BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P55064
         (265 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3D9S-A nrPDB                                                          530   e-151
4OJ2-X nrPDB                                                          352   8e-98
4NEF-A nrPDB                                                          328   2e-90
1YMG-A nrPDB                                                          276   5e-75
3M9I-A nrPDB                                                          259   9e-70
2ZZ9-A nrPDB                                                          239   1e-63
3IYZ-A nrPDB                                                          239   1e-63
3GD8-A nrPDB                                                          230   6e-61
1IH5-A nrPDB                                                          228   2e-60
1J4N-A nrPDB                                                          222   1e-58
5I32-A nrPDB                                                          136   9e-33
3CLL-A nrPDB                                                          135   1e-32
3LLQ-A nrPDB                                                          100   4e-22
2O9F-A nrPDB                                                           99   1e-21
2EVU-A nrPDB                                                           97   6e-21
2W1P-A nrPDB                                                           92   2e-19
3NE2-A nrPDB                                                           91   4e-19
1LDI-A nrPDB                                                           76   2e-14
3C02-A nrPDB                                                           54   6e-08
6F7H-A nrPDB                                                           45   3e-05
1LVL-A nrPDB                                                           30   0.85 
6OAZ-A nrPDB                                                           29   1.9  
4KJS-A nrPDB                                                           29   2.7  

>3D9S-A nrPDB
          Length = 266

 Score =  530 bits (1364), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 264/264 (100%), Positives = 264/264 (100%)

Query: 2   KKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALG 61
           KKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALG
Sbjct: 3   KKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALG 62

Query: 62  PVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNA 121
           PVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNA
Sbjct: 63  PVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNA 122

Query: 122 LNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTG 181
           LNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTG
Sbjct: 123 LNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTG 182

Query: 182 CSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKG 241
           CSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKG
Sbjct: 183 CSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKG 242

Query: 242 TYEPDEDWEEQREERKKTMELTTR 265
           TYEPDEDWEEQREERKKTMELTTR
Sbjct: 243 TYEPDEDWEEQREERKKTMELTTR 266


>4OJ2-X nrPDB
          Length = 274

 Score =  352 bits (904), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 171/261 (65%), Positives = 213/261 (81%), Gaps = 2/261 (0%)

Query: 4   EVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPV 63
           E+ S+AF +AVFAEFLATL+FVFFGLGSAL WP ALP++LQIA+AFGL IGTL QALG +
Sbjct: 6   ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHI 65

Query: 64  SGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALN 123
           SG HINPA+T+A LVG  +S+LRA FYVAAQL+GA+AGA +L+ + P + RG+LAVNAL+
Sbjct: 66  SGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALS 125

Query: 124 NNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCS 183
           N+TT GQA+ VEL LT QL LCIFASTD RR    G+PALSIG SV LGHL+GI++TGCS
Sbjct: 126 NSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCS 185

Query: 184 MNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKGTY 243
           MNPARS  PAVV  +F   HWVFW+GP+VGA+L ++LY Y+LFP + SLSER+A++KG  
Sbjct: 186 MNPARSLAPAVVTGKFDD-HWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKG-L 243

Query: 244 EPDEDWEEQREERKKTMELTT 264
           EPD DWEE+   R++ +EL +
Sbjct: 244 EPDTDWEEREVRRRQAVELHS 264


>4NEF-A nrPDB
          Length = 242

 Score =  328 bits (840), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 163/243 (67%), Positives = 200/243 (82%), Gaps = 2/243 (0%)

Query: 3   KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGP 62
            E+ S+AF +AVFAEFLATL+FVFFGLGSAL WP ALP++LQIA+AFGL IGTL QALG 
Sbjct: 2   SELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGH 61

Query: 63  VSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNAL 122
           +SG HINPA+T+A LVG  +S+LRA FYVAAQL+GA+AGA +L+ + P + RG+LAVNAL
Sbjct: 62  ISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNAL 121

Query: 123 NNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGC 182
           +N+TT GQA+ VEL LT QL LCIFASTD RR    G+PALSIG SV LGHL+GI++TGC
Sbjct: 122 SNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGC 181

Query: 183 SMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKGT 242
           SMNPARS  PAVV  +F   HWVFW+GP+VGA+L ++LY Y+LFP + SLSER+A++KG 
Sbjct: 182 SMNPARSLAPAVVTGKFDD-HWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKG- 239

Query: 243 YEP 245
            EP
Sbjct: 240 LEP 242


>1YMG-A nrPDB
          Length = 263

 Score =  276 bits (707), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 139/262 (53%), Positives = 190/262 (72%), Gaps = 3/262 (1%)

Query: 4   EVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPV 63
           E+ S +F +A+ AEF A+L +VFFGLG++L+W      +LQ+ALAFGLA+ TL QA+G +
Sbjct: 3   ELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHI 62

Query: 64  SGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALN 123
           SG H+NPA+T A LVG+Q+SLLRA  Y+ AQL+GA+AGA +LY V P   RGNLA+N L+
Sbjct: 63  SGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLH 122

Query: 124 NNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCS 183
              + GQA +VE+ LT Q  LCIFA+ D RR   +GS AL++G S+TLGHL G+Y+TG  
Sbjct: 123 PGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAG 182

Query: 184 MNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKGTY 243
           MNPARSF PA++   F+  HWV+WVGP++GA L ++LY +LLFP   S+SER++I+KG+ 
Sbjct: 183 MNPARSFAPAILTRNFT-NHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGS- 240

Query: 244 EPDEDWEEQREERKKTMELTTR 265
            P E    Q E   + +EL T+
Sbjct: 241 RPSES-NGQPEVTGEPVELKTQ 261


>3M9I-A nrPDB
          Length = 220

 Score =  259 bits (662), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 126/220 (57%), Positives = 166/220 (75%), Gaps = 1/220 (0%)

Query: 9   AFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHI 68
           +F +A+FAEF ATL +VFFGLG++L+W      +LQ+ALAFGLA+ TL QA+G +SG H+
Sbjct: 2   SFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHV 61

Query: 69  NPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQ 128
           NPA+T A LVG+Q+SLLRA  YV AQL+GA+AGA +LY V P   RGNLA+N L+   + 
Sbjct: 62  NPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSV 121

Query: 129 GQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCSMNPAR 188
           GQA +VE+ LT Q  LCIFA+ D RR   +GS AL++G S+TLGHL G+Y+TG  MNPAR
Sbjct: 122 GQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPAR 181

Query: 189 SFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN 228
           SF PA++   F+  HWV+WVGP++GA L ++LY +LLFP 
Sbjct: 182 SFAPAILTRNFT-NHWVYWVGPVIGAGLGSLLYDFLLFPR 220


>2ZZ9-A nrPDB
          Length = 301

 Score =  239 bits (610), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 129/266 (48%), Positives = 169/266 (63%), Gaps = 12/266 (4%)

Query: 3   KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKW---PSALP-TILQIALAFGLAIGTLAQ 58
           K V + AF KAV AEFLA LIFV   +GS + W    + LP  ++ I+L FGL+I T+ Q
Sbjct: 5   KGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQ 64

