BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P54970
         (439 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

1XMB-A nrPDB                                                          860   0.0  
3IO1-A nrPDB                                                          101   5e-22
4O23-A nrPDB                                                           48   1e-05
1CG2-A nrPDB                                                           38   0.008
3RZA-A nrPDB                                                           33   0.19 
2AP1-A nrPDB                                                           32   0.49 
3CT9-A nrPDB                                                           31   0.87 
5C5I-A nrPDB                                                           30   1.6  
4PU3-A nrPDB                                                           30   2.7  
1BZS-A nrPDB                                                           29   3.6  
2RB7-A nrPDB                                                           29   5.0  
5JLC-A nrPDB                                                           28   6.4  

>1XMB-A nrPDB
          Length = 418

 Score =  860 bits (2223), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/418 (100%), Positives = 418/418 (100%)

Query: 22  SESPWIAEDTSQIQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELEL 81
           SESPWIAEDTSQIQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELEL
Sbjct: 1   SESPWIAEDTSQIQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELEL 60

Query: 82  IGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDG 141
           IGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDG
Sbjct: 61  IGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDG 120

Query: 142 HVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSAR 201
           HVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSAR
Sbjct: 121 HVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSAR 180

Query: 202 IPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETD 261
           IPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETD
Sbjct: 181 IPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETD 240

Query: 262 PLDSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFTGFTQLQQRVKEVITKQAAVHRCNAS 321
           PLDSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFTGFTQLQQRVKEVITKQAAVHRCNAS
Sbjct: 241 PLDSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFTGFTQLQQRVKEVITKQAAVHRCNAS 300

Query: 322 VNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPGHF 381
           VNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPGHF
Sbjct: 301 VNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPGHF 360

Query: 382 SLLGMQDETNGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEKASKGSVSGFHEEL 439
           SLLGMQDETNGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEKASKGSVSGFHEEL
Sbjct: 361 SLLGMQDETNGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEKASKGSVSGFHEEL 418


>3IO1-A nrPDB
          Length = 445

 Score =  101 bits (252), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 113/244 (46%), Gaps = 21/244 (8%)

Query: 9   LTFQLLLFLLSVS-SESPWIAEDTSQIQTKLLEFAKSPEVFDWMVKI-------RRKIHE 60
           ++ QL  +L  ++ S + W  +     ++  LEF  + +V D +  +       R  I  
Sbjct: 1   MSLQLDEYLRQLAPSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDA 60

Query: 61  NPELGYEELETSKLIRSELELIGIKYRYPVAI----TGVIGYIGTGEP-PFVALRADMDA 115
           +  +G  + ET           G   R+  A      GV+  + TG P P +A R DMDA
Sbjct: 61  DSRMGLPDEETLARAFERAREQGAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDA 120

Query: 116 LPIQEGVEWEHK-------SKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIF 168
           L + E  +  H+       S  AG MHACGHDGH  + LG A +L ++   L G + LIF
Sbjct: 121 LDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGLAHVLKQYAAQLNGVIKLIF 180

Query: 169 QPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGK 228
           QPAEEG  GA+ M   G + +V+    IH+   +P G       +F+A    F+   +G 
Sbjct: 181 QPAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDNFMA-TTKFDVQFSGV 239

Query: 229 GGHA 232
             HA
Sbjct: 240 AAHA 243


>4O23-A nrPDB
          Length = 384

 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 78/353 (22%), Positives = 133/353 (37%), Gaps = 63/353 (17%)

Query: 105 PFVALRADMDALPIQEGVEW--------EHKSKIAGKMHACGHDGHVTMLLGAAKILHEH 156
           P V      D +P     +W        E   ++ G+  A         +    + + +H
Sbjct: 64  PVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKH 123

Query: 157 RHHLQGTVVLIFQPAEEG--LSGAKKMREEGALKNVEAIFGI--------HLSARIPFGK 206
            +H QG++ L+    EEG  L G  K+ +    ++    + I         L   I  G+
Sbjct: 124 PNH-QGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIVGEPTAVDKLGDMIKNGR 182

Query: 207 AASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRE-TDPLDS 265
             S +G+           + GK GH A P   I+PV   +  +L L Q V  E  +    
Sbjct: 183 RGSLSGNL---------TVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPP 233

Query: 266 KVVTVSKVNGGN-AFNVIPDSITIGGTLRAFTGFTQ--LQQRVKEVITKQAAVH----RC 318
               +S +NGG  A NVIP  + +    R  T  T+  L+QRV  ++ K    +     C
Sbjct: 234 TSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSC 293

