BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P54999 (86 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1N9R-A nrPDB 179 3e-46 3JB9-I nrPDB 92 5e-20 5Z58-f nrPDB 87 1e-18 6QDV-f nrPDB 87 2e-18 6QX9-66 nrPDB 57 2e-09 3SWN-B nrPDB 54 2e-08 1JBM-A nrPDB 46 3e-06 1TH7-A nrPDB 43 3e-05 4XQ3-A nrPDB 42 4e-05 1LJO-A nrPDB 40 2e-04 4N0A-C nrPDB 37 0.002 5VSU-B nrPDB 37 0.002 4C8Q-B nrPDB 37 0.003 6QW6-64 nrPDB 36 0.003 6BK8-g nrPDB 34 0.013 4EMH-A nrPDB 34 0.013 3JB9-F nrPDB 33 0.026 6QW6-4e nrPDB 31 0.12 6ASO-C nrPDB 30 0.24 6QX9-62 nrPDB 29 0.40 6QDV-e nrPDB 29 0.42 3SWN-A nrPDB 28 1.2 4EMK-A nrPDB 28 1.3 4WZJ-C nrPDB 27 1.7 5XJU-A nrPDB 27 2.9 3CDD-A nrPDB 26 3.6 6O9M-2 nrPDB 26 3.8 3KZW-A nrPDB 26 4.4 1ZYK-A nrPDB 25 7.3 >1N9R-A nrPDB Length = 93 Score = 179 bits (453), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 86/86 (100%), Positives = 86/86 (100%) Query: 1 MSESSDISAMQPVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFV 60 MSESSDISAMQPVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFV Sbjct: 8 MSESSDISAMQPVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFV 67 Query: 61 AGVSHGTLGEIFIRCNNVLYIRELPN 86 AGVSHGTLGEIFIRCNNVLYIRELPN Sbjct: 68 AGVSHGTLGEIFIRCNNVLYIRELPN 93 >3JB9-I nrPDB Length = 78 Score = 92.0 bits (227), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 45/72 (62%), Positives = 53/72 (73%), Gaps = 1/72 (1%) Query: 12 PVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEI 71 PVNPKPFL+GL+ V V+LK+ EY+GTL S D+Y NLQL AEE V GV G LGEI Sbjct: 5 PVNPKPFLQGLIGKPVLVRLKWGQ-EYKGTLQSVDSYMNLQLLNAEELVDGVKTGDLGEI 63 Query: 72 FIRCNNVLYIRE 83 IRCNNVL++ E Sbjct: 64 LIRCNNVLWVGE 75 >5Z58-f nrPDB Length = 86 Score = 87.4 bits (215), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 42/71 (59%), Positives = 49/71 (69%), Gaps = 1/71 (1%) Query: 12 PVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEI 71 P+NPKPFL GL V VKLK+ EY+G LVS D Y N+QL EE++ G G LGE+ Sbjct: 4 PLNPKPFLNGLTGKPVMVKLKW-GMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEV 62 Query: 72 FIRCNNVLYIR 82 IRCNNVLYIR Sbjct: 63 LIRCNNVLYIR 73 >6QDV-f nrPDB Length = 72 Score = 87.0 bits (214), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 42/71 (59%), Positives = 49/71 (69%), Gaps = 1/71 (1%) Query: 12 PVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEI 71 P+NPKPFL GL V VKLK+ EY+G LVS D Y N+QL EE++ G G LGE+ Sbjct: 1 PLNPKPFLNGLTGKPVMVKLKW-GMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEV 59 Query: 72 FIRCNNVLYIR 82 IRCNNVLYIR Sbjct: 60 LIRCNNVLYIR 70 >6QX9-66 nrPDB Length = 80 Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Query: 9 AMQPVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTL 68 +++ P FLK ++ V VKL + +YRG L D Y N+ L + EE+V G Sbjct: 2 SLRKQTPSDFLKQIIGRPVVVKLN-SGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY 60 Query: 69 GEIFIRCNNVLYI 81 G+ FIR NNVLYI Sbjct: 61 GDAFIRGNNVLYI 73 >3SWN-B nrPDB Length = 77 Score = 53.5 bits (127), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Query: 14 NPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFI 73 +P FL ++ +V ++L + +Y+G L D Y NL L EE+V G G+ FI Sbjct: 6 SPNEFLNKVIGKKVLIRLS-SGVDYKGILSCLDGYMNLALERTEEYVNGKKTNVYGDAFI 64 Query: 74 RCNNVLYIRELPN 86 R NNVLY+ L + Sbjct: 65 RGNNVLYVSALDD 77 >1JBM-A nrPDB Length = 86 Score = 46.2 bits (108), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 5/79 (6%) Query: 6 DISAMQPVNPKPFLKGL---VNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAG 62 D+S+ Q VN + L L +N V +KLK E+RG L S D + NL LN+AEE G Sbjct: 3 DVSS-QRVNVQRPLDALGNSLNSPVIIKLK-GDREFRGVLKSFDLHMNLVLNDAEELEDG 60 Query: 63 VSHGTLGEIFIRCNNVLYI 81 LG + IR +N++YI Sbjct: 61 EVTRRLGTVLIRGDNIVYI 79 >1TH7-A nrPDB Length = 81 Score = 42.7 bits (99), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Query: 23 VNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCNNVLYIR 82 +N+ V VKLK N E RG L S D + NL L+++EE + S LG I IR +NV+ I Sbjct: 18 LNNLVLVKLKGNK-EVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDNVILIS 76 Query: 83 EL 84 L Sbjct: 77 PL 78 >4XQ3-A nrPDB Length = 91 Score = 42.4 bits (98), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 3/70 (4%) Query: 14 NPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSH--GTLGEI 71 NP L+ +N V VKLK + +EY G L TD NL L + E G S G + Sbjct: 11 NPLKSLRTAINRIVLVKLK-DGSEYIGKLEQTDGTMNLVLRDCTEIREGTSEPVAKYGRV 69 Query: 72 FIRCNNVLYI 81 IR +N+L+I Sbjct: 70 LIRGSNILFI 79 >1LJO-A nrPDB Length = 77 Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 34/68 (50%) Query: 15 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIR 74 P +K +V + V++K + G L D+Y NL L A E +LGEI +R Sbjct: 6 PNQMVKSMVGKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAMECKGEEKVRSLGEIVLR 65 Query: 75 CNNVLYIR 82 NNV+ I+ Sbjct: 66 GNNVVLIQ 73 >4N0A-C nrPDB Length = 109 Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 7/68 (10%) Query: 18 FLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNE---AEEFVAGVSH-GTLGEIFI 73 F K LV+ V V+LK N E +GTL S D + NL+L+ +E H G++ IFI Sbjct: 20 FFKTLVDQEVVVELK-NDIEIKGTLQSVDQFLNLKLDNISCTDE--KKYPHLGSVRNIFI 76 Query: 74 RCNNVLYI 81 R + V Y+ Sbjct: 77 RGSTVRYV 84 >5VSU-B nrPDB Length = 98 Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 7/69 (10%) Query: 17 PFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNE---AEEFVAGVSH-GTLGEIF 72 F K LV+ V V+LK N E +GTL S D + NL+L+ +E H G++ IF Sbjct: 8 SFFKTLVDQEVVVELK-NDIEIKGTLQSVDQFLNLKLDNISCTDE--KKYPHLGSVRNIF 64 Query: 73 IRCNNVLYI 81 IR + V Y+ Sbjct: 65 IRGSTVRYV 73 >4C8Q-B nrPDB Length = 105 Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 7/69 (10%) Query: 17 PFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNE---AEEFVAGVSH-GTLGEIF 72 F K LV+ V V+LK N E +GTL S D + NL+L+ +E H G++ IF Sbjct: 15 SFFKTLVDQEVVVELK-NDIEIKGTLQSVDQFLNLKLDNISCTDE--KKYPHLGSVRNIF 71 Query: 73 IRCNNVLYI 81 IR + V Y+ Sbjct: 72 IRGSTVRYV 80 >6QW6-64 nrPDB Length = 139 Score = 36.2 bits (82), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Query: 15 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEA-EEFVAGVSHGTLGEIFI 73 P LK NH + V+LK N Y G LVS DN+ N+ L E G + E +I Sbjct: 3 PLSLLKTAQNHPMLVELK-NGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 61 Query: 74 RCNNVLYIR 82 R + + Y+R Sbjct: 62 RGSTIKYLR 70 >6BK8-g nrPDB Length = 101 Score = 34.3 bits (77), Expect = 0.013, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 5/59 (8%) Query: 25 HRVGVKLKFNSTEYRGTLVSTDNYFNLQLNE--AEEFVAGVSHGTLGEIFIRCNNVLYI 81 H V ++L +T YRG LV +++ N+QL + A E V+H + +IF+R + + +I Sbjct: 17 HIVSLELTTGAT-YRGKLVESEDSMNVQLRDVIATEPQGAVTH--MDQIFVRGSQIKFI 72 >4EMH-A nrPDB Length = 105 Score = 34.3 bits (77), Expect = 0.013, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%) Query: 12 PVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEA-EEFVAGVSHGTLGE 70 P+ P L + V+LK N + G L + DNY NL L E G L E Sbjct: 14 PMLPLTLLNATQGRPILVELK-NGETFNGHLENCDNYMNLTLREVIRTMPDGDKFFRLPE 72 Query: 71 IFIRCNNVLYIR 82 +IR NN+ Y+R Sbjct: 73 CYIRGNNIKYLR 84 >3JB9-F nrPDB Length = 117 Score = 33.1 bits (74), Expect = 0.026, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 18 FLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCNN 77 FL L N V ++LK N T GT+ S D N L + V G + + IR NN Sbjct: 6 FLMKLTNETVSIELK-NGTIVHGTITSVDMQMNTHLKAVKMTVKGREPVPVETLSIRGNN 64 Query: 78 VLY 80 + Y Sbjct: 65 IRY 67 >6QW6-4e nrPDB Length = 92 Score = 30.8 bits (68), Expect = 0.12, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Query: 40 GTLVSTDNYFNLQLNEAEEFVAGV-SHGTLGEIFIRCNNVLYIRELPN 86 G ++ D Y NL L++AEE + S LG I ++ +N+ ++ + N Sbjct: 45 GCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSVSN 92 >6ASO-C nrPDB Length = 97 Score = 30.0 bits (66), Expect = 0.24, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Query: 14 NPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFI 73 P LK ++ RV +KL+ T GTL + D++ N+ L++A E + +++ L E Sbjct: 3 TPLDLLKLNLDERVYIKLRGART-LVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESER 61 Query: 74 RCNNVLYIR 82 RC V +IR Sbjct: 62 RCEMV-FIR 69 >6QX9-62 nrPDB Length = 95 Score = 29.3 bits (64), Expect = 0.40, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Query: 18 FLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNE 55 F K LV V V+LK N GTL S D Y N++L + Sbjct: 6 FFKSLVGKDVVVELK-NDLSICGTLHSVDQYLNIKLTD 42 >6QDV-e nrPDB Length = 81 Score = 29.3 bits (64), Expect = 0.42, Method: Compositional matrix adjust. Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Query: 40 GTLVSTDNYFNLQLNEAEEFVAGV-SHGTLGEIFIRCNNV 78 G ++ D Y NL L++AEE + S LG I ++ +N+ Sbjct: 35 GCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNI 74 >3SWN-A nrPDB Length = 82 Score = 27.7 bits (60), Expect = 1.2, Method: Compositional matrix adjust. Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%) Query: 37 EYRGTLVSTDNYFNLQLNEAEEF--VAGVSH 65 E+ GTLV D+Y N+ L + E+ V GV+ Sbjct: 30 EFAGTLVGFDDYVNIVLKDVTEYDTVTGVTE 60 >4EMK-A nrPDB Length = 94 Score = 27.7 bits (60), Expect = 1.3, Method: Compositional matrix adjust. Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%) Query: 37 EYRGTLVSTDNYFNLQLNEAEEF--VAGVSH 65 E+ GTLV D+Y N+ L + E+ V GV+ Sbjct: 42 EFAGTLVGFDDYVNIVLKDVTEYDTVTGVTE 72 >4WZJ-C nrPDB Length = 118 Score = 27.3 bits (59), Expect = 1.7, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 18 FLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCNN 77 FL L + V ++LK N T+ GT+ D N L + + L + IR NN Sbjct: 6 FLMKLSHETVTIELK-NGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGNN 64 Query: 78 VLY 80 + Y Sbjct: 65 IRY 67 >5XJU-A nrPDB Length = 82 Score = 26.6 bits (57), Expect = 2.9, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%) Query: 18 FLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCNN 77 FL L + V ++LK N T+ GT+ D N L + + L + IR NN Sbjct: 6 FLMKLSHETVTIELK-NGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGNN 64 Query: 78 VLY 80 + Y Sbjct: 65 IRY 67 >3CDD-A nrPDB Length = 361 Score = 26.2 bits (56), Expect = 3.6, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 15/64 (23%) Query: 16 KPF-LKGLVNHRVG-----VKLKFNSTEY---------RGTLVSTDNYFNLQLNEAEEFV 60 KPF +K +VN VG ++++ T + RG L+++D + NL + A + Sbjct: 128 KPFGIKVIVNTDVGEPFQRIQIEQGETPHELLARLAKQRGVLLTSDTFGNLVITRASKTK 187 Query: 61 AGVS 64 AGVS Sbjct: 188 AGVS 191 >6O9M-2 nrPDB Length = 462 Score = 26.2 bits (56), Expect = 3.8, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 6/53 (11%) Query: 35 STEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCNNVLYI-RELPN 86 ST RG N +LQ +EF+ G+S G L ++ L + RELP+ Sbjct: 3 STPSRGL-----NRVHLQCRNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPS 50 >3KZW-A nrPDB Length = 515 Score = 25.8 bits (55), Expect = 4.4, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%) Query: 4 SSDISAMQP--VNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVS 44 + D S M P + P+ F + +VNH K+K + +Y TLVS Sbjct: 203 ARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVDVKDY-DTLVS 244 >1ZYK-A nrPDB Length = 345 Score = 25.0 bits (53), Expect = 7.3, Method: Compositional matrix adjust. Identities = 10/29 (34%), Positives = 16/29 (55%) Query: 47 NYFNLQLNEAEEFVAGVSHGTLGEIFIRC 75 N +L++NEAEE + G + EI + Sbjct: 12 NKSDLEINEAEELAKAIIRGEVPEILVSA 40 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1N9R-A nrPDB 137 1e-33 3JB9-I nrPDB 106 3e-24 6QDV-f nrPDB 105 3e-24 5Z58-f nrPDB 105 4e-24 6QX9-66 nrPDB 97 1e-21 3SWN-B nrPDB 93 3e-20 1LJO-A nrPDB 83 2e-17 1JBM-A nrPDB 83 3e-17 4XQ3-A nrPDB 77 2e-15 1TH7-A nrPDB 75 9e-15 4N0A-C nrPDB 61 9e-11 Sequences not found previously or not previously below threshold: 5MKL-A1 nrPDB 75 7e-15 1I8F-A nrPDB 67 2e-12 4C8Q-B nrPDB 62 8e-11 5VSU-B nrPDB 61 1e-10 4EMH-A nrPDB 52 6e-08 6QX9-62 nrPDB 51 1e-07 6AH0-d nrPDB 51 1e-07 5VSU-F nrPDB 51 1e-07 3JB9-J nrPDB 50 2e-07 6QW6-64 nrPDB 48 1e-06 4EMG-A nrPDB 47 2e-06 3JB9-H nrPDB 47 3e-06 6QW6-4e nrPDB 46 4e-06 3SWN-C nrPDB 45 6e-06 6AH0-t nrPDB 45 7e-06 4M77-E nrPDB 45 8e-06 6ASO-C nrPDB 45 9e-06 6QDV-e nrPDB 44 1e-05 3JCR-3 nrPDB 42 4e-05 4M75-A nrPDB 42 4e-05 6QX9-67 nrPDB 42 5e-05 6AH0-z nrPDB 42 6e-05 5ZWM-s nrPDB 42 8e-05 3PGG-A nrPDB 42 8e-05 6BK8-g nrPDB 42 9e-05 4M75-G nrPDB 41 1e-04 5LJ3-g nrPDB 41 1e-04 4C8Q-A nrPDB 41 1e-04 3JB9-E nrPDB 40 2e-04 6QX9-1b nrPDB 40 2e-04 4C8Q-D nrPDB 40 2e-04 3JB9-F nrPDB 40 2e-04 6ASO-D nrPDB 40 3e-04 5GMK-i nrPDB 40 3e-04 3JB9-D nrPDB 39 4e-04 4EMK-A nrPDB 39 5e-04 3SWN-A nrPDB 39 5e-04 4WZJ-C nrPDB 38 0.001 5XJU-A nrPDB 37 0.001 6ID1-a nrPDB 37 0.002 6QDV-d nrPDB 37 0.003 1D3B-A nrPDB 36 0.005 6ASO-G nrPDB 35 0.006 1M5Q-A nrPDB 35 0.009 5LQW-b nrPDB 32 0.052 5GM6-g nrPDB 32 0.058 6J6Q-g nrPDB 32 0.067 5GMK-m nrPDB 30 0.20 6B9R-A nrPDB 27 1.7 6HQA-B nrPDB 27 2.2 3JB9-G nrPDB 26 3.5 5MQF-a nrPDB 25 10.0 >1N9R-A nrPDB Length = 93 Score = 137 bits (345), Expect = 1e-33, Method: Composition-based stats. Identities = 86/86 (100%), Positives = 86/86 (100%) Query: 1 MSESSDISAMQPVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFV 60 MSESSDISAMQPVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFV Sbjct: 8 MSESSDISAMQPVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFV 67 Query: 61 AGVSHGTLGEIFIRCNNVLYIRELPN 86 AGVSHGTLGEIFIRCNNVLYIRELPN Sbjct: 68 AGVSHGTLGEIFIRCNNVLYIRELPN 93 >3JB9-I nrPDB Length = 78 Score = 106 bits (264), Expect = 3e-24, Method: Composition-based stats. Identities = 45/75 (60%), Positives = 54/75 (72%), Gaps = 1/75 (1%) Query: 9 AMQPVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTL 68 + PVNPKPFL+GL+ V V+LK+ EY+GTL S D+Y NLQL AEE V GV G L Sbjct: 2 SFVPVNPKPFLQGLIGKPVLVRLKWGQ-EYKGTLQSVDSYMNLQLLNAEELVDGVKTGDL 60 Query: 69 GEIFIRCNNVLYIRE 83 GEI IRCNNVL++ E Sbjct: 61 GEILIRCNNVLWVGE 75 >6QDV-f nrPDB Length = 72 Score = 105 bits (263), Expect = 3e-24, Method: Composition-based stats. Identities = 42/71 (59%), Positives = 49/71 (69%), Gaps = 1/71 (1%) Query: 12 PVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEI 71 P+NPKPFL GL V VKLK+ EY+G LVS D Y N+QL EE++ G G LGE+ Sbjct: 1 PLNPKPFLNGLTGKPVMVKLKW-GMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEV 59 Query: 72 FIRCNNVLYIR 82 IRCNNVLYIR Sbjct: 60 LIRCNNVLYIR 70 >5Z58-f nrPDB Length = 86 Score = 105 bits (262), Expect = 4e-24, Method: Composition-based stats. Identities = 42/71 (59%), Positives = 49/71 (69%), Gaps = 1/71 (1%) Query: 12 PVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEI 71 P+NPKPFL GL V VKLK+ EY+G LVS D Y N+QL EE++ G G LGE+ Sbjct: 4 PLNPKPFLNGLTGKPVMVKLKW-GMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEV 62 Query: 72 FIRCNNVLYIR 82 IRCNNVLYIR Sbjct: 63 LIRCNNVLYIR 73 >6QX9-66 nrPDB Length = 80 Score = 97.4 bits (241), Expect = 1e-21, Method: Composition-based stats. Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 9 AMQPVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTL 68 +++ P FLK ++ V VKL + +YRG L D Y N+ L + EE+V G Sbjct: 2 SLRKQTPSDFLKQIIGRPVVVKLN-SGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY 60 Query: 69 GEIFIRCNNVLYIR 82 G+ FIR NNVLYI Sbjct: 61 GDAFIRGNNVLYIS 74 >3SWN-B nrPDB Length = 77 Score = 92.8 bits (229), Expect = 3e-20, Method: Composition-based stats. Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Query: 14 NPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFI 73 +P FL ++ +V ++L + +Y+G L D Y NL L EE+V G G+ FI Sbjct: 6 SPNEFLNKVIGKKVLIRLS-SGVDYKGILSCLDGYMNLALERTEEYVNGKKTNVYGDAFI 64 Query: 74 RCNNVLYIRELPN 86 R NNVLY+ L + Sbjct: 65 RGNNVLYVSALDD 77 >1LJO-A nrPDB Length = 77 Score = 83.1 bits (204), Expect = 2e-17, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 34/69 (49%) Query: 15 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIR 74 P +K +V + V++K + G L D+Y NL L A E +LGEI +R Sbjct: 6 PNQMVKSMVGKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAMECKGEEKVRSLGEIVLR 65 Query: 75 CNNVLYIRE 83 NNV+ I+ Sbjct: 66 GNNVVLIQP 74 >1JBM-A nrPDB Length = 86 Score = 82.8 bits (203), Expect = 3e-17, Method: Composition-based stats. Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 5/80 (6%) Query: 6 DISAMQPVNPKPFLKGL---VNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAG 62 D+S+ Q VN + L L +N V +KLK E+RG L S D + NL LN+AEE G Sbjct: 3 DVSS-QRVNVQRPLDALGNSLNSPVIIKLKG-DREFRGVLKSFDLHMNLVLNDAEELEDG 60 Query: 63 VSHGTLGEIFIRCNNVLYIR 82 LG + IR +N++YI Sbjct: 61 EVTRRLGTVLIRGDNIVYIS 80 >4XQ3-A nrPDB Length = 91 Score = 77.4 bits (189), Expect = 2e-15, Method: Composition-based stats. Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Query: 14 NPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAG--VSHGTLGEI 71 NP L+ +N V VKLK + +EY G L TD NL L + E G G + Sbjct: 11 NPLKSLRTAINRIVLVKLK-DGSEYIGKLEQTDGTMNLVLRDCTEIREGTSEPVAKYGRV 69 Query: 72 FIRCNNVLYIR 82 IR +N+L+I Sbjct: 70 LIRGSNILFIS 80 >5MKL-A1 nrPDB Length = 87 Score = 75.0 bits (183), Expect = 7e-15, Method: Composition-based stats. Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 3/71 (4%) Query: 14 NPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGV--SHGTLGEI 71 NP LK +N V VKLK N EY G L +D NL L + E+ G G + Sbjct: 7 NPLKSLKTALNKIVLVKLK-NGEEYVGRLEQSDGTMNLVLKDCTEYREGTSDPVAKYGRV 65 Query: 72 FIRCNNVLYIR 82 IR +N+L+I Sbjct: 66 LIRGSNILFIS 76 >1TH7-A nrPDB Length = 81 Score = 74.7 bits (182), Expect = 9e-15, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 17 PFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCN 76 L +N+ V VKLK N E RG L S D + NL L+++EE + S LG I IR + Sbjct: 12 KVLAESLNNLVLVKLKGNK-EVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGD 70 Query: 77 NVLYIREL 84 NV+ I L Sbjct: 71 NVILISPL 78 >1I8F-A nrPDB Length = 81 Score = 67.0 bits (162), Expect = 2e-12, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 2/67 (2%) Query: 19 LKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCNNV 78 L+ + +V VKL+ +S E RG L S D + NL L +AEE + G + G + +R NV Sbjct: 16 LQDSIGKQVLVKLR-DSHEIRGILRSFDQHVNLLLEDAEEIIDGNVYKR-GTMVVRGENV 73 Query: 79 LYIRELP 85 L+I +P Sbjct: 74 LFISPVP 80 >4C8Q-B nrPDB Length = 105 Score = 61.6 bits (148), Expect = 8e-11, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Query: 18 FLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNE--AEEFVAGVSHGTLGEIFIRC 75 F K LV+ V V+LK N E +GTL S D + NL+L+ + G++ IFIR Sbjct: 16 FFKTLVDQEVVVELK-NDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPHLGSVRNIFIRG 74 Query: 76 NNVLYI 81 + V Y+ Sbjct: 75 STVRYV 80 >4N0A-C nrPDB Length = 109 Score = 61.2 bits (147), Expect = 9e-11, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Query: 18 FLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNE--AEEFVAGVSHGTLGEIFIRC 75 F K LV+ V V+LK N E +GTL S D + NL+L+ + G++ IFIR Sbjct: 20 FFKTLVDQEVVVELK-NDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPHLGSVRNIFIRG 78 Query: 76 NNVLYI 81 + V Y+ Sbjct: 79 STVRYV 84 >5VSU-B nrPDB Length = 98 Score = 61.2 bits (147), Expect = 1e-10, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%) Query: 18 FLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNE--AEEFVAGVSHGTLGEIFIRC 75 F K LV+ V V+LK N E +GTL S D + NL+L+ + G++ IFIR Sbjct: 9 