Query: 59  ALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLA 118
             G +SGGHINPA+T+A++   +IS+ ++ FY+ AQ +GAI GAGILY V P +  G L 
Sbjct: 65  CFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLG 124

Query: 119 VNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIY 178
           V  ++ N T G  ++VELI+TFQL   IFAS D +RT   GS AL+IG SV +GHL  I 
Sbjct: 125 VTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAIN 184

Query: 179 FTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN-------SLS 231
           +TG SMNPARSFGPAV+M  +   HW++WVGPI+GAVLA  LY Y+  P+         +
Sbjct: 185 YTGASMNPARSFGPAVIMGNWEN-HWIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKEA 243

Query: 232 LSERVAIIKGTYEPDEDWEEQREERK 257
            S+     KG+Y   ED   Q E   
Sbjct: 244 FSKAAQQTKGSYMEVEDNRSQVETED 269


>3IYZ-A nrPDB
          Length = 340

 Score =  239 bits (609), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 129/266 (48%), Positives = 169/266 (63%), Gaps = 12/266 (4%)

Query: 3   KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKW---PSALP-TILQIALAFGLAIGTLAQ 58
           K V + AF KAV AEFLA LIFV   +GS + W    + LP  ++ I+L FGL+I T+ Q
Sbjct: 44  KGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQ 103

Query: 59  ALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLA 118
             G +SGGHINPA+T+A++   +IS+ ++ FY+ AQ +GAI GAGILY V P +  G L 
Sbjct: 104 CFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLG 163

Query: 119 VNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIY 178
           V  ++ N T G  ++VELI+TFQL   IFAS D +RT   GS AL+IG SV +GHL  I 
Sbjct: 164 VTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAIN 223

Query: 179 FTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN-------SLS 231
           +TG SMNPARSFGPAV+M  +   HW++WVGPI+GAVLA  LY Y+  P+         +
Sbjct: 224 YTGASMNPARSFGPAVIMGNWE-NHWIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKEA 282

Query: 232 LSERVAIIKGTYEPDEDWEEQREERK 257
            S+     KG+Y   ED   Q E   
Sbjct: 283 FSKAAQQTKGSYMEVEDNRSQVETED 308


>3GD8-A nrPDB
          Length = 223

 Score =  230 bits (586), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 122/223 (54%), Positives = 155/223 (69%), Gaps = 5/223 (2%)

Query: 9   AFLKAVFAEFLATLIFVFFGLGSALKW---PSALPT-ILQIALAFGLAIGTLAQALGPVS 64
           AF KAV AEFLA LIFV   LGS + W      LP  ++ I+L FGL+I T+ Q  G +S
Sbjct: 2   AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHIS 61

Query: 65  GGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNN 124
           GGHINPA+T+A++   +IS+ ++ FY+AAQ +GAI GAGILY V P +  G L V  ++ 
Sbjct: 62  GGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHG 121

Query: 125 NTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCSM 184
           N T G  ++VELI+TFQL   IFAS DS+RT   GS AL+IG SV +GHL  I +TG SM
Sbjct: 122 NLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFAINYTGASM 181

Query: 185 NPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFP 227
           NPARSFGPAV+M  +   HW++WVGPI+GAVLA  LY Y+  P
Sbjct: 182 NPARSFGPAVIMGNWE-NHWIYWVGPIIGAVLAGGLYEYVFCP 223


>1IH5-A nrPDB
          Length = 269

 Score =  228 bits (581), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 124/268 (46%), Positives = 167/268 (62%), Gaps = 12/268 (4%)

Query: 1   MKKEVCSVAFLKAVFAEFLATLIFVFFGLGSAL--KWP-----SALPTILQIALAFGLAI 53
           M  E     F +AV AEFLAT +FVF  +GSAL  K+P     +A+   ++++LAFGL+I
Sbjct: 1   MASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSI 60

Query: 54  GTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNA 113
            TLAQ++G +SG H+NPA+TL LL+  QIS+ RA  Y+ AQ VGAI    IL G+     
Sbjct: 61  ATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLT 120

Query: 114 RGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGH 173
             +L  N L +    GQ + +E+I T QL LC+ A+TD RR    GS  L+IGLSV LGH
Sbjct: 121 GNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGH 180

Query: 174 LVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLS 233
           L+ I +TGC +NPARSFG AV+ + FS  HW+FWVGP +G  LA ++Y ++L P S  L+
Sbjct: 181 LLAIDYTGCGINPARSFGSAVITHNFSN-HWIFWVGPFIGGALAVLIYDFILAPRSSDLT 239

Query: 234 ERVAIIKG----TYEPDEDWEEQREERK 257
           +RV +        Y+ D D    R E K
Sbjct: 240 DRVKVWTSGQVEEYDLDADDINSRVEMK 267


>1J4N-A nrPDB
          Length = 271

 Score =  222 bits (566), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 121/270 (44%), Positives = 166/270 (61%), Gaps = 14/270 (5%)

Query: 1   MKKEVCSVAFLKAVFAEFLATLIFVFFGLGSAL--KWP-------SALPTILQIALAFGL 51
           M  E     F +AV AEFLA ++F+F  +GSAL   +P        A+   ++++LAFGL
Sbjct: 1   MASEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGL 60

Query: 52  AIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPL 111
           +I TLAQ++G +SG H+NPA+TL LL+  QIS+LRA  Y+ AQ VGAI    IL G+   
Sbjct: 61  SIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSS 120

Query: 112 NARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTL 171
               +L +NAL      GQ + +E+I T QL LC+ A+TD RR    GS  L+IG SV L
Sbjct: 121 LPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVAL 180

Query: 172 GHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLS 231
           GHL+ I +TGC +NPARSFG +V+ + F   HW+FWVGP +GA LA ++Y ++L P S  
Sbjct: 181 GHLLAIDYTGCGINPARSFGSSVITHNFQD-HWIFWVGPFIGAALAVLIYDFILAPRSSD 239

Query: 232 LSERVAIIKG----TYEPDEDWEEQREERK 257
           L++RV +        Y+ D D    R E K
Sbjct: 240 LTDRVKVWTSGQVEEYDLDADDINSRVEMK 269


>5I32-A nrPDB
          Length = 275

 Score =  136 bits (343), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/230 (41%), Positives = 139/230 (60%), Gaps = 18/230 (7%)

Query: 3   KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKW-----PSAL--PTILQIALAFGLAIGT 55
            +  S+A L+A  AEF++TL+FVF G+GSA+ +      +AL  P ++ IA+  G A+  
Sbjct: 35  DDSFSLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFAL-F 93

Query: 56  LAQALGP-VSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNAR 114
           +A A+G  +SGGH+NPA+T  L VG QI+++   FY  AQL+G+ A   +L  V      
Sbjct: 94  VAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYV-----T 148

Query: 115 GNLAVNALNNNTTQG--QAMVVELILTFQLALCIFASTDSRRTSPVGSPA-LSIGLSVTL 171
           G LAV   +     G  + +V+E+I+TF L   ++A+    +   +G+ A L+IGL V  
Sbjct: 149 GGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGA 208