Query: 319 NASVNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIP 378
           +    LT  G+                  V R  + +   +EA       + S    T  
Sbjct: 294 SGQPFLTQAGK---------------LTDVARAAIAETCGIEA-------ELSTTGGTSD 331

Query: 379 GHFSLLGMQDETNGYASSHSPLYRINEDV----LPYGAAIHASMAVQYLKEKA 427
           G F +  +  E      S++ +++INE+V    +P  +A++  +  + L   A
Sbjct: 332 GRF-IKAIAQELIELGPSNATIHQINENVRLNDIPKLSAVYEGILARLLAGNA 383


>1CG2-A nrPDB
          Length = 393

 Score = 38.1 bits (87), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 12/155 (7%)

Query: 141 GHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEE-GLSGAKKMREEGALKNVEAIFGIHLS 199
           G   ++L   K+L E+     GT+ ++F   EE G  G++ + +E      EA    ++ 
Sbjct: 122 GGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRDLIQE------EAKLADYVL 175

Query: 200 ARIPFGKAASRAGSFLAGAGVFEAVITGKGGHA-AIPQHTIDPVVAASSIVLSLQQLVSR 258
           +  P      +     +G    +  ITGK  HA A P+  ++ +V AS +VL    +   
Sbjct: 176 SFEPTSAGDEKLSLGTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNI--- 232

Query: 259 ETDPLDSKVVTVSKVNGGNAFNVIPDSITIGGTLR 293
             D   +     +    GN  N+IP S T+   +R
Sbjct: 233 -DDKAKNLRFNWTIAKAGNVSNIIPASATLNADVR 266


>3RZA-A nrPDB
          Length = 396

 Score = 33.5 bits (75), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 50/230 (21%), Positives = 95/230 (41%), Gaps = 33/230 (14%)

Query: 102 GEPPFVALRADMDAL-------PI--QEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKI 152
           GE P + L + MD +       PI   +G  +   + I G     G    +  +L   ++
Sbjct: 88  GEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAG----LAAMLEVLQV 143

Query: 153 LHEHRHHLQGTVVLIFQPAEE-GLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRA 211
           + E +    G +  +    EE GL GAK++  E     ++A FG  + A    G     A
Sbjct: 144 IKEQQIP-HGQIQFVITVGEESGLIGAKELNSE----LLDADFGYAIDASADVGTTVVGA 198

Query: 212 GSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVS 271
            + +    +  A I GK  HA+ P+  +  +  A+    ++ ++   + D + +    + 
Sbjct: 199 PTQM----LISAKIIGKTAHASTPKEGVSAINIAAK---AISRMKLGQVDEITT--ANIG 249

Query: 272 KVNGGNAFNVIPDSITIGGTLRAFTGFTQLQQRVKEVITKQAAVHRCNAS 321
           K +GG+A N++ D + +    R+        +R+K  +     V    AS
Sbjct: 250 KFHGGSATNIVADEVILEAEARSHD-----PERIKTQVKHMTDVFETTAS 294


>2AP1-A nrPDB
          Length = 327

 Score = 32.0 bits (71), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 4/89 (4%)

Query: 219 GVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNA 278
           G  E  ++G+G  A + QH  D  + A  I+ +L +    +      + + +  V  GN 
Sbjct: 207 GCIENYLSGRG-FAWLYQHYYDQSLQAPEII-ALWEQGDEQAHAHVERYLDLLAVCLGNI 264

Query: 279 FNVI-PDSITIGGTLRAFTGF-TQLQQRV 305
             ++ PD + IGG L  FT   TQL +R+
Sbjct: 265 LTIVDPDLLVIGGGLSNFTAITTQLAERL 293


>3CT9-A nrPDB
          Length = 356

 Score = 31.2 bits (69), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 33/78 (42%)

Query: 217 GAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGG 276
           G  V +   TGK GHAA  +         + I         +E+  L    ++V+ +N G
Sbjct: 174 GLMVLDVTATGKAGHAARDEGDNAIYKVLNDIAWFRDYRFEKESPLLGPVKMSVTVINAG 233

Query: 277 NAFNVIPDSITIGGTLRA 294
              NV+PD  T    +R+
Sbjct: 234 TQHNVVPDKCTFVVDIRS 251


>5C5I-A nrPDB
          Length = 316

 Score = 30.4 bits (67), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 212 GSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIV----LSLQQLVSRETDPLDSKV 267
           G  L  A + EA+ +G+ GHA +    ++P+  AS       +++   +S  TDP  +  
Sbjct: 232 GPILDSAALIEALDSGRIGHAVLDVFEVEPLPEASPFWGHPKVTVLPHISAATDPETASA 291

