BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P54802 (743 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4XWH-A nrPDB 1474 0.0 5A6B-D nrPDB 35 0.18 4NUY-A nrPDB 32 1.5 5X9W-A nrPDB 31 1.6 2ZBW-A nrPDB 30 5.0 3NTT-A nrPDB 30 5.2 5B57-C nrPDB 29 6.0 5M85-A nrPDB 29 6.2 2PAR-A nrPDB 29 6.4 >4XWH-A nrPDB Length = 720 Score = 1474 bits (3815), Expect = 0.0, Method: Compositional matrix adjust. Identities = 720/720 (100%), Positives = 720/720 (100%) Query: 24 DEAREAAAVRALVARLLGPGPAADFSVSVERALAAKPGLDTYSLGGGGAARVRVRGSTGV 83 DEAREAAAVRALVARLLGPGPAADFSVSVERALAAKPGLDTYSLGGGGAARVRVRGSTGV Sbjct: 1 DEAREAAAVRALVARLLGPGPAADFSVSVERALAAKPGLDTYSLGGGGAARVRVRGSTGV 60 Query: 84 AAAAGLHRYLRDFCGCHVAWSGSQLRLPRPLPAVPGELTEATPNRYRYYQNVCTQSYSFV 143 AAAAGLHRYLRDFCGCHVAWSGSQLRLPRPLPAVPGELTEATPNRYRYYQNVCTQSYSFV Sbjct: 61 AAAAGLHRYLRDFCGCHVAWSGSQLRLPRPLPAVPGELTEATPNRYRYYQNVCTQSYSFV 120 Query: 144 WWDWARWEREIDWMALNGINLALAWSGQEAIWQRVYLALGLTQAEINEFFTGPAFLAWGR 203 WWDWARWEREIDWMALNGINLALAWSGQEAIWQRVYLALGLTQAEINEFFTGPAFLAWGR Sbjct: 121 WWDWARWEREIDWMALNGINLALAWSGQEAIWQRVYLALGLTQAEINEFFTGPAFLAWGR 180 Query: 204 MGNLHTWDGPLPPSWHIKQLYLQHRVLDQMRSFGMTPVLPAFAGHVPEAVTRVFPQVNVT 263 MGNLHTWDGPLPPSWHIKQLYLQHRVLDQMRSFGMTPVLPAFAGHVPEAVTRVFPQVNVT Sbjct: 181 MGNLHTWDGPLPPSWHIKQLYLQHRVLDQMRSFGMTPVLPAFAGHVPEAVTRVFPQVNVT 240 Query: 264 KMGSWGHFNCSYSCSFLLAPEDPIFPIIGSLFLRELIKEFGTDHIYGADTFNEMQPPSSE 323 KMGSWGHFNCSYSCSFLLAPEDPIFPIIGSLFLRELIKEFGTDHIYGADTFNEMQPPSSE Sbjct: 241 KMGSWGHFNCSYSCSFLLAPEDPIFPIIGSLFLRELIKEFGTDHIYGADTFNEMQPPSSE 300 Query: 324 PSYLAAATTAVYEAMTAVDTEAVWLLQGWLFQHQPQFWGPAQIRAVLGAVPRGRLLVLDL 383 PSYLAAATTAVYEAMTAVDTEAVWLLQGWLFQHQPQFWGPAQIRAVLGAVPRGRLLVLDL Sbjct: 301 PSYLAAATTAVYEAMTAVDTEAVWLLQGWLFQHQPQFWGPAQIRAVLGAVPRGRLLVLDL 360 Query: 384 FAESQPVYTRTASFQGQPFIWCMLHNFGGNHGLFGALEAVNGGPEAARLFPNSTMVGTGM 443 FAESQPVYTRTASFQGQPFIWCMLHNFGGNHGLFGALEAVNGGPEAARLFPNSTMVGTGM Sbjct: 361 FAESQPVYTRTASFQGQPFIWCMLHNFGGNHGLFGALEAVNGGPEAARLFPNSTMVGTGM 420 Query: 444 APEGISQNEVVYSLMAELGWRKDPVPDLAAWVTSFAARRYGVSHPDAGAAWRLLLRSVYN 503 APEGISQNEVVYSLMAELGWRKDPVPDLAAWVTSFAARRYGVSHPDAGAAWRLLLRSVYN Sbjct: 421 APEGISQNEVVYSLMAELGWRKDPVPDLAAWVTSFAARRYGVSHPDAGAAWRLLLRSVYN 480 Query: 504 CSGEACRGHNRSPLVRRPSLQMNTSIWYNRSDVFEAWRLLLTSAPSLATSPAFRYDLLDL 563 CSGEACRGHNRSPLVRRPSLQMNTSIWYNRSDVFEAWRLLLTSAPSLATSPAFRYDLLDL