FFKTLVDQEVVVELK-NDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPHLGSVRNIFIRG 67 Query: 76 NNVLYI 81 + V Y+ Sbjct: 68 STVRYV 73 >4EMH-A nrPDB Length = 105 Score = 51.9 bits (123), Expect = 6e-08, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 2/76 (2%) Query: 12 PVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEA-EEFVAGVSHGTLGE 70 P+ P L + V+LK N + G L + DNY NL L E G L E Sbjct: 14 PMLPLTLLNATQGRPILVELK-NGETFNGHLENCDNYMNLTLREVIRTMPDGDKFFRLPE 72 Query: 71 IFIRCNNVLYIRELPN 86 +IR NN+ Y+R Sbjct: 73 CYIRGNNIKYLRIQDE 88 >6QX9-62 nrPDB Length = 95 Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Query: 18 FLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNE-AEEFVAGVSHG-TLGEIFIRC 75 F K LV V V+LK N GTL S D Y N++L + + H ++ FIR Sbjct: 6 FFKSLVGKDVVVELK-NDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRG 64 Query: 76 NNVLYIR 82 + V Y++ Sbjct: 65 SVVRYVQ 71 >6AH0-d nrPDB Length = 76 Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 17 PFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCN 76 P LK ++ ++ +KL +G L D + NL ++E E +G + IR N Sbjct: 7 PELKKFMDKKLSLKLNG-GRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGN 65 Query: 77 NVLYIRELP 85 +++ + L Sbjct: 66 SIIMLEALE 74 >5VSU-F nrPDB Length = 88 Score = 50.8 bits (120), Expect = 1e-07, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 5/71 (7%) Query: 17 PFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAG----VSHGTLGEIF 72 FL ++ V VKL + Y G L S D + N+ L+ A E + + ++F Sbjct: 16 EFLSDIIGKTVNVKL-ASGLLYSGRLESIDGFMNVALSSATEHYESNNNKLLNKFNSDVF 74 Query: 73 IRCNNVLYIRE 83 +R V+YI E Sbjct: 75 LRGTQVMYISE 85 >3JB9-J nrPDB Length = 77 Score = 50.0 bits (118), Expect = 2e-07, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Query: 17 PFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCN 76 P LK ++ +V V+L + Y G L D + N+ L ++ E +G + IR N Sbjct: 7 PDLKKYLDRQVFVQLNGSRKVY-GVLRGYDIFLNIVLEDSIEEKVDGEKVKIGSVAIRGN 65 Query: 77 NVLYIRELP 85 +V+ I L Sbjct: 66 SVIMIETLD 74 >6QW6-64 nrPDB Length = 139 Score = 47.7 bits (112), Expect = 1e-06, Method: Composition-based stats. Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Query: 15 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAE-EFVAGVSHGTLGEIFI 73 P LK NH + V+LK N Y G LVS DN+ N+ L E G + E +I Sbjct: 3 PLSLLKTAQNHPMLVELK-NGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 61 Query: 74 RCNNVLYIRELPN 86 R + + Y+R +P+ Sbjct: 62 RGSTIKYLR-IPD 73 >4EMG-A nrPDB Length = 93 Score = 46.9 bits (110), Expect = 2e-06, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 14/89 (15%) Query: 8 SAMQPVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVA------ 61 SA P ++ ++ V VKL+ E G L + D + N+ L +AEE V Sbjct: 3 SAQAVAEPLDLVRLSLDEIVYVKLRG-DRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEE 61 Query: 62 -------GVSHGTLGEIFIRCNNVLYIRE 83 +F+R ++V+ I Sbjct: 62 TDKDKALKTIRKHYEMLFVRGDSVILIAP 90 >3JB9-H nrPDB Length = 84 Score = 46.5 bits (109), Expect = 3e-06, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 3/73 (4%) Query: 15 PKPFLKGLVNH--RVGVKL-KFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEI 71 P F+ L+ V + L + +G + D + N+ L++A + A + LG I Sbjct: 12 PINFIFKLLQQHTPVSIWLFEQTDIRLQGQIRGFDEFMNIVLDDAVQVDAKNNKRELGRI 71 Query: 72 FIRCNNVLYIREL 84 ++ +N+ I+ + Sbjct: 72 LLKGDNITLIQAI 84 >6QW6-4e nrPDB Length = 92 Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Query: 35 STEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGT-LGEIFIRCNNVLYIRELPN 86 + G ++ D Y NL L++AEE + LG I ++ +N+ ++ + N Sbjct: 40 NMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSVSN 92 >3SWN-C nrPDB Length = 117 Score = 45.4 bits (106), Expect = 6e-06, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 7/59 (11%) Query: 34 NSTEYRGTLVSTDNYFNLQLNEAEEF----VAGVSHG---TLGEIFIRCNNVLYIRELP 85 + G L D NL L++ EE G G LG + +R ++ I + Sbjct: 46 GGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVVVRGTTLVLIAPMD 104 >6AH0-t nrPDB Length = 91 Score = 45.0 bits (105), Expect = 7e-06, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 4/72 (5%) Query: 15 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFV---AGVSHGTLGEI 71 P + + R+ + +K + E GTL+ D++ N+ L + EF G L +I Sbjct: 14 PLELVDKCIGSRIHIVMK-SDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQI 72 Query: 72 FIRCNNVLYIRE 83 + NN+ + Sbjct: 73 LLNGNNITMLVP 84 >4M77-E nrPDB Length = 93 Score = 45.0 bits (105), Expect = 8e-06, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 9/83 (10%) Query: 9 AMQPVNPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEA--------EEFV 60 ++ + P + +N +V + L+ N E+ GTLV D++ N+ L +A +E Sbjct: 2 SLPEILPLEVIDKTINQKVLIVLQSN-REFEGTLVGFDDFVNVILEDAVEWLIDPEDESR 60 Query: 61 AGVSHGTLGEIFIRCNNVLYIRE 83 G + + NN+ + Sbjct: 61 NEKVMQHHGRMLLSGNNIAILVP 83 >6ASO-C nrPDB Length = 