Query: 268 VTVSKVNGGNAFNVIPDSITI 288
           +  + V    A   IP S+ +
Sbjct: 292 IVGAHVADYRATGRIPPSVDL 312


>4PU3-A nrPDB
          Length = 454

 Score = 29.6 bits (65), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 301 LQQRVKEVITKQAAVHRCNASVNLTPNGREPMP-PTVNNKDLYKQFKK 347
           LQ  +  ++T  A  H  N S  +TP+G EP P   + + D+Y+ F++
Sbjct: 314 LQWALFNLLTGNADAHGKNYSFFMTPSGMEPTPWYDLVSVDMYEDFEQ 361


>1BZS-A nrPDB
          Length = 165

 Score = 29.3 bits (64), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 1/84 (1%)

Query: 161 QGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGV 220
            G +   FQP + G+ G      E    N  A + + L A   FG +   A S   GA +
Sbjct: 79  NGILAHAFQPGQ-GIGGDAHFDAEETWTNTSANYNLFLVAAHEFGHSLGLAHSSDPGALM 137

Query: 221 FEAVITGKGGHAAIPQHTIDPVVA 244
           +      +  + ++PQ  ID + A
Sbjct: 138 YPNYAFRETSNYSLPQDDIDGIQA 161


>2RB7-A nrPDB
          Length = 364

 Score = 28.9 bits (63), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 15/60 (25%), Positives = 26/60 (43%)

Query: 225 ITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNAFNVIPD 284
            TGK  H A P   ++ V         L+ L + E +    + V + ++  G + N +PD
Sbjct: 184 CTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFAEENEDHWHRTVNLGRIRAGESTNKVPD 243


>5JLC-A nrPDB
          Length = 515

 Score = 28.5 bits (62), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query: 346 KKVVRDLLGQEAFVEAAPVMGSEDFSYFAET 376
           KK V+  L +EAFV   P++  E + YF  +
Sbjct: 133 KKFVKGALTKEAFVRYVPLIAEEIYKYFRNS 163


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

1XMB-A nrPDB                                                          664   0.0  
4O23-A nrPDB                                                          384   e-107
3IO1-A nrPDB                                                          318   3e-87

Sequences not found previously or not previously below threshold:

3ISZ-A nrPDB                                                          220   1e-57
4H2K-A nrPDB                                                           99   5e-21
4ONW-A nrPDB                                                           90   1e-18
3RZA-A nrPDB                                                           63   2e-10
1CG2-A nrPDB                                                           52   5e-07
2RB7-A nrPDB                                                           48   8e-06
3PFO-A nrPDB                                                           41   0.002
3CT9-A nrPDB                                                           41   0.002
3TX8-A nrPDB                                                           39   0.004
2QYV-A nrPDB                                                           38   0.008
3DLJ-A nrPDB                                                           36   0.036
5ZMY-A nrPDB                                                           36   0.046
3MY9-A nrPDB                                                           31   1.7  
2Y4R-A nrPDB                                                           30   2.3  

>1XMB-A nrPDB
          Length = 418

 Score =  664 bits (1713), Expect = 0.0,   Method: Composition-based stats.
 Identities = 418/418 (100%), Positives = 418/418 (100%)

Query: 22  SESPWIAEDTSQIQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELEL 81
           SESPWIAEDTSQIQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELEL
Sbjct: 1   SESPWIAEDTSQIQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELEL 60

Query: 82  IGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDG 141
           IGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDG
Sbjct: 61  IGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDG 120

Query: 142 HVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSAR 201
           HVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSAR
Sbjct: 121 HVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSAR 180

Query: 202 IPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETD 261
           IPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETD
Sbjct: 181 IPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETD 240

Query: 262 PLDSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFTGFTQLQQRVKEVITKQAAVHRCNAS 321
           PLDSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFTGFTQLQQRVKEVITKQAAVHRCNAS
Sbjct: 241 PLDSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFTGFTQLQQRVKEVITKQAAVHRCNAS 300

Query: 322 VNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPGHF 381
           VNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPGHF
Sbjct: 301 VNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPGHF 360

Query: 382 SLLGMQDETNGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEKASKGSVSGFHEEL 439
           SLLGMQDETNGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEKASKGSVSGFHEEL
Sbjct: 361 SLLGMQDETNGYASSHSPLYRINEDVLPYGAAIHASMAVQYLKEKASKGSVSGFHEEL 418


