BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P54784 (914 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5V8F-A nrPDB 1882 0.0 5UJM-A nrPDB 209 5e-54 4XGC-A nrPDB 203 3e-52 5UJ7-A nrPDB 191 1e-48 5V8F-9 nrPDB 68 2e-11 2QBY-A nrPDB 63 5e-10 2V1U-A nrPDB 46 6e-05 5UJ7-C nrPDB 46 7e-05 4XGC-D nrPDB 40 0.003 3M6A-A nrPDB 34 0.27 6MCK-A nrPDB 33 0.48 5C18-A nrPDB 33 0.64 2EW1-A nrPDB 33 0.69 3HU1-A nrPDB 33 0.76 4M4W-J nrPDB 32 1.2 4LNT-RZ nrPDB 32 1.4 4IC6-A nrPDB 31 3.0 2XRX-A nrPDB 30 3.8 2FIQ-A nrPDB 30 6.3 1SXJ-B nrPDB 30 6.7 >5V8F-A nrPDB Length = 913 Score = 1882 bits (4876), Expect = 0.0, Method: Compositional matrix adjust. Identities = 913/913 (100%), Positives = 913/913 (100%) Query: 1 MAKTLKDLQGWEIITTDEQGNIIDGGQKRLRRRGAKTEHYLKRSSDGIKLGRGDSVVMHN 60 MAKTLKDLQGWEIITTDEQGNIIDGGQKRLRRRGAKTEHYLKRSSDGIKLGRGDSVVMHN Sbjct: 1 MAKTLKDLQGWEIITTDEQGNIIDGGQKRLRRRGAKTEHYLKRSSDGIKLGRGDSVVMHN 60 Query: 61 EAAGTYSVYMIQELRLNTLNNVVELWALTYLRWFEVNPLAHYRQFNPDANILNRPLNYYN 120 EAAGTYSVYMIQELRLNTLNNVVELWALTYLRWFEVNPLAHYRQFNPDANILNRPLNYYN Sbjct: 61 EAAGTYSVYMIQELRLNTLNNVVELWALTYLRWFEVNPLAHYRQFNPDANILNRPLNYYN 120 Query: 121 KLFSETANKNELYLTAELAELQLFNFIRVANVMDGSKWEVLKGNVDPERDFTVRYICEPT 180 KLFSETANKNELYLTAELAELQLFNFIRVANVMDGSKWEVLKGNVDPERDFTVRYICEPT Sbjct: 121 KLFSETANKNELYLTAELAELQLFNFIRVANVMDGSKWEVLKGNVDPERDFTVRYICEPT 180 Query: 181 GEKFVDINIEDVKAYIKKVEPREAQEYLKDLTLPSKKKEIKRGPQKKDKATQTAQISDAE 240 GEKFVDINIEDVKAYIKKVEPREAQEYLKDLTLPSKKKEIKRGPQKKDKATQTAQISDAE Sbjct: 181 GEKFVDINIEDVKAYIKKVEPREAQEYLKDLTLPSKKKEIKRGPQKKDKATQTAQISDAE 240 Query: 241 TRATDITDNEDGNEDESSDYESPSDIDVSEDMDSGEISADELEEEEDEEEDEDEEEKEAR 300 TRATDITDNEDGNEDESSDYESPSDIDVSEDMDSGEISADELEEEEDEEEDEDEEEKEAR Sbjct: 241 TRATDITDNEDGNEDESSDYESPSDIDVSEDMDSGEISADELEEEEDEEEDEDEEEKEAR 300 Query: 301 HTNSPRKRGRKIKLGKDDIDASVQPPPKKRGRKPKDPSKPRQMLLISSCRANNTPVIRKF 360 HTNSPRKRGRKIKLGKDDIDASVQPPPKKRGRKPKDPSKPRQMLLISSCRANNTPVIRKF Sbjct: 301 HTNSPRKRGRKIKLGKDDIDASVQPPPKKRGRKPKDPSKPRQMLLISSCRANNTPVIRKF 360 Query: 361 TKKNVARAKKKYTPFSKRFKSIAAIPDLTSLPEFYGNSSELMASRFENKLKTTQKHQIVE 420 TKKNVARAKKKYTPFSKRFKSIAAIPDLTSLPEFYGNSSELMASRFENKLKTTQKHQIVE Sbjct: 361 TKKNVARAKKKYTPFSKRFKSIAAIPDLTSLPEFYGNSSELMASRFENKLKTTQKHQIVE 420 Query: 421 TIFSKVKKQLNSSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGT 480 TIFSKVKKQLNSSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGT Sbjct: 421 TIFSKVKKQLNSSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGT 480 Query: 481 PGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLTWA 540 PGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLTWA Sbjct: 481 PGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLTWA 540 Query: 541 ASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVAN 600 ASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVAN Sbjct: 541 ASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVAN 600 Query: 601 TMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILI 660 TMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILI Sbjct: 601 TMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILI 660 Query: 661 DAAGNDTTVKQTLPEDVRKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAAEIAEKH 720 DAAGNDTTVKQTLPEDVRKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAAEIAEKH Sbjct: 661 DAAGNDTTVKQTLPEDVRKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAAEIAEKH 720 Query: 721 YMAKHGYGYDGKTVIEDENEEQIYDDEDKDLIESNKAKDDNDDDDDNDGVQTVHITHVMK 780 YMAKHGYGYDGKTVIEDENEEQIYDDEDKDLIESNKAKDDNDDDDDNDGVQTVHITHVMK Sbjct: 721 YMAKHGYGYDGKTVIEDENEEQIYDDEDKDLIESNKAKDDNDDDDDNDGVQTVHITHVMK 780 Query: 781 ALNETLNSHVITFMTRLSFTAKLFIYALLNLMKKNGSQEQELGDIVDEIKLLIEVNGSNK 840 ALNETLNSHVITFMTRLSFTAKLFIYALLNLMKKNGSQEQELGDIVDEIKLLIEVNGSNK Sbjct: 781 ALNETLNSHVITFMTRLSFTAKLFIYALLNLMKKNGSQEQELGDIVDEIKLLIEVNGSNK 840 Query: 841 FVMEIAKTLFQQGSDNISEQLRIISWDFVLNQLLDAGILFKQTMKNDRICCVKLNISVEE 900 FVMEIAKTLFQQGSDNISEQLRIISWDFVLNQLLDAGILFKQTMKNDRICCVKLNISVEE Sbjct: 841 FVMEIAKTLFQQGSDNISEQLRIISWDFVLNQLLDAGILFKQTMKNDRICCVKLNISVEE 900 Query: 901 AKRAMNEDETLRN 913 AKRAMNEDETLRN Sbjct: 901 AKRAMNEDETLRN 913 >5UJM-A nrPDB Length = 522 Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 138/462 (29%), Positives = 223/462 (48%), Gaps = 106/462 (22%) Query: 449 LPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDF 508 LP RE EF IY S + + +Y++G PG GKT TV EV++ L ++ ++P F Sbjct: 165 LPCREQEFQDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIRCLQQAAQANDVPPF 224 Query: 509 LYVEINGLKMVKPTDCYETLWNKVSGERLT--WAASMESLEFYFKRVPKNKKKTIVVLLD 566 Y+E+NG+K+ +P Y + K++G++ T AA + + +F + P+ +T V+L+D Sbjct: 225 QYIEVNGMKLTEPHQVYVQILQKLTGQKATANHAAELLAKQFCTRGSPQ---ETTVLLVD 281 Query: 567 ELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTG 626 ELD + T QDIMYN F+W T++ A+L+V+A+ANTMDLPER + N+++SR+G TR+ F Sbjct: 282 ELDILWTHKQDIMYNLFDWPTHKEARLVVLAIANTMDLPERIMMNRVSSRLGLTRMCFQP 341 Query: 627 YTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPEDVRKVRLRMSA 686 YT+ +L+ I+ RLK L +F ED Sbjct: 342 YTYSQLQQILRSRLKHLK-AF---------------------------ED---------- 363 Query: 687 DAIEIASRKVASVSGDARRALKVCKRAAEIAEKHYMAKHGYGYDGKTVIEDENEEQIYDD 746 DAI++ +RKVA++SGDARR L +C+RA EI E Sbjct: 364 DAIQLVARKVAALSGDARRCLDICRRATEICEF--------------------------- 396 Query: 747 EDKDLIESNKAKDDNDDDDDNDGVQTVHITHVMKALNETLNSHVITFMTRLSFTAKLFIY 806 + D+ G+ T I H M+A++E +S IT + S + F+ Sbjct: 397 --------------SQQKPDSPGLVT--IAHSMEAVDEMFSSSYITAIKNSSVLEQSFLR 440 Query: 807 ALLNLMKKNGSQEQELGDIVDEIKLLIEVNGSNKFVMEIAKTLFQQGSDNISEQLRIISW 866 A+L +++G +E I + L + G M SE + + S Sbjct: 441 AILAEFRRSGLEEATFQQIYSQHVALCRMEGLPYPTM--------------SETMAVCS- 485 Query: 867 DFVLNQLLDAGILFKQTMKNDRICCVKLNISVEEAKRAMNED 908 L +L + +ND + V+LN+S ++ A+ ++ Sbjct: 486 -----HLGSCRLLLVEPSRNDLLLRVRLNVSQDDVLYALKDE 522 >4XGC-A nrPDB Length = 393 Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 116/389 (29%), Positives = 187/389 (48%), Gaps = 87/389 (22%) Query: 449 LPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDF 508 LP RE EF +IY I+ +YV+G PG GKT TV V++ L + Q E+P F Sbjct: 37 LPCREREFENIYAFLEGKIQDQCGGCMYVSGVPGTGKTATVTGVIRTLQRMAKQNELPAF 96 Query: 509 LYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDEL 568 Y+EING+++ +P Y ++ +++G+ ++W + LE F P ++ T V+L+DEL Sbjct: 97 EYLEINGMRLTEPRQAYVQIYKQLTGKTVSWEQAHALLEKRFT-TPAPRRVTTVLLVDEL 155 Query: 569 DAMVTKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTGYT 628 D + + QD++YN +W T AKL+V+ +ANTMDLPER L K+TSR+G TR+ F Y+ Sbjct: 156 DILCNRRQDVVYNLLDWPTKSAAKLVVVTIANTMDLPERLLMGKVTSRLGLTRLTFQPYS 215 Query: 629 HEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPEDVRKVRLRMSADA 688 H++L+ I+ RL G +++F +A Sbjct: 216 HKQLQEIVTARLGG-SETF-------------------------------------KGEA 237 Query: 689 IEIASRKVASVSGDARRALKVCKRAAEIAEKHYMAKHGYGYDGKTVIEDENEEQIYDDED 748 +++ +RKVA+VSGDARRAL +C+RA EIA Sbjct: 238 VQLVARKVAAVSGDARRALDICRRATEIA------------------------------- 266 Query: 749 KDLIESNKAKDDNDDDDDNDGVQTVHITHVMKALNETLNSHVITFMTRLSFTAKLFIYAL 808 D V+ V + HV +AL E + S + + S ++F+ A+ Sbjct: 267 -----------------DTAAVKCVTMLHVQQALAEMIASAKVQAIRNCSRMEQIFLQAI 309 Query: 809 LNLMKKNGSQEQELGDIVDEIKLLIEVNG 837 + + G +E + +++ + G Sbjct: 310 AAEVTRTGVEETTFMGVYQQVETIAAFMG 338 >5UJ7-A nrPDB Length = 391 Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 138/462 (29%), Positives = 223/462 (48%), Gaps = 106/462 (22%) Query: 449 LPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDF 508 LP RE EF IY S + + +Y++G PG GKT TV EV++ L ++ ++P F Sbjct: 34 LPCREQEFQDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIRCLQQAAQANDVPPF 93 Query: 509 LYVEINGLKMVKPTDCYETLWNKVSGERLT--WAASMESLEFYFKRVPKNKKKTIVVLLD 566 Y+E+NG+K+ +P Y + K++G++ T AA + + +F + P+ +T V+L+D Sbjct: 94 QYIEVNGMKLTEPHQVYVQILQKLTGQKATANHAAELLAKQFCTRGSPQ---ETTVLLVD 150 Query: 567 ELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTG 626 ELD + T QDIMYN F+W T++ A+L+V+A+ANTMDLPER + N+++SR+G TR+ F Sbjct: 151 ELDLLWTHKQDIMYNLFDWPTHKEARLVVLAIANTMDLPERIMMNRVSSRLGLTRMCFQP 210 Query: 627 YTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPEDVRKVRLRMSA 686 YT+ +L+ I+ RLK L +F ED Sbjct: 211 YTYSQLQQILRSRLKHLK-AF---------------------------ED---------- 232 Query: 687 DAIEIASRKVASVSGDARRALKVCKRAAEIAEKHYMAKHGYGYDGKTVIEDENEEQIYDD 746 DAI++ +RKVA++SGDARR L +C+RA EI E Sbjct: 233 DAIQLVARKVAALSGDARRCLDICRRATEICEF--------------------------- 265 Query: 747 EDKDLIESNKAKDDNDDDDDNDGVQTVHITHVMKALNETLNSHVITFMTRLSFTAKLFIY 806 + D+ G+ T I H M+A++E +S IT + S + F+ Sbjct: 266 --------------SQQKPDSPGLVT--IAHSMEAVDEMFSSSYITAIKNSSVLEQSFLR 309 Query: 807 ALLNLMKKNGSQEQELGDIVDEIKLLIEVNGSNKFVMEIAKTLFQQGSDNISEQLRIISW 866 A+L +++G +E I + L + G M SE + + S Sbjct: 310 AILAEFRRSGLEEATFQQIYSQHVALCRMEGLPYPTM--------------SETMAVCS- 354 Query: 867 DFVLNQLLDAGILFKQTMKNDRICCVKLNISVEEAKRAMNED 908 L +L + +ND + V+LN+S ++ A+ ++ Sbjct: 355 -----HLGSCRLLLVEPSRNDLLLRVRLNVSQDDVLYALKDE 391 >5V8F-9 nrPDB Length = 513 Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 81/354 (22%), Positives = 146/354 (41%), Gaps = 92/354 (25%) Query: 420 ETIFSKVKKQLNSSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAG 479 ++IF + K L S E++ + LPAR E+ + AI + ++Y+ G Sbjct: 52 QSIFLRTKALLQKS---SELVNLNSSDGALPARTAEYEQVMNFLAKAISEHRSDSLYITG 108 Query: 480 TPGVGKT----LTVREVVKEL-LSSSAQR------------------EIPD-----FLYV 511 PG GKT + +R+ + L LS S R E+PD Sbjct: 109 PPGTGKTAQLDMIIRQKFQSLPLSLSTPRSKDVLRHTNPNLQNLSWFELPDGRLESVAVT 168 Query: 512 EINGLKMVKPTDCYETLWNK---VSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDEL 568 IN + + +P+ ++ +++ ++G L +M+ L+ + + P +KK T VV+LDE+ Sbjct: 169 SINCISLGEPSSIFQKIFDSFQDLNGPTL-QIKNMQHLQKFLE--PYHKKTTFVVVLDEM 225 Query: 569 DAMV------TKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIGFTR- 621 D ++ T+S + F ++I +AN++D+ +R L SR+ R Sbjct: 226 DRLLHANTSETQSVRTILELFLLAKLPTVSFVLIGMANSLDMKDRFL-----SRLNLDRG 280 Query: 622 -----IMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPED 676 I+F YT E++ I+ ++ L T + Q + Sbjct: 281 LLPQTIVFQPYTAEQMYEIVIQKMSSL----------------------PTIIFQPM--- 315 Query: 677 VRKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAAEI--AEKHYMAKHGYG 728 AI+ A++K A +GD R+ V + + EI EK ++ G Sbjct: 316 -----------AIKFAAKKCAGNTGDLRKLFDVLRGSIEIYELEKRFLLSPTRG 358 >2QBY-A nrPDB Length = 386 Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 88/320 (27%), Positives = 138/320 (43%), Gaps = 62/320 (19%) Query: 430 LNSSYVKEEILKSANFQDYLPARENEF---ASIYLSAYSAIESDSATTIYVAGTPGVGKT 486 ++S ++ E L D LP RE++ ASI Y + I++ G G GKT Sbjct: 3 MSSIFINREYLLPDYIPDELPHREDQIRKIASILAPLY---REEKPNNIFIYGLTGTGKT 59 Query: 487 LTVREVVKELLSSSAQREIPDFLYVEINGLKMVKP----TDCYETLWNKVSGERLTWAAS 542 VVK +LS ++ + F +V IN ++ P D E+L KV L+ A Sbjct: 60 ----AVVKFVLSKLHKKFLGKFKHVYINTRQIDTPYRVLADLLESLDVKVPFTGLSIA-- 113 Query: 543 MESLEFYFKRVP--KNKKKTIVVLLDELDAMVTK-SQDIMYNFFNWTTYEN-AKLIVIAV 598 E Y + V ++ +V++LDE+DA V K + DI+Y + N +K+ I + Sbjct: 114 ----ELYRRLVKAVRDYGSQVVIVLDEIDAFVKKYNDDILYKLSRINSEVNKSKISFIGI 169 Query: 599 ANTMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAI 658 N + + L ++ S + I+F Y EEL++I+ R + + K G Sbjct: 170 TNDVKFVD-LLDPRVKSSLSEEEIIFPPYNAEELEDILTKRAQ--------MAFKPG--- 217 Query: 659 LIDAAGNDTTVKQTLPEDVRKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAAEIAE 718 LP++V I++ + A GDARRAL + + + EIAE Sbjct: 218 -------------VLPDNV-----------IKLCAALAAREHGDARRALDLLRVSGEIAE 253 Query: 719 --KHYMAKHGYGYDGKTVIE 736 K K Y Y K IE Sbjct: 254 RMKDTKVKEEYVYMAKEEIE 273 >2V1U-A nrPDB Length = 387 Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 65/293 (22%), Positives = 119/293 (40%), Gaps = 51/293 (17%) Query: 434 YVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVV 493 + K +L D LP RE E + A+ + + + G G GKT R V+ Sbjct: 6 FRKRWVLLPDYVPDVLPHREAELRRLAEVLAPALRGEKPSNALLYGLTGTGKTAVARLVL 65 Query: 494 KELLSSSAQREI---PDFLYVEINGLKMVKPTDCYETLWNKVSGERL--TWAASMESLEF 548 + L + ++ + P + +N P + V G R+ T + E E Sbjct: 66 RRLEARASSLGVLVKPIY----VNARHRETPYRVASAIAEAV-GVRVPFTGLSVGEVYER 120 Query: 549 YFKRVPKNKKKTIVVLLDELDAMVTK--SQDIMYNF--FNWTTYENAKLIVIAVANTMDL 604 KR+ + + I+VL DE+D + + QD++Y N + + ++ + N++ Sbjct: 121 LVKRLSRLRGIYIIVL-DEIDFLPKRPGGQDLLYRITRINQELGDRVWVSLVGITNSLGF 179 Query: 605 PERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAG 664 E L ++ S +G ++F YT +L++I++ R + ++F N ++D Sbjct: 180 VE-NLEPRVKSSLGEVELVFPPYTAPQLRDILETRAE---EAF--------NPGVLDP-- 225 Query: 665 NDTTVKQTLPEDVRKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAAEIA 717 D + + + A GDARRAL + + A EIA Sbjct: 226 ----------------------DVVPLCAALAAREHGDARRALDLLRVAGEIA 256 >5UJ7-C nrPDB Length = 436 Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 38/166 (22%), Positives = 79/166 (47%), Gaps = 12/166 (7%) Query: 465 SAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDC 524 +A+ +S ++ + G G GKT+ + +KEL+ E + L V +NGL + Sbjct: 54 TALHGES-NSVLIIGPRGSGKTMLINHALKELMEIEEVSE--NVLQVHLNGLLQINDKIA 110 Query: 525 YETLWNKVSGERL----TWAASMESLEFYFKRVPKNKKKT---IVVLLDELDAMV-TKSQ 576 + + +++ E + + + E+L F + + K + + ++ +LDE D K+Q Sbjct: 111 LKEITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQ 170 Query: 577 DIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIGFTRI 622 ++YN F+ + + VI + +D+ E L ++ SR +I Sbjct: 171 TLLYNLFDISQSAQTPIAVIGLTCRLDILEL-LEKRVKSRFSHRQI 215 >4XGC-D nrPDB Length = 459 Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust. Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 22/204 (10%) Query: 468 ESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEING------LKMVKP 521 E + ++ + G G GKT + V+ +LL + + E + L V ++G +K Sbjct: 45 EMGESNSLLLLGPRGSGKTTLINSVLADLLPNKSFGE--NTLIVHLDGNLHTDDRVALKS 102 Query: 522 TDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKK--KTIVVLLDELDAMVTK-SQDI 578 L N G+ + + E+L F + + K K+++ +L+E D +Q + Sbjct: 103 ITVQMQLENAADGK--VFGSFAENLAFLLQCLKAGGKHSKSVIFILEEFDLFCAHHNQTL 160 Query: 579 MYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNIIDL 638 +YN F+ + A + V+ V +D+ E L ++ SR R +F + ++ +DL Sbjct: 161 LYNLFDVSQSAQAPICVLGVTCRLDVIEL-LEKRVKSRFS-HRQVFLFPSLRRFEDYVDL 218 Query: 639 RLKGLNDSFFYVDTKTGNAILIDA 662 L+ TGN++L+ A Sbjct: 219 CRDLLS-------LPTGNSLLLAA 235 >3M6A-A nrPDB Length = 543 Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust. Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 20/112 (17%) Query: 460 YLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMV 519 YL+ +S + +AG PGVGKT + + K L F+ + + G++ Sbjct: 96 YLAVQKLTKSLKGPILCLAGPPGVGKTSLAKSIAKSLGRK--------FVRISLGGVRD- 146 Query: 520 KPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAM 571 +++ G R T+ +M + + K K V LLDE+D M Sbjct: 147 ---------ESEIRGHRRTYVGAMPG--RIIQGMKKAGKLNPVFLLDEIDKM 187 >6MCK-A nrPDB Length = 606 Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 28/117 (23%) Query: 460 YLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMV 519 + + + AI I + G PG GKTL R V E + F ++ ING +++ Sbjct: 18 HPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA---------FFFL-INGPEIM 67 Query: 520 KPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQ 576 +K++GE S +L F+ KN ++ +DELDA+ K + Sbjct: 68 ----------SKLAGE------SESNLRKAFEEAEKNAPA--IIFIDELDAIAPKRE 106 >5C18-A nrPDB Length = 785 Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 28/117 (23%) Query: 460 YLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMV 519 + + + AI I + G PG GKTL R V E + F ++ ING +++ Sbjct: 225 HPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA---------FFFL-INGPEIM 274 Query: 520 KPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQ 576 +K++GE S +L F+ KN ++ +DELDA+ K + Sbjct: 275 ----------SKLAGE------SESNLRKAFEEAEKNAPA--IIFIDELDAIAPKRE 313 >2EW1-A nrPDB Length = 201 Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 23/138 (16%) Query: 475 IYVAGTPGVGKTLTVREVVKELLSSSAQREIP-DFLY--VEINGLKMVKPTDCYETLWNK 531 I + G GVGKT VR + L I DF+ VEING K VK +W+ Sbjct: 29 IVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEK-VKLQ-----IWDT 82 Query: 532 VSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFN-WTTYEN 590 ER F+ + ++ ++ L+ D +S + + Y + Sbjct: 83 AGQER-------------FRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYAS 129 Query: 591 AKLIVIAVANTMDLPERQ 608 K+I + V N +DL ER+ Sbjct: 130 NKVITVLVGNKIDLAERR 147 >3HU1-A nrPDB Length = 489 Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 28/117 (23%) Query: 460 YLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMV 519 + + + AI I + G PG GKTL R V E + F ++ ING +++ Sbjct: 226 HPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGA---------FFFL-INGPEIM 275 Query: 520 KPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQ 576 +K++GE S +L F+ KN ++ +DELDA+ K + Sbjct: 276 ----------SKLAGE------SESNLRKAFEEAEKNAPA--IIFIDELDAIAPKRE 314 >4M4W-J nrPDB Length = 317 Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 11/88 (12%) Query: 430 LNSSYVKEEILKSANFQDYL---PARENEFASI--YLSAYSAIESDSATTIYVAGTPGVG 484 + S Y+++++L A FQ P+R F + +L +Y+ E+ +Y+ G GVG Sbjct: 117 MKSMYIQQDLL-GATFQQVDISDPSRLAMFQHVTDFLKSYN--ETGKGKGLYLYGKFGVG 173 Query: 485 KTLTVREVVKELLS---SSAQREIPDFL 509 KT + + EL SS +P+F+ Sbjct: 174 KTFMLAAIANELAEKEYSSMIVYVPEFV 201 >4LNT-RZ nrPDB Length = 206 Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 5/55 (9%) Query: 469 SDSATTIYV----AGTP-GVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKM 518 SD +YV GTP GV ++E+ +++L + R IP+F+ V+++GL++ Sbjct: 92 SDEPVEMYVPLRFVGTPAGVRAGGVLQEIHRDILVKVSPRNIPEFIEVDVSGLEI 146 >4IC6-A nrPDB Length = 368 Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 3/98 (3%) Query: 640 LKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPEDVRKVRLRMSADAIEIASRKVASV 699 L G+N + F T+TG + + A +TV + +P+ ++ ++ + IE+A VA+ Sbjct: 215 LIGINTAIF---TQTGTSAGVGFAIPSSTVLKIVPQLIQFSKVLRAGINIELAPDPVANQ 271 Query: 700 SGDARRALKVCKRAAEIAEKHYMAKHGYGYDGKTVIED 737 AL + +AEK + G+ G V+ D Sbjct: 272 LNVRNGALVLQVPGKSLAEKAGLHPTSRGFAGNIVLGD 309 >2XRX-A nrPDB Length = 459 Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust. Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 10/136 (7%) Query: 625 TGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTV---KQTLPEDVRKVR 681 T +T E ++ ++D + KGL D Y D L G + + +PE + Sbjct: 17 TNWTPEAIRGLVD-QEKGLLDPRIYADQSLYELELERVFGRSWLLLGHESHVPETGDFLA 75 Query: 682 LRMSADAIEIASRKVASV----SGDARRALKVCKRAAEIAEKHYMAKHGYGYD--GKTVI 735 M D + + +K S+ + R +++C+ A A+ + HG+ YD GK V Sbjct: 76 TYMGEDPVVMVRQKDKSIKVFLNQCRHRGMRICRSDAGNAKAFTCSYHGWAYDIAGKLVN 135 Query: 736 EDENEEQIYDDEDKDL 751 +E D ++ D Sbjct: 136 VPFEKEAFCDKKEGDC 151 >2FIQ-A nrPDB Length = 420 Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 11/84 (13%) Query: 766 DNDGVQTVHITHVMKALNETLNSHVITFMTRLSFTAKLFIYALL----------NLMKKN 815 + +Q+VHITHV A N TL +H F+ R A + A++ N++ Sbjct: 178 EASAIQSVHITHVEDAAN-TLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIHYQ 236 Query: 816 GSQEQELGDIVDEIKLLIEVNGSN 839 + Q L ++ +++ E + ++ Sbjct: 237 PQEAQALAQWIENTRMVYEAHSTD 260 >1SXJ-B nrPDB Length = 323 Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust. Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 22/102 (21%) Query: 475 IYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSG 534 + ++G PG+GKT +V + ELL S + + + G+ +V+ N++ Sbjct: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVR---------NQIK- 94 Query: 535 ERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQ 576 F K++ K +V+LDE D+M +Q Sbjct: 95 ------------HFAQKKLHLPPGKHKIVILDEADSMTAGAQ 124 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5V8F-A nrPDB 1537 0.0 5UJM-A nrPDB 454 e-128 5UJ7-A nrPDB 433 e-121 4XGC-A nrPDB 405 e-113 2QBY-A nrPDB 270 3e-72 2V1U-A nrPDB 259 5e-69 5V8F-9 nrPDB 238 6e-63 5UJ7-C nrPDB 156 3e-38 Sequences not found previously or not previously below threshold: 4XGC-D nrPDB 114 1e-25 2QBY-B nrPDB 106 4e-23 1FNN-A nrPDB 71 3e-12 5V8F-D nrPDB 67 3e-11 1W5T-A nrPDB 59 9e-09 4XGC-E nrPDB 53 7e-07 5UJM-E nrPDB 48 2e-05 5UJ7-E nrPDB 48 2e-05 5VHO-F nrPDB 47 3e-05 5VFP-F nrPDB 46 6e-05 6EPD-M nrPDB 46 9e-05 5C18-A nrPDB 45 1e-04 3HU1-A nrPDB 45 1e-04 5VHP-C nrPDB 45 1e-04 5M32-h nrPDB 45 1e-04 5GJQ-J nrPDB 45 1e-04 6E11-1 nrPDB 45 2e-04 5VC7-A nrPDB 44 2e-04 6EF0-M nrPDB 44 2e-04 6MCK-A nrPDB 44 2e-04 1SXJ-C nrPDB 44 3e-04 5G4G-A nrPDB 44 3e-04 6MDP-A nrPDB 44 3e-04 1G8P-A nrPDB 44 4e-04 5KWA-A nrPDB 43 7e-04 3M6A-A nrPDB 43 9e-04 5A5B-M nrPDB 43 0.001 1IN6-A nrPDB 42 0.001 6CHS-H nrPDB 42 0.001 6HE4-H nrPDB 41 0.002 6EF2-J nrPDB 41 0.003 6EF1-K nrPDB 41 0.003 3H4M-A nrPDB 41 0.004 6HE9-H nrPDB 40 0.004 6BLB-A nrPDB 40 0.004 3JCO-J nrPDB 40 0.004 4M4W-J nrPDB 40 0.004 4YPL-A nrPDB 40 0.005 6MAT-A nrPDB 40 0.005 5WVI-K nrPDB 40 0.006 6EPC-H nrPDB 39 0.007 5VHN-D nrPDB 39 0.009 5W0T-A nrPDB 39 0.009 1SXJ-D nrPDB 39 0.010 5KG8-A nrPDB 39 0.010 6AZ0-A nrPDB 38 0.014 5T0C-AD nrPDB 38 0.021 5E7P-A nrPDB 38 0.021 5VHP-E nrPDB 38 0.022 2X8A-A nrPDB 38 0.025 6MSD-E nrPDB 38 0.026 6AMN-A nrPDB 38 0.028 2CE7-A nrPDB 37 0.032 3D8B-A nrPDB 37 0.037 2QZ4-A nrPDB 37 0.048 4YPN-A nrPDB 36 0.054 1SXJ-A nrPDB 36 0.065 4LGM-A nrPDB 36 0.065 5UBV-A nrPDB 36 0.066 5VY8-A nrPDB 36 0.068 3WHK-A nrPDB 36 0.087 4D81-A nrPDB 36 0.090 5EQT-A nrPDB 36 0.098 3SYK-A nrPDB 36 0.10 1SXJ-B nrPDB 35 0.12 1HQC-A nrPDB 35 0.12 1OFI-A nrPDB 35 0.12 2R65-A nrPDB 34 0.22 5VHO-A nrPDB 34 0.25 5VFU-A nrPDB 34 0.25 4L16-A nrPDB 34 0.27 1TKI-A nrPDB 34 0.27 1YE8-A nrPDB 34 0.28 2AW5-A nrPDB 34 0.34 5TSG-B nrPDB 34 0.34 2GA8-A nrPDB 34 0.37 5DO7-A nrPDB 34 0.41 5W3D-A nrPDB 33 0.46 4L4U-A nrPDB 33 0.48 5VHF-B nrPDB 33 0.49 2GZA-A nrPDB 33 0.52 6MSK-B nrPDB 33 0.59 2CHV-A nrPDB 33 0.61 6FVU-I nrPDB 33 0.63 3JCP-I nrPDB 33 0.63 1R6B-X nrPDB 33 0.68 5VFP-B nrPDB 33 0.69 6EF3-H nrPDB 33 0.71 6EF0-H nrPDB 33 0.71 4BS1-B nrPDB 33 0.73 5VHO-B nrPDB 33 0.76 6GMH-U nrPDB 33 0.86 5ZWM-J nrPDB 33 0.87 5ZFR-A nrPDB 33 0.87 2W58-A nrPDB 33 0.87 4LZZ-A nrPDB 32 0.98 6ED3-A nrPDB 32 0.99 1NY5-A nrPDB 32 0.99 6EF1-I nrPDB 32 1.0 2CHG-A nrPDB 32 1.0 3PFI-A nrPDB 32 1.2 6QI8-A nrPDB 32 1.3 2XSZ-A nrPDB 32 1.3 6EF0-L nrPDB 32 1.3 5GWJ-A nrPDB 32 1.3 6EMW-E nrPDB 32 1.3 5ZFQ-A nrPDB 32 1.3 4LCB-A nrPDB 32 1.5 1LV7-A nrPDB 32 1.5 6FVU-L nrPDB 32 1.7 5O6D-A nrPDB 31 1.7 2Z4R-A nrPDB 31 1.7 2B5U-A nrPDB 31 1.8 5WVI-L nrPDB 31 1.8 6EM8-A nrPDB 31 1.9 5D4W-A nrPDB 31 1.9 3MKD-A nrPDB 31 2.0 2JJ9-A nrPDB 31 2.0 1JBK-A nrPDB 31 2.3 6DBW-B nrPDB 31 2.4 3WEE-A nrPDB 31 2.5 1Y63-A nrPDB 31 2.7 5V8F-E nrPDB 31 2.9 5WDH-A nrPDB 31 3.2 5OFO-C nrPDB 31 3.2 4CIU-A nrPDB 31 3.2 4XGU-A nrPDB 31 3.3 5WWN-A nrPDB 31 3.4 1IM2-A nrPDB 31 3.5 6D00-1 nrPDB 31 3.6 4I5O-A nrPDB 30 3.8 3K9D-A nrPDB 30 3.8 6FAI-l nrPDB 30 3.8 4N5A-A nrPDB 30 3.9 6FWS-A nrPDB 30 3.9 3PXI-A nrPDB 30 3.9 3PXG-A nrPDB 30 4.1 5CB6-A nrPDB 30 4.3 3J3U-A nrPDB 30 4.3 6FAI-k nrPDB 30 4.4 6DT0-A nrPDB 30 5.2 5V8F-F nrPDB 30 5.3 6B5C-A nrPDB 30 5.7 6B5D-A nrPDB 30 5.7 5WC0-A nrPDB 30 5.7 5VQ9-D nrPDB 30 5.8 4BN2-A nrPDB 30 5.8 1E94-E nrPDB 30 5.9 1QVR-A nrPDB 30 5.9 3ODP-A nrPDB 30 6.0 5MM4-K nrPDB 29 9.1 6GEJ-U nrPDB 29 9.4 4WW4-B nrPDB 29 9.8 5MM7-K nrPDB 29 9.9 >5V8F-A nrPDB Length = 913 Score = 1537 bits (3978), Expect = 0.0, Method: Composition-based stats. Identities = 913/913 (100%), Positives = 913/913 (100%) Query: 1 MAKTLKDLQGWEIITTDEQGNIIDGGQKRLRRRGAKTEHYLKRSSDGIKLGRGDSVVMHN 60 MAKTLKDLQGWEIITTDEQGNIIDGGQKRLRRRGAKTEHYLKRSSDGIKLGRGDSVVMHN Sbjct: 1 MAKTLKDLQGWEIITTDEQGNIIDGGQKRLRRRGAKTEHYLKRSSDGIKLGRGDSVVMHN 60 Query: 61 EAAGTYSVYMIQELRLNTLNNVVELWALTYLRWFEVNPLAHYRQFNPDANILNRPLNYYN 120 EAAGTYSVYMIQELRLNTLNNVVELWALTYLRWFEVNPLAHYRQFNPDANILNRPLNYYN Sbjct: 61 EAAGTYSVYMIQELRLNTLNNVVELWALTYLRWFEVNPLAHYRQFNPDANILNRPLNYYN 120 Query: 121 KLFSETANKNELYLTAELAELQLFNFIRVANVMDGSKWEVLKGNVDPERDFTVRYICEPT 180 KLFSETANKNELYLTAELAELQLFNFIRVANVMDGSKWEVLKGNVDPERDFTVRYICEPT Sbjct: 121 KLFSETANKNELYLTAELAELQLFNFIRVANVMDGSKWEVLKGNVDPERDFTVRYICEPT 180 Query: 181 GEKFVDINIEDVKAYIKKVEPREAQEYLKDLTLPSKKKEIKRGPQKKDKATQTAQISDAE 240 GEKFVDINIEDVKAYIKKVEPREAQEYLKDLTLPSKKKEIKRGPQKKDKATQTAQISDAE Sbjct: 181 GEKFVDINIEDVKAYIKKVEPREAQEYLKDLTLPSKKKEIKRGPQKKDKATQTAQISDAE 240 Query: 241 TRATDITDNEDGNEDESSDYESPSDIDVSEDMDSGEISADELEEEEDEEEDEDEEEKEAR 300 TRATDITDNEDGNEDESSDYESPSDIDVSEDMDSGEISADELEEEEDEEEDEDEEEKEAR Sbjct: 241 TRATDITDNEDGNEDESSDYESPSDIDVSEDMDSGEISADELEEEEDEEEDEDEEEKEAR 300 Query: 301 HTNSPRKRGRKIKLGKDDIDASVQPPPKKRGRKPKDPSKPRQMLLISSCRANNTPVIRKF 360 HTNSPRKRGRKIKLGKDDIDASVQPPPKKRGRKPKDPSKPRQMLLISSCRANNTPVIRKF Sbjct: 301 HTNSPRKRGRKIKLGKDDIDASVQPPPKKRGRKPKDPSKPRQMLLISSCRANNTPVIRKF 360 Query: 361 TKKNVARAKKKYTPFSKRFKSIAAIPDLTSLPEFYGNSSELMASRFENKLKTTQKHQIVE 420 TKKNVARAKKKYTPFSKRFKSIAAIPDLTSLPEFYGNSSELMASRFENKLKTTQKHQIVE Sbjct: 361 TKKNVARAKKKYTPFSKRFKSIAAIPDLTSLPEFYGNSSELMASRFENKLKTTQKHQIVE 420 Query: 421 TIFSKVKKQLNSSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGT 480 TIFSKVKKQLNSSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGT Sbjct: 421 TIFSKVKKQLNSSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGT 480 Query: 481 PGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLTWA 540 PGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLTWA Sbjct: 481 PGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLTWA 540 Query: 541 ASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVAN 600 ASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVAN Sbjct: 541 ASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVAN 600 Query: 601 TMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILI 660 TMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILI Sbjct: 601 TMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILI 660 Query: 661 DAAGNDTTVKQTLPEDVRKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAAEIAEKH 720 DAAGNDTTVKQTLPEDVRKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAAEIAEKH Sbjct: 661 DAAGNDTTVKQTLPEDVRKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAAEIAEKH 720 Query: 721 YMAKHGYGYDGKTVIEDENEEQIYDDEDKDLIESNKAKDDNDDDDDNDGVQTVHITHVMK 780 YMAKHGYGYDGKTVIEDENEEQIYDDEDKDLIESNKAKDDNDDDDDNDGVQTVHITHVMK Sbjct: 721 YMAKHGYGYDGKTVIEDENEEQIYDDEDKDLIESNKAKDDNDDDDDNDGVQTVHITHVMK 780 Query: 781 ALNETLNSHVITFMTRLSFTAKLFIYALLNLMKKNGSQEQELGDIVDEIKLLIEVNGSNK 840 ALNETLNSHVITFMTRLSFTAKLFIYALLNLMKKNGSQEQELGDIVDEIKLLIEVNGSNK Sbjct: 781 ALNETLNSHVITFMTRLSFTAKLFIYALLNLMKKNGSQEQELGDIVDEIKLLIEVNGSNK 840 Query: 841 FVMEIAKTLFQQGSDNISEQLRIISWDFVLNQLLDAGILFKQTMKNDRICCVKLNISVEE 900 FVMEIAKTLFQQGSDNISEQLRIISWDFVLNQLLDAGILFKQTMKNDRICCVKLNISVEE Sbjct: 841 FVMEIAKTLFQQGSDNISEQLRIISWDFVLNQLLDAGILFKQTMKNDRICCVKLNISVEE 900 Query: 901 AKRAMNEDETLRN 913 AKRAMNEDETLRN Sbjct: 901 AKRAMNEDETLRN 913 >5UJM-A nrPDB Length = 522 Score = 454 bits (1168), Expect = e-128, Method: Composition-based stats. Identities = 154/554 (27%), Positives = 253/554 (45%), Gaps = 120/554 (21%) Query: 370 KKYTPFSKRFKSIAAI--PDLTSLPEFYGNSSELMASRF-------ENKLKTTQKHQI-V 419 KK TP + ++ A ++ SL Y + E+ A + +N + + QI Sbjct: 74 KKTTPLRRLMEAFAKRQGKEMDSLTFLY-DGIEIQADQTPEDLDMEDNDIIEAHREQIGA 132 Query: 420 ETIFSKVKKQLNSSYVKEEI---LKSANFQDYLPARENEFASIYLSAYSAIESDSATTIY 476 I S+ + V EE L + + LP RE EF IY S + + +Y Sbjct: 133 PQIRSRSLAAQEPASVLEEARLRLHVSAVPESLPCREQEFQDIYNFVESKLLDHTGGCMY 192 Query: 477 VAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGER 536 ++G PG GKT TV EV++ L ++ ++P F Y+E+NG+K+ +P Y + K++G++ Sbjct: 193 ISGVPGTGKTATVHEVIRCLQQAAQANDVPPFQYIEVNGMKLTEPHQVYVQILQKLTGQK 252 Query: 537 LT--WAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLI 594 T AA + + +F + P+ +T V+L+DELD + T QDIMYN F+W T++ A+L+ Sbjct: 253 ATANHAAELLAKQFCTRGSPQ---ETTVLLVDELDILWTHKQDIMYNLFDWPTHKEARLV 309 Query: 595 VIAVANTMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKT 654 V+A+ANTMDLPER + N+++SR+G TR+ F YT+ +L+ I+ RLK L Sbjct: 310 VLAIANTMDLPERIMMNRVSSRLGLTRMCFQPYTYSQLQQILRSRLKHLK---------- 359 Query: 655 GNAILIDAAGNDTTVKQTLPEDVRKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAA 714 DAI++ +RKVA++SGDARR L +C+RA Sbjct: 360 ----------------------------AFEDDAIQLVARKVAALSGDARRCLDICRRAT 391 Query: 715 