Sbjct: 481 CSGEACRGHNRSPLVRRPSLQMNTSIWYNRSDVFEAWRLLLTSAPSLATSPAFRYDLLDL 540 Query: 564 TRQAVQELVSLYYEEARSAYLSKELASLLRAGGVLAYELLPALDEVLASDSRFLLGSWLE 623 TRQAVQELVSLYYEEARSAYLSKELASLLRAGGVLAYELLPALDEVLASDSRFLLGSWLE Sbjct: 541 TRQAVQELVSLYYEEARSAYLSKELASLLRAGGVLAYELLPALDEVLASDSRFLLGSWLE 600 Query: 624 QARAAAVSEAEADFYEQNSRYQLTLWGPEGNILDYANKQLAGLVANYYTPRWRLFLEALV 683 QARAAAVSEAEADFYEQNSRYQLTLWGPEGNILDYANKQLAGLVANYYTPRWRLFLEALV Sbjct: 601 QARAAAVSEAEADFYEQNSRYQLTLWGPEGNILDYANKQLAGLVANYYTPRWRLFLEALV 660 Query: 684 DSVAQGIPFQQHQFDKNVFQLEQAFVLSKQRYPSQPRGDTVDLAKKIFLKYYPRWVAGSW 743 DSVAQGIPFQQHQFDKNVFQLEQAFVLSKQRYPSQPRGDTVDLAKKIFLKYYPRWVAGSW Sbjct: 661 DSVAQGIPFQQHQFDKNVFQLEQAFVLSKQRYPSQPRGDTVDLAKKIFLKYYPRWVAGSW 720 >5A6B-D nrPDB Length = 648 Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust. Identities = 13/29 (44%), Positives = 19/29 (65%) Query: 107 QLRLPRPLPAVPGELTEATPNRYRYYQNV 135 Q+ L LP +PG L+ PNRY +YQ++ Sbjct: 443 QIDLANLLPDLPGNLSGINPNRYVFYQDI 471 >4NUY-A nrPDB Length = 899 Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/223 (20%), Positives = 81/223 (36%), Gaps = 38/223 (17%) Query: 353 LFQHQPQFWGPAQIRAVLGAVPRGRLLVLD--LFAESQPVYTRTASFQGQPFIWCMLHNF 410 +F+ + GP V + RL ++D A+ P+ R G P+I +L Sbjct: 160 VFEEIGKLIGPK-------GVDKSRLFIMDSTYMADKNPLIER-----GAPYINLLLVQV 207 Query: 411 GGNHGLFGALEAVNGGPE----------AARLFPNSTMVGTGMAPEGISQNEVVYSLMAE 460 G+ G G E V+ PE + + P M+G E + + Y + + Sbjct: 208 YGSQGEKGGWEPVSNRPEKTMEERWQGYSKYIRPEQYMIGFSFYEENAQEGNLWYDINSR 267 Query: 461 LGWRKDPVPDLAAWVTSFAARRYGVSHPDAGAAWRLLLRSVYNCSGEACRGHNRSPLVRR 520 +D + +T A RY P G + + G A H ++ Sbjct: 268 KD--EDKANGINTDITGTRAERYARWQPKTGGVKGGIFSYAIDRDGVA---HQPKKYAKQ 322 Query: 521 PSLQMNT-SIWYNRSDVFEAWRLLLTSAPSLATSPAFRYDLLD 562 + T +I+++ V +A + ++ S YDL+D Sbjct: 323 KEFKDATDNIFHSDYSVSKALKTVMLKDKS--------YDLID 357 >5X9W-A nrPDB Length = 816 Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust. Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 4/121 (3%) Query: 592 LRAGGVLAYELLPALDE---VLASDSRFLLGSWLEQARAAAVSEAEADFYEQNSRY-QLT 647 L+ G V+ + P LDE + FLL ++ +S + +F + Y +L+ Sbjct: 415 LKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERERTGLSTLKVEFNRVHGFYIELS 474 Query: 648 LWGPEGNILDYANKQLAGLVANYYTPRWRLFLEALVDSVAQGIPFQQHQFDKNVFQLEQA 707 E DY +Q + TP + F + ++ + Q + ++ FD + L