>4O23-A nrPDB
          Length = 384

 Score =  384 bits (987), Expect = e-107,   Method: Composition-based stats.
 Identities = 86/397 (21%), Positives = 147/397 (37%), Gaps = 64/397 (16%)

Query: 62  PELGYEELETSKLIRSELELIG-IKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQE 120
           P +  ++ +  KL+   L  IG          T  I      + P V      D +P   
Sbjct: 20  PSVTPDDRDCQKLLAERLHKIGFAAEELHFGDTKNIWLRRGTKAPVVCFAGHTDVVPTGP 79

Query: 121 GVEW--------EHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAE 172
             +W        E   ++ G+  A         +    + + +H +H QG++ L+    E
Sbjct: 80  VEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNH-QGSIALLITSDE 138

Query: 173 EG--LSGAKKMREEGALKNVEAIFGI--------HLSARIPFGKAASRAGSFLAGAGVFE 222
           EG  L G  K+ +    ++    + I         L   I  G+  S +G+         
Sbjct: 139 EGDALDGTTKVVDVLKARDELIDYCIVGEPTAVDKLGDMIKNGRRGSLSGNL-------- 190

Query: 223 AVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRE-TDPLDSKVVTVSKVNGGN-AFN 280
             + GK GH A P   I+PV   +  +L L Q V  E  +        +S +NGG  A N
Sbjct: 191 -TVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNINGGTGATN 249

Query: 281 VIPDSITIGGTLRAFTGFTQ--LQQRVKEVITKQAAVH----RCNASVNLTPNGREPMPP 334
           VIP  + +    R  T  T+  L+QRV  ++ K    +     C+    LT  G+     
Sbjct: 250 VIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPFLTQAGK----- 304

Query: 335 TVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDETNGYA 394
                        V R  + +   +EA       + S    T  G F +  +  E     
Sbjct: 305 ----------LTDVARAAIAETCGIEA-------ELSTTGGTSDGRF-IKAIAQELIELG 346

Query: 395 SSHSPLYRINEDV----LPYGAAIHASMAVQYLKEKA 427
            S++ +++INE+V    +P  +A++  +  + L   A
Sbjct: 347 PSNATIHQINENVRLNDIPKLSAVYEGILARLLAGNA 383


>3IO1-A nrPDB
          Length = 445

 Score =  318 bits (815), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 91/336 (27%), Positives = 146/336 (43%), Gaps = 37/336 (11%)

Query: 9   LTFQLLLFLLSVS-SESPWIAEDTSQIQTKLLEFAKSPEVFDWMVKI-------RRKIHE 60
           ++ QL  +L  ++ S + W  +     ++  LEF  + +V D +  +       R  I  
Sbjct: 1   MSLQLDEYLRQLAPSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDA 60

Query: 61  NPELGYEELETSKLIRSELELIGIKYRYPVAI----TGVIGYIGTGEP-PFVALRADMDA 115
           +  +G  + ET           G   R+  A      GV+  + TG P P +A R DMDA
Sbjct: 61  DSRMGLPDEETLARAFERAREQGAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDA 120

Query: 116 LPIQEGVEWEHK-------SKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIF 168
           L + E  +  H+       S  AG MHACGHDGH  + LG A +L ++   L G + LIF
Sbjct: 121 LDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGLAHVLKQYAAQLNGVIKLIF 180

Query: 169 QPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGK 228
           QPAEEG  GA+ M   G + +V+    IH+   +P G       +F+A    F+   +G 
Sbjct: 181 QPAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDNFMA-TTKFDVQFSGV 239

Query: 229 GGHA-AIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVN-----GGNAFNVI 282
             HA   P+   + ++AA+          +     +       S+VN      G   NV+
Sbjct: 240 AAHAGGKPEDGRNALLAAAQA--------ALGLHAIPPHSAGASRVNVGVMQAGTGRNVV 291

Query: 283 PDSITIGGTLRAFTGFTQ--LQQRVKEVITKQAAVH 316
           P S  +    R  +      + +R + V+   AA++
Sbjct: 292 PSSALLKVETRGESEAINQYVFERAQHVVAGAAAMY 327


>3ISZ-A nrPDB
          Length = 377

 Score =  220 bits (560), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 72/394 (18%), Positives = 136/394 (34%), Gaps = 66/394 (16%)

Query: 62  PELGYEELETSKLIRSELELIGIKYRYPV--AITGVIGYIGTGEPPFVALRADMDALPIQ 119
           P +   +    ++I   LE +G +  +        +    GT E P +A     D +P  
Sbjct: 16  PSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGTSE-PVIAFAGHTDVVPTG 74