Query: 172 GHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILY 221
             L    F+G SMNPARSFGPAV    FS  HWV+WVGP++G  LA ++Y
Sbjct: 209 NILAAGPFSGGSMNPARSFGPAVAAGDFS-GHWVYWVGPLIGGGLAGLIY 257


>3CLL-A nrPDB
          Length = 300

 Score =  135 bits (341), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 131/231 (56%), Gaps = 16/231 (6%)

Query: 9   AFLKAVFAEFLATLIFVFFGLGSALKWPSALPT-----ILQIALAFGLAIGTLAQALGPV 63
           +F +A  AEF+ATL+F++  + + +             +L IA AFG  I  L      +
Sbjct: 55  SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGI 114

Query: 64  SGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGIL--YGVAPLNARGNLAVNA 121
           SGGHINPA+T  L +  ++ LLRA  Y+ AQ +GAI G G++  +   P N  G  A N+
Sbjct: 115 SGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGA-NS 173

Query: 122 LNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS-----PVGSPALSIGLSVTLGHLVG 176
           +     +G A+  E+I TF L   +F++TD +R++     P+ +P L IG +V + HL  
Sbjct: 174 VALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAP-LPIGFAVFMVHLAT 232

Query: 177 IYFTGCSMNPARSFGPAVVM--NRFSPAHWVFWVGPIVGAVLAAILYFYLL 225
           I  TG  +NPARSFG AV+   N+     W+FWVGP +GA +AA  + Y+L
Sbjct: 233 IPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVL 283


>3LLQ-A nrPDB
          Length = 256

 Score =  100 bits (250), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 122/222 (54%), Gaps = 15/222 (6%)

Query: 12  KAVFAEFLATLIFVFFGLGSALKWPSALPTI----LQIALAFGLAIGTLAQALGPVSGGH 67
           + + AEF  T   VF G GSA+ + +A P +      +ALAFGL + T+A A+G +SGGH
Sbjct: 31  RKLLAEFFGTFWLVFGGCGSAV-FAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGH 89

Query: 68  INPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNAR---GNLAVNALNN 124
            NPA+++ L V  +        YV AQ+ GAI  A  LY +A   A    G  A N    
Sbjct: 90  FNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGE 149

Query: 125 NTTQG----QAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFT 180
           ++  G     A+++E+ILT    + I  ST  R   P G   ++IGL++TL HL+ I  T
Sbjct: 150 HSPGGYSLVSALLIEIILTAFFLIVILGSTHGRV--PAGFAPIAIGLALTLIHLISIPVT 207

Query: 181 GCSMNPARSFGPAVVMNRFSPAH-WVFWVGPIVGAVLAAILY 221
             S+NPARS G A+ +  ++    W+FW+ PIVG    A+++
Sbjct: 208 NTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIW 249


>2O9F-A nrPDB
          Length = 234

 Score = 99.4 bits (246), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 105/205 (51%), Gaps = 15/205 (7%)

Query: 16  AEFLATLIFVFFGLGSAL---KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAI 72
           AE   T   VF G GSA+    +P        +ALAFGL + T+A A+G +SGGH NPA+
Sbjct: 10  AESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAV 69

Query: 73  TLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLN-----ARGNLAVNALNNNTT 127
           T+ L  G +        YV AQ+VG I  A +LY +A        A    A N    ++ 
Sbjct: 70  TIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSP 129

Query: 128 QG----QAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCS 183
            G     A+VVEL+L+    L I  +TD  + +P G   ++IGL+ TL HL+ I  T  S
Sbjct: 130 GGYSMLSALVVELVLSAGFLLVIHGATD--KFAPAGFAPIAIGLACTLIHLISIPVTNTS 187

Query: 184 MNPARSFGPAVVMNRFSPAH-WVFW 207
           +NPARS   A+    ++    W FW
Sbjct: 188 VNPARSTAVAIFQGGWALEQLWFFW 212


>2EVU-A nrPDB
          Length = 246

 Score = 97.1 bits (240), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 120/248 (48%), Gaps = 37/248 (14%)

Query: 8   VAFLKAVFAEFLATLIFVFFGLGSAL---------KWPSALPTI----------LQIALA 48
           V+  K   AEF+ T I VFFG GSA            P+               + I LA
Sbjct: 2   VSLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLA 61

Query: 49  FGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV 108
           FG AI     ALG +SG HINPA+T+ L    +        Y+ AQL+GA  G+ I    
Sbjct: 62  FGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQC 121

Query: 109 APLNAR--GNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIG 166
           A + A   G L   A     +  QAM+ E++ TF L + I       R +P G   + IG
Sbjct: 122 AGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDER-APKGFAGIIIG 180

Query: 167 LSV-----TLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAH-W----VFWVGPIVGAVL 216
           L+V     TLG++     +G S+NPAR+FGP +    F+    W    ++ +GPIVGAVL
Sbjct: 181 LTVAGIITTLGNI-----SGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVL 235

Query: 217 AAILYFYL 224
           AA+ Y YL
Sbjct: 236 AALTYQYL 243


>2W1P-A nrPDB
          Length = 279

 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 8/177 (4%)

Query: 42  ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAG 101
           ++     FG+ +G        VSGG++NPA+TLAL++   I   R       Q+V  +A 
Sbjct: 87  MISFGFGFGVMVGVFITYR--VSGGNLNPAVTLALVLARAIPPFRGILMAFTQIVAGMAA 144

Query: 102 AGILYGVAPLNARGNLA-VNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGS 160
           AG    + P    G +A  NAL    ++ + + +E   T  L L +      +  +   +
Sbjct: 145 AGAASAMTP----GEIAFANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRATWFA 200

Query: 161 PALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLA 217
           P   IG+++ + HL+ IY+TG  +NPARSFGPAV    F   HW++W+GPI+GA LA
Sbjct: 201 P-FVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARSFPNYHWIYWLGPILGAFLA 256


>3NE2-A nrPDB
          Length = 246

 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 115/243 (47%), Gaps = 36/243 (14%)

Query: 12  KAVFAEFLATLIFVFFGLGSAL---------KWPSALPTI----------LQIALAFGLA 52
           K   AE + T I VFFG G+A+           P+                 I +AF LA
Sbjct: 7   KRFTAEVVGTFILVFFGPGAAVITLMIANGADKPNEFNIGIGALGGLGDWFAIGMAFALA 66

Query: 53  IGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGI-LYGVAPL 111
           I  +  +LG +SG HINPA+T+AL    +        Y+ AQ +GA  G+ + L  V P 
Sbjct: 67  IAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLACVGPA 126

Query: 112 NAR-GNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSV- 169
            A  G L   A       GQA++ E I TF L L I       R  P G   L IGL+V 
Sbjct: 127 AATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDERAPP-GFAGLVIGLTVG 185

Query: 170 ----TLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHW----VFWVGPIVGAVLAAILY 221
               T+G++     TG S+NPAR+FGP +  +      W    ++ +GPIVGAV AA LY
Sbjct: 186 GIITTIGNI-----TGSSLNPARTFGPYLGDSLMGINLWQYFPIYVIGPIVGAVAAAWLY 240

Query: 222 FYL 224
            YL
Sbjct: 241 NYL 243


>1LDI-A nrPDB
          Length = 281

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 119/271 (43%), Gaps = 44/271 (16%)