97 Score = 44.6 bits (104), Expect = 9e-06, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 8/76 (10%) Query: 14 NPKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVA-------GVSHG 66 P LK ++ RV +KL+ T GTL + D++ N+ L++A E + S Sbjct: 3 TPLDLLKLNLDERVYIKLRGART-LVGTLQAFDSHCNIVLSDAVETIYQLNNEELSESER 61 Query: 67 TLGEIFIRCNNVLYIR 82 +FIR + V I Sbjct: 62 RCEMVFIRGDTVTLIS 77 >6QDV-e nrPDB Length = 81 Score = 44.2 bits (103), Expect = 1e-05, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 35 STEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGT-LGEIFIRCNNVLYIREL 84 + G ++ D Y NL L++AEE + LG I ++ +N+ ++ + Sbjct: 30 NMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSV 80 >3JCR-3 nrPDB Length = 102 Score = 42.3 bits (98), Expect = 4e-05, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 18/97 (18%) Query: 4 SSDISAMQPVN----PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEF 59 + D+ Q N P ++ ++ R+ VK++ N E RG L + D + N+ L + EE Sbjct: 2 ADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMR-NDRELRGRLHAYDQHLNMILGDVEET 60 Query: 60 VA-------------GVSHGTLGEIFIRCNNVLYIRE 83 V + + +F+R + V+ + Sbjct: 61 VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAP 97 >4M75-A nrPDB Length = 144 Score = 42.3 bits (98), Expect = 4e-05, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 6/68 (8%) Query: 23 VNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFV-----AGVSHGTLGEIFIRCNN 77 V+ ++ V L+ + G L + D Y NL L + E + + G IR N Sbjct: 22 VDRKIFVLLR-DGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGEN 80 Query: 78 VLYIRELP 85 V+ + E+ Sbjct: 81 VVMLGEVD 88 >6QX9-67 nrPDB Length = 103 Score = 42.3 bits (98), Expect = 5e-05, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 26/75 (34%), Gaps = 9/75 (12%) Query: 19 LKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAG--------VSHGTLGE 70 L ++ + VK + E G L D NL L+ E++ LG Sbjct: 15 LSKYIDKTIRVKFQG-GREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGL 73 Query: 71 IFIRCNNVLYIRELP 85 + R +V+ I Sbjct: 74 VVCRGTSVVLICPQD 88 >6AH0-z nrPDB Length = 96 Score = 41.9 bits (97), Expect = 6e-05, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Query: 19 LKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFV----AGVSHGTLGEIFIR 74 L+ +N V V + + GTL D NL L+E+ E V GV LG +R Sbjct: 5 LENYINRTVAV-ITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLYIVR 63 Query: 75 CNNVLYIRELPN 86 +NV I E+ Sbjct: 64 GDNVAVIGEIDE 75 >5ZWM-s nrPDB Length = 187 Score = 41.5 bits (96), Expect = 8e-05, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 12/83 (14%) Query: 15 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHG-------- 66 P L ++ ++LK +G L + DN+ NL L+ E+ + Sbjct: 3 PLYLLTNAKGQQMQIELKNGEI-IQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESS 61 Query: 67 ---TLGEIFIRCNNVLYIRELPN 86 L EI+IR + +I+ N Sbjct: 62 KAVKLNEIYIRGTFIKFIKLQDN 84 >3PGG-A nrPDB Length = 121 Score = 41.5 bits (96), Expect = 8e-05, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 16/84 (19%) Query: 15 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEF--------------- 59 P + + +R+ V +K + E+ G L D Y N+ L++ +E+ Sbjct: 29 PLALIDKCIGNRIYVVMKGDK-EFSGVLRGFDEYVNMVLDDVQEYGFKADEEDISGGNKK 87 Query: 60 VAGVSHGTLGEIFIRCNNVLYIRE 83 + V L I + NNV + Sbjct: 88 LKRVMVNRLETILLSGNNVAMLVP 111 >6BK8-g nrPDB Length = 101 Score = 41.5 bits (96), Expect = 9e-05, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Query: 15 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIR 74 P L H V ++L +T YRG LV +++ N+QL + + + +IF+R Sbjct: 7 PVKLLNEAQGHIVSLELTTGAT-YRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVR 65 Query: 75 CNNVLYI 81 + + +I Sbjct: 66 GSQIKFI 72 >4M75-G nrPDB Length = 122 Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 12/83 (14%) Query: 15 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHG-------- 66 P L ++ ++LK +G L + DN+ NL L+ E+ + Sbjct: 32 PLYLLTNAKGQQMQIELKNGEI-IQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESS 90 Query: 67 ---TLGEIFIRCNNVLYIRELPN 86 L EI+IR + +I+ N Sbjct: 91 KAVKLNEIYIRGTFIKFIKLQDN 113 >5LJ3-g nrPDB Length = 77 Score = 40.8 bits (94), Expect = 1e-04, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 4/72 (5%) Query: 17 PFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHG--TLG-EIFI 73 P LK ++ ++ + + + + G L D + N+ L++A E LG + I Sbjct: 5 PELKKYMDKKILLNINGS-RKVAGILRGYDIFLNVVLDDAMEINGEDPANNHQLGLQTVI 63 Query: 74 RCNNVLYIRELP 85 R N+++ + L Sbjct: 64 RGNSIISLEALD 75 >4C8Q-A nrPDB Length = 101 Score = 40.8 bits (94), Expect = 1e-04, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 6/68 (8%) Query: 23 VNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFV-----AGVSHGTLGEIFIRCNN 77 V+ ++ V L+ + G L + D Y NL L + E + + G IR N Sbjct: 6 