A Sbjct: 475 KTQAEQAPADYQRRQTLKNAERFITPELKAFEDKVLTAQDQALALEKQLFDGVLKNLRTA 534 Query: 708 F 708 Sbjct: 535 L 535 >2ZBW-A nrPDB Length = 335 Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust. Identities = 14/36 (38%), Positives = 17/36 (47%) Query: 96 FCGCHVAWSGSQLRLPRPLPAVPGELTEATPNRYRY 131 F G +V G R PLP G+LT P +Y Y Sbjct: 19 FAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIY 54 >3NTT-A nrPDB Length = 724 Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 7/66 (10%) Query: 43 GPAADFSVSVERALAAKPGLDTYSLGGGGAARVRVRGSTGVAAAAGLHRYLRDFCGCHVA 102 GP+ + + A+ G DT S GGGG +G+ GV A+G C Sbjct: 171 GPSGSQQLQIPAQPASSLGADTMSAGGGGPLGDNNQGADGVGNASGDWH-------CDST 223 Query: 103 WSGSQL 108 W G ++ Sbjct: 224 WMGDRV 229 >5B57-C nrPDB Length = 273 Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 7/127 (5%) Query: 480 ARRYG-VSHPDAGAAWRLLLRSVYNC-SGEACRGHNRSPLVRRPSLQMNTSIWYNRSDVF 537 ARR G SH D AWR L R+ + G + L R ++ +W + Sbjct: 112 ARRSGATSHRDRDIAWRALERAGADALVGRDVTTLSGGELARVQFARVLAQLWPDHDTTE 171 Query: 538 EAWRLLLTSAPSLATSPAFRYDLLDLTRQAVQE----LVSLYYEEARSAYLSKELASLLR 593 R LL P+ A A ++ LLD R +E ++++ ++ +A + +A +L Sbjct: 172 PGPRYLLLDEPTAALDLAHQHRLLDTVRAVAREWQLGVLAIVHDPNLAARHADAIA-MLA 230 Query: 594 AGGVLAY 600 G ++A+ Sbjct: 231 DGTIVAH 237 >5M85-A nrPDB Length = 215 Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust. Identities = 14/51 (27%), Positives = 25/51 (49%) Query: 183 GLTQAEINEFFTGPAFLAWGRMGNLHTWDGPLPPSWHIKQLYLQHRVLDQM 233 L + EI F T P F+ G L + P W ++++L H++ +Q+ Sbjct: 142 NLRRFEIRAFLTVPVFVGEQLWGLLGAYQNGAPRHWQAREIHLLHQIANQL 192 >2PAR-A nrPDB Length = 201 Score = 29.3 bits (64), Expect = 6.4, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 11/81 (13%) Query: 567 AVQELVSLYYEEARS---------AYLSKELASLLRAGGVLAYELLPALDEVLASDSRFL 617 A Q+LV + EE R AY +E + + +A + AY L L+E+ A ++ FL Sbjct: 102 AQQKLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAY--LKCLEELAAGNNEFL 159 Query: 618 LGSWLEQARAAAVSEAEADFY 638 L +A A E D++ Sbjct: 160 LAKTRLEATLEARRSQEMDYF 180 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4XWH-A nrPDB 1523 0.0 Sequences not found previously or not previously below threshold: 5A6B-D nrPDB 34 0.24 5M85-A nrPDB 32 1.1 5B57-C nrPDB 32 1.1 4IIL-A nrPDB 32 1.5 4NUY-A nrPDB 31 1.9 6EIW-B nrPDB 31 2.1 6EGV-B nrPDB 31 2.1 5X9W-A