Query: 16  AEFLATLIFVFFGLG--SALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAIT 73
           AEFL T + +FFG+G  +ALK   A     +I++ +GL +         VSG H+NPA+T
Sbjct: 13  AEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTAGVSGAHLNPAVT 72

Query: 74  LALLVGNQISLLRAFFYVAAQLVGAIAGAGILYG-------------------VAPLNAR 114
           +AL +       +   ++ +Q+ GA   A ++YG                   V  ++  
Sbjct: 73  IALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLA 132

Query: 115 GNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPA-LSIGLSV-TLG 172
           G  +    N +    QA  VE+++T  L   I A TD     P G  A L IGL +  +G
Sbjct: 133 GTFSTYP-NPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIAVIG 191

Query: 173 HLVGIYFTGCSMNPARSFGPAVVM------------NRFSPAHWVFWVGPIVGAVLAAIL 220
             +G   TG +MNPAR FGP V               R  P   V   GPIVGA++ A  
Sbjct: 192 ASMGP-LTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFA 250

Query: 221 YFYLL---FPNSLSLSERVAIIKGTYEPDED 248
           Y  L+    P  + + E     K T  P E 
Sbjct: 251 YRKLIGRHLPCDICVVEE----KETTTPSEQ 277


>3C02-A nrPDB
          Length = 258

 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 36/246 (14%)

Query: 9   AFLKAVFAEFLATLIFVFFGLGSALKWPSA--LPTILQIALAFGLAI--GTLAQALGPVS 64
           ++++    EFL T + +F G G+   + +        ++ L +GLA+  G L  A   +S
Sbjct: 8   SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSA--KLS 65

Query: 65  GGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNAL-- 122
           G H+N A+++ L   N+  L +   Y  AQL+GA  G   +YG+      G ++ + +  
Sbjct: 66  GAHLNLAVSIGLSSINKFDLKKIPVYFFAQLLGAFVGTSTVYGL----YHGFISNSKIPQ 121

Query: 123 -------NNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALS--IGLSVTLGH 173
                  N + +   A   ELILT  L L I    D           LS  +GL +    
Sbjct: 122 FAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFHILKLSSVVGLIIL--- 178

Query: 174 LVGIYF---TGCSMNPARSFGP------AVVMNRFSPAHWVFW---VGPIVGAVLAAILY 221
            +GI F   TG ++NP+R  G       A   + F+  ++ FW   V P VG+V+    Y
Sbjct: 179 CIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFY 238

Query: 222 FYLLFP 227
             ++ P
Sbjct: 239 DKVICP 244


>6F7H-A nrPDB
          Length = 301

 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 99/240 (41%), Gaps = 31/240 (12%)

Query: 12  KAVFAEFLATLIFVFFGLGSALKWPSALPT---ILQIALAFGLAIGTLAQALGPVSGGHI 68
           +   AEFL   + +    G+  +  ++  T      + LA  LA+       G VSG H+
Sbjct: 22  RQCLAEFLGVFVLMLLTQGAVAQAVTSGETKGNFFTMFLAGSLAVTIAIYVGGNVSGAHL 81

Query: 69  NPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAG---ILYGVAPLN-ARGNLAVNALNN 124
           NPA +LA+ +  ++  ++   Y+  QL+ A   +G   +LY  A  N   GNL V     
Sbjct: 82  NPAFSLAMCIVGRLPWVKLPIYILVQLLSAFCASGATYVLYHDALQNYTGGNLTVTGPKE 141

Query: 125 NT-----------TQGQAMVVELILTFQLALCIFASTDSRRTS-PVGSPALSIG-LSVTL 171
                        +     + +++ T  L + + A  D R    P G   + +G L + L
Sbjct: 142 TASIFATYPAPYLSLNNGFLDQVLGTGMLIVGLLAILDRRNKGVPAGLEPVVVGMLILAL 201

Query: 172 GHLVGIYFTGCSMNPARSFGPAVVM-------NRFSPAH---WVFWVGPIVGAVLAAILY 221
           G  +G    G  +NPAR  GP +           FS  +   WV  V P+VGA +    Y
Sbjct: 202 GLSMGAN-CGIPLNPARDLGPRLFTYVAGWGPEVFSAGNGWWWVPVVAPLVGATVGTATY 260


>1LVL-A nrPDB
          Length = 458

 Score = 30.4 bits (67), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 146 IFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGC 182
           I  + DS  T+PV      +G+++ LGH V  Y  GC
Sbjct: 206 ILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGC 242


>6OAZ-A nrPDB
          Length = 448

 Score = 29.3 bits (64), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 159 GSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAV 194
           GSP  SIG+   +GH V IY  G +  P  + G A+
Sbjct: 188 GSPGRSIGIQKPVGH-VDIYPNGGTFQPGCNIGEAI 222


>4KJS-A nrPDB
          Length = 351

 Score = 28.9 bits (63), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 12/77 (15%)

Query: 29 LGSALKWPSAL------PTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQI 82
          +GS + WPSA+       TI+ +A   G A  +L+   GP  GG +N         GN +
Sbjct: 18 IGSLMHWPSAVLFAVYCVTIIALASYMGRATESLSIIAGPRIGGLLNATF------GNAV 71

Query: 83 SLLRAFFYVAAQLVGAI 99
           L+ + F +   L G +
Sbjct: 72 ELIISMFALKEGLTGIV 88


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

3D9S-A nrPDB                                                          333   3e-92
4OJ2-X nrPDB                                                          320   4e-88
1YMG-A nrPDB                                                          299   8e-82
3IYZ-A nrPDB                                                          299   1e-81
2ZZ9-A nrPDB                                                          298   2e-81
1IH5-A nrPDB                                                          297   3e-81
1J4N-A nrPDB                                                          297   4e-81
4NEF-A nrPDB                                                          287   3e-78
3M9I-A nrPDB                                                          257   3e-69
3GD8-A nrPDB                                                          253   4e-68
3CLL-A nrPDB                                                          211   3e-55
1LDI-A nrPDB                                                          192   2e-49
2EVU-A nrPDB                                                          188   2e-48
5I32-A nrPDB                                                          181   3e-46
3NE2-A nrPDB                                                          179   9e-46
3LLQ-A nrPDB                                                          174   3e-44
3C02-A nrPDB                                                          174   3e-44
2O9F-A nrPDB                                                          171   3e-43
2W1P-A nrPDB                                                          167   4e-42
6F7H-A nrPDB                                                          166   7e-42

Sequences not found previously or not previously below threshold:

3DZU-A nrPDB                                                           30   1.1  
5AGS-A nrPDB                                                           28   5.4  
6BH8-A nrPDB                                                           27   6.6  


CONVERGED!
>3D9S-A nrPDB
          Length = 266

 Score =  333 bits (855), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 264/264 (100%), Positives = 264/264 (100%)

Query: 2   KKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALG 61
           KKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALG
Sbjct: 3   KKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALG 62

Query: 62  PVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNA 121
           PVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNA
Sbjct: 63  PVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNA 122

Query: 122 LNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTG 181
           LNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTG
Sbjct: 123 LNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTG 182