VDRKIFVLLR-DGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEEDRGIFMIRGEN 64 Query: 78 VLYIRELP 85 V+ + E+ Sbjct: 65 VVMLGEVD 72 >3JB9-E nrPDB Length = 147 Score = 40.4 bits (93), Expect = 2e-04, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 12/73 (16%) Query: 21 GLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVS-----------HGTLG 69 L+NH + V K + + G L++ D + NL L++ +E+ LG Sbjct: 8 SLLNHSLNVTTK-DGRTFVGQLLAFDGFMNLVLSDCQEYRHIKKQNVPSNSVYEEKRMLG 66 Query: 70 EIFIRCNNVLYIR 82 + +R ++ + Sbjct: 67 LVILRGEFIVSLS 79 >6QX9-1b nrPDB Length = 240 Score = 40.4 bits (93), Expect = 2e-04, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 10/56 (17%) Query: 34 NSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGT----------LGEIFIRCNNVL 79 + + GT + D + NL L + +EF + LG + +R N++ Sbjct: 23 DGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAEREEKRVLGLVLLRGENLV 78 >4C8Q-D nrPDB Length = 114 Score = 40.4 bits (93), Expect = 2e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 12/83 (14%) Query: 15 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHG-------- 66 P L ++ ++LK +G L + DN+ NL L+ E+ + Sbjct: 3 PLYLLTNAKGQQMQIELKNGEI-IQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESS 61 Query: 67 ---TLGEIFIRCNNVLYIRELPN 86 L EI+IR + +I+ N Sbjct: 62 KAVKLNEIYIRGTFIKFIKLQDN 84 >3JB9-F nrPDB Length = 117 Score = 40.0 bits (92), Expect = 2e-04, Method: Composition-based stats. Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Query: 17 PFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCN 76 FL L N V ++LK N T GT+ S D N L + V G + + IR N Sbjct: 5 RFLMKLTNETVSIELK-NGTIVHGTITSVDMQMNTHLKAVKMTVKGREPVPVETLSIRGN 63 Query: 77 NVLY 80 N+ Y Sbjct: 64 NIRY 67 >6ASO-D nrPDB Length = 93 Score = 39.6 bits (91), Expect = 3e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 12/83 (14%) Query: 15 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHG-------- 66 P L ++ ++LK +G L + DN+ NL L+ E+ + Sbjct: 3 PLYLLTNAKGQQMQIELKNGEI-IQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESS 61 Query: 67 ---TLGEIFIRCNNVLYIRELPN 86 L EI+IR + +I+ N Sbjct: 62 KAVKLNEIYIRGTFIKFIKLQDN 84 >5GMK-i nrPDB Length = 94 Score = 39.6 bits (91), Expect = 3e-04, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 8/59 (13%) Query: 35 STEYRGTLVSTDNYFNLQLNEAEEF--------VAGVSHGTLGEIFIRCNNVLYIRELP 85 +G +V D + N+ ++EA E LG+I ++ +N+ I Sbjct: 36 GIRIKGKIVGFDEFMNVVIDEAVEIPVNSADGKEDVEKGTPLGKILLKGDNITLITSAD 94 >3JB9-D nrPDB Length = 97 Score = 39.2 bits (90), Expect = 4e-04, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 17 PFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCN 76 L H V ++L+ N + YRG L+ ++ N Q+ + L +++IR + Sbjct: 6 KLLHETQGHIVTMELE-NGSTYRGKLIEAEDNMNCQMRDISVTARDGRVSHLDQVYIRGS 64 Query: 77 NVLYI 81 ++ ++ Sbjct: 65 HIRFL 69 >4EMK-A nrPDB Length = 94 Score = 38.8 bits (89), Expect = 5e-04, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Query: 15 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVA-GVSHGTLGEIFI 73 P + + + V +K + E+ GTLV D+Y N+ L + E+ E+ + Sbjct: 21 PLELIDKCIGSNLWVIMK-SEREFAGTLVGFDDYVNIVLKDVTEYDTVTGVTEKHSEMLL 79 Query: 74 RCN 76 N Sbjct: 80 NGN 82 >3SWN-A nrPDB Length = 82 Score = 38.8 bits (89), Expect = 5e-04, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Query: 15 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVA-GVSHGTLGEIFI 73 P + + + V +K + E+ GTLV D+Y N+ L + E+ E+ + Sbjct: 9 PLELIDKCIGSNLWVIMK-SEREFAGTLVGFDDYVNIVLKDVTEYDTVTGVTEKHSEMLL 67 Query: 74 RCN 76 N Sbjct: 68 NGN 70 >4WZJ-C nrPDB Length = 118 Score = 37.7 bits (86), Expect = 0.001, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 17 PFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCN 76 FL L + V ++LK N T+ GT+ D N L + + L + IR N Sbjct: 5 RFLMKLSHETVTIELK-NGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGN 63 Query: 77 NVLY 80 N+ Y Sbjct: 64 NIRY 67 >5XJU-A nrPDB Length = 82 Score = 37.3 bits (85), Expect = 0.001, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 17 PFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCN 76 FL L + V ++LK N T+ GT+ D N L + + L + IR N Sbjct: 5 RFLMKLSHETVTIELK-NGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGN 63 Query: 77 NVLY 80 N+ Y Sbjct: 64 NIRY 67 >6ID1-a nrPDB Length = 126 Score = 36.9 bits (84), Expect = 0.002, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 2/72 (2%) Query: 15 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIR 74 P L H V + YRG L+ ++ N Q++ L +++IR Sbjct: 6 PIKVLHEAEGHIVTCETNTGEV-YRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQVYIR 64 Query: 75 CNNVLYIRELPN 86 + + ++ LP+ Sbjct: 65 GSKIRFL-ILPD 75 >6QDV-d nrPDB Length = 84 Score = 36.5 bits (83), Expect = 0.003, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 15 