nrPDB 31 2.1 2ZBW-A nrPDB 30 2.9 3NTT-A nrPDB 30 3.0 1DKL-A nrPDB 30 3.3 4YCZ-A nrPDB 30 4.3 4TM8-A nrPDB 29 5.8 2PAR-A nrPDB 29 6.6 CONVERGED! >4XWH-A nrPDB Length = 720 Score = 1523 bits (3943), Expect = 0.0, Method: Composition-based stats. Identities = 720/720 (100%), Positives = 720/720 (100%) Query: 24 DEAREAAAVRALVARLLGPGPAADFSVSVERALAAKPGLDTYSLGGGGAARVRVRGSTGV 83 DEAREAAAVRALVARLLGPGPAADFSVSVERALAAKPGLDTYSLGGGGAARVRVRGSTGV Sbjct: 1 DEAREAAAVRALVARLLGPGPAADFSVSVERALAAKPGLDTYSLGGGGAARVRVRGSTGV 60 Query: 84 AAAAGLHRYLRDFCGCHVAWSGSQLRLPRPLPAVPGELTEATPNRYRYYQNVCTQSYSFV 143 AAAAGLHRYLRDFCGCHVAWSGSQLRLPRPLPAVPGELTEATPNRYRYYQNVCTQSYSFV Sbjct: 61 AAAAGLHRYLRDFCGCHVAWSGSQLRLPRPLPAVPGELTEATPNRYRYYQNVCTQSYSFV 120 Query: 144 WWDWARWEREIDWMALNGINLALAWSGQEAIWQRVYLALGLTQAEINEFFTGPAFLAWGR 203 WWDWARWEREIDWMALNGINLALAWSGQEAIWQRVYLALGLTQAEINEFFTGPAFLAWGR Sbjct: 121 WWDWARWEREIDWMALNGINLALAWSGQEAIWQRVYLALGLTQAEINEFFTGPAFLAWGR 180 Query: 204 MGNLHTWDGPLPPSWHIKQLYLQHRVLDQMRSFGMTPVLPAFAGHVPEAVTRVFPQVNVT 263 MGNLHTWDGPLPPSWHIKQLYLQHRVLDQMRSFGMTPVLPAFAGHVPEAVTRVFPQVNVT Sbjct: 181 MGNLHTWDGPLPPSWHIKQLYLQHRVLDQMRSFGMTPVLPAFAGHVPEAVTRVFPQVNVT 240 Query: 264 KMGSWGHFNCSYSCSFLLAPEDPIFPIIGSLFLRELIKEFGTDHIYGADTFNEMQPPSSE 323 KMGSWGHFNCSYSCSFLLAPEDPIFPIIGSLFLRELIKEFGTDHIYGADTFNEMQPPSSE Sbjct: 241 KMGSWGHFNCSYSCSFLLAPEDPIFPIIGSLFLRELIKEFGTDHIYGADTFNEMQPPSSE 300 Query: 324 PSYLAAATTAVYEAMTAVDTEAVWLLQGWLFQHQPQFWGPAQIRAVLGAVPRGRLLVLDL 383 PSYLAAATTAVYEAMTAVDTEAVWLLQGWLFQHQPQFWGPAQIRAVLGAVPRGRLLVLDL Sbjct: 301 PSYLAAATTAVYEAMTAVDTEAVWLLQGWLFQHQPQFWGPAQIRAVLGAVPRGRLLVLDL 360 Query: 384 FAESQPVYTRTASFQGQPFIWCMLHNFGGNHGLFGALEAVNGGPEAARLFPNSTMVGTGM 443 FAESQPVYTRTASFQGQPFIWCMLHNFGGNHGLFGALEAVNGGPEAARLFPNSTMVGTGM Sbjct: 361 FAESQPVYTRTASFQGQPFIWCMLHNFGGNHGLFGALEAVNGGPEAARLFPNSTMVGTGM 420 Query: 444 APEGISQNEVVYSLMAELGWRKDPVPDLAAWVTSFAARRYGVSHPDAGAAWRLLLRSVYN 503 APEGISQNEVVYSLMAELGWRKDPVPDLAAWVTSFAARRYGVSHPDAGAAWRLLLRSVYN Sbjct: 421 APEGISQNEVVYSLMAELGWRKDPVPDLAAWVTSFAARRYGVSHPDAGAAWRLLLRSVYN 480 Query: 504 CSGEACRGHNRSPLVRRPSLQMNTSIWYNRSDVFEAWRLLLTSAPSLATSPAFRYDLLDL 563 CSGEACRGHNRSPLVRRPSLQMNTSIWYNRSDVFEAWRLLLTSAPSLATSPAFRYDLLDL Sbjct: 481 CSGEACRGHNRSPLVRRPSLQMNTSIWYNRSDVFEAWRLLLTSAPSLATSPAFRYDLLDL 540 Query: 564 TRQAVQELVSLYYEEARSAYLSKELASLLRAGGVLAYELLPALDEVLASDSRFLLGSWLE 623 