Query: 120 EGVEWEH--------KSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPA 171
           +  +W             + G+  A        M++ A + +  + +H +GT+ L+    
Sbjct: 75  DENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNH-KGTIALLITSD 133

Query: 172 EEGL--SGAKKMREEGALKNVEAIFGI--------HLSARIPFGKAASRAGSFLAGAGVF 221
           EE     G   + E    ++ +  + +        +L   +  G+  S  G+        
Sbjct: 134 EEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRGSITGNLY------ 187

Query: 222 EAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRE-TDPLDSKVVTVSKVNGGNAF- 279
              I G  GH A P    +P+  A+  +  L      +  +      + ++ ++ G    
Sbjct: 188 ---IQGIQGHVAYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANIHAGTGSN 244

Query: 280 NVIPDSITIGGTLRAFTGFTQ--LQQRVKEVITKQAAVHRC----NASVNLTPNGREPMP 333
           NVIP  + I   LR  T  T   ++Q+V E++ K    +R     +    LT  G+    
Sbjct: 245 NVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLKYRIEWNLSGKPFLTKPGK---- 300

Query: 334 PTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDETNGY 393
                          +   + +   +      G         T  G F  L M  E   +
Sbjct: 301 -----------LLDSITSAIEETIGITPKAETG-------GGTSDGRFIAL-MGAEVVEF 341

Query: 394 ASSHSPLYRINEDV----LPYGAAIHASMAVQYL 423
              +S ++++NE V    L     I+  M V  L
Sbjct: 342 GPLNSTIHKVNECVSVEDLGKCGEIYHKMLVNLL 375


>4H2K-A nrPDB
          Length = 269

 Score = 98.7 bits (244), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 65/185 (35%), Gaps = 25/185 (13%)

Query: 62  PELGYEELETSKLIRSELELIGIKYRYPV--AITGVIGYIGTGEPPFVALRADMDALPIQ 119
           P +   +    ++I   LE +G +  +        +    GT E P +A     D +P  
Sbjct: 19  PSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGTSE-PVIAFAGHTDVVPTG 77

Query: 120 EGVEWEH--------KSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPA 171
           +  +W             + G+  A        M++ A + +  + +H +GT+ L+    
Sbjct: 78  DENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNH-KGTIALLITSD 136

Query: 172 EEGL--SGAKKMREEGALKNVEAIFGI--------HLSARIPFGKAASRAGSFLAGAGVF 221
           EE     G   + E    ++ +  + +        +L   +  G+     G FL   G  
Sbjct: 137 EEATAKDGTIHVVETLMARDEKITYCMVGEPSSAKNLGDVVKNGRRG---GGFLTKPGKL 193

Query: 222 EAVIT 226
              IT
Sbjct: 194 LDSIT 198



 Score = 43.2 bits (100), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 12/84 (14%)

Query: 344 QFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDETNGYASSHSPLYRI 403
           +    +   + +   +      G         T  G F  L M  E   +   +S ++++
Sbjct: 192 KLLDSITSAIEETIGITPKAETG-------GGTSDGRFIAL-MGAEVVEFGPLNSTIHKV 243

Query: 404 NEDV----LPYGAAIHASMAVQYL 423
           NE V    L     I+  M V  L
Sbjct: 244 NECVSVEDLGKCGEIYHKMLVNLL 267


>4ONW-A nrPDB
          Length = 268

 Score = 90.2 bits (222), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 44/135 (32%), Gaps = 22/135 (16%)

Query: 103 EPPFVALRADMDALPIQEGVEWEH--------KSKIAGKMHACGHDGHVTMLLGAAKILH 154
           + P        D +P     +W             + G+  A        M++   + + 
Sbjct: 61  QSPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIA 120

Query: 155 EHRHHLQGTVVLIFQPAEEG--LSGAKKMREEGALKNVEAIFGI--------HLSARIPF 204
           EH  H QG++  +    EEG  ++G  ++ E    +N      I         +   +  
Sbjct: 121 EHPDH-QGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKN 179

Query: 205 GKAASRAGSFLAGAG 219
           G+     G FL   G
Sbjct: 180 GRRG---GGFLTDTG 191



 Score = 40.9 bits (94), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 19/58 (32%), Gaps = 5/58 (8%)