Query: 182 CSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKG 241
           CSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKG
Sbjct: 183 CSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKG 242

Query: 242 TYEPDEDWEEQREERKKTMELTTR 265
           TYEPDEDWEEQREERKKTMELTTR
Sbjct: 243 TYEPDEDWEEQREERKKTMELTTR 266


>4OJ2-X nrPDB
          Length = 274

 Score =  320 bits (820), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 171/261 (65%), Positives = 213/261 (81%), Gaps = 2/261 (0%)

Query: 4   EVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPV 63
           E+ S+AF +AVFAEFLATL+FVFFGLGSAL WP ALP++LQIA+AFGL IGTL QALG +
Sbjct: 6   ELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGHI 65

Query: 64  SGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALN 123
           SG HINPA+T+A LVG  +S+LRA FYVAAQL+GA+AGA +L+ + P + RG+LAVNAL+
Sbjct: 66  SGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNALS 125

Query: 124 NNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCS 183
           N+TT GQA+ VEL LT QL LCIFASTD RR    G+PALSIG SV LGHL+GI++TGCS
Sbjct: 126 NSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGCS 185

Query: 184 MNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKGTY 243
           MNPARS  PAVV  +F   HWVFW+GP+VGA+L ++LY Y+LFP + SLSER+A++KG  
Sbjct: 186 MNPARSLAPAVVTGKF-DDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKG-L 243

Query: 244 EPDEDWEEQREERKKTMELTT 264
           EPD DWEE+   R++ +EL +
Sbjct: 244 EPDTDWEEREVRRRQAVELHS 264


>1YMG-A nrPDB
          Length = 263

 Score =  299 bits (766), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 139/262 (53%), Positives = 190/262 (72%), Gaps = 3/262 (1%)

Query: 4   EVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPV 63
           E+ S +F +A+ AEF A+L +VFFGLG++L+W      +LQ+ALAFGLA+ TL QA+G +
Sbjct: 3   ELRSASFWRAICAEFFASLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHI 62

Query: 64  SGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALN 123
           SG H+NPA+T A LVG+Q+SLLRA  Y+ AQL+GA+AGA +LY V P   RGNLA+N L+
Sbjct: 63  SGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLH 122

Query: 124 NNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCS 183
              + GQA +VE+ LT Q  LCIFA+ D RR   +GS AL++G S+TLGHL G+Y+TG  
Sbjct: 123 PGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAG 182

Query: 184 MNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKGTY 243
           MNPARSF PA++   F+  HWV+WVGP++GA L ++LY +LLFP   S+SER++I+KG+ 
Sbjct: 183 MNPARSFAPAILTRNFT-NHWVYWVGPVIGAGLGSLLYDFLLFPRLKSVSERLSILKGS- 240

Query: 244 EPDEDWEEQREERKKTMELTTR 265
            P E    Q E   + +EL T+
Sbjct: 241 RPSESN-GQPEVTGEPVELKTQ 261


>3IYZ-A nrPDB
          Length = 340

 Score =  299 bits (765), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 127/266 (47%), Positives = 167/266 (62%), Gaps = 12/266 (4%)

Query: 3   KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSA----LPTILQIALAFGLAIGTLAQ 58
           K V + AF KAV AEFLA LIFV   +GS + W  +       ++ I+L FGL+I T+ Q
Sbjct: 44  KGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQ 103

Query: 59  ALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLA 118
             G +SGGHINPA+T+A++   +IS+ ++ FY+ AQ +GAI GAGILY V P +  G L 
Sbjct: 104 CFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLG 163

Query: 119 VNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIY 178
           V  ++ N T G  ++VELI+TFQL   IFAS D +RT   GS AL+IG SV +GHL  I 
Sbjct: 164 VTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAIN 223

Query: 179 FTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN-------SLS 231
           +TG SMNPARSFGPAV+M  +   HW++WVGPI+GAVLA  LY Y+  P+         +
Sbjct: 224 YTGASMNPARSFGPAVIMGNWE-NHWIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKEA 282

Query: 232 LSERVAIIKGTYEPDEDWEEQREERK 257
            S+     KG+Y   ED   Q E   
Sbjct: 283 FSKAAQQTKGSYMEVEDNRSQVETED 308


>2ZZ9-A nrPDB
          Length = 301

 Score =  298 bits (762), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 127/266 (47%), Positives = 167/266 (62%), Gaps = 12/266 (4%)

Query: 3   KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSA----LPTILQIALAFGLAIGTLAQ 58
           K V + AF KAV AEFLA LIFV   +GS + W  +       ++ I+L FGL+I T+ Q
Sbjct: 5   KGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQ 64

Query: 59  ALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLA 118
             G +SGGHINPA+T+A++   +IS+ ++ FY+ AQ +GAI GAGILY V P +  G L 
Sbjct: 65  CFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLG 124

Query: 119 VNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIY 178
           V  ++ N T G  ++VELI+TFQL   IFAS D +RT   GS AL+IG SV +GHL  I 
Sbjct: 125 VTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTGSVALAIGFSVAIGHLFAIN 184

Query: 179 FTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN-------SLS 231
           +TG SMNPARSFGPAV+M  +   HW++WVGPI+GAVLA  LY Y+  P+         +
Sbjct: 185 YTGASMNPARSFGPAVIMGNWE-NHWIYWVGPIIGAVLAGALYEYVFCPDVELKRRLKEA 243

Query: 232 LSERVAIIKGTYEPDEDWEEQREERK 257
            S+     KG+Y   ED   Q E   
Sbjct: 244 FSKAAQQTKGSYMEVEDNRSQVETED 269


>1IH5-A nrPDB
          Length = 269

 Score =  297 bits (760), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 122/268 (45%), Positives = 165/268 (61%), Gaps = 12/268 (4%)

Query: 1   MKKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKW-------PSALPTILQIALAFGLAI 53
           M  E     F +AV AEFLAT +FVF  +GSAL +        +A+   ++++LAFGL+I
Sbjct: 1   MASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSI 60

Query: 54  GTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNA 113
            TLAQ++G +SG H+NPA+TL LL+  QIS+ RA  Y+ AQ VGAI    IL G+     
Sbjct: 61  ATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLT 120

Query: 114 RGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGH 173
             +L  N L +    GQ + +E+I T QL LC+ A+TD RR    GS  L+IGLSV LGH
Sbjct: 121 GNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGH 180

Query: 174 LVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLS 233
           L+ I +TGC +NPARSFG AV+ + FS  HW+FWVGP +G  LA ++Y ++L P S  L+
Sbjct: 181 LLAIDYTGCGINPARSFGSAVITHNFS-NHWIFWVGPFIGGALAVLIYDFILAPRSSDLT 239

Query: 234 ERVAIIK----GTYEPDEDWEEQREERK 257
           +RV +        Y+ D D    R E K
Sbjct: 240 DRVKVWTSGQVEEYDLDADDINSRVEMK 267


>1J4N-A nrPDB
          Length = 271

 Score =  297 bits (760), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 120/270 (44%), Positives = 165/270 (61%), Gaps = 14/270 (5%)