EIAEKHYMAKHGYGYDGKTVIEDENEEQIYDDEDKDLIESNKAKDDNDDDDDNDGVQTVH 774 EI E + D+ G+ V Sbjct: 392 EICEF-----------------------------------------SQQKPDSPGL--VT 408 Query: 775 ITHVMKALNETLNSHVITFMTRLSFTAKLFIYALLNLMKKNGSQEQELGDIVDEIKLLIE 834 I H M+A++E +S IT + S + F+ A+L +++G +E I + L Sbjct: 409 IAHSMEAVDEMFSSSYITAIKNSSVLEQSFLRAILAEFRRSGLEEATFQQIYSQHVALCR 468 Query: 835 VNGSNKFVMEIAKTLFQQGSDNISEQLRIISWDFVLNQLLDAGILFKQTMKNDRICCVKL 894 + G M SE + + S L +L + +ND + V+L Sbjct: 469 MEGLPYPTM--------------SETMAVCS------HLGSCRLLLVEPSRNDLLLRVRL 508 Query: 895 NISVEEAKRAMNED 908 N+S ++ A+ ++ Sbjct: 509 NVSQDDVLYALKDE 522 >5UJ7-A nrPDB Length = 391 Score = 433 bits (1112), Expect = e-121, Method: Composition-based stats. Identities = 136/471 (28%), Positives = 222/471 (47%), Gaps = 106/471 (22%) Query: 440 LKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSS 499 L + + LP RE EF IY S + + +Y++G PG GKT TV EV++ L + Sbjct: 25 LHVSAVPESLPCREQEFQDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIRCLQQA 84 Query: 500 SAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLT--WAASMESLEFYFKRVPKNK 557 + ++P F Y+E+NG+K+ +P Y + K++G++ T AA + + +F + P+ Sbjct: 85 AQANDVPPFQYIEVNGMKLTEPHQVYVQILQKLTGQKATANHAAELLAKQFCTRGSPQ-- 142 Query: 558 KKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRI 617 +T V+L+DELD + T QDIMYN F+W T++ A+L+V+A+ANTMDLPER + N+++SR+ Sbjct: 143 -ETTVLLVDELDLLWTHKQDIMYNLFDWPTHKEARLVVLAIANTMDLPERIMMNRVSSRL 201 Query: 618 GFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPEDV 677 G TR+ F YT+ +L+ I+ RLK L Sbjct: 202 GLTRMCFQPYTYSQLQQILRSRLKHLK--------------------------------- 228 Query: 678 RKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAAEIAEKHYMAKHGYGYDGKTVIED 737 DAI++ +RKVA++SGDARR L +C+RA EI E Sbjct: 229 -----AFEDDAIQLVARKVAALSGDARRCLDICRRATEICEF------------------ 265 Query: 738 ENEEQIYDDEDKDLIESNKAKDDNDDDDDNDGVQTVHITHVMKALNETLNSHVITFMTRL 797 + D+ G+ V I H M+A++E +S IT + Sbjct: 266 -----------------------SQQKPDSPGL--VTIAHSMEAVDEMFSSSYITAIKNS 300 Query: 798 SFTAKLFIYALLNLMKKNGSQEQELGDIVDEIKLLIEVNGSNKFVMEIAKTLFQQGSDNI 857 S + F+ A+L +++G +E I + L + G M Sbjct: 301 SVLEQSFLRAILAEFRRSGLEEATFQQIYSQHVALCRMEGLPYPTM-------------- 346 Query: 858 SEQLRIISWDFVLNQLLDAGILFKQTMKNDRICCVKLNISVEEAKRAMNED 908 SE + + S L +L + +ND + V+LN+S ++ A+ ++ Sbjct: 347 SETMAVCS------HLGSCRLLLVEPSRNDLLLRVRLNVSQDDVLYALKDE 391 >4XGC-A nrPDB Length = 393 Score = 405 bits (1041), Expect = e-113, Method: Composition-based stats. Identities = 129/475 (27%), Positives = 214/475 (45%), Gaps = 107/475 (22%) Query: 437 EEILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKEL 496 E L + LP RE EF +IY I+ +YV+G PG GKT TV V++ L Sbjct: 25 REQLHVSVVPKSLPCREREFENIYAFLEGKIQDQCGGCMYVSGVPGTGKTATVTGVIRTL 84 Query: 497 LSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKN 556 + Q E+P F Y+EING+++ +P Y ++ +++G+ ++W + LE F P Sbjct: 85 QRMAKQNELPAFEYLEINGMRLTEPRQAYVQIYKQLTGKTVSWEQAHALLEKRFT-TPAP 143 Query: 557 KKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSR 616 ++ T V+L+DELD + + QD++YN +W T AKL+V+ +ANTMDLPER L K+TSR Sbjct: 144 RRVTTVLLVDELDILCNRRQDVVYNLLDWPTKSAAKLVVVTIANTMDLPERLLMGKVTSR 203 Query: 617 IGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPED 676 +G TR+ F Y+H++L+ I+ RL G +++F Sbjct: 204 LGLTRLTFQPYSHKQLQEIVTARLGG-SETF----------------------------- 233 Query: 677 VRKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAAEIAEKHYMAKHGYGYDGKTVIE 736 +A+++ +RKVA+VSGDARRAL +C+RA EIA Sbjct: 234 --------KGEAVQLVARKVAAVSGDARRALDICRRATEIA------------------- 266 Query: 737 DENEEQIYDDEDKDLIESNKAKDDNDDDDDNDGVQTVHITHVMKALNETLNSHVITFMTR 796 D V+ V + HV +AL E + S + + Sbjct: 267 -----------------------------DTAAVKCVTMLHVQQALAEMIASAKVQAIRN 297 Query: 797 LSFTAKLFIYALLNLMKKNGSQEQELGDIVDEIKLLIEVNGSNKFVMEIAKTLFQQGSDN 856 S ++F+ A+ + + G +E + +++ + G Sbjct: 298 CSRMEQIFLQAIAAEVTRTGVEETTFMGVYQQVETIAAFMGVTFP--------------P 343 Query: 857 ISEQLRIISWDFVLNQLLDAGILFKQTMKNDRICCVKLNISVEEAKRAMNEDETL 911 LR+ S +L ++ + +ND + LN+S ++ A+ +E + Sbjct: 344 PGRALRLCS------KLGAERLIISEHSRNDLFQKILLNVSADDIHYALRVEEMV 392 >2QBY-A nrPDB Length = 386 Score = 270 bits (689), Expect = 3e-72, Method: Composition-based stats. Identities = 86/322 (26%), Positives = 136/322 (42%), Gaps = 52/322 (16%) Query: 430 LNSSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTV 489 ++S ++ E L D LP RE++ I + I++ G G GKT Sbjct: 3 MSSIFINREYLLPDYIPDELPHREDQIRKIASILAPLYREEKPNNIFIYGLTGTGKTA-- 60 Query: 490 REVVKELLSSSAQREIPDFLYVEINGLKMVKPT----DCYETLWNKVSGERLTWAASMES 545 VVK +LS ++ + F +V IN ++ P D E+L KV L+ A E Sbjct: 61 --VVKFVLSKLHKKFLGKFKHVYINTRQIDTPYRVLADLLESLDVKVPFTGLSIA---EL 115 Query: 546 LEFYFKRVPKNKKKTIVVLLDELDAMVTK-SQDIMYNFFNWTTYEN-AKLIVIAVANTMD 603 K V ++ +V++LDE+DA V K + DI+Y + N +K+ I + N + Sbjct: 116 YRRLVKAV-RDYGSQVVIVLDEIDAFVKKYNDDILYKLSRINSEVNKSKISFIGITNDVK 174 Query: 604 LPERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAA 663 + L ++ S + I+F Y EEL++I+ R + + K G Sbjct: 175 FVD-LLDPRVKSSLSEEEIIFPPYNAEELEDILTKRAQ--------MAFKPG-------- 217 Query: 664 GNDTTVKQTLPEDVRKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAAEIAE--KHY 721 LP++V I++ + A GDARRAL + + + EIAE K Sbjct: 218 --------VLPDNV-----------IKLCAALAAREHGDARRALDLLRVSGEIAERMKDT 258 Query: 722 MAKHGYGYDGKTVIEDENEEQI 743 K Y Y K IE + I Sbjct: 259 KVKEEYVYMAKEEIERDRVRDI 280 >2V1U-A nrPDB Length = 387 Score = 259 bits (661), Expect = 5e-69, Method: Composition-based stats. Identities = 67/321 (20%), Positives = 129/321 (40%), Gaps = 47/321 (14%) Query: 431 NSSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVR 490 + + K +L D LP RE E + A+ + + + G G GKT R Sbjct: 3 SKIFRKRWVLLPDYVPDVLPHREAELRRLAEVLAPALRGEKPSNALLYGLTGTGKTAVAR 62 Query: 491 EVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERL--TWAASMESLEF 548 V++ L + ++ + + +N P + V G R+ T + E E Sbjct: 63 LVLRRLEARASSLGV-LVKPIYVNARHRETPYRVASAIAEAV-GVRVPFTGLSVGEVYER 120 Query: 549 YFKRVPKNKKKTIVVLLDELDAMVTK--SQDIMYNF--FNWTTYENAKLIVIAVANTMDL 604 KR+ + + I+V LDE+D + + QD++Y N + + ++ + N++ Sbjct: 121 LVKRLSRLRGIYIIV-LDEIDFLPKRPGGQDLLYRITRINQELGDRVWVSLVGITNSLGF 179 Query: 605 PERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAG 664 E L ++ S +G ++F YT +L++I++ R + ++F N ++D Sbjct: 180 VE-NLEPRVKSSLGEVELVFPPYTAPQLRDILETRAE---EAF--------NPGVLDP-- 225 Query: 665 NDTTVKQTLPEDVRKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAAEIA--EKHYM 722 D + + + A GDARRAL + + A EIA + Sbjct: 226 ----------------------DVVPLCAALAAREHGDARRALDLLRVAGEIAERRREER 263 Query: 723 AKHGYGYDGKTVIEDENEEQI 743 + + Y + IE + ++ Sbjct: 264 VRREHVYSARAEIERDRVSEV 284 >5V8F-9 nrPDB Length = 513 Score = 238 bits (608), Expect = 6e-63, Method: Composition-based stats. Identities = 91/463 (19%), Positives = 178/463 (38%), Gaps = 98/463 (21%) Query: 420 ETIFSKVKKQLNSSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAG 479 ++IF + K L S E++ + LPAR E+ + AI + ++Y+ G Sbjct: 52 QSIFLRTKALLQKS---SELVNLNSSDGALPARTAEYEQVMNFLAKAISEHRSDSLYITG 108 Query: 480 TPGVGKT----LTVREVVKEL-LSSSAQR------------------EIPD-----FLYV 511 PG GKT + +R+ + L LS S R E+PD Sbjct: 109 PPGTGKTAQLDMIIRQKFQSLPLSLSTPRSKDVLRHTNPNLQNLSWFELPDGRLESVAVT 168 Query: 512 EINGLKMVKPTDCYETLWNK---VSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDEL 568 IN + + +P+ ++ +++ ++G L +M+ L+ + + P +KK T VV+LDE+ Sbjct: 169 SINCISLGEPSSIFQKIFDSFQDLNGPTL-QIKNMQHLQKFLE--PYHKKTTFVVVLDEM 225 Query: 569 DAMVT------KSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIGFTR- 621 D ++ +S + F ++I +AN++D+ +R L SR+ R Sbjct: 226 DRLLHANTSETQSVRTILELFLLAKLPTVSFVLIGMANSLDMKDRFL-----SRLNLDRG 280 Query: 622 -----IMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPED 676 I+F YT E++ I+ ++ L T + Q + Sbjct: 281 LLPQTIVFQPYTAEQMYEIVIQKMSSL----------------------PTIIFQPM--- 315 Query: 677 VRKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAAEI--AEKHYMAKHGYGYDGKTV 734 AI+ A++K A +GD R+ V + + EI EK ++ G Sbjct: 316 -----------AIKFAAKKCAGNTGDLRKLFDVLRGSIEIYELEKRFLLSPTRGSLNSAQ 364 Query: 735 IE----DENEEQIYDDEDKDLIESNKAKDDNDDDDDNDGVQTVHITHVMKA--LNETLNS 788 + ++ Y + + + AK + ++N + ++ + L + S Sbjct: 365 VPLTPTTSPVKKSYPEPQGKIGLNYIAKVFSKFVNNNSTRTRIAKLNIQQKLILCTIIQS 424 Query: 789 HVITFMTRLSFTAKLFIYALLNLMKKNGSQEQELGDIVDEIKL 831 + + + +I A+ Q E +I ++ Sbjct: 425 LKLNSDATIDESFDHYIKAITKTDTLAPLQRNEFLEICTILET 467 >5UJ7-C nrPDB Length = 436 Score = 156 bits (395), Expect = 3e-38, Method: Composition-based stats. Identities = 51/284 (17%), Positives = 116/284 (40%), Gaps = 16/284 (5%) Query: 455 EFASIYLSAY-SAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEI 513 ++ + +A+ +S ++ + G G GKT+ + +KEL+ E + L V + Sbjct: 43 QYKHLSELLKRTALHGES-NSVLIIGPRGSGKTMLINHALKELMEIEEVSE--NVLQVHL 99 Query: 514 NGLKMVKPTDCYETLWNKVSGERL----TWAASMESLEFYFKRVPKNKKKT---IVVLLD 566 NGL + + + +++ E + + + E+L F + + K + + ++ +LD Sbjct: 100 NGLLQINDKIALKEITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILD 159 Query: 567 ELDAMV-TKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIGFTRI-MF 624 E D K+Q ++YN F+ + + VI + +D+ E L ++ SR +I + Sbjct: 160 EFDLFAHHKNQTLLYNLFDISQSAQTPIAVIGLTCRLDILE-LLEKRVKSRFSHRQIHLM 218 Query: 625 TGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPEDVRKVRLRM 684 + + I +L L F + D +V++ L + + Sbjct: 219 NSFGFPQYVKIFKEQL-SLPAEFPDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLR 277 Query: 685 SADAIEIASRKVASVSGDARRALKVCKRAAEIAEKHYMAKHGYG 728 S + + + + S A+ + + A+++ A +G Sbjct: 278 SLHMLLMLALNRVTASHPFMTAVDLME-ASQLCSMDSKANIVHG 320 >4XGC-D nrPDB Length = 459 Score = 114 bits (286), Expect = 1e-25, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 77/180 (42%), Gaps = 10/180 (5%) Query: 454 NEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEI 513 E +++ L E + ++ + G G GKT + V+ +LL + + L V + Sbjct: 31 KERSNVRLLLQRTAEMGESNSLLLLGPRGSGKTTLINSVLADLLP--NKSFGENTLIVHL 88 Query: 514 NGLKMVKPTDCYETLWNKVSGERL----TWAASMESLEFYFKRVPKNKK--KTIVVLLDE 567 +G +++ ++ E + + E+L F + + K K+++ +L+E Sbjct: 89 DGNLHTDDRVALKSITVQMQLENAADGKVFGSFAENLAFLLQCLKAGGKHSKSVIFILEE 148 Query: 568 LDAMV-TKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTG 626 D +Q ++YN F+ + A + V+ V +D+ E L ++ SR ++ Sbjct: 149 FDLFCAHHNQTLLYNLFDVSQSAQAPICVLGVTCRLDVIE-LLEKRVKSRFSHRQVFLFP 207 >2QBY-B nrPDB Length = 384 Score = 106 bits (264), Expect = 4e-23, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 111/305 (36%), Gaps = 48/305 (15%) Query: 439 ILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLS 498 + + +P RE+ ++ ++++ + G G GKT + + E+ Sbjct: 12 FIDPLSVFKEIPFREDILRDAAIAIRYFVKNEVKFSNLFLGLTGTGKTFVSKYIFNEIEE 71 Query: 499 -SSAQREIPDFLYVEINGLKM-VKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKN 556 E D +N ++ P +L K++G + +L Y ++ Sbjct: 72 VKKEDEEYKDVKQAYVNCREVGGTPQAVLSSLAGKLTGFSVP--KHGINLGEYIDKIKNG 129 Query: 557 -KKKTIVVLLDELDAMVTK--SQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKI 613 + ++ LDE+D +V + ++Y +A + VI ++N +++ + + ++ Sbjct: 130 TRNIRAIIYLDEVDTLVKRRGGDIVLYQLLR----SDANISVIMISNDINVRD-YMEPRV 184 Query: 614 TSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTL 673 S +G + ++F Y E+LK I+ + Sbjct: 185 LSSLGPS-VIFKPYDAEQLKFILSKYAE-------------------------------- 211 Query: 674 PEDVRKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAAEIAEKHYMAKHGYGYDGKT 733 ++ + + + A GDAR+A+ + RAA++A + + + Sbjct: 212 ---YGLIKGTYDDEILSYIAAISAKEHGDARKAVNLLFRAAQLASGGGIIRKEHVDKAIV 268 Query: 734 VIEDE 738 E E Sbjct: 269 DYEQE 273 >1FNN-A nrPDB Length = 389 Score = 70.6 bits (171), Expect = 3e-12, Method: Composition-based stats. Identities = 52/328 (15%), Positives = 114/328 (34%), Gaps = 52/328 (15%) Query: 432 SSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIE--SDSATTIYVAGTPGVGKTLTV 489 + V + + + LP RE + + + + + + G PG GKT+T+ Sbjct: 2 AIVVDDSVFSPSYVPKRLPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTL 61 Query: 490 REVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGE-RLTWAASMESLEF 548 R++ + + R V ING T + ++ + E L Sbjct: 62 RKLWELYKDKTTARF------VYINGFIYRNFTAIIGEIARSLNIPFPRRGLSRDEFLAL 115 Query: 549 YFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENA----KLIVIAVANTMDL 604 + + + +VL D + DI+ F + ++ ++ V + D Sbjct: 116 LVEHLRERDLYMFLVLDDAFNLAP----DILSTFIRLGQEADKLGAFRIALVIVGHN-DA 170 Query: 605 PERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAG 664 L +G I F+ YT +++ +I+ R K Sbjct: 171 VLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKA---------------------- 208 Query: 665 NDTTVKQTLPEDVRKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAAEIAEKHYMAK 724 + + ED+ ++ ++ + + GDAR A+ + R+A A+++ Sbjct: 209 --GLAEGSYSEDILQMIADITGAQTPL-----DTNRGDARLAIDILYRSAYAAQQN---- 257 Query: 725 HGYGYDGKTVIEDENEEQIYDDEDKDLI 752 G + + ++E ++ ++ LI Sbjct: 258 -GRKHIAPEDVRKSSKEVLFGISEEVLI 284 >5V8F-D nrPDB Length = 529 Score = 67.2 bits (162), Expect = 3e-11, Method: Composition-based stats. Identities = 40/244 (16%), Positives = 86/244 (35%), Gaps = 41/244 (16%) Query: 425 KVKKQLNSSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVG 484 ++ +QL + +E + QD + E I +I + ++ + G Sbjct: 55 RLLQQLYGTLPTDEKIIFTYLQDC----QQEIDRI---IKQSIIQKESHSVILVGPRQSY 107 Query: 485 KTLTVREVVKELLSSSAQREIPD-------FLYVEINGL------KMVKPTDCYETLWNK 531 KT + + L S ++ I ING+ ++ K E + + Sbjct: 108 KTYLLDYELSLLQQSYKEQFITIRLNGFIHSEQTAINGIATQLEQQLQKIHGSEEKIDDT 167 Query: 532 VSGERLTWAASMESLEFYFKRVPKNKKK----------------TIVVLLDELDAMVTK- 574 S E ++ + E E + K T+V + DE+D Sbjct: 168 -SLETISSGSLTEVFEKILLLLDSTTKTRNEDSGEVDRESITKITVVFIFDEIDTFAGPV 226 Query: 575 SQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTGYTHEELKN 634 Q ++YN F+ + + + +++ E L ++ SR R+++ + L + Sbjct: 227 RQTLLYNLFDMVEHSRVPVCIFGCTTKLNILE-YLEKRVKSRFS-QRVIYMP-QIQNLDD 283 Query: 635 IIDL 638 ++D Sbjct: 284 MVDA 287 >1W5T-A nrPDB Length = 412 Score = 59.1 bits (141), Expect = 9e-09, Method: Composition-based stats. Identities = 52/329 (15%), Positives = 109/329 (33%), Gaps = 51/329 (15%) Query: 426 VKKQLNSSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSA----TTIY-VAGT 480 +K + + + L R E ++ + + S + IY G Sbjct: 1 MKVLRHGLFKDRRVFDENYIPPELRVRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGR 60 Query: 481 PGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGE-RLTW 539 G+GKT + VK + ++A+ + +N + + ++ Sbjct: 61 VGIGKTTLAKFTVKRVSEAAAKEGL-TVKQAYVNAFNAPNLYTILSLIVRQTGYPIQVRG 119 Query: 540 AASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTK---SQDIMYNFFN----WTTYENA- 591 A +++ L+ + + ++V+LDE +M++ + + +Y + + Sbjct: 120 APALDILKALVDNL-YVENHYLLVILDEFQSMLSSPRIAAEDLYTLLRVHEEIPSRDGVN 178 Query: 592 KLIVIAVANTMDLPERQLG--NKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFY 649 ++ + VA+ + ++ S+IGF ++ Y EL I++ R + Sbjct: 179 RIGFLLVASDVRALSYMREKIPQVESQIGF-KLHLPAYKSRELYTILEQRAE-------- 229 Query: 650 VDTKTGNAILIDAAGNDTTVKQTLPEDVRKVRLRMSADAIEIASRKVASVSGDARRALKV 709 G + + + ED G ARRA+ Sbjct: 230 ----LGLRDTVWEPRHLELISDVYGEDKGGD--------------------GSARRAIVA 265 Query: 710 CKRAAEIAEKHYMAKHGYGYDGKTVIEDE 738 K A E+AE K V E+E Sbjct: 266 LKMACEMAEAMGRDSLSEDLVRKAVSENE 294 >4XGC-E nrPDB Length = 460 Score = 52.5 bits (124), Expect = 7e-07, Method: Composition-based stats. Identities = 47/327 (14%), Positives = 100/327 (30%), Gaps = 29/327 (8%) Query: 443 ANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQ 502 ++ + P RE ++ + IY+ G G GKT R +KE Sbjct: 6 SSLEPLFPCREAAIETLGE-LIGDSSETYPSAIYLFGHSGTGKTALTRAFLKECGKRQ-- 62 Query: 503 REIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEF----YFKRVPKNKK 558 + +N ++ E L + ++ ++ L+F + + + Sbjct: 63 ----NVRTAHLNAIECYTTKIMLEILLDSLAPDQGDALKVDNMLDFVEQLRRQAATRVED 118 Query: 559 KTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIG 618 + ++ +D + + +++ N L VI L + K ++ G Sbjct: 119 QGFLIAVDNAERLRDMDANVLPVLLRLQELTNLNLCVI-------LLSQLPFEKFYNKTG 171 Query: 619 FTRIM---FTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPE 675 + I+ Y E + I+ + + + + + I Sbjct: 172 LSEIVCLHLAQYNKAETQRILGSDFQQVRNQLLEQFAQDKKRLEICQEAVTEDFYNNYLN 231 Query: 676 DVRKVRLRMSADA--IEIASRKVASVSGD-----ARRALKVCKRAAEIA-EKHYMAKHGY 727 V + D +++ +RK S + A + + IA Y Sbjct: 232 LFLSVFYKACRDVPELQLTARKCLSTYLEPVLDGTVDATDISRLWRHIAGPLRSALTQIY 291 Query: 728 GYDGKTVIEDENEEQIYDDEDKDLIES 754 K E E+ I D + L +S Sbjct: 292 MRIEKPAEEVEDFTAIEDQSVRKLAQS 318 >5UJM-E nrPDB Length = 435 Score = 47.9 bits (112), Expect = 2e-05, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 79/207 (38%), Gaps = 32/207 (15%) Query: 444 NFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQR 503 + ++ + RE++ SI S + S +I++ G GKT + ++K L Sbjct: 3 HLENVVLCRESQV-SILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTL------- 54 Query: 504 EIPDFLYVEINGLKMVKPTDCYETLWNKVSG-----ERLTWAASMESLEFYFKRVPK--- 555 E+P +V +N ++ E + NK++ + + + E+ + + + Sbjct: 55 ELP---HVFVNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTT 111 Query: 556 ---NKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNK 612 K +T+ ++LD+ + + +++ F + + V+ + K Sbjct: 112 AENLKDQTVYIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVL-------FLSEIVWEK 164 Query: 613 ITSRIGFTR---IMFTGYTHEELKNII 636 G + F Y+ L+ I+ Sbjct: 165 FRPNTGCFEPFVLYFPDYSIGNLQKIL 191 >5UJ7-E nrPDB Length = 284 Score = 47.9 bits (112), Expect = 2e-05, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 79/207 (38%), Gaps = 32/207 (15%) Query: 444 NFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQR 503 + ++ + RE++ SI S + S +I++ G GKT + ++K L Sbjct: 3 HLENVVLCRESQV-SILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTL------- 54 Query: 504 EIPDFLYVEINGLKMVKPTDCYETLWNKVSG-----ERLTWAASMESLEFYFKRVPK--- 555 E+P +V +N ++ E + NK++ + + + E+ + + + Sbjct: 55 ELP---HVFVNCVECFTLRLLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTT 111 Query: 556 ---NKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNK 612 K +T+ ++LD+ + + +++ F + + V+ + K Sbjct: 112 AENLKDQTVYIVLDKAEYLRDMEANLLPGFLRLQELADRNVTVL-------FLSEIVWEK 164 Query: 613 ITSRIGFTR---IMFTGYTHEELKNII 636 G + F Y+ L+ I+ Sbjct: 165 FRPNTGCFEPFVLYFPDYSIGNLQKIL 191 >5VHO-F nrPDB Length = 267 Score = 47.1 bits (110), Expect = 3e-05, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 65/190 (34%), Gaps = 44/190 (23%) Query: 470 DSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLW 529 + + G PG GKTL R + ++ + P + + I Sbjct: 53 QPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIG--------------- 97 Query: 530 NKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS-----------QDI 578 G +L A + E K ++ +DELDA+ TK Q Sbjct: 98 ---DGAKLVRDAFALAKE----------KAPSIIFIDELDAIGTKRFDSEKAGDREVQRT 144 Query: 579 MYNFFNWTTY--ENAKLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNII 636 M N N ++ VIA N +D+ + L + R+ +I F E I+ Sbjct: 145 MLELLNQLDGFQPNTQVKVIAATNRVDILDPALLR--SGRLD-RKIEFPMPNEEARARIM 201 Query: 637 DLRLKGLNDS 646 + + +N S Sbjct: 202 QIHSRKMNVS 211 >5VFP-F nrPDB Length = 396 Score = 46.4 bits (108), Expect = 6e-05, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 64/190 (33%), Gaps = 44/190 (23%) Query: 470 DSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLW 529 + + G PG GKTL R + ++ + P + + I Sbjct: 175 QPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIG--------------- 219 Query: 530 NKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS-----------QDI 578 G +L A + E K ++ +DELDA+ TK Q Sbjct: 220 ---DGAKLVRDAFALAKE----------KAPSIIFIDELDAIGTKRFDSEKAGDREVQRT 266 Query: 579 MYNFFNWTTY--ENAKLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNII 636 M N N ++ VIA N +D+ + L + S +I F E I+ Sbjct: 267 MLELLNQLDGFQPNTQVKVIAATNRVDILDPAL---LRSGRLDRKIEFPMPNEEARARIM 323 Query: 637 DLRLKGLNDS 646 + + +N S Sbjct: 324 QIHSRKMNVS 333 >6EPD-M nrPDB Length = 442 Score = 45.6 bits (106), Expect = 9e-05, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 64/190 (33%), Gaps = 44/190 (23%) Query: 470 DSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLW 529 + + G PG GKTL R + ++ + P + + I Sbjct: 221 QPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIG--------------- 265 Query: 530 NKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS-----------QDI 578 G +L A + E K ++ +DELDA+ TK Q Sbjct: 266 ---DGAKLVRDAFALAKE----------KAPSIIFIDELDAIGTKRFDSEKAGDREVQRT 312 Query: 579 MYNFFNWTTY--ENAKLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNII 636 M N N ++ VIA N +D+ + L + S +I F E I+ Sbjct: 313 MLELLNQLDGFQPNTQVKVIAATNRVDILDPAL---LRSGRLDRKIEFPMPNEEARARIM 369 Query: 637 DLRLKGLNDS 646 + + +N S Sbjct: 370 QIHSRKMNVS 379 >5C18-A nrPDB Length = 785 Score = 45.2 bits (105), Expect = 1e-04, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 70/194 (36%), Gaps = 50/194 (25%) Query: 436 KEEILKSANFQDYLPARENEFASIYLS---------AYSAIESDSATTIYVAGTPGVGKT 486 +EE L + D R+ + A I + AI I + G PG GKT Sbjct: 193 EEESLNEVGYDDIGGCRK-QLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKT 251 Query: 487 LTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESL 546 L R V E F ++ ING + +K++GE + +L Sbjct: 252 LIARAV---------ANETGAFFFL-ING----------PEIMSKLAGESES------NL 285 Query: 547 EFYFKRVPKNKKKTIVVLLDELDAMVTKSQDI-----------MYNFFNWTTYENAKLIV 595 F+ KN ++ +DELDA+ K + + + + A +IV Sbjct: 286 RKAFEEAEKN--APAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMD-GLKQRAHVIV 342 Query: 596 IAVANTMDLPERQL 609 +A N + + L Sbjct: 343 MAATNRPNSIDPAL 356 >3HU1-A nrPDB Length = 489 Score = 45.2 bits (105), Expect = 1e-04, Method: Composition-based stats. Identities = 43/194 (22%), Positives = 70/194 (36%), Gaps = 50/194 (25%) Query: 436 KEEILKSANFQDYLPARENEFASIYLS---------AYSAIESDSATTIYVAGTPGVGKT 486 +EE L + D R+ + A I + AI I + G PG GKT Sbjct: 194 EEESLNEVGYDDIGGCRK-QLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKT 252 Query: 487 LTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESL 546 L R V E F ++ ING + +K++GE + +L Sbjct: 253 LIARAV---------ANETGAFFFL-ING----------PEIMSKLAGESES------NL 286 Query: 547 EFYFKRVPKNKKKTIVVLLDELDAMVTKSQDI-----------MYNFFNWTTYENAKLIV 595 F+ KN ++ +DELDA+ K + + + + A +IV Sbjct: 287 RKAFEEAEKN--APAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMD-GLKQRAHVIV 343 Query: 596 IAVANTMDLPERQL 609 +A N + + L Sbjct: 344 MAATNRPNSIDPAL 357 >5VHP-C nrPDB Length = 266 Score = 45.2 bits (105), Expect = 1e-04, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 68/212 (32%), Gaps = 51/212 (24%) Query: 448 YLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPD 507 LP + E + A+ + + G PG GKTL R V D Sbjct: 37 ELPVKHPE-------LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH----------TD 79 Query: 508 FLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDE 567 ++ ++G L K GE + + + P ++ +DE Sbjct: 80 CTFIRVSG----------SELVQKFIGEGARMVRELFVMAR--EHAPS------IIFMDE 121 Query: 568 LDAMVTKS-----------QDIMYNFFNW--TTYENAKLIVIAVANTMDLPERQLGNKIT 614 +D++ + Q M N + VI N +D+ + L Sbjct: 122 IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLR--P 179 Query: 615 SRIGFTRIMFTGYTHEELKNIIDLRLKGLNDS 646 RI +I F E +I+ + + +N + Sbjct: 180 GRID-RKIEFPPPNEEARLDILKIHSRKMNLT 210 >5M32-h nrPDB Length = 355 Score = 45.2 bits (105), Expect = 1e-04, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 68/212 (32%), Gaps = 51/212 (24%) Query: 448 YLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPD 507 LP + E + A+ + + G PG GKTL R V D Sbjct: 129 ELPVKHPE-------LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH----------TD 171 Query: 508 FLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDE 567 ++ ++G L K GE + + + P ++ +DE Sbjct: 172 CTFIRVSG----------SELVQKFIGEGARMVRELFVMAR--EHAPS------IIFMDE 213 Query: 568 LDAMVTKS-----------QDIMYNFFNW--TTYENAKLIVIAVANTMDLPERQLGNKIT 614 +D++ + Q M N + VI N +D+ + L Sbjct: 214 IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLR--P 271 Query: 615 SRIGFTRIMFTGYTHEELKNIIDLRLKGLNDS 646 RI +I F E +I+ + + +N + Sbjct: 272 GRID-RKIEFPPPNEEARLDILKIHSRKMNLT 302 >5GJQ-J nrPDB Length = 406 Score = 44.8 bits (104), Expect = 1e-04, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 68/212 (32%), Gaps = 51/212 (24%) Query: 448 YLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPD 507 LP + E + A+ + + G PG GKTL R V D Sbjct: 166 ELPVKHPE-------LFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH----------TD 208 Query: 508 FLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDE 567 ++ ++G L K GE + + + P ++ +DE Sbjct: 209 CTFIRVSG----------SELVQKFIGEGARMVRELFVMAR--EHAPS------IIFMDE 250 Query: 568 LDAMVTKS-----------QDIMYNFFNW--TTYENAKLIVIAVANTMDLPERQLGNKIT 614 +D++ + Q M N + VI N +D+ + L Sbjct: 251 IDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLR--P 308 Query: 615 SRIGFTRIMFTGYTHEELKNIIDLRLKGLNDS 646 RI +I F E +I+ + + +N + Sbjct: 309 GRID-RKIEFPPPNEEARLDILKIHSRKMNLT 339 >6E11-1 nrPDB Length = 906 Score = 44.8 bits (104), Expect = 2e-04, Method: Composition-based stats. Identities = 51/325 (15%), Positives = 112/325 (34%), Gaps = 41/325 (12%) Query: 452 RENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYV 511 R+ E +I S + + + + V G PG GKT V +V + +E+ + + Sbjct: 212 RDEEIRAIIESL---LRYNKNSPVLV-GNPGTGKTTIVEGLVYRIEKGDVPKELQGYTVI 267 Query: 512 EINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAM 571 +N K ++ E+ + KNKK I++ +DE+ + Sbjct: 268 SLNFRKFTS---------------GTSYRGEFETRMKNIIKELKNKKNKIILFVDEIHLL 312 Query: 572 VTKSQ----DIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTGY 627 + + N ++ +I A T+ + + + F +I+ Sbjct: 313 LGAGKAEGGTDAANLLK-PVLSKGEIKLIG-ATTIAEYRKFIESCSAFERRFEKILVEPP 370 Query: 628 THEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPEDVRKVRLRMSAD 687 + + I+ LK ++F+ ++ + + + LP+ + Sbjct: 371 SVDMTVKILRS-LKSKYENFYGINITDKALVAAAKISDRFIKDRYLPDKAIDLLN----- 424 Query: 688 AIEIASRKVASVSGDAR----RALKVCKRAAEIA----EKHYMAKHGYGYDGKTVIEDEN 739 + S +SG R + + + EI+ + ++K Y K E + Sbjct: 425 --KACSFLQVQLSGKPRIIDVTERDIERLSYEISTLEKDVDKVSKKKYNKLIKEFEEKKE 482 Query: 740 EEQIYDDEDKDLIESNKAKDDNDDD 764 + + Y +E E K K + + Sbjct: 483 QLKKYYEEYVITGERLKRKKEIEKK 507 >5VC7-A nrPDB Length = 564 Score = 44.4 bits (103), Expect = 2e-04, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 42/150 (28%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNK 531 + + G PG GKTL R V E S + Sbjct: 43 PKGVILYGPPGTGKTLIARAVANE----SGANFL-------------------------S 73 Query: 532 VSGERLTWAASMESLEFYFKRVPKNKKKT-IVVLLDELDAMVTKSQDI-----------M 579 ++G + +S + + K ++ ++ +DE+D++ K +++ + Sbjct: 74 INGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQGEVERRVVAQL 133 Query: 580 YNFFNWTTYENAKLIVIAVANTMDLPERQL 609 + E +IVI N +D + L Sbjct: 134 LTLMD-GMKERGHVIVIGATNRIDAIDPAL 162 >6EF0-M nrPDB Length = 258 Score = 44.4 bits (103), Expect = 2e-04, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 77/244 (31%), Gaps = 46/244 (18%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNK 531 + G PG GKTL R + ++ + P + + I Sbjct: 40 PKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIG----------------- 82 Query: 532 VSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS-----------QDIMY 580 G +L A + E K ++ +DELDA+ TK Q M Sbjct: 83 -EGAKLVRDAFALAKE----------KAPTIIFIDELDAIGTKRFDSEKSGDREVQRTML 131 Query: 581 NFFNWTTYENA--KLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNIID- 637 N ++ ++ V+A N +D+ + L + R+ +I F + + I+ Sbjct: 132 ELLNQLDGFSSDDRVKVLAATNRVDVLDPALLR--SGRLD-RKIEFPLPSEDSRAQILQI 188 Query: 638 -LRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPEDVRKVRLRMSADAIEIASRKV 696 R +D + + A TV+ + D +E S Sbjct: 189 HSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQ 248 Query: 697 ASVS 700 A S Sbjct: 249 ARKS 252 >6MCK-A nrPDB Length = 606 Score = 44.4 bits (103), Expect = 2e-04, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 40/158 (25%) Query: 463 AYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPT 522 + AI I + G PG GKTL R V E F ++ ING Sbjct: 21 LFKAIGVKPPRGILLYGPPGTGKTLIARAV---------ANETGAFFFL-ING------- 63 Query: 523 DCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDI---- 578 + +K++GE + +L F+ KN ++ +DELDA+ K + Sbjct: 64 ---PEIMSKLAGESES------NLRKAFEEAEKN--APAIIFIDELDAIAPKREKTHGEV 112 Query: 579 -------MYNFFNWTTYENAKLIVIAVANTMDLPERQL 609 + + + A +IV+A N + + L Sbjct: 113 ERRIVSQLLTLMD-GLKQRAHVIVMAATNRPNSIDPAL 149 >1SXJ-C nrPDB Length = 340 Score = 44.1 bits (102), Expect = 3e-04, Method: Composition-based stats. Identities = 42/319 (13%), Positives = 102/319 (31%), Gaps = 47/319 (14%) Query: 430 LNSSYVKEEILKSANFQDYLPARENEF---ASIYLSAYSAIESDSATTIYVAGTPGVGKT 486 +++S K + Y P +E + + ++ + G PG GKT Sbjct: 1 MSTSTEKRSKENLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKT 60 Query: 487 LTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESL 546 T+ + +E+ + + +E+N + + R + Sbjct: 61 STIVALAREIYGKNYSN-----MVLELNA-----------SDDRGIDVVRNQIKDFASTR 104 Query: 547 EFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVANTMD--- 603 + + K +++LDE DAM +Q+ + T ++ A+ + Sbjct: 105 QIFSKGFK-------LIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPAL 157 Query: 604 -----------LPERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDT 652 LP+ + +I + + ++ + + L + + ++ + + Sbjct: 158 LSQCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKA 217 Query: 653 KTGNAILIDAAGN--DTTVKQTLPEDVRKVRLRMSAD---AIEIASRKVASVSGDARRAL 707 N + + + P D++ V + D KV S G A + Sbjct: 218 TLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLA--LI 275 Query: 708 KVCKRAAEIAEKHYMAKHG 726 + + +I E + + Sbjct: 276 DLIEGIVKILEDYELQNEE 294 >5G4G-A nrPDB Length = 721 Score = 44.1 bits (102), Expect = 3e-04, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 42/150 (28%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNK 531 + + G PG GKTL R V E S + Sbjct: 219 PKGVILYGPPGTGKTLIARAVANE----SGANFL-------------------------S 249 Query: 532 VSGERLTWAASMESLEFYFKRVPKNKKKT-IVVLLDELDAMVTKSQDI-----------M 579 ++G + +S + + K ++ ++ +DE+D++ K +++ + Sbjct: 250 INGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEVQGEVERRVVAQL 309 Query: 580 YNFFNWTTYENAKLIVIAVANTMDLPERQL 609 + E +IVI N +D + L Sbjct: 310 LTLMD-GMKERGHVIVIGATNRIDAIDPAL 338 >6MDP-A nrPDB Length = 768 Score = 44.1 bits (102), Expect = 3e-04, Method: Composition-based stats. Identities = 35/148 (23%), Positives = 53/148 (35%), Gaps = 33/148 (22%) Query: 475 IYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSG 534 I + G PG GKTL R++ K L + P +NG + NK G Sbjct: 280 ILLYGPPGCGKTLLARQIGKMLNARE-----PKV----VNG----------PEILNKYVG 320 Query: 535 ER-LTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS---------QDIMYN--F 582 E E +R+ N I+ + DE+DA+ + D + N Sbjct: 321 ESEANIRKLFADAEEEQRRLGANSGLHII-IFDEIDAICKQRGSMAGSTGVHDTVVNQLL 379 Query: 583 FNWTTYENA-KLIVIAVANTMDLPERQL 609 E ++VI + N DL + L Sbjct: 380 SKIDGVEQLNNILVIGMTNRPDLIDEAL 407 >1G8P-A nrPDB Length = 350 Score = 43.7 bits (101), Expect = 4e-04, Method: Composition-based stats. Identities = 49/319 (15%), Positives = 96/319 (30%), Gaps = 40/319 (12%) Query: 473 TTIYVAGTPGVGKTLTVREVVKELLSSSAQRE----------IPDFLYV-EINGLKMVKP 521 + V G G GK+ VR + L A IPD+ V N ++ P Sbjct: 46 GGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTP 105 Query: 522 TDCYETLWNKVSGERLTWAASMESL----EFYFKRVPKNKKKTIVVLLDELDAMVTKSQD 577 L VS +R+ A +E E F+ + + +DE + + D Sbjct: 106 ---VVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVD 162 Query: 578 IMYNFFN----------WTTYENAKLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTGY 627 ++ + + A+ +++ N E L ++ R G + + + Sbjct: 163 LLLDVAQSGENVVERDGLSIRHPARFVLVGSGNP---EEGDLRPQLLDRFGLSVEVLSPR 219 Query: 628 THEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPEDVRKVRLRMSAD 687 E +I R D + + Q L R ++ Sbjct: 220 DVETRVEVIRRR--------DTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNT 271 Query: 688 AIEIASRKVASVSGD-ARRALKVCKRAAEIAEKHYMAKHGYGYDGKTVIEDENEEQIYDD 746 A+ + ++ D R L + + A +A G + + + D Sbjct: 272 ALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRRDP 331 Query: 747 EDKDLIESNKAKDDNDDDD 765 D+ + A+ + Sbjct: 332 LDEAGSTARVARTVEETLP 350 >5KWA-A nrPDB Length = 497 Score = 42.9 bits (99), Expect = 7e-04, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 55/165 (33%), Gaps = 24/165 (14%) Query: 455 EFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEIN 514 E ++ Y + + G PG GKTL + V L A+ D + Sbjct: 164 ELPFLHKELYREYSLRPPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSY 223 Query: 515 GLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELD-AMVT 573 L + P L NK GE L F R ++ ++V DE+D T Sbjct: 224 FLNIKGP-----ELLNKFVGETERHIR----LIFQRAREKASEGTPVIVFFDEMDSIFRT 274 Query: 574 KSQ------------DIMYNFFNWTTYENAKLIVIAVANTMDLPE 606 + ++ EN +IVI +N D+ + Sbjct: 275 RGTGVSSDVETTVVPQLLSEIDGVEGLEN--VIVIGASNREDMID 317 >3M6A-A nrPDB Length = 543 Score = 42.5 bits (98), Expect = 9e-04, Method: Composition-based stats. Identities = 57/256 (22%), Positives = 93/256 (36%), Gaps = 44/256 (17%) Query: 460 YLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMV 519 YL+ +S + +AG PGVGKT + + K L F+ + + G++ Sbjct: 96 YLAVQKLTKSLKGPILCLAGPPGVGKTSLAKSIAKSLGRK--------FVRISLGGVRDE 147 Query: 520 KPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVT--KSQ- 576 ++ G R T+ +M + + K K V LLDE+D M + + Sbjct: 148 S----------EIRGHRRTYVGAMPG--RIIQGMKKAGKLNPVFLLDEIDKMSSDFRGDP 195 Query: 577 -DIMYNFFN------------WTTYENAKLIVIAVANTMDLPERQLGNKITSRIGFTRIM 623 M + T++ +K++ IA AN + L +++ I Sbjct: 196 SSAMLEVLDPEQNSSFSDHYIEETFDLSKVLFIATANNLATIPGPLRDRM------EIIN 249 Query: 624 FTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPEDVRKVRLR 683 GYT E I+ L L K N L D A D T VR + + Sbjct: 250 IAGYTEIEKLEIVKDHL--LPKQIKEHGLKKSNLQLRDQAILDIIRYYTREAGVRSLERQ 307 Query: 684 MSADAIEIASRKVASV 699 ++A + A VA Sbjct: 308 LAAICRKAAKAIVAEE 323 >5A5B-M nrPDB Length = 434 Score = 42.5 bits (98), Expect = 0.001, Method: Composition-based stats. Identities = 44/244 (18%), Positives = 76/244 (31%), Gaps = 46/244 (18%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNK 531 + G PG GKTL R + ++ + P + + I Sbjct: 215 PKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIG----------------- 257 Query: 532 VSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS-----------QDIMY 580 G +L A + E K ++ +DELDA+ TK Q M Sbjct: 258 -EGAKLVRDAFALAKE----------KAPTIIFIDELDAIGTKRFDSEKSGDREVQRTML 306 Query: 581 NFFNWTTYENA--KLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNIID- 637 N ++ ++ V+A N +D+ + L + S +I F + + I+ Sbjct: 307 ELLNQLDGFSSDDRVKVLAATNRVDVLDPAL---LRSGRLDRKIEFPLPSEDSRAQILQI 363 Query: 638 -LRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPEDVRKVRLRMSADAIEIASRKV 696 R +D + + A TV+ + D +E S Sbjct: 364 HSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQ 423 Query: 697 ASVS 700 A S Sbjct: 424 ARKS 427 >1IN6-A nrPDB Length = 334 Score = 42.1 bits (97), Expect = 0.001, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 68/209 (32%), Gaps = 29/209 (13%) Query: 438 EILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELL 497 + L+ + +++ + + + + + +AG PG+G+T + EL Sbjct: 17 QFLRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGRTTLAHIIASELQ 76 Query: 498 SSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNK 557 ++ P +K +L + + + L + + + Sbjct: 77 TNIHVTSGPVL-------VKQGDMAAILTSLERG----DVLFIDEIHRLNKAVEELLYSA 125 Query: 558 KKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRI 617 + ++D M+ K + ++ L L + + SR Sbjct: 126 IEDF-----QIDIMIGKGPSAKSIRIDIQ-----PFTLVGATTRSGL----LSSPLRSRF 171 Query: 618 GFT-RIMFTGYTHEELKNIIDLRLKGLND 645 G + F YT +ELK II R L D Sbjct: 172 GIILELDF--YTVKELKEII-KRAASLMD 197 >6CHS-H nrPDB Length = 819 Score = 42.1 bits (97), Expect = 0.001, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 63/173 (36%), Gaps = 47/173 (27%) Query: 448 YLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPD 507 LP R + + +I + + G PG GKT L++ + E Sbjct: 237 ELPLRHPQ-------LFKSIGIKPPRGVLLYGPPGTGKT---------LMARAVANETGA 280 Query: 508 FLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDE 567 F ++ ING + +K++GE + +L F+ KN ++ +DE Sbjct: 281 FFFL-ING----------PEIMSKMAGESES------NLRKAFEEAEKN--SPAIIFIDE 321 Query: 568 LDAMVTKSQDI-----------MYNFFNWTTYENAKLIVIAVANTMDLPERQL 609 +D++ K + + + + ++V+A N + + L Sbjct: 322 IDSIAPKREKTNGEVERRVVSQLLTLMD-GMKARSNVVVMAATNRPNSIDPAL 373 Score = 33.3 bits (74), Expect = 0.56, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 48/166 (28%), Gaps = 47/166 (28%) Query: 475 IYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSG 534 + G PG GKT+ + V E ++ + V G Sbjct: 531 VLFYGPPGTGKTMLAKAVANECAAN-----------------------------FISVKG 561 Query: 535 ERLTWAASMESLEFYFKRVPKNKKKT-IVVLLDELDAMVT-----------KSQDIMYNF 582 L ES K + VV LDELD++ S ++ Sbjct: 562 PELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKARGGSIGDAGGASDRVVNQL 621 Query: 583 FNWTTYENAK--LIVIAVANTMDLPERQLGNKITSRIGFTRIMFTG 626 +K + VI N PE QL + ++++ Sbjct: 622 LTEMDGMTSKKNVFVIGATNR---PE-QLDPALCRPGRLDQLIYVP 663 >6HE4-H nrPDB Length = 267 Score = 41.4 bits (95), Expect = 0.002, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 72/245 (29%), Gaps = 51/245 (20%) Query: 470 DSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLW 529 + + + G PG GKTL + V N + Sbjct: 51 EPPKGVLLYGPPGTGKTLLAKAV--------------------ANQTRATFIRVVGSEFV 90 Query: 530 NKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS-----------QDI 578 K GE E + ++ P ++ +DELDA+ + Q Sbjct: 91 QKYIGEGARLVR--EVFQLAKEKAPS------IIFIDELDAIAARRTNSDTSGDREVQRT 142 Query: 579 MYNFFNWTTY--ENAKLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTGY-THE---EL 632 M + VI N +D+ L I F RI+ T E ++ Sbjct: 143 MMQLLAELDGFDPRGDVKVIGATNRIDI----LDPAILRPGRFDRIIEVPLPTFEGRIQI 198 Query: 633 KNIIDLRLKGLNDSFFYVDTK--TGNAILIDAAGNDTTVKQTLPEDVRKVRLRMSADAIE 690 I ++K D F + G + A + E+ KV + AIE Sbjct: 199 FKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIE 258 Query: 691 IASRK 695 +K Sbjct: 259 KVLKK 263 >6EF2-J nrPDB Length = 262 Score = 40.6 bits (93), Expect = 0.003, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 71/214 (33%), Gaps = 55/214 (25%) Query: 448 YLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPD 507 LP + E + ++ + + G PG GKTL R V D Sbjct: 22 ELPVKHPE-------LFESLGIAQPKGVILYGPPGTGKTLLARAVAHH----------TD 64 Query: 508 FLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDE 567 ++ ++G L K GE + + + P ++ +DE Sbjct: 65 CKFIRVSG----------AELVQKYIGEGSRMVRELFVMAR--EHAPS------IIFMDE 106 Query: 568 LDAMVTKS-----------QDIMYNFFNW----TTYENAKLIVIAVANTMDLPERQLGNK 612 +D++ + Q M N T +N K+I+ N +D+ + L Sbjct: 107 IDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMA--TNRLDILDPALLR- 163 Query: 613 ITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDS 646 RI +I F + I+ + + +N + Sbjct: 164 -PGRID-RKIEFPPPSVAARAEILRIHSRKMNLT 195 >6EF1-K nrPDB Length = 276 Score = 40.6 bits (93), Expect = 0.003, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 56/172 (32%), Gaps = 42/172 (24%) Query: 452 REN-EFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLY 510 RE E + Y I D + + G PG GKT+ V+ V + + Sbjct: 33 REAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKA----------AF 82 Query: 511 VEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDA 570 + +NG + V G R+ + + P ++ +DE+D+ Sbjct: 83 IRVNGSEFVHKYLG--------EGPRMV----RDVFRLARENAPS------IIFIDEVDS 124 Query: 571 MVTKS-----------QDIMYNFFNWTTY--ENAKLIVIAVANTMDLPERQL 609 + TK Q I+ ++ + VI N D + L Sbjct: 125 IATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPAL 176 >3H4M-A nrPDB Length = 285 Score = 40.6 bits (93), Expect = 0.004, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 48/157 (30%), Gaps = 41/157 (26%) Query: 463 AYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPT 522 + + + I + G PG GKTL + V E N + Sbjct: 42 LFEKVGIEPPKGILLYGPPGTGKTLLAKAV-----------------ATETNATFI---R 81 Query: 523 DCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS------- 575 L K GE + + L +K ++ +DE+DA+ K Sbjct: 82 VVGSELVKKFIGEGASLVKDIFKLAK--------EKAPSIIFIDEIDAIAAKRTDALTGG 133 Query: 576 ----QDIMYNFFNWTTYENAK--LIVIAVANTMDLPE 606 Q + +A+ + +I N D+ + Sbjct: 134 DREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILD 170 >6HE9-H nrPDB Length = 390 Score = 40.2 bits (92), Expect = 0.004, Method: Composition-based stats. Identities = 45/245 (18%), Positives = 72/245 (29%), Gaps = 51/245 (20%) Query: 470 DSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLW 529 + + + G PG GKTL + V N + Sbjct: 165 EPPKGVLLYGPPGTGKTLLAKAV--------------------ANQTRATFIRVVGSEFV 204 Query: 530 NKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS-----------QDI 578 K GE E + ++ P ++ +DELDA+ + Q Sbjct: 205 QKYIGEGARLVR--EVFQLAKEKAPS------IIFIDELDAIAARRTNSDTSGDREVQRT 256 Query: 579 MYNFFNWTTY--ENAKLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTGY-THE---EL 632 M + VI N +D+ L I F RI+ T E ++ Sbjct: 257 MMQLLAELDGFDPRGDVKVIGATNRIDI----LDPAILRPGRFDRIIEVPLPTFEGRIQI 312 Query: 633 KNIIDLRLKGLNDSFFYVDTK--TGNAILIDAAGNDTTVKQTLPEDVRKVRLRMSADAIE 690 I ++K D F + G + A + E+ KV + AIE Sbjct: 313 FKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIE 372 Query: 691 IASRK 695 +K Sbjct: 373 KVLKK 377 >6BLB-A nrPDB Length = 355 Score = 40.2 bits (92), Expect = 0.004, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 87/300 (29%), Gaps = 32/300 (10%) Query: 457 ASIYLSAYSAI-ESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEING 515 + L ++A ++ + G PG+GKT + +E+ S P Sbjct: 43 EQMELFIHAARGRQEALDHTLIFGPPGLGKTTLANIIAQEMGVSIKSTSGPV-------- 94 Query: 516 LKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS 575 + +P D L + + + + L + V + +LD M+ + Sbjct: 95 --LERPGDLA-ALLTNLEAGDVLFVDEIHRLSPIVEEVLYPAMEDF-----QLDIMIGEG 146 Query: 576 QDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIGFT-RIMFTGYTHEELKN 634 + ++ + L N + R G R+ F Y E+L Sbjct: 147 PAARSIKLDLP-----PFTLVGATTRAGM----LTNPLRDRFGIVQRLEF--YNVEDLAT 195 Query: 635 IIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPEDVRKVRLRMSADAIEIASR 694 I+ L ++ + I A G + L +R D + + Sbjct: 196 IVSRSAGILG---LEIEPQGAAEIAKRARGTPRIANRLLRRVRDFAEVRGQGDITRVIAD 252 Query: 695 KVASVSGDARRALKVCKRAAEIAEKHYMAKHGYGYDGKTVIEDENEEQIYDDEDKDLIES 754 K ++ R R + G D E I D + LI+ Sbjct: 253 KALNLLDVDERGFDHLDRRLLLTMIDKFDGGPVGIDNLAAALSEERHTIEDVLEPYLIQQ 