Query: 370 FSYFAETIPGHFSLLGMQDETNGYASSHSPLYRINEDV----LPYGAAIHASMAVQYL 423
                 T  G F +  M  +       ++ ++++NE V    L     ++       L
Sbjct: 211 LLTTGGTSDGRF-IAQMGAQVVELGPVNATIHKVNECVRIADLEKLTDMYQKTLNHLL 267


>3RZA-A nrPDB
          Length = 396

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 65/338 (19%), Positives = 118/338 (34%), Gaps = 41/338 (12%)

Query: 97  GYIGTGEPPFVALRADMD----ALPIQEGVEWEHKSKIAGKMH----ACGHDGHVTMLLG 148
             I  GE P + L + MD    A+ ++  V+      I         A    G   ML  
Sbjct: 83  STIEEGEVPKLYLTSHMDTVVPAINVKPIVKD--DGYIYSDGTTILGADDKAGLAAMLEV 140

Query: 149 AAKILHEHRHHLQGTVVLIFQPAEE-GLSGAKKMREEGALKNVEAIFGIHLSARIPFGKA 207
              I  +   H  G +  +    EE GL GAK++  E     ++A FG  + A    G  
Sbjct: 141 LQVIKEQQIPH--GQIQFVITVGEESGLIGAKELNSEL----LDADFGYAIDASADVGTT 194

Query: 208 ASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKV 267
              A + +  +      I GK  HA+ P+  +  +  A+  +  ++     E        
Sbjct: 195 VVGAPTQMLISAK----IIGKTAHASTPKEGVSAINIAAKAISRMKLGQVDEI-----TT 245

Query: 268 VTVSKVNGGNAFNVIPDSITIGGTLRAFTGFTQLQQRVKEVITKQAAVHRCNASVNLTPN 327
             + K +GG+A N++ D + +    R      +++ +VK +             V  T  
Sbjct: 246 ANIGKFHGGSATNIVADEVILEAEAR-SHDPERIKTQVKHMTD-----------VFETTA 293

Query: 328 GREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPGH-FSLLGM 386
                   V  +  Y  FK    + + + A   A  +  S +         G   +  G+
Sbjct: 294 SELGGKAEVTVEQSYPGFKINDNEAVVKIAQESARNLGLSANTIISGGGSDGSIINTFGI 353

Query: 387 QDETNGYASSHSPLYRINEDVLPYGAAIHASMAVQYLK 424
                G    +  ++  NE +      + AS  ++ +K
Sbjct: 354 PSVILGVG--YEKIHTTNERMPIKSLNLLASQVLEIIK 389


>1CG2-A nrPDB
          Length = 393

 Score = 52.1 bits (123), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 13/168 (7%)

Query: 129 KIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEE-GLSGAKKMREEGAL 187
           K  G   A    G+  +L    K+L E+     GT+ ++F   EE G  G++ + +E A 
Sbjct: 111 KAYGPGIADDKGGNAVILHTL-KLLKEYGVRDYGTITVLFNTDEEKGSFGSRDLIQEEA- 168

Query: 188 KNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHA-AIPQHTIDPVVAAS 246
               A + +         +  S   S   G    +  ITGK  HA A P+  ++ +V AS
Sbjct: 169 --KLADYVLSFEPTSAGDEKLSLGTS---GIAYVQVNITGKASHAGAAPELGVNALVEAS 223

Query: 247 SIVLSLQQLVSRETDPLDSKVVTVSKVNGGNAFNVIPDSITIGGTLRA 294
            +VL    +     D   +     +    GN  N+IP S T+   +R 
Sbjct: 224 DLVLRTMNI----DDKAKNLRFNWTIAKAGNVSNIIPASATLNADVRY 267


>2RB7-A nrPDB
          Length = 364

 Score = 47.8 bits (112), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 66/195 (33%), Gaps = 18/195 (9%)

Query: 107 VALRADMDALPIQEG--VEWEHKSKIAGKMHACGHD----GHVTMLLGAAKILHEHRHHL 160
           + L A +D +  ++   V      ++ G+           G V        +    R   
Sbjct: 68  LLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQK 127

Query: 161 QGTVVLIFQPAEE--GLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGA 218
              + L+    EE  G++GA K     AL  + A + + L    P        G      
Sbjct: 128 DMALGLLITGDEEIGGMNGAAK-----ALPLIRADYVVALDGGNPQQVITKEKG-----I 177

Query: 219 GVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNA 278
              +   TGK  H A P   ++ V         L+ L + E +    + V + ++  G +
Sbjct: 178 IDIKLTCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFAEENEDHWHRTVNLGRIRAGES 237