Query: 1   MKKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWP---------SALPTILQIALAFGL 51
           M  E     F +AV AEFLA ++F+F  +GSAL +           A+   ++++LAFGL
Sbjct: 1   MASEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGL 60

Query: 52  AIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPL 111
           +I TLAQ++G +SG H+NPA+TL LL+  QIS+LRA  Y+ AQ VGAI    IL G+   
Sbjct: 61  SIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSS 120

Query: 112 NARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTL 171
               +L +NAL      GQ + +E+I T QL LC+ A+TD RR    GS  L+IG SV L
Sbjct: 121 LPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSGPLAIGFSVAL 180

Query: 172 GHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLS 231
           GHL+ I +TGC +NPARSFG +V+ + F   HW+FWVGP +GA LA ++Y ++L P S  
Sbjct: 181 GHLLAIDYTGCGINPARSFGSSVITHNFQ-DHWIFWVGPFIGAALAVLIYDFILAPRSSD 239

Query: 232 LSERVAIIK----GTYEPDEDWEEQREERK 257
           L++RV +        Y+ D D    R E K
Sbjct: 240 LTDRVKVWTSGQVEEYDLDADDINSRVEMK 269


>4NEF-A nrPDB
          Length = 242

 Score =  287 bits (735), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 161/239 (67%), Positives = 198/239 (82%), Gaps = 1/239 (0%)

Query: 3   KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGP 62
            E+ S+AF +AVFAEFLATL+FVFFGLGSAL WP ALP++LQIA+AFGL IGTL QALG 
Sbjct: 2   SELRSIAFSRAVFAEFLATLLFVFFGLGSALNWPQALPSVLQIAMAFGLGIGTLVQALGH 61

Query: 63  VSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNAL 122
           +SG HINPA+T+A LVG  +S+LRA FYVAAQL+GA+AGA +L+ + P + RG+LAVNAL
Sbjct: 62  ISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDLAVNAL 121

Query: 123 NNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGC 182
           +N+TT GQA+ VEL LT QL LCIFASTD RR    G+PALSIG SV LGHL+GI++TGC
Sbjct: 122 SNSTTAGQAVTVELFLTLQLVLCIFASTDERRGENPGTPALSIGFSVALGHLLGIHYTGC 181

Query: 183 SMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSLSERVAIIKG 241
           SMNPARS  PAVV  +F   HWVFW+GP+VGA+L ++LY Y+LFP + SLSER+A++KG
Sbjct: 182 SMNPARSLAPAVVTGKF-DDHWVFWIGPLVGAILGSLLYNYVLFPPAKSLSERLAVLKG 239


>3M9I-A nrPDB
          Length = 220

 Score =  257 bits (657), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 126/221 (57%), Positives = 166/221 (75%), Gaps = 1/221 (0%)

Query: 8   VAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGH 67
            +F +A+FAEF ATL +VFFGLG++L+W      +LQ+ALAFGLA+ TL QA+G +SG H
Sbjct: 1   ASFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAH 60

Query: 68  INPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTT 127
           +NPA+T A LVG+Q+SLLRA  YV AQL+GA+AGA +LY V P   RGNLA+N L+   +
Sbjct: 61  VNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVS 120

Query: 128 QGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCSMNPA 187
            GQA +VE+ LT Q  LCIFA+ D RR   +GS AL++G S+TLGHL G+Y+TG  MNPA
Sbjct: 121 VGQATIVEIFLTLQFVLCIFATYDERRNGRLGSVALAVGFSLTLGHLFGMYYTGAGMNPA 180

Query: 188 RSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPN 228
           RSF PA++   F+  HWV+WVGP++GA L ++LY +LLFP 
Sbjct: 181 RSFAPAILTRNFT-NHWVYWVGPVIGAGLGSLLYDFLLFPR 220


>3GD8-A nrPDB
          Length = 223

 Score =  253 bits (647), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 120/224 (53%), Positives = 153/224 (68%), Gaps = 5/224 (2%)

Query: 8   VAFLKAVFAEFLATLIFVFFGLGSALKWPSA----LPTILQIALAFGLAIGTLAQALGPV 63
            AF KAV AEFLA LIFV   LGS + W          ++ I+L FGL+I T+ Q  G +
Sbjct: 1   QAFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHI 60

Query: 64  SGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALN 123
           SGGHINPA+T+A++   +IS+ ++ FY+AAQ +GAI GAGILY V P +  G L V  ++
Sbjct: 61  SGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVH 120

Query: 124 NNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCS 183
            N T G  ++VELI+TFQL   IFAS DS+RT   GS AL+IG SV +GHL  I +TG S
Sbjct: 121 GNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIALAIGFSVAIGHLFAINYTGAS 180

Query: 184 MNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFP 227
           MNPARSFGPAV+M  +   HW++WVGPI+GAVLA  LY Y+  P
Sbjct: 181 MNPARSFGPAVIMGNWE-NHWIYWVGPIIGAVLAGGLYEYVFCP 223


>3CLL-A nrPDB
          Length = 300

 Score =  211 bits (537), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 86/235 (36%), Positives = 128/235 (54%), Gaps = 14/235 (5%)

Query: 4   EVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSA-----LPTILQIALAFGLAIGTLAQ 58
           E+   +F +A  AEF+ATL+F++  + + +             +L IA AFG  I  L  
Sbjct: 50  ELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVY 109

Query: 59  ALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGIL--YGVAPLNARGN 116
               +SGGHINPA+T  L +  ++ LLRA  Y+ AQ +GAI G G++  +   P N  G 
Sbjct: 110 CTAGISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGG 169

Query: 117 LAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSP----VGSPALSIGLSVTLG 172
              N++     +G A+  E+I TF L   +F++TD +R++          L IG +V + 
Sbjct: 170 -GANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMV 228

Query: 173 HLVGIYFTGCSMNPARSFGPAVVM--NRFSPAHWVFWVGPIVGAVLAAILYFYLL 225
           HL  I  TG  +NPARSFG AV+   N+     W+FWVGP +GA +AA  + Y+L
Sbjct: 229 HLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVL 283


>1LDI-A nrPDB
          Length = 281

 Score =  192 bits (487), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 80/273 (29%), Positives = 115/273 (42%), Gaps = 42/273 (15%)

Query: 13  AVFAEFLATLIFVFFGLG--SALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINP 70
              AEFL T + +FFG+G  +ALK   A     +I++ +GL +         VSG H+NP
Sbjct: 10  QCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIWGLGVAMAIYLTAGVSGAHLNP 69

Query: 71  AITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYG-------------------VAPL 111
           A+T+AL +       +   ++ +Q+ GA   A ++YG                   V  +
Sbjct: 70  AVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESV 129

Query: 112 NARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGS-PALSIGLSVT 170
           +  G  +    N +    QA  VE+++T  L   I A TD     P G    L IGL + 
Sbjct: 130 DLAGTFSTY-PNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGPLAPLLIGLLIA 188

Query: 171 LGHLVGIYFTGCSMNPARSFGPAVVM------------NRFSPAHWVFWVGPIVGAVLAA 218
           +        TG +MNPAR FGP V               R  P   V   GPIVGA++ A
Sbjct: 189 VIGASMGPLTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGA 248