TRQAVQELVSLYYEEARSAYLSKELASLLRAGGVLAYELLPALDEVLASDSRFLLGSWLE Sbjct: 541 TRQAVQELVSLYYEEARSAYLSKELASLLRAGGVLAYELLPALDEVLASDSRFLLGSWLE 600 Query: 624 QARAAAVSEAEADFYEQNSRYQLTLWGPEGNILDYANKQLAGLVANYYTPRWRLFLEALV 683 QARAAAVSEAEADFYEQNSRYQLTLWGPEGNILDYANKQLAGLVANYYTPRWRLFLEALV Sbjct: 601 QARAAAVSEAEADFYEQNSRYQLTLWGPEGNILDYANKQLAGLVANYYTPRWRLFLEALV 660 Query: 684 DSVAQGIPFQQHQFDKNVFQLEQAFVLSKQRYPSQPRGDTVDLAKKIFLKYYPRWVAGSW 743 DSVAQGIPFQQHQFDKNVFQLEQAFVLSKQRYPSQPRGDTVDLAKKIFLKYYPRWVAGSW Sbjct: 661 DSVAQGIPFQQHQFDKNVFQLEQAFVLSKQRYPSQPRGDTVDLAKKIFLKYYPRWVAGSW 720 >5A6B-D nrPDB Length = 648 Score = 33.9 bits (76), Expect = 0.24, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 19/29 (65%) Query: 107 QLRLPRPLPAVPGELTEATPNRYRYYQNV 135 Q+ L LP +PG L+ PNRY +YQ++ Sbjct: 443 QIDLANLLPDLPGNLSGINPNRYVFYQDI 471 >5M85-A nrPDB Length = 215 Score = 31.9 bits (71), Expect = 1.1, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%) Query: 184 LTQAEINEFFTGPAFLAWGRMGNLHTWDGPLPPSWHIKQLYLQHRVLDQM 233 L + EI F T P F+ G L + P W ++++L H++ +Q+ Sbjct: 143 LRRFEIRAFLTVPVFVGEQLWGLLGAYQNGAPRHWQAREIHLLHQIANQL 192 >5B57-C nrPDB Length = 273 Score = 31.9 bits (71), Expect = 1.1, Method: Composition-based stats. Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 2/93 (2%) Query: 480 ARRYG-VSHPDAGAAWRLLLRSVYNC-SGEACRGHNRSPLVRRPSLQMNTSIWYNRSDVF 537 ARR G SH D AWR L R+ + G + L R ++ +W + Sbjct: 112 ARRSGATSHRDRDIAWRALERAGADALVGRDVTTLSGGELARVQFARVLAQLWPDHDTTE 171 Query: 538 EAWRLLLTSAPSLATSPAFRYDLLDLTRQAVQE 570 R LL P+ A A ++ LLD R +E Sbjct: 172 PGPRYLLLDEPTAALDLAHQHRLLDTVRAVARE 204 >4IIL-A nrPDB Length = 346 Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 61/142 (42%), Gaps = 36/142 (25%) Query: 526 NTSIWYNRSDVFEA---WRLLLTSAPSLA--------TSPAFRYDLLDLTRQAVQELVSL 574 N ++W + A +RL+++S P+L P R+ +LD L++ Sbjct: 80 NQALWREKLAHLAAEQRYRLIVSSNPALPHVLEPILRQFPLQRFLVLDAYAPQEHSLITF 139 Query: 575 YYEEARSAYLSKELASLLRAG-----------GVLAYELLPALDEVL---------ASDS 614 Y + AYL+ L++L+ A G++A + P + + + A D Sbjct: 140 RYNQWEQAYLAGHLSALVSASAMRFANADKKIGLIAGQSYPVMTQTIIPAFLAGARAVDP 199 Query: 615 RF-----LLGSWLEQARAAAVS 631 F ++G+W + A++A ++ Sbjct: 200 AFEVDVRVVGNWYDAAKSADLA 221 >4NUY-A nrPDB Length = 899 Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 49/133 (36%), Gaps = 19/133 (14%) Query: 372 