Query: 279 FNVIPDSITIGGTLR 293
            N +PD       +R
Sbjct: 238 TNKVPDVAEGWFNIR 252


>3PFO-A nrPDB
          Length = 433

 Score = 40.5 bits (93), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 59/208 (28%), Gaps = 29/208 (13%)

Query: 89  PVAITGVIGYIGT-GEPPFVALRADMDALPIQEGVEWE--------HKSKIAGKMHACGH 139
           P     V+    + G+   + L+  +D +P      W             + G+      
Sbjct: 87  PAGSMQVVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMK 146

Query: 140 DGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLS 199
            G   M+     I            V      E   +GA      G   +   I      
Sbjct: 147 GGVSAMIFALDAIRTAGYAPDARVHVQTVTEEESTGNGALSTLMRGYRADACLIPE---- 202

Query: 200 ARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRE 259
              P G   +RA     GA  F   + G   H A  +     +++A  ++ + ++     
Sbjct: 203 ---PTGHTLTRA---QVGAVWFRLRVRGTPVHVAYSETGTSAILSAMHLIRAFEEYTKEL 256

Query: 260 T-----DPL-----DSKVVTVSKVNGGN 277
                 DP      +     V  + GG+
Sbjct: 257 NAQAVRDPWFGQVKNPIKFNVGIIKGGD 284


>3CT9-A nrPDB
          Length = 356

 Score = 40.5 bits (93), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 83/265 (31%), Gaps = 30/265 (11%)

Query: 103 EPPFVALRADMDAL-PIQEGVEW-----EHKSKIAGKMHACGHDGHVTMLLGAAKILHEH 156
           + P + L + +D + P+    +      E   K+ G          V++L    ++  + 
Sbjct: 65  KKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSNDAGASVVSLL----QVFLQL 120

Query: 157 RHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLA 216
               Q   ++     EE +SG + +          +   +      P     + A     
Sbjct: 121 CRTSQNYNLIYLASCEEEVSGKEGIESVLPGLPPVSFAIV----GEPTEMQPAIAEK--- 173

Query: 217 GAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGG 276
           G  V +   TGK GHAA  +         + I         +E+  L    ++V+ +N G
Sbjct: 174 GLMVLDVTATGKAGHAARDEGDNAIYKVLNDIAWFRDYRFEKESPLLGPVKMSVTVINAG 233

Query: 277 NAFNVIPDS----ITIGGTLRAFTGFTQLQQRVKEVITKQAAVHRCNAS------VNLTP 326
              NV+PD     + I             + R       +A   R N+S        +  
Sbjct: 234 TQHNVVPDKCTFVVDIRSNELYSNEDLFAEIRKHIACDAKARSFRLNSSRIDEKHPFVQK 293

Query: 327 N---GREPMPPTVNNKDLYKQFKKV 348
               GR P      +      F  V
Sbjct: 294 AVKMGRIPFGSPTLSDQALMSFASV 318


>3TX8-A nrPDB
          Length = 369

 Score = 39.0 bits (89), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 63/211 (29%), Gaps = 24/211 (11%)

Query: 95  VIGYIGTGEPPFVALRADMDALPIQEGVEWE-HKSKIAGKMHACGHDGHVTMLLGAAKIL 153
           V+     G    V L   +D +PI + +        + G        G    L   A + 
Sbjct: 60  VLARTNRGLASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLA 119

Query: 154 HEHRHHLQGTVVLIFQPAEE---GLSGAKKMREE----GALKNVEAIFGIHLSARIPFGK 206
                 L+  + LI    EE    L+G   +R+E     A     A+ G      I  G 
Sbjct: 120 T--STELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAAD--LALLGEPTGGWIEAGC 175

Query: 207 AASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSK 266
             +            +    G   H+A      + +   S I+  +    + E +     
Sbjct: 176 QGNL---------RIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAEVNIDGLT 226

Query: 267 VVTVSKV---NGGNAFNVIPDSITIGGTLRA 294
                 +     G A NVIPD   +    R 
Sbjct: 227 YREGLNIVFCESGVANNVIPDLAWMNLNFRF 257


>2QYV-A nrPDB
          Length = 487

 Score = 38.2 bits (87), Expect = 0.008,   Method: Composition-based stats.
 Identities = 55/287 (19%), Positives = 93/287 (32%), Gaps = 49/287 (17%)

Query: 56  RKIHENPELGYEELETSKLI---------RSELELIGIKYRYPVAITGVIGYIGTGEPPF 106
            +I   P   Y+E + ++ I          +E + +G       A  G+         P 
Sbjct: 18  DQICAIPHPSYKEEQLAQFIINWAKTKGFFAERDEVGNVLIRKPATVGM-----ENRKPV 72