312 >3JCO-J nrPDB Length = 405 Score = 40.2 bits (92), Expect = 0.004, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 71/214 (33%), Gaps = 55/214 (25%) Query: 448 YLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPD 507 LP + E + ++ + + G PG GKTL R V D Sbjct: 165 ELPVKHPE-------LFESLGIAQPKGVILYGPPGTGKTLLARAVAHH----------TD 207 Query: 508 FLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDE 567 ++ ++G L K GE + + + P ++ +DE Sbjct: 208 CKFIRVSG----------AELVQKYIGEGSRMVRELFVMAR--EHAPS------IIFMDE 249 Query: 568 LDAMVTKS-----------QDIMYNFFNW----TTYENAKLIVIAVANTMDLPERQLGNK 612 +D++ + Q M N T +N K+I+ N +D+ + L Sbjct: 250 IDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMA--TNRLDILDPALLR- 306 Query: 613 ITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDS 646 RI +I F + I+ + + +N + Sbjct: 307 -PGRID-RKIEFPPPSVAARAEILRIHSRKMNLT 338 >4M4W-J nrPDB Length = 317 Score = 40.2 bits (92), Expect = 0.004, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 12/119 (10%) Query: 425 KVKKQLNSSYVKEEILKSANFQDYL--PARENEFASIYLSAYSAIESDSATTIYVAGTPG 482 K + + S Y+++++L + Q + P+R F + S E+ +Y+ G G Sbjct: 112 KQQSLMKSMYIQQDLLGATFQQVDISDPSRLAMFQHVTDFLKSYNETGKGKGLYLYGKFG 171 Query: 483 VGKTLTVREVVKELLSSSAQR---EIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLT 538 VGKT + + EL +P+F+ N L+ +TL K++ + T Sbjct: 172 VGKTFMLAAIANELAEKEYSSMIVYVPEFVRELKNSLQD-------QTLEEKLNMVKTT 223 >4YPL-A nrPDB Length = 555 Score = 39.8 bits (91), Expect = 0.005, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 64/167 (38%), Gaps = 12/167 (7%) Query: 475 IYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFL-YVEINGLKMVKPTDCYETLWNKVS 533 + + G PGVGKT R + + + + + EI G + L + + Sbjct: 113 LVLVGPPGVGKTSLGRSIARSMNRKFHRISLGGVRDEAEIRGHRRTYIGAMPGKLIHAM- 171 Query: 534 GERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKL 593 +++ + L+ K + +L+ LD ++ ++ + Y+ +K+ Sbjct: 172 -KQVGVINPVILLDQIDKMSSDWRGDPASAMLEVLD--PEQNNTFTDHYLDVP-YDLSKV 227 Query: 594 IVIAVANTMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRL 640 I ANT+ R L +++ I GYT+ E + I L Sbjct: 228 FFITTANTLQTIPRPLLDRM------EVIEIPGYTNMEKQAIARQYL 268 >6MAT-A nrPDB Length = 813 Score = 39.8 bits (91), Expect = 0.005, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 94/285 (32%), Gaps = 54/285 (18%) Query: 475 IYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSG 534 I + G PG GKTL + V E S I + G Sbjct: 538 ILLWGPPGCGKTLVAKAVANE----SKANFI-------------------------SIKG 568 Query: 535 ERLTWAASMESLEFYFKRVPKNKKKT-IVVLLDELDAMVTKSQDIM-------YNFFNWT 586 L ES + + K ++ D++DA+V + D + N Sbjct: 569 PELLNKYVGESERAVRQLFSRAKSSAPCILFFDQMDALVPRRDDSLSDASARVVNTLLTE 628 Query: 587 T---YENAKLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRLKGL 643 + + + VI N D+ + + + R+G + + + E+ I+ + Sbjct: 629 LDGVGDRSGIYVIGATNRPDMIDEAI--RRPGRLGTSIYVGLP-SAEDRVKILKTLYRNT 685 Query: 644 NDSFFYVDTKTGNAILIDAAGNDTTVKQTLPEDVRKVRLRMSADAIEIASRKVASVSGDA 703 + + G + + A + + T D+ KV L + + + G+ Sbjct: 686 VKAPKKREGTNGEDVDMTDAAAEQQHQGTTDADLEKVALDLR------CTGFSGADLGNL 739 Query: 704 RRALKVCKRAAEIAEKHYMAKHGYGYDGKTVIEDENEEQIYDDED 748 +A A E+ Y + +G +V E+E E + ED Sbjct: 740 MQA-----AAQACLERVYTQRQQKRKEGGSVAEEEEIEPVITMED 779 >5WVI-K nrPDB Length = 428 Score = 39.8 bits (91), Expect = 0.006, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 56/172 (32%), Gaps = 42/172 (24%) Query: 452 REN-EFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLY 510 RE E + Y I D + + G PG GKT+ V+ V + + Sbjct: 185 REAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKA----------AF 234 Query: 511 VEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDA 570 + +NG + V G R+ + + P ++ +DE+D+ Sbjct: 235 IRVNGSEFVHKYLG--------EGPRMV----RDVFRLARENAPS------IIFIDEVDS 276 Query: 571 MVTKS-----------QDIMYNFFNWTTY--ENAKLIVIAVANTMDLPERQL 609 + TK Q I+ ++ + VI N D + L Sbjct: 277 IATKRFDAQTGSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPAL 328 >6EPC-H nrPDB Length = 433 Score = 39.4 bits (90), Expect = 0.007, Method: Composition-based stats. Identities = 70/381 (18%), Positives = 118/381 (30%), Gaps = 100/381 (26%) Query: 277 ISADELEEEEDEEEDE-----DEEEKEARHTNSPRKRGRKIKLGKDDI------------ 319 + AD+ + +EDE++D+ DE + T R+IK +DDI Sbjct: 5 LGADQRKTKEDEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTG 64 Query: 320 ----DASVQPPPKKRGRKPKDPSKPRQMLLISSCRANNTPVIRKFTKKNVARAKKKYTPF 375 D + PP K + Q L ++ C T +I N KY Sbjct: 65 IKESDTGLAPPALWDLAADKQTLQSEQPLQVARC----TKII------NADSEDPKYIIN 114 Query: 376 SKRFKSIAAIPDLTSLPEFYGNSSELMASRFENKLKT---TQKHQIVETIFSKVKKQLNS 432 K+F + DL S ++ + E ++ K+QI + K+ + Sbjct: 115 VKQFAKF--VVDL---------SDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTM 163 Query: 433 SYVKEEILKSA-NFQDYLPARENEFASIYLSAYSAIES---------DSATTIYVAGTPG 482 V+E K + D +E + + + + + + + G PG Sbjct: 164 MQVEE---KPDVTYSDVGGCKE-QIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPG 219 Query: 483 VGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLTWAAS 542 GKTL R V + + IP L K GE Sbjct: 220 TGKTLCARAVA----NRTDACFIPV----------------IGSELVQKYVGEGARMVRE 259 Query: 543 MESLEFYFKRVPKNKKKTIVVLLDELDAMV-----------TKSQDIMYNFFNWTTY--E 589 + + KK ++ DE+DA+ + Q M N Sbjct: 260 LFEMAR--------TKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDP 311 Query: 590 NAKLIVIAVANTMDLPERQLG 610 + V+ N D + L Sbjct: 312 RGNIKVLMATNRPDTLDPALM 332 >5VHN-D nrPDB Length = 262 Score = 39.1 bits (89), Expect = 0.009, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 50/160 (31%), Gaps = 41/160 (25%) Query: 463 AYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPT 522 Y I D + + G PG GKT+ + V ++ + +F+ + Sbjct: 46 LYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-------- 97 Query: 523 DCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS------- 575 G R+ + E ++ +DE+DA+ TK Sbjct: 98 ----------EGPRMVRDVFRLAKE----------NAPAIIFIDEIDAIATKRFDAQTGA 137 Query: 576 ----QDIMYNFFNWTTY--ENAKLIVIAVANTMDLPERQL 609 Q I+ N +N + VI N D + L Sbjct: 138 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPAL 177 >5W0T-A nrPDB Length = 304 Score = 39.1 bits (89), Expect = 0.009, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 56/158 (35%), Gaps = 38/158 (24%) Query: 470 DSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLW 529 + + + + G PG GKT+ + + KE S I + ++ Sbjct: 75 QAPSGVLLYGPPGCGKTMLAKALAKE----SGANFI----------------SIRMSSIM 114 Query: 530 NKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYN-------- 581 +K GE +M SL NK + ++ +DE+D+ + + + Sbjct: 115 DKWYGESNKIVDAMFSL--------ANKLQPCIIFIDEIDSFLRERSSTDHEVTATLKAE 166 Query: 582 -FFNWT-TYENAKLIVIAVANTMDLPERQLGNKITSRI 617 W N ++++I N ++ + ++ R Sbjct: 167 FMTLWDGLLNNGRVMIIGATNRINDIDDAFLRRLPKRF 204 >1SXJ-D nrPDB Length = 353 Score = 39.1 bits (89), Expect = 0.010, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 58/157 (36%), Gaps = 17/157 (10%) Query: 427 KKQLNSSYVKEEILKSANFQDYLPARENEF---ASIYLSAYSAIESDSATTIYVAGTPGV 483 K++++ ++ + + + Y P +E ++S + + G PG Sbjct: 10 KRKISKLAAEQSLAQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGT 69 Query: 484 GKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKV-SGERLTWAAS 542 GKT T+ + KEL ++ +E+N + KV + RLT + Sbjct: 70 GKTSTILALTKELYGP----DLMKSRILELNA----SDERGISIVREKVKNFARLTVSKP 121 Query: 543 MESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIM 579 + +++LDE D+M +Q + Sbjct: 122 SKH-----DLENYPCPPYKIIILDEADSMTADAQSAL 153 >5KG8-A nrPDB Length = 739 Score = 39.1 bits (89), Expect = 0.010, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 4/121 (3%) Query: 384 AIPDLTSLPEFYGNSSELMASRFENKLKTTQKHQIVETIFSKVKKQLNSSYVKEEILKSA 443 + D+ SL E +G S +M + F+ + K Q + + +I + V + + E Sbjct: 62 GVDDMASLTELHGGS--IMYNLFQ-RYKRNQIYTYIGSILASVNPYQPIAGLYEPATMEQ 118 Query: 444 NFQDYLPARENEFASIYLSAYSAI-ESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQ 502 + +L +I Y + + I ++G G GKT + + ++K L S Q Sbjct: 119 YSRRHLGELPPHIFAIANECYRCLWKRHDNQCILISGESGAGKTESTKLILKFLSVISQQ 178 Query: 503 R 503 Sbjct: 179 S 179 >6AZ0-A nrPDB Length = 439 Score = 38.3 bits (87), Expect = 0.014, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 18/54 (33%), Gaps = 7/54 (12%) Query: 445 FQDYLPAREN--EFASIYLSA-----YSAIESDSATTIYVAGTPGVGKTLTVRE 491 F D E E I Y ++ + + G PG GKTL R Sbjct: 2 FDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARA 55 >5T0C-AD nrPDB Length = 418 Score = 37.9 bits (86), Expect = 0.021, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 50/160 (31%), Gaps = 41/160 (25%) Query: 463 AYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPT 522 Y I D + + G PG GKT+ + V ++ + +F+ + Sbjct: 190 LYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-------- 241 Query: 523 DCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS------- 575 G R+ + E ++ +DE+DA+ TK Sbjct: 242 ----------EGPRMVRDVFRLAKE----------NAPAIIFIDEIDAIATKRFDAQTGA 281 Query: 576 ----QDIMYNFFNWTTY--ENAKLIVIAVANTMDLPERQL 609 Q I+ N +N + VI N D + L Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPAL 321 >5E7P-A nrPDB Length = 745 Score = 37.9 bits (86), Expect = 0.021, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 70/218 (32%), Gaps = 37/218 (16%) Query: 440 LKSANFQDYLPARENEFASIYLSA-----YSAIESDSATTIYVAGTPGVGKTLTVREVVK 494 + + D + + ++ +S + D + + G PG GKT VR Sbjct: 482 VTLDDVGDMVETKRALTEAVLWPLQHPDTFSRLGIDPPRGVLLYGPPGCGKTFVVRA--- 538 Query: 495 ELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKV--SGERLTWAASMESLEFYFKR 552 L+SS + + E+ + L+ + S L + +++L + Sbjct: 539 --LASSGRLSVHAVKGSELMDKWVGSSEKAVRELFARARDSAPSLVFLDEIDALAP-RRG 595 Query: 553 VPKNKKKT---IVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQL 609 + T + LL ELD + ++V+ N DL + L Sbjct: 596 QNFDSGVTDKVVASLLTELDGI----------------EPLRDVVVLGATNRPDLIDPAL 639 Query: 610 GNKITSRIGFTRIMF-TGYTHEELKNIIDLRLKGLNDS 646 R++F ++I+ K + + Sbjct: 640 LRPGR----LERLVFVEPPDAAARRDILRTAGKSIPLA 673 >5VHP-E nrPDB Length = 262 Score = 37.9 bits (86), Expect = 0.022, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 49/151 (32%), Gaps = 41/151 (27%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNK 531 + G PG GKTL R V +L + N LK+V ++ +K Sbjct: 40 PKGCLLYGPPGTGKTLLARAVASQL---------------DCNFLKVVS-----SSIVDK 79 Query: 532 VSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS-----------QDIMY 580 GE M + + ++ +DE+DA+ + Q + Sbjct: 80 YIGESARLIREMFNYAR--------DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 131 Query: 581 NFFNWTTYENA--KLIVIAVANTMDLPERQL 609 N + ++ +I N D + L Sbjct: 132 ELLNQMDGFDTLHRVKMIMATNRPDTLDPAL 162 >2X8A-A nrPDB Length = 274 Score = 37.5 bits (85), Expect = 0.025, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 13/133 (9%) Query: 452 RENEFASIYLSA-----YSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIP 506 RE +I + A+ + + +AG PG GKTL + V ++ + Sbjct: 19 REELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAV-----ANESGLNFI 73 Query: 507 DFLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVV--- 563 E+ + + + ++ + E +R + ++ V Sbjct: 74 SVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQ 133 Query: 564 LLDELDAMVTKSQ 576 LL E+D + + Q Sbjct: 134 LLTEMDGLEARQQ 146 >6MSD-E nrPDB Length = 403 Score = 37.5 bits (85), Expect = 0.026, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 49/151 (32%), Gaps = 41/151 (27%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNK 531 + G PG GKTL R V +L + N LK+V ++ +K Sbjct: 181 PKGCLLYGPPGTGKTLLARAVASQL---------------DCNFLKVVS-----SSIVDK 220 Query: 532 VSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS-----------QDIMY 580 GE M + + ++ +DE+DA+ + Q + Sbjct: 221 YIGESARLIREMFNYAR--------DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLM 272 Query: 581 NFFNWTTYENA--KLIVIAVANTMDLPERQL 609 N + ++ +I N D + L Sbjct: 273 ELLNQMDGFDTLHRVKMIMATNRPDTLDPAL 303 >6AMN-A nrPDB Length = 349 Score = 37.5 bits (85), Expect = 0.028, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 50/151 (33%), Gaps = 26/151 (17%) Query: 452 RENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYV 511 RE E S I+ + + G PG+GKT + V + ++ ++P L Sbjct: 186 REEEIRSTIRVLARRIK----SNPCLIGEPGIGKTAIIEGVAQRIID----DDVPTILQG 237 Query: 512 EINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPK---NKKKTIVVLLDEL 568 + ++ A E FK V K K IV+ +DE+ Sbjct: 238 ----------AKLFSLDLAALT----AGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEI 283 Query: 569 DAMVTKSQDIMYNFFNWTTYENAKLIVIAVA 599 ++ +D N +L VI Sbjct: 284 HMLMGNGKDDAANILK-PALSRGQLKVIGAT 313 >2CE7-A nrPDB Length = 476 Score = 37.1 bits (84), Expect = 0.032, Method: Composition-based stats. Identities = 53/307 (17%), Positives = 95/307 (30%), Gaps = 59/307 (19%) Query: 454 NEFASIYLSA-----YSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDF 508 E + ++ I + I + G PG GKTL R V E + Sbjct: 26 EELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGE----------ANV 75 Query: 509 LYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDEL 568 + I+G + L+ V R+ F + + +V +DE+ Sbjct: 76 PFFHISG-------SDFVELFVGVGAARV---------RDLFAQAKAH--APCIVFIDEI 117 Query: 569 DAMVTK-----------SQDIMYNFFNWTTYENAK--LIVIAVANTMDLPERQLGNKITS 615 DA+ + + ++K +IV+A N D+ + L Sbjct: 118 DAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFDSKEGIIVMAATNRPDILDPALLR--PG 175 Query: 616 RIGFTRIMFTG--YTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTL 673 R ++ +++ I R K L + + A + + L Sbjct: 176 RFDKKIVVDPPDMLGRKKILEI-HTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAAL 234 Query: 674 PEDVRKVRLRMSADAIEIASRKVASVSGDARRALKVCKRAAEIAEKHYMAKHGYGYDGKT 733 D E R +A G AR++L + AEK +A H G+ + Sbjct: 235 LAAREGRDKITMKDFEEAIDRVIA---GPARKSLLI-----SPAEKRIIAYHEAGHAVVS 286 Query: 734 VIEDENE 740 + E Sbjct: 287 TVVPNGE 293 >3D8B-A nrPDB Length = 357 Score = 37.1 bits (84), Expect = 0.037, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 40/158 (25%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNK 531 I + G PG GKTL K + S S + +L +K Sbjct: 117 PKGILLFGPPGTGKTLIG----KCIASQSGATFF----------------SISASSLTSK 156 Query: 532 VSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQD------------IM 579 GE ++ ++ + V+ +DE+D+++++ D + Sbjct: 157 WVGEGEKMVRALFAVARCQQPA--------VIFIDEIDSLLSQRGDGEHESSRRIKTEFL 208 Query: 580 YNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRI 617 TT +++V+ N + ++ R+ Sbjct: 209 VQLDGATTSSEDRILVVGATNRPQEIDEAARRRLVKRL 246 >2QZ4-A nrPDB Length = 262 Score = 36.7 bits (83), Expect = 0.048, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 59/190 (31%), Gaps = 47/190 (24%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNK 531 + G PG GKTL + V + + ++P + Sbjct: 39 PKGALLLGPPGCGKTLLAKAV-------ATEAQVP----------------------FLA 69 Query: 532 VSGERLTWAASMESLEFYFKRVPKNK-KKTIVVLLDELDAMVTKSQDIMYNFFNWTTYEN 590 ++G + + + +V +DE+DA+ K M F N + Sbjct: 70 MAGAEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSNTEEEQT 129 Query: 591 AK--------------LIVIAVANTMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNII 636 +IV+A N D+ + L R+ + T +E + I Sbjct: 130 LNQLLVEMDGMGTTDHVIVLASTNRADILDGALMR--PGRLDRHVFIDLP-TLQERREIF 186 Query: 637 DLRLKGLNDS 646 + LK L + Sbjct: 187 EQHLKSLKLT 196 >4YPN-A nrPDB Length = 293 Score = 36.4 bits (82), Expect = 0.054, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 58/157 (36%), Gaps = 38/157 (24%) Query: 475 IYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSG 534 + + G PGVGKT R + + + F + + G++ ++ G Sbjct: 146 LVLVGPPGVGKTSLGRSIARSMNRK--------FHRISLGGVRDEA----------EIRG 187 Query: 535 ERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAM-----------------VTKSQD 577 R T+ +M + + V+LLDE+D M ++ Sbjct: 188 HRRTYIGAMPG--KLIHAMKQVGVINPVILLDEIDKMSSDWRGDPASAMLEVLDPEQNNT 245 Query: 578 IMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKIT 614 ++ + Y+ +K+ I ANT+ R L +++ Sbjct: 246 FTDHYLDVP-YDLSKVFFITTANTLQTIPRPLLDRME 281 >1SXJ-A nrPDB Length = 516 Score = 36.4 bits (82), Expect = 0.065, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 54/147 (36%), Gaps = 18/147 (12%) Query: 475 IYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSG 534 + G PG+GKT V +EL + +E N + T + N + Sbjct: 80 AMLYGPPGIGKTTAAHLVAQEL----------GYDILEQNASDVRSKTLLNAGVKNALDN 129 Query: 535 ERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLI 594 + + + K V+++DE+D M + + + + LI Sbjct: 130 MSVVG------YFKHNEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCRKTSTPLI 183 Query: 595 VIAVANTMDLPERQLGNKITSRIGFTR 621 +I N +LP+ + +++ I F R Sbjct: 184 LI--CNERNLPKMRPFDRVCLDIQFRR 208 >4LGM-A nrPDB Length = 295 Score = 36.4 bits (82), Expect = 0.065, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 73/253 (28%), Gaps = 46/253 (18%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKELLSS----------------SAQREIPDFLYVEING 515 I + G PG GKT+ V E+ S + + F Sbjct: 57 PRGILLYGPPGCGKTMIAAAVANEIDSIFMQLDAASVMSKWLGEAEKNVANVFKMAREES 116 Query: 516 LKMVKPTDCYETLWNKVSGE--RLTWAASMESLEFYFKR-----VPKNKKKTIV------ 562 K KP + + + G + +F + +N K ++ Sbjct: 117 KKQNKPAIIFIDQLDALLGVYSTEVGGEARVRNQFLKEMDGLLDKSENYKVYVIGATNKP 176 Query: 563 VLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIGFTRI 622 LDE A + + Q +Y YE + + + L + + + Sbjct: 177 WRLDE--AFLRRFQKRIY--VPLPDYEQRLSLFKYYTSKIKL---------DTEVSLEEL 223 Query: 623 --MFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPEDVRKV 680 + GYT ++++I+ + + G I +K +P ++ Sbjct: 224 AKLTEGYTASDIRDIV--QAAHIKVVKEMFKNNLGEPRTITLQDFKDILKVRMPSVNPEL 281 Query: 681 RLRMSADAIEIAS 693 A + + Sbjct: 282 IKAYEAWTEKFKA 294 >5UBV-A nrPDB Length = 246 Score = 36.4 bits (82), Expect = 0.066, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 53/158 (33%), Gaps = 19/158 (12%) Query: 443 ANFQDYLPAREN--EFASIYLSA-----YSAIESDSATTIYVAGTPGVGKTLTVREVVKE 495 A F D E E + +S + + + G PG GKTL R V Sbjct: 3 ARFSDVHGCDEAKEELQELVEFLRNPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAV--- 59 Query: 496 LLSSSAQREIPDFLY--VEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRV 553 + + +P F E + + + L+N + + E +R Sbjct: 60 ----AGEAGVPFFYMSGSEFDEIYVGVGAKRVRELFNAAKAKAPSIVFIDELDAIGGRRN 115 Query: 554 PKNK---KKTIVVLLDELDAMVTKSQDIMYNFFNWTTY 588 ++ ++T+ LL E+D S I+ N+ Sbjct: 116 SRDATYVRQTLNQLLTEMDGFAQNSGVIILGATNFPES 153 >5VY8-A nrPDB Length = 908 Score = 36.0 bits (81), Expect = 0.068, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 50/151 (33%), Gaps = 26/151 (17%) Query: 452 RENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYV 511 RE E S I+ + + G PG+GKT + V + ++ ++P L Sbjct: 189 REEEIRSTIRVLARRIK----SNPCLIGEPGIGKTAIIEGVAQRIID----DDVPTILQG 240 Query: 512 EINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPK---NKKKTIVVLLDEL 568 + ++ A E FK V K K IV+ +DE+ Sbjct: 241 ----------AKLFSLDLAALT----AGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEI 286 Query: 569 DAMVTKSQDIMYNFFNWTTYENAKLIVIAVA 599 ++ +D N +L VI Sbjct: 287 HMLMGNGKDDAANILK-PALSRGQLKVIGAT 316 >3WHK-A nrPDB Length = 270 Score = 36.0 bits (81), Expect = 0.087, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 46/153 (30%), Gaps = 41/153 (26%) Query: 470 DSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLW 529 D + + G PG GKTL + + E+N + L Sbjct: 49 DPPKGVLLYGPPGCGKTLMAKAIAH-----------------EVNATFI---RVVGSELV 88 Query: 530 NKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQD-----------I 578 K GE E E ++ P ++ +DE+DA+ K D Sbjct: 89 RKYIGEGARL--VHELFELAKEKAP------TIIFIDEIDAIGAKRLDETTGGEREVNRT 140 Query: 579 MYNFFNWTTY--ENAKLIVIAVANTMDLPERQL 609 + + VIA N D+ + L Sbjct: 141 LMQLLAEMDGFDPRGNVKVIAATNRPDILDPAL 173 >4D81-A nrPDB Length = 283 Score = 35.6 bits (80), Expect = 0.090, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 23/101 (22%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNK 531 I + G PG GKT+ V EL S ++ ++ ++ +K Sbjct: 45 PRGILLYGPPGCGKTMIAAAVANELDS----------EFIHVDA----------ASIMSK 84 Query: 532 VSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMV 572 GE ++ + + + K + K ++ +DELDA++ Sbjct: 85 WLGEA---EKNVAKIFKTARELSKKENKPAIIFIDELDALL 122 >5EQT-A nrPDB Length = 257 Score = 35.6 bits (80), Expect = 0.098, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 46/153 (30%), Gaps = 41/153 (26%) Query: 470 DSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLW 529 D + + G PG GKTL + + E+N + L Sbjct: 37 DPPKGVLLYGPPGCGKTLMAKALAH-----------------EVNATFI---RVVGSELV 76 Query: 530 NKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQD-----------I 578 K GE E E ++ P ++ +DE+DA+ K D Sbjct: 77 RKYIGEGARL--VHELFELAKEKAP------TIIFIDEIDAIGAKRMDETTGGEREVNRT 128 Query: 579 MYNFFNWTTY--ENAKLIVIAVANTMDLPERQL 609 + + VIA N D+ + L Sbjct: 129 LMQLLAEMDGFDPRGNVKVIAATNRPDILDPAL 161 >3SYK-A nrPDB Length = 309 Score = 35.6 bits (80), Expect = 0.10, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 76/236 (32%), Gaps = 34/236 (14%) Query: 475 IYVAGTPGVGKTLTVREVVKELLSSSAQRE--IPDFLYVEINGLKMVKPTDCYETLWNKV 532 + G PG GKT ++ L R+ + ++ G + + + + Sbjct: 70 MSFTGNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTKEVLKRA 129 Query: 533 SGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAK 592 G L E+ Y ++ + + +L L M D++ Sbjct: 130 MGGVLFID---EAYYLYRPDNERDYGQEAIEIL--LQVMENNRDDLV------------- 171 Query: 593 LIVIAVANTMDLPERQLG--NKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYV 650 +I+ A+ M E SRI I F Y+ EEL I + D Y Sbjct: 172 VILAGYADRM---ENFFQSNPGFRSRIAH-HIEFPDYSDEELFEI----AGHMLDDQNYQ 223 Query: 651 DTKTGNAILIDAAGNDTTVKQTLPEDVRKVRLRMSADAIEIASRKVASVSG--DAR 704 T L G Q + R +R + + A+R + SG DAR Sbjct: 224 MTPEAETALRAYIGLRRN--QPHFANARSIRNALDRARLRQANRLFTASSGPLDAR 277 >1SXJ-B nrPDB Length = 323 Score = 35.2 bits (79), Expect = 0.12, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 83/232 (35%), Gaps = 40/232 (17%) Query: 475 IYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSG 534 + ++G PG+GKT +V + ELL S + +E+N S Sbjct: 45 MIISGMPGIGKTTSVHCLAHELLGRSYADGV-----LELNA-----------------SD 82 Query: 535 ERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLI 594 +R + F K++ K +V+LDE D+M +Q + + Sbjct: 83 DRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAF 142 Query: 595 VIAVANTM--------------DLPERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRL 640 +N + L + + ++ I + YT++ L+ II Sbjct: 143 ACNQSNKIIEPLQSQCAILRYSKLSDEDVLKRLLQIIKLEDV---KYTNDGLEAIIFTAE 199 Query: 641 KGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPEDVRKVRLRMS-ADAIEI 691 + + + + L++A V P V+K+ L + D+I+I Sbjct: 200 GDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKMLLASNLEDSIQI 251 >1HQC-A nrPDB Length = 324 Score = 35.2 bits (79), Expect = 0.12, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 60/196 (30%), Gaps = 27/196 (13%) Query: 440 LKSANFQDYL-PARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLS 498 L+ +Y+ R + +YL A A + + + G PG+GKT + EL Sbjct: 6 LRPKTLDEYIGQERLKQKLRVYLEAAKA-RKEPLEHLLLFGPPGLGKTTLAHVIAHELGV 64 Query: 499 SSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKK 558 + P + KP D L N + + + + L + Sbjct: 65 NLRVTSGPA----------IEKPGDLAAILANSLEEGDILFIDEIHRLSRQAEEHLYPAM 114 Query: 559 KTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIG 618 + V +D ++ + + +I L L SR G Sbjct: 115 EDFV-----MDIVIGQGPAARTIRLELP-----RFTLIGATTRPGLITAPLL----SRFG 160 Query: 619 FTRIMFTGYTHEELKN 634 + YT EEL Sbjct: 161 IVEHL-EYYTPEELAQ 175 >1OFI-A nrPDB Length = 310 Score = 35.2 bits (79), Expect = 0.12, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 34/113 (30%), Gaps = 21/113 (18%) Query: 464 YSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTD 523 + I + G GVGKT R + K + + E F V G ++ Sbjct: 42 EPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVD---S 98 Query: 524 CYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQ 576 L + G + +V +DE+D + K + Sbjct: 99 IIRDLTDSAGGAIDAVEQNG------------------IVFIDEIDKICKKGE 133 >2R65-A nrPDB Length = 268 Score = 34.4 bits (77), Expect = 0.22, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 55/166 (33%), Gaps = 24/166 (14%) Query: 453 ENEFASIYLSA-----YSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPD 507 + E I Y+ + + + + G PG GKTL + V E Sbjct: 20 KEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSS 79 Query: 508 FLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKN---KKKTIVVL 564 F+ + + GL + D +ET + V +++T+ L Sbjct: 80 FIEMFV-GLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGVVSGNDEREQTLNQL 138 Query: 565 LDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLG 610 L E+D ENA +IV+A N ++ + L Sbjct: 139 LAEMDGF---------------GSENAPVIVLAATNRPEILDPALM 169 >5VHO-A nrPDB Length = 267 Score = 34.4 bits (77), Expect = 0.25, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 42/155 (27%), Gaps = 43/155 (27%) Query: 470 DSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLW 529 + + + G PG GKTL R V + + Sbjct: 50 EPPKGVLLFGPPGTGKTLCARAVANRT-----------------------------DACF 80 Query: 530 NKVSGERLTWAASMESLEFYFKRVPKNK-KKTIVVLLDELDAMV-----------TKSQD 577 +V G L E + + KK ++ DE+DA+ + Q Sbjct: 81 IRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQR 140 Query: 578 IMYNFFNWTTY--ENAKLIVIAVANTMDLPERQLG 610 M N + V+ N D + L Sbjct: 141 TMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 175 >5VFU-A nrPDB Length = 361 Score = 34.4 bits (77), Expect = 0.25, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 42/155 (27%), Gaps = 43/155 (27%) Query: 470 DSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLW 529 + + + G PG GKTL R V + + Sbjct: 135 EPPKGVLLFGPPGTGKTLCARAVANRT-----------------------------DACF 165 Query: 530 NKVSGERLTWAASMESLEFYFKRVPKNK-KKTIVVLLDELDAMV-----------TKSQD 577 +V G L E + + KK ++ DE+DA+ + Q Sbjct: 166 IRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQR 225 Query: 578 IMYNFFNWTTY--ENAKLIVIAVANTMDLPERQLG 610 M N + V+ N D + L Sbjct: 226 TMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 260 >4L16-A nrPDB Length = 334 Score = 34.0 bits (76), Expect = 0.27, Method: Composition-based stats. Identities = 22/158 (13%), Positives = 48/158 (30%), Gaps = 40/158 (25%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNK 531 + + G PG GKT+ + + S +L +K Sbjct: 89 PKGVLLFGPPGTGKTMIG----RCVASQCKATFF----------------NISASSLTSK 128 Query: 532 VSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTK------------SQDIM 579 W E L V + K +++ + DE+D++++ + + Sbjct: 129 -------WVGEGEKLVRALFSVARLKLPSVIFI-DEIDSLLSSRSESEHESSRRIKTEFL 180 Query: 580 YNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRI 617 T + +L+V+ N + + R+ Sbjct: 181 VQLDGVNTAPDERLLVLGATNRPQELDEAARRRFQKRL 218 >1TKI-A nrPDB Length = 321 Score = 34.0 bits (76), Expect = 0.27, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 41/94 (43%), Gaps = 3/94 (3%) Query: 558 KKTIVVLLDELD-AMVTKSQDIMYNFFNWT-TYENAKLIVIAVANTMDLPERQLGNKITS 615 + VLL ++ + +Q I+ N N T++ I++ MD +R L + S Sbjct: 190 GTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISI-EAMDFVDRLLVKERKS 248 Query: 616 RIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFY 649 R+ + + + ++++ + ++ L +Y Sbjct: 249 RMTASEALQHPWLKQKIERVSTKVIRTLKHRRYY 282 >1YE8-A nrPDB Length = 178 Score = 34.0 bits (76), Expect = 0.28, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 53/128 (41%), Gaps = 23/128 (17%) Query: 475 IYVAGTPGVGKTLTVREVVKELLSSS-----------AQREIPDFLYVEINGLKMVKPTD 523 I + G PGVGKT V+++V+ L + ++ F + G K + + Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSK 62 Query: 524 CYETLWNKVSGERLTWAASME-----SLEFYFKRVPKNKKKTIVVLLDE---LDAMVTKS 575 + + K+ G E LE ++ K+++K V+++DE ++ K Sbjct: 63 FFTS--KKLVGSYGVNVQYFEELAIPILERAYREAKKDRRK--VIIIDEIGKMELFSKKF 118 Query: 576 QDIMYNFF 583 +D++ Sbjct: 119 RDLVRQIM 126 >2AW5-A nrPDB Length = 575 Score = 34.0 bits (76), Expect = 0.34, Method: Composition-based stats. Identities = 50/273 (18%), Positives = 85/273 (31%), Gaps = 38/273 (13%) Query: 515 GLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTK 574 L++ K +T+ + +GE A + + + +PK K + L+D +V Sbjct: 295 ALRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKG 354 Query: 575 SQDI-------------MYNFFNWTTYENAKLIVIAVANTMD-LPERQLGNKITSRIGFT 620 + M N +I VA E+ L K + Sbjct: 355 