Query: 219 ILYFYLL---FPNSLSLSERVAIIKGTYEPDED 248
             Y  L+    P  + + E     K T  P E 
Sbjct: 249 FAYRKLIGRHLPCDICVVEE----KETTTPSEQ 277


>2EVU-A nrPDB
          Length = 246

 Score =  188 bits (477), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 85/243 (34%), Positives = 114/243 (46%), Gaps = 27/243 (11%)

Query: 8   VAFLKAVFAEFLATLIFVFFGLGSAL---------KWPSALP----------TILQIALA 48
           V+  K   AEF+ T I VFFG GSA            P+               + I LA
Sbjct: 2   VSLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLA 61

Query: 49  FGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV 108
           FG AI     ALG +SG HINPA+T+ L    +        Y+ AQL+GA  G+ I    
Sbjct: 62  FGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQC 121

Query: 109 APLNAR--GNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIG 166
           A + A   G L   A     +  QAM+ E++ TF L + I       R +P G   + IG
Sbjct: 122 AGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDER-APKGFAGIIIG 180

Query: 167 LSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRF-----SPAHWVFWVGPIVGAVLAAILY 221
           L+V          +G S+NPAR+FGP +    F        + ++ +GPIVGAVLAA+ Y
Sbjct: 181 LTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTY 240

Query: 222 FYL 224
            YL
Sbjct: 241 QYL 243



 Score = 48.1 bits (113), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 8/108 (7%)

Query: 8   VAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGH 67
           +++ +A+ AE + T + +   +G A+    A      I +  GL +  +   LG +SG  
Sbjct: 141 ISYWQAMLAEVVGTFLLMITIMGIAVD-ERAPKGFAGIII--GLTVAGIITTLGNISGSS 197

Query: 68  INPAITLA-----LLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAP 110
           +NPA T       ++            YV   +VGA+  A     +  
Sbjct: 198 LNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245


>5I32-A nrPDB
          Length = 275

 Score =  181 bits (459), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 90/240 (37%), Positives = 134/240 (55%), Gaps = 16/240 (6%)

Query: 3   KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSAL-------PTILQIALAFGLAIGT 55
            +  S+A L+A  AEF++TL+FVF G+GSA+ +           P ++ IA+  G A+  
Sbjct: 35  DDSFSLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFV 94

Query: 56  LAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARG 115
                  +SGGH+NPA+T  L VG QI+++   FY  AQL+G+ A   +L  V      G
Sbjct: 95  AVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVT-----G 149

Query: 116 NLAVNALNNNTTQG--QAMVVELILTFQLALCIFASTDSRRTSPVGS-PALSIGLSVTLG 172
            LAV   +     G  + +V+E+I+TF L   ++A+    +   +G+   L+IGL V   
Sbjct: 150 GLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGAN 209

Query: 173 HLVGIYFTGCSMNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSLSL 232
            L    F+G SMNPARSFGPAV    FS  HWV+WVGP++G  LA ++Y  +   +S  +
Sbjct: 210 ILAAGPFSGGSMNPARSFGPAVAAGDFS-GHWVYWVGPLIGGGLAGLIYGNVFMGSSEHV 268


>3NE2-A nrPDB
          Length = 246

 Score =  179 bits (455), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 82/243 (33%), Positives = 110/243 (45%), Gaps = 26/243 (10%)

Query: 7   SVAFLKAVFAEFLATLIFVFFGLGSAL---------KWPSALP----------TILQIAL 47
           ++   K   AE + T I VFFG G+A+           P+                 I +
Sbjct: 2   TMTLAKRFTAEVVGTFILVFFGPGAAVITLMIANGADKPNEFNIGIGALGGLGDWFAIGM 61

Query: 48  AFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYG 107
           AF LAI  +  +LG +SG HINPA+T+AL    +        Y+ AQ +GA  G+ +   
Sbjct: 62  AFALAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLA 121

Query: 108 VAPLNAR--GNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSI 165
                A   G L   A       GQA++ E I TF L L I       R +P G   L I
Sbjct: 122 CVGPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDER-APPGFAGLVI 180

Query: 166 GLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPAHW----VFWVGPIVGAVLAAILY 221
           GL+V          TG S+NPAR+FGP +  +      W    ++ +GPIVGAV AA LY
Sbjct: 181 GLTVGGIITTIGNITGSSLNPARTFGPYLGDSLMGINLWQYFPIYVIGPIVGAVAAAWLY 240

Query: 222 FYL 224
            YL
Sbjct: 241 NYL 243



 Score = 44.6 bits (104), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 7/106 (6%)

Query: 8   VAFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGH 67
           + + +A+  E + T + +   +G A+    A P      L  GL +G +   +G ++G  
Sbjct: 142 IGYGQAILTEAIGTFLLMLVIMGVAVD-ERAPPGFA--GLVIGLTVGGIITTIGNITGSS 198

Query: 68  INPAITLALLVGNQISLLRA----FFYVAAQLVGAIAGAGILYGVA 109
           +NPA T    +G+ +  +        YV   +VGA+A A +   +A
Sbjct: 199 LNPARTFGPYLGDSLMGINLWQYFPIYVIGPIVGAVAAAWLYNYLA 244


>3LLQ-A nrPDB
          Length = 256

 Score =  174 bits (442), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 83/229 (36%), Positives = 120/229 (52%), Gaps = 13/229 (5%)

Query: 5   VCSVAFLKAVFAEFLATLIFVFFGLGSAL---KWPSALPTILQIALAFGLAIGTLAQALG 61
             S    + + AEF  T   VF G GSA+    +P        +ALAFGL + T+A A+G
Sbjct: 24  FQSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVG 83

Query: 62  PVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNAR---GNLA 118
            +SGGH NPA+++ L V  +        YV AQ+ GAI  A  LY +A   A    G  A
Sbjct: 84  GISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFA 143

Query: 119 VNALNNNTTQG----QAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHL 174
            N    ++  G     A+++E+ILT    + I  ST  R   P G   ++IGL++TL HL
Sbjct: 144 SNGYGEHSPGGYSLVSALLIEIILTAFFLIVILGSTHGR--VPAGFAPIAIGLALTLIHL 201

Query: 175 VGIYFTGCSMNPARSFGPAVVMNRFSPAH-WVFWVGPIVGAVLAAILYF 222
           + I  T  S+NPARS G A+ +  ++    W+FW+ PIVG    A+++ 
Sbjct: 202 ISIPVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWK 250


>3C02-A nrPDB
          Length = 258

 Score =  174 bits (442), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 26/245 (10%)

Query: 5   VCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSAL--PTILQIALAFGLAIGTLAQALGP 62
           +   ++++    EFL T + +F G G+   + +        ++ L +GLA+         
Sbjct: 4   LFYKSYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAK 63

Query: 63  VSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNAL 122
           +SG H+N A+++ L   N+  L +   Y  AQL+GA  G   +YG+      G ++ + +
Sbjct: 64  LSGAHLNLAVSIGLSSINKFDLKKIPVYFFAQLLGAFVGTSTVYGL----YHGFISNSKI 119