AVPRGRLLVLD--LFAESQPVYTRTASFQGQPFIWCMLHNFGGNHGLFGALEAVNGGPE- 428 V + RL ++D A+ P+ R G P+I +L G+ G G E V+ PE Sbjct: 172 GVDKSRLFIMDSTYMADKNPLIER-----GAPYINLLLVQVYGSQGEKGGWEPVSNRPEK 226 Query: 429 ---------AARLFPNSTMVGTGMAPEGISQNEVVYSLMAELGWRKDPVPDLAAWVTSFA 479 + + P M+G E + + Y + + +D + +T Sbjct: 227 TMEERWQGYSKYIRPEQYMIGFSFYEENAQEGNLWYDINSRKD--EDKANGINTDITGTR 284 Query: 480 ARRYGVSHPDAGA 492 A RY P G Sbjct: 285 AERYARWQPKTGG 297 >6EIW-B nrPDB Length = 199 Score = 30.8 bits (68), Expect = 2.1, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 9/87 (10%) Query: 629 AVSEAEADFYEQNSRYQLTLWGPEGNILDYANKQLAGLVANYYTPRWRLFLEALVDSVAQ 688 A SE F +R W P +I N + L+A YY P FL Sbjct: 6 ASSEPTQQFRSLTNR-----WMPINSIRVTVNGKRNDLLAQYYIP--EDFLSTHAKCAPN 58 Query: 689 GIPFQQHQFDKNVFQLEQAFVLSKQRY 715 IPF+ + + K ++LE FV + ++ Sbjct: 59 TIPFETYVYGK--YELEMKFVANGNKF 83 >6EGV-B nrPDB Length = 239 Score = 30.8 bits (68), Expect = 2.1, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 9/87 (10%) Query: 629 AVSEAEADFYEQNSRYQLTLWGPEGNILDYANKQLAGLVANYYTPRWRLFLEALVDSVAQ 688 A SE F +R W P +I N + L+A YY P FL Sbjct: 46 ASSEPTQQFRSLTNR-----WMPINSIRVTVNGKRNDLLAQYYIP--EDFLSTHAKCAPN 98 Query: 689 GIPFQQHQFDKNVFQLEQAFVLSKQRY 715 IPF+ + + K ++LE FV + ++ Sbjct: 99 TIPFETYVYGK--YELEMKFVANGNKF 123 >5X9W-A nrPDB Length = 816 Score = 30.8 bits (68), Expect = 2.1, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 4/140 (2%) Query: 573 SLYYEEARSAYLSKELASLLRAGGVLAYELLPALDE---VLASDSRFLLGSWLEQARAAA 629 +L E A + E + L+ G V+ + P LDE + FLL ++ Sbjct: 396 TLPVAETLKAAVMPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERERTG 455 Query: 630 VSEAEADFYEQNSRY-QLTLWGPEGNILDYANKQLAGLVANYYTPRWRLFLEALVDSVAQ 688 +S + +F + Y +L+ E DY +Q + TP + F + ++ + Q Sbjct: 456 LSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAERFITPELKAFEDKVLTAQDQ 515 Query: 689 GIPFQQHQFDKNVFQLEQAF 708 + ++ FD + L A Sbjct: 516 ALALEKQLFDGVLKNLRTAL 535 >2ZBW-A nrPDB Length = 335 Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 17/36 (47%) Query: 96 FCGCHVAWSGSQLRLPRPLPAVPGELTEATPNRYRY 131 F G +V G R PLP G+LT P +Y Y Sbjct: 19 FAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIY 54 >3NTT-A nrPDB Length = 724 Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 23/46 (50%) Query: 43 GPAADFSVSVERALAAKPGLDTYSLGGGGAARVRVRGSTGVAAAAG 88 GP+ + + A+ G DT S GGGG +G+ GV A+G Sbjct: 171 GPSGSQQLQIPAQPASSLGADTMSAGGGGPLGDNNQGADGVGNASG 216 >1DKL-A nrPDB Length = 410 Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 7/78 (8%) Query: 178 VYLALGLTQAEINEFFTGPAFLAWGRMGNLHTWDGPLPPSWHIKQLYLQHRVLDQMRSFG 237 V LA LT+ + + G WGR+ + H W+ L S H Q YL R + RS Sbjct: 211 VSLASMLTEIFLLQQAQGMPEPGWGRITDSHQWNTLL--SLHNAQFYLLQRTPEVARSRA 268 Query: 238 MTPVL----PAFAGHVPE 251 TP+L A H P+ Sbjct: 269 -TPLLDLIKTALTPHPPQ 285 >4YCZ-A nrPDB Length = 876 Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Query: 452 EVVYSLMAELGWRKDPVPDLAAW--VTSFAARRYGVSHPDAGAAWRLLLRSVYNCSGEAC 509 E V S A++ K+P PD A W + +FA + + S D W LL +++Y +G+ Sbjct: 584 EAVRSFQADIEQDKEPEPDSALWSLLKAFANQEFDWS--DTRLGW-LLTKAIY-ATGKVS 639 Query: 510 RGHNRSPLVRRPSLQMNTSI 529 G + + + + SL +++ Sbjct: 640 FGQDAAEKLDKASLAYASAL 659 >4TM8-A nrPDB Length = 256 Score = 29.2 bits (64), Expect = 5.8, Method: Composition-based stats. Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 14/66 (21%) Query: 10 VGVLLLAGAGGAAGDEAREAAAVRALVARLLGPGPAADFSVSVERALAAKPGLDTYSLGG 69 V V +A + G GD+ AAA A+LL +ADF SV PG D + LG Sbjct: 113 VNVHAMAASDGEFGDDLEAAAAG---YAQLL----SADFDSSV-------PGFDVHLLGM 158 Query: 70 GGAARV 75 GG V Sbjct: 159 GGEGHV 164 >2PAR-A nrPDB Length = 201 Score = 29.2 bits (64), Expect = 6.6, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 11/81 (13%) Query: 567 AVQELVSLYYEEARS---------AYLSKELASLLRAGGVLAYELLPALDEVLASDSRFL 617 A Q+LV + EE R AY +E + + +A + AY L L+E+ A ++ FL Sbjct: 102 AQQKLVDMVPEELRDIFAPLIDEHAYSDEEKSLVKQADALCAY--LKCLEELAAGNNEFL 159 Query: 618 LGSWLEQARAAAVSEAEADFY 638 L +A A E D++ Sbjct: 160 LAKTRLEATLEARRSQEMDYF 180 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.321 0.135 0.432 Lambda K H 0.267 0.0417 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,894,071 Number of Sequences: 36641 Number of extensions: 1471018 Number of successful extensions: 4444 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 3674 Number of HSP's gapped (non-prelim): 565 length of query: 743 length of database: 10,336,785 effective HSP length: 104 effective length of query: 639 effective length of database: 6,526,121 effective search space: 4170191319 effective search space used: 4170191319 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 63 (28.9 bits)