelim test: 1179 Number of HSP's gapped (non-prelim): 83 length of query: 265 length of database: 10,336,785 effective HSP length: 95 effective length of query: 170 effective length of database: 6,855,890 effective search space: 1165501300 effective search space used: 1165501300 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.1 bits) S2: 58 (26.9 bits)