Query: 107 VALRADMDALPI---QEGVEWEHKSKI--------AGKMHACGHDGHVTMLLGAAKILHE 155
           V L+A +D +P         ++    +          K    G D  + M    A +   
Sbjct: 73  V-LQAHLDMVPQANEGTNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLESN 131

Query: 156 HRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFL 215
              H +  V+L     E G+ GA  +R       +        +  I  G A        
Sbjct: 132 DIAHPELEVLLTMT-EERGMEGAIGLRPNWLRSEILINTDTEENGEIYIGCAGGENADLE 190

Query: 216 AGAGV--------FEAVITG-KGGHAAIPQHT--IDPVVAASSIVLSLQQLVSRETDP-L 263
                        ++ V+ G +GGH+ +  HT   + +      +  LQQ       P  
Sbjct: 191 LPIEYQVNNFEHCYQVVLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQQ-----NQPHF 245

Query: 264 DSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFTGFTQLQQRVKEVIT 310
           D    T++ + GG+  N IP       TL      T LQ  V++   
Sbjct: 246 D---FTLANIRGGSIRNAIPRESVA--TLVFNGDITVLQSAVQKFAD 287


>3DLJ-A nrPDB
          Length = 485

 Score = 35.9 bits (81), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 37/128 (28%), Gaps = 22/128 (17%)

Query: 106 FVALRADMDALPIQEGVEW--------EHKSKIAGKMHACGHDGHVTMLLGAAKILHEHR 157
            V     +D  P   G  W        E   K+ G+         +  +   +      +
Sbjct: 104 TVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQ 163

Query: 158 HHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFG----------IHLSARIPFGKA 207
             L   +  I +  EE  S A    EE   K  +  F           + +S R P    
Sbjct: 164 D-LPVNIKFIIEGMEEAGSVA---LEELVEKEKDRFFSGVDYIVISDNLWISQRKPAITY 219

Query: 208 ASRAGSFL 215
            +R  S+ 
Sbjct: 220 GTRGNSYF 227


>5ZMY-A nrPDB
          Length = 314

 Score = 35.5 bits (80), Expect = 0.046,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 41/120 (34%), Gaps = 20/120 (16%)

Query: 33  QIQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAI 92
               +L E    P    W V   R +    ++G  +      +  EL   GI+  +P  I
Sbjct: 167 HFSKRLRELGVKPAFIAWTVPFTRTLDAFMDMGLVDDP--AYLLFELTDCGIRGGHPGTI 224

Query: 93  TGVIGYIGTGEPPFVALRADMDALPIQEGVEW---EHKSKIAGKMHACGHD-GHVTMLLG 148
            G              LRA  D LP    ++W        + G   A   + GHV + LG
Sbjct: 225 RG--------------LRAHTDFLPPGRQIQWTVCNKIGNLFGPAAAAIEEGGHVAIGLG 270


>3MY9-A nrPDB
          Length = 377

 Score = 30.5 bits (67), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 81  LIGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQEGVEWEHKSKIAGKMHACG 138
              +  R+  A+ G    + T   P +A  +  DA+ + E V  +    I+ K+  CG
Sbjct: 223 EQPVPRRHLDAMAGFAAALDT---PILADESCFDAVDLMEVVRRQAADAISVKIMKCG 277


>2Y4R-A nrPDB
          Length = 292

 Score = 29.7 bits (65), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 30/97 (30%), Gaps = 14/97 (14%)

Query: 107 VALRADM-DALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVV 165
           +  +  M D +  +   E   + +  G  +  G    + +  G  ++L  H   L     
Sbjct: 16  LYFQGHMLDWVDGRPAAELSVRDR--GLAYGDGLFETLAVRAGTPRLLERHLARL----- 68

Query: 166 LIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARI 202
                 EEG        +  AL+     F   L   +
Sbjct: 69  ------EEGCRRLAIPLDTAALRQELLAFCAALGDGV 99


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.312    0.126    0.320 

Lambda     K      H
   0.267   0.0373    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,497,566
Number of Sequences: 36641
Number of extensions: 555802
Number of successful extensions: 2140
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 2085
Number of HSP's gapped (non-prelim): 45
length of query: 439
length of database: 10,336,785
effective HSP length: 100
effective length of query: 339
effective length of database: 6,672,685
effective search space: 2262040215
effective search space used: 2262040215
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 60 (27.9 bits)