Query: 123 ---------NNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPAL--SIGLSVTL 171
                    N + +   A   ELILT  L L I    D           L   +GL +  
Sbjct: 120 PQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENICGKFHILKLSSVVGLIILC 179

Query: 172 GHLVGIYFTGCSMNPARSFGP------AVVMNRFSPAHWVFW---VGPIVGAVLAAILYF 222
             +     TG ++NP+R  G       A   + F+  ++ FW   V P VG+V+    Y 
Sbjct: 180 IGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYD 239

Query: 223 YLLFP 227
            ++ P
Sbjct: 240 KVICP 244


>2O9F-A nrPDB
          Length = 234

 Score =  171 bits (434), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 84/231 (36%), Positives = 119/231 (51%), Gaps = 15/231 (6%)

Query: 12  KAVFAEFLATLIFVFFGLGSAL---KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHI 68
           + + AE   T   VF G GSA+    +P        +ALAFGL + T+A A+G +SGGH 
Sbjct: 6   RKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHF 65

Query: 69  NPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLN-----ARGNLAVNALN 123
           NPA+T+ L  G +        YV AQ+VG I  A +LY +A        A    A N   
Sbjct: 66  NPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYG 125

Query: 124 NNTTQG----QAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYF 179
            ++  G     A+VVEL+L+    L I  +TD  + +P G   ++IGL+ TL HL+ I  
Sbjct: 126 EHSPGGYSMLSALVVELVLSAGFLLVIHGATD--KFAPAGFAPIAIGLACTLIHLISIPV 183

Query: 180 TGCSMNPARSFGPAVVMNRFSPAH-WVFWVGPIVGAVLAAILYFYLLFPNS 229
           T  S+NPARS   A+    ++    W FWV PIVG ++  ++Y  LL    
Sbjct: 184 TNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRD 234


>2W1P-A nrPDB
          Length = 279

 Score =  167 bits (424), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 13/219 (5%)

Query: 13  AVFAEFLATLIFVF--FGLGSALKWPSALPT-------ILQIALAFGLAIGTLAQALGPV 63
           A+  EF+ T +F++  F +          P        ++ I+  FG  +         V
Sbjct: 47  AMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRV 106

Query: 64  SGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALN 123
           SGG++NPA+TLAL++   I   R       Q+V  +A AG    + P         NAL 
Sbjct: 107 SGGNLNPAVTLALVLARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIA---FANALG 163

Query: 124 NNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGSPALSIGLSVTLGHLVGIYFTGCS 183
              ++ + + +E   T  L L +      +  +        IG+++ + HL+ IY+TG  
Sbjct: 164 GGASRTRGLFLEAFGTAILCLTVLMLAVEKHRATW-FAPFVIGIALLIAHLICIYYTGAG 222

Query: 184 MNPARSFGPAVVMNRFSPAHWVFWVGPIVGAVLAAILYF 222
           +NPARSFGPAV    F   HW++W+GPI+GA LA  ++ 
Sbjct: 223 LNPARSFGPAVAARSFPNYHWIYWLGPILGAFLAYSIWQ 261


>6F7H-A nrPDB
          Length = 301

 Score =  166 bits (421), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 60/245 (24%), Positives = 99/245 (40%), Gaps = 31/245 (12%)

Query: 12  KAVFAEFLATLIFVFFGLGSALKWPSALPT---ILQIALAFGLAIGTLAQALGPVSGGHI 68
           +   AEFL   + +    G+  +  ++  T      + LA  LA+       G VSG H+
Sbjct: 22  RQCLAEFLGVFVLMLLTQGAVAQAVTSGETKGNFFTMFLAGSLAVTIAIYVGGNVSGAHL 81

Query: 69  NPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAG---ILYGVAPLNARGN--------- 116
           NPA +LA+ +  ++  ++   Y+  QL+ A   +G   +LY  A  N  G          
Sbjct: 82  NPAFSLAMCIVGRLPWVKLPIYILVQLLSAFCASGATYVLYHDALQNYTGGNLTVTGPKE 141

Query: 117 ---LAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS-PVGSPALSIG-LSVTL 171
              +         +     + +++ T  L + + A  D R    P G   + +G L + L
Sbjct: 142 TASIFATYPAPYLSLNNGFLDQVLGTGMLIVGLLAILDRRNKGVPAGLEPVVVGMLILAL 201

Query: 172 GHLVGIYFTGCSMNPARSFGPAVVM-------NRFSPAH---WVFWVGPIVGAVLAAILY 221
           G  +G    G  +NPAR  GP +           FS  +   WV  V P+VGA +    Y
Sbjct: 202 GLSMGAN-CGIPLNPARDLGPRLFTYVAGWGPEVFSAGNGWWWVPVVAPLVGATVGTATY 260

Query: 222 FYLLF 226
             L+ 
Sbjct: 261 QLLVA 265


>3DZU-A nrPDB
          Length = 467

 Score = 30.0 bits (66), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 3/94 (3%)

Query: 99  IAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVEL---ILTFQLALCIFASTDSRRT 155
           +    +   +     RG++A  +L+ +   G     +L   I T    +       S  +
Sbjct: 15  MFSTQVNSSLTSPTGRGSMAAPSLHPSLGPGIGSPGQLHSPISTLSSPINGMGPPFSVIS 74

Query: 156 SPVGSPALSIGLSVTLGHLVGIYFTGCSMNPARS 189
           SP+G  ++S+  + TLG   G       MNP  S
Sbjct: 75  SPMGPHSMSVPTTPTLGFSTGSPQLSSPMNPVSS 108


>5AGS-A nrPDB
          Length = 232

 Score = 27.7 bits (60), Expect = 5.4,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 18  FLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVS 64
           F+A  +   +G G+ +  P         A AFGL I  +  A G +S
Sbjct: 145 FIADYVLAGYGTGAIMAVPGHDQRDWDFARAFGLPIVEVI-AGGNIS 190


>6BH8-A nrPDB
          Length = 483

 Score = 27.3 bits (59), Expect = 6.6,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 24/120 (20%)

Query: 7   SVAFLKAVFAEFLATLIFVFFGL-------GSALKWPSALPTI-LQIALAFGLAIGTLAQ 58
           + +F   +++E   TLI +F G+       G    +    P   +  +L F L + TL  
Sbjct: 76  TFSFWSGLYSETEGTLILLFGGIPYLWRLSGRFCGYAGFGPEYEITQSLVF-LLLATLFS 134

Query: 59  ALGPVSGGHINPAI----------TLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV 108
           AL  +     N  +          TL   + + I       +V  Q +     + +LY +
Sbjct: 135 ALAGLPWSLYNTFVIEEKHGFNQQTLGFFMKDAIKK-----FVVTQCILLPVSSLLLYII 189


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.316    0.138    0.368 

Lambda     K      H
   0.267   0.0423    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,911,426
Number of Sequences: 36641
Number of extensions: 323786
Number of successful extensions: 1376
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 1179
Number of HSP's gapped (non-prelim): 83
length of query: 265
length of database: 10,336,785
effective HSP length: 95
effective length of query: 170
effective length of database: 6,855,890
effective search space: 1165501300
effective search space used: 1165501300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.1 bits)
S2: 58 (26.9 bits)