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIR 74 P L H V + YRG L+ ++ N Q++ L +++IR Sbjct: 5 PIKVLHEAEGHIVTCETNTGEV-YRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQVYIR 63 Query: 75 CNNVLYI 81 + + ++ Sbjct: 64 GSKIRFL 70 >1D3B-A nrPDB Length = 75 Score = 35.8 bits (81), Expect = 0.005, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 2/72 (2%) Query: 15 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIR 74 P L H V + YRG L+ ++ N Q++ L +++IR Sbjct: 6 PIKVLHEAEGHIVTCETNTGEV-YRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQVYIR 64 Query: 75 CNNVLYIRELPN 86 + ++ LP+ Sbjct: 65 GCKIRFL-ILPD 75 >6ASO-G nrPDB Length = 115 Score = 35.4 bits (80), Expect = 0.006, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 12/63 (19%) Query: 24 NHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAG-----------VSHGTLGEIF 72 + ++ VKL G L D NL L++ E+++ + LG Sbjct: 35 DSKIRVKLMGGKL-VIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLTV 93 Query: 73 IRC 75 IR Sbjct: 94 IRG 96 >1M5Q-A nrPDB Length = 130 Score = 34.6 bits (78), Expect = 0.009, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 5/63 (7%) Query: 19 LKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIRCNNV 78 L L+ V V L Y+G L + DN N+ L A + + +FI + Sbjct: 5 LNNLLGREVQVVLSNGEV-YKGVLHAVDNQLNIVLANA----SNKAGEKFNRVFIMYRYI 59 Query: 79 LYI 81 ++I Sbjct: 60 VHI 62 >5LQW-b nrPDB Length = 196 Score = 32.3 bits (72), Expect = 0.052, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Query: 19 LKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEE 58 L L+++++ V L + Y G L++ D + NL LNE E Sbjct: 12 LANLIDYKLRV-LTQDGRVYIGQLMAFDKHMNLVLNECIE 50 >5GM6-g nrPDB Length = 94 Score = 31.9 bits (71), Expect = 0.058, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 8/67 (11%) Query: 26 RVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTL-------GEIFIRCNNV 78 V + L+ N+ + + + D + N+ L +E + ++F+R ++V Sbjct: 29 PVIISLR-NNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRERFISKLFLRGDSV 87 Query: 79 LYIRELP 85 + + + P Sbjct: 88 IVVLKTP 94 >6J6Q-g nrPDB Length = 110 Score = 31.9 bits (71), Expect = 0.067, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 8/67 (11%) Query: 26 RVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTL-------GEIFIRCNNV 78 V + L+ N+ + + + D + N+ L +E + ++F+R ++V Sbjct: 43 PVIISLR-NNHKIIARVKAFDRHCNMVLENVKELWTEKKGKNVINRERFISKLFLRGDSV 101 Query: 79 LYIRELP 85 + + + P Sbjct: 102 IVVLKTP 108 >5GMK-m nrPDB Length = 146 Score = 30.4 bits (67), Expect = 0.20, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Query: 18 FLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNE 55 FLK L N +V ++LK N T GTL S N L + Sbjct: 6 FLKKLRNEQVTIELK-NGTTVWGTLQSVSPQMNAILTD 42 >6B9R-A nrPDB Length = 450 Score = 27.3 bits (59), Expect = 1.7, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 6/52 (11%) Query: 2 SESSDISAMQPVNPKPF------LKGLVNHRVGVKLKFNSTEYRGTLVSTDN 47 S + D+ +P P P L L V V+ ++N +Y G L D+ Sbjct: 344 SLAVDVLTARPDAPLPPTYQHQYLYVLGEQPVSVRWRYNGEQYDGRLEPGDS 395 >6HQA-B nrPDB Length = 722 Score = 26.9 bits (58), Expect = 2.2, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 14/33 (42%) Query: 3 ESSDISAMQPVNPKPFLKGLVNHRVGVKLKFNS 35 + +++S QP P+ F +N V L Sbjct: 26 QQANVSNQQPQKPQQFSAADLNRIVLEYLNKKG 58 >3JB9-G nrPDB Length = 115 Score = 26.1 bits (56), Expect = 3.5, Method: Composition-based stats. Identities = 10/66 (15%), Positives = 25/66 (37%), Gaps = 13/66 (19%) Query: 34 NSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLG-------------EIFIRCNNVLY 80 N+ + + + D + N+ L +E G ++F+R + V+ Sbjct: 49 NNKKLLARVKAFDRHSNMVLENVKEMWTEKKRTASGKKGKAINKDRFISKMFLRGDGVVL 108 Query: 81 IRELPN 86 + +P+ Sbjct: 109 VVRIPS 114 >5MQF-a nrPDB Length = 118 Score = 24.6 bits (52), Expect = 10.0, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 29/72 (40%), Gaps = 15/72 (20%) Query: 24 NHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGV--------------SHGTLG 69 N +V + + N + G + + D + N+ L +E V + Sbjct: 39 NTQVLINCRNNK-KLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYIS 97 Query: 70 EIFIRCNNVLYI 81 ++F+R ++V+ + Sbjct: 98 KMFLRGDSVIVV 109 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.139 0.347 Lambda K H 0.267 0.0424 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,946,913 Number of Sequences: 36641 Number of extensions: 89568 Number of successful extensions: 324 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 207 Number of HSP's gapped (non-prelim): 97 length of query: 86 length of database: 10,336,785 effective HSP length: 55 effective length of query: 31 effective length of database: 8,321,530 effective search space: 257967430 effective search space used: 257967430 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 53 (25.0 bits)