RASLTQEKEKFAHEHEEMKNLEAIVQEIK-PTALIGVAAIGGAFSEQIL--KDMAAFNER 411 Query: 621 RIMF--------TGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQT 672 I+F + E+ I R + S F T L GN++ V Sbjct: 412 PIIFALSNPTSKAECSAEQCYKITKGRAIFASGSPFDPVTLPNGQTLYPGQGNNSYVFPG 471 Query: 673 LPEDVRKVRLRMSADAIEIASRKVAS--------VSGDARRALKVCK-RAAEIAEK---- 719 + V LR D I + + +V + G L + + +IAEK Sbjct: 472 VALGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVKD 531 Query: 720 HYMAKHGYGYDGKTVIEDENEEQIYDDEDKDLI 752 Y K Y E Q+Y + ++ Sbjct: 532 AYQEKTATVYPEPQNKEAFVRSQMYSTDYDQIL 564 >5TSG-B nrPDB Length = 588 Score = 33.7 bits (75), Expect = 0.34, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 20/111 (18%) Query: 418 IVETIFSK--VKKQLNSSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSA-TT 474 ++ T+F + V + L+ S ++ ++ K D L AI Sbjct: 294 VLPTLFGEKVVLRLLDKSNLQLDMTKLGYEPDAL-----------HYFKEAI--HKPFGM 340 Query: 475 IYVAGTPGVGKTLTVREVVKEL----LSSSAQREIPDFLYVEINGLKMVKP 521 + V G G GKT+++ + EL + S + +F + IN ++M + Sbjct: 341 VLVTGPTGSGKTVSLYSALGELNKTTENISTAEDPVEFNFAGINQVQMHED 391 >2GA8-A nrPDB Length = 359 Score = 33.7 bits (75), Expect = 0.37, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 45/119 (37%), Gaps = 20/119 (16%) Query: 458 SIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQ--REIPDFLYVE--- 512 + + IE + + + G+PG GK+ E+ + + E P+ + V Sbjct: 10 DVLQLLDNRIEDNYRVCVILVGSPGSGKSTIAEELCQIINEKYHTFLSEHPNVIEVNDRL 69 Query: 513 ------INGLKMVKPTDCYETLWNK---------VSGERLTWAASMESLEFYFKRVPKN 556 ++ LK ++P E + N+ V+ + + ++A + E V + Sbjct: 70 KPMVNLVDSLKTLQPNKVAEMIENQGLFKDHVEDVNFQPVKYSALTSNNEECTAVVARG 128 >5DO7-A nrPDB Length = 666 Score = 33.7 bits (75), Expect = 0.41, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 54/158 (34%), Gaps = 15/158 (9%) Query: 447 DYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIP 506 D R+ I ++ +S + + G+ G GKT + + L + Sbjct: 56 DITSCRQQWTRQILKDV--SLYVESGQIMCILGSSGSGKTTLLDAMSGRLGRAGTFLG-- 111 Query: 507 DFLYVEINGL--KMVKPTDCYETLWNKVSGERLTWAASMESLEFYF---KRVPKNKKKTI 561 V +NG + + DC+ + + + P + +K + Sbjct: 112 ---EVYVNGRALRREQFQDCFSYVLQSDTLLSSLTVRETLHYTALLAIRRGNPGSFQKKV 168 Query: 562 VVLLDELDAMVTKSQDIM--YNFFNWTTYENAKLIVIA 597 ++ EL + + ++ Y+ +T E ++ + A Sbjct: 169 EAVMAELS-LSHVADRLIGNYSLGGISTGERRRVSIAA 205 >5W3D-A nrPDB Length = 412 Score = 33.3 bits (74), Expect = 0.46, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 1/90 (1%) Query: 407 ENKLKTTQKHQIVETIFSKVKKQLNSSYVKEEILKSANFQDYLPARENEFASIYLSAYSA 466 EN++ T + T+ + S + ++I L ++ + F + SA Sbjct: 75 ENRMCCTWTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSA 134 Query: 467 IESDSATTIYVAGTPGVGKTLTVREVVKEL 496 ++ + I+ G G GKT T+ V + + Sbjct: 135 LDGYNI-CIFAYGQTGSGKTYTMDGVPESV 163 >4L4U-A nrPDB Length = 447 Score = 33.3 bits (74), Expect = 0.48, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 66/194 (34%), Gaps = 32/194 (16%) Query: 455 EFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEIN 514 + I ++ + + G GVGK EVV L+ S+ R F+ + + Sbjct: 153 KMKEILEKIKKISCAECP--VLITGESGVGK-----EVVARLIHKSSDRSKEPFVALNVA 205 Query: 515 GLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTK 574 + P D +E E+ + ++ S E +F+ + LDE+ + + Sbjct: 206 SI----PRDIFEA--ELFGYEKGAFTGAVSSKEGFFELADGG-----TLFLDEIGELSLE 254 Query: 575 SQDIMYNFFNWT--------TYENAKLIVIAVANTMDLPERQLGNKITS----RIGFTRI 622 +Q + + ++A N ++ E K R+G I Sbjct: 255 AQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNR-NIKELVKEGKFREDLYYRLGVIEI 313 Query: 623 MFTGYTHEELKNII 636 E ++II Sbjct: 314 EIPPLR-ERKEDII 326 >5VHF-B nrPDB Length = 340 Score = 33.3 bits (74), Expect = 0.49, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 59/190 (31%), Gaps = 47/190 (24%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNK 531 + + G PG GKTL + V N L K Sbjct: 127 PKGVILYGPPGTGKTLLAKAV--------------------ANQTSATFLRVVGSELIQK 166 Query: 532 VSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS-----------QDIMY 580 G+ + + F+ ++ +V +DE+DA+ TK Q M Sbjct: 167 YLGDG------PKLVRELFRVAEEHAPS--IVFIDEIDAIGTKRYDSNSGGEREIQRTML 218 Query: 581 NFFNWTTYENAK--LIVIAVANTMDLPERQLGNKITSRIGFTRIMFT---GYTHEELKNI 635 N +++ + VI N ++ + L I +I F T + + I Sbjct: 219 ELLNQLDGFDSRGDVKVIMATNRIETLDPAL---IRPGRIDRKIEFPLPDEKTKKRIFQI 275 Query: 636 IDLRLKGLND 645 R+ +D Sbjct: 276 HTSRMTLADD 285 >2GZA-A nrPDB Length = 361 Score = 33.3 bits (74), Expect = 0.52, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 6/88 (6%) Query: 454 NEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKEL---LSSSAQREIPD-FL 509 E A++ + I VAG G GKT ++ +++E+ ++P+ FL Sbjct: 159 KEAGDYMSFLRRAVQLERV--IVVAGETGSGKTTLMKALMQEIPFDQRLITIEDVPELFL 216 Query: 510 YVEINGLKMVKPTDCYETLWNKVSGERL 537 N + + P++ E V+ L Sbjct: 217 PDHPNHVHLFYPSEAKEEENAPVTAATL 244 >6MSK-B nrPDB Length = 440 Score = 32.9 bits (73), Expect = 0.59, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 59/190 (31%), Gaps = 47/190 (24%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNK 531 + + G PG GKTL + V N L K Sbjct: 219 PKGVILYGPPGTGKTLLAKAV--------------------ANQTSATFLRVVGSELIQK 258 Query: 532 VSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS-----------QDIMY 580 G+ + + F+ ++ +V +DE+DA+ TK Q M Sbjct: 259 YLGDG------PKLVRELFRVAEEHAPS--IVFIDEIDAIGTKRYDSNSGGEREIQRTML 310 Query: 581 NFFNWTTYENAK--LIVIAVANTMDLPERQLGNKITSRIGFTRIMFT---GYTHEELKNI 635 N +++ + VI N ++ + L I +I F T + + I Sbjct: 311 ELLNQLDGFDSRGDVKVIMATNRIETLDPAL---IRPGRIDRKIEFPLPDEKTKKRIFQI 367 Query: 636 IDLRLKGLND 645 R+ +D Sbjct: 368 HTSRMTLADD 377 >2CHV-A nrPDB Length = 319 Score = 32.9 bits (73), Expect = 0.61, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 79/248 (31%), Gaps = 47/248 (18%) Query: 475 IYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSG 534 + +G PG GKT T + ++L + + ++E+N S Sbjct: 41 LLFSGPPGTGKTATAIALARDLFGENWRDN-----FIEMNA-----------------SD 78 Query: 535 ERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLI 594 ER + EF P ++ LDE DA+ +Q + + + I Sbjct: 79 ERGIDVVRHKIKEFARTA-PIGGAPFKIIFLDEADALTADAQAALRRTMEMYSKS-CRFI 136 Query: 595 VIAVANTMDLPERQLGNKITSRIGFTRIMFTGYTHEELK------------NIIDLRLKG 642 + + + R + I SR R F E +K I + L+ Sbjct: 137 L-----SCNYVSRIIEP-IQSRCAVFR--FKPVPKEAMKKRLLEICEKEGVKITEDGLEA 188 Query: 643 LNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPEDVRKVRLRMSADAIEIASRKVASVSGD 702 L K NA+ AA + T+ + R + I+ A + + Sbjct: 189 LIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALK---GNFME 245 Query: 703 ARRALKVC 710 AR L Sbjct: 246 ARELLDRL 253 >6FVU-I nrPDB Length = 384 Score = 32.9 bits (73), Expect = 0.63, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 50/160 (31%), Gaps = 41/160 (25%) Query: 463 AYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPT 522 Y + + + G PG GKTL + V + ++ + I P Sbjct: 154 LYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ----TSATFLRIVGSELIQKYLGDGPR 209 Query: 523 DCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS------- 575 C ++ KV+GE +V +DE+DA+ TK Sbjct: 210 LC-RQIF-KVAGENAP----------------------SIVFIDEIDAIGTKRYDSNSGG 245 Query: 576 ----QDIMYNFFNWTTY--ENAKLIVIAVANTMDLPERQL 609 Q M N + + VI N ++ + L Sbjct: 246 EREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPAL 285 >3JCP-I nrPDB Length = 437 Score = 32.9 bits (73), Expect = 0.63, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 50/160 (31%), Gaps = 41/160 (25%) Query: 463 AYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPT 522 Y + + + G PG GKTL + V + ++ + I P Sbjct: 207 LYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ----TSATFLRIVGSELIQKYLGDGPR 262 Query: 523 DCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS------- 575 C ++ KV+GE +V +DE+DA+ TK Sbjct: 263 LC-RQIF-KVAGENAP----------------------SIVFIDEIDAIGTKRYDSNSGG 298 Query: 576 ----QDIMYNFFNWTTY--ENAKLIVIAVANTMDLPERQL 609 Q M N + + VI N ++ + L Sbjct: 299 EREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPAL 338 >1R6B-X nrPDB Length = 758 Score = 32.9 bits (73), Expect = 0.68, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 9/123 (7%) Query: 408 NKLKTTQKHQIVETIFSKVKKQLNSSYVKEEILKSANFQDYLP--------ARENEFASI 459 +K K T +E++ +++ + S + + N D L A E +I Sbjct: 415 SKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAI 474 Query: 460 YLSAYSAIESDSA-TTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKM 518 ++ + AG GVGKT ++ K L + ++ +++ + Sbjct: 475 KMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLI 534 Query: 519 VKP 521 P Sbjct: 535 GAP 537 Score = 32.1 bits (71), Expect = 1.2, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 87/282 (30%), Gaps = 37/282 (13%) Query: 447 DYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIP 506 D L RE E + G GVGKT L Q ++P Sbjct: 186 DPLIGREKELERAIQVLCRR----RKNNPLLVGESGVGKTAIAEG----LAWRIVQGDVP 237 Query: 507 DFLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPK--NKKKTIVVL 564 + + DC T+++ G L E FK + K + ++ Sbjct: 238 EVM------------ADC--TIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILF 283 Query: 565 LDELDAM-----VTKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIGF 619 +DE+ + + Q N + K+ VI + ++ +R F Sbjct: 284 IDEIHTIIGAGAASGGQVDAANLIK-PLLSSGKIRVIGSTTYQEFSNIFEKDRALAR-RF 341 Query: 620 TRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPEDVRK 679 +I T + EE II+ LK ++ V + LP+ Sbjct: 342 QKIDITEPSIEETVQIING-LKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAID 400 Query: 680 VRLRMSADA--IEIASRKVASVSGDARRALKVCKRAAEIAEK 719 V A A + ++ RK D V R A I EK Sbjct: 401 VIDEAGARARLMPVSKRKKTVNVADIE---SVVARIARIPEK 439 >5VFP-B nrPDB Length = 389 Score = 32.9 bits (73), Expect = 0.69, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 59/190 (31%), Gaps = 47/190 (24%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNK 531 + + G PG GKTL + V N L K Sbjct: 168 PKGVILYGPPGTGKTLLAKAV--------------------ANQTSATFLRVVGSELIQK 207 Query: 532 VSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS-----------QDIMY 580 G+ + + F+ ++ +V +DE+DA+ TK Q M Sbjct: 208 YLGDG------PKLVRELFRVAEEHAPS--IVFIDEIDAIGTKRYDSNSGGEREIQRTML 259 Query: 581 NFFNWTTYENAK--LIVIAVANTMDLPERQLGNKITSRIGFTRIMFT---GYTHEELKNI 635 N +++ + VI N ++ + L I +I F T + + I Sbjct: 260 ELLNQLDGFDSRGDVKVIMATNRIETLDPAL---IRPGRIDRKIEFPLPDEKTKKRIFQI 316 Query: 636 IDLRLKGLND 645 R+ +D Sbjct: 317 HTSRMTLADD 326 >6EF3-H nrPDB Length = 467 Score = 32.9 bits (73), Expect = 0.71, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 12/23 (52%) Query: 470 DSATTIYVAGTPGVGKTLTVREV 492 D I + G PG GKTL R V Sbjct: 241 DPPKGILLYGPPGTGKTLCARAV 263 >6EF0-H nrPDB Length = 257 Score = 32.9 bits (73), Expect = 0.71, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 12/23 (52%) Query: 470 DSATTIYVAGTPGVGKTLTVREV 492 D I + G PG GKTL R V Sbjct: 41 DPPKGILLYGPPGTGKTLCARAV 63 >4BS1-B nrPDB Length = 173 Score = 32.9 bits (73), Expect = 0.73, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 60/184 (32%), Gaps = 31/184 (16%) Query: 455 EFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEIN 514 + I ++ + + G GVGK EVV L+ + R F+ + + Sbjct: 9 KMKEILEKIKKISCAECP--VLITGESGVGK-----EVVARLIHKLSDRSKEPFVALNVA 61 Query: 515 GLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTK 574 + P D +E E+ + ++ S E +F+ + LDE+ + + Sbjct: 62 SI----PRDIFEA--ELFGYEKGAFTGAVSSKEGFFELADGG-----TLFLDEIGELSLE 110 Query: 575 SQDIMYNFFNWT--------TYENAKLIVIAVANTMDLPERQLGNKITS----RIGFTRI 622 +Q + + ++A N ++ E K R+G I Sbjct: 111 AQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNR-NIKELVKEGKFREDLYYRLGVIEI 169 Query: 623 MFTG 626 Sbjct: 170 EIPP 173 >5VHO-B nrPDB Length = 267 Score = 32.5 bits (72), Expect = 0.76, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 59/190 (31%), Gaps = 47/190 (24%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNK 531 + + G PG GKTL + V N L K Sbjct: 53 PKGVILYGPPGTGKTLLAKAV--------------------ANQTSATFLRVVGSELIQK 92 Query: 532 VSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS-----------QDIMY 580 G+ + + F+ ++ +V +DE+DA+ TK Q M Sbjct: 93 YLGDG------PKLVRELFRVAEEHAPS--IVFIDEIDAIGTKRYDSNSGGEREIQRTML 144 Query: 581 NFFNWTTYENAK--LIVIAVANTMDLPERQLGNKITSRIGFTRIMFT---GYTHEELKNI 635 N +++ + VI N ++ + L I +I F T + + I Sbjct: 145 ELLNQLDGFDSRGDVKVIMATNRIETLDPAL---IRPGRIDRKIEFPLPDEKTKKRIFQI 201 Query: 636 IDLRLKGLND 645 R+ +D Sbjct: 202 HTSRMTLADD 211 >6GMH-U nrPDB Length = 776 Score = 32.5 bits (72), Expect = 0.86, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 17/121 (14%) Query: 224 PQKKDKATQTAQISDAETRATD-----ITDNEDGNEDESSDYESPSDIDVSEDM----DS 274 PQ D Q Q+S+ E +D +DN+D E ++SD E + E M D Sbjct: 304 PQLSDDERQ--QLSEEEKANSDDERPVASDNDD--EKQNSDDEEQPQLSDEEKMQNSDDE 359 Query: 275 GEISADELEEEEDEEEDEDEEEKEARHTNSPR---KRGRKIKLGKD-DIDASVQPPPKKR 330 ++DE D+EE++D + + AR ++S + RK + D + D+ + P Sbjct: 360 RPQASDEEHRHSDDEEEQDHKSESARGSDSEDEVLRMKRKNAIASDSEADSDTEVPKDNS 419 Query: 331 G 331 G Sbjct: 420 G 420 Score = 29.8 bits (65), Expect = 5.9, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 10/87 (11%) Query: 237 SDAETRATDITDNEDGNE---DESSDYESPSDIDVSEDMDSGEIS--ADELEEEEDEEED 291 SD + A++ +D+ED + D+ S E+P+D D D G S E E E+ Sbjct: 194 SDNRSEASERSDHEDNDPSDVDQHSGSEAPND-----DEDEGHRSDGGSHHSEAEGSEKA 248 Query: 292 EDEEEKEARHTNSPRKRGRKIKLGKDD 318 ++EK R S + KI+ D+ Sbjct: 249 HSDDEKWGREDKSDQSDDEKIQNSDDE 275 >5ZWM-J nrPDB Length = 469 Score = 32.5 bits (72), Expect = 0.87, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 22/136 (16%) Query: 172 TVRYICEPTGEKFVDINIEDVKAYIKKVEPREAQEYLKDLTLPSKKKEIKRG----PQKK 227 ++RY+ P EK + + +KAY+ + E + + + + +++ +IK G P+ K Sbjct: 213 SIRYVAHPLPEKINEAKVS-IKAYLTQHERKRLRRNRRKMAREAREIKIKLGLLPKPEPK 271 Query: 228 DKATQTAQISDAETRATDITDNEDGNEDESSDYESPSDIDVSEDMDSGEISADELEEEED 287 K + + + + TD T E +D+ +D+ + LEE E Sbjct: 272 VKLSNMMSVFENDQNITDPTAWEKVVKDQ---------VDLRK--------RKHLEENER 314 Query: 288 EEEDEDEEEKEARHTN 303 ED + KEA + N Sbjct: 315 RHEDAIKRRKEAVNMN 330 >5ZFR-A nrPDB Length = 582 Score = 32.5 bits (72), Expect = 0.87, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 5/57 (8%) Query: 470 DSA-TTIYVAGTPGVGKTLTVREVVKEL----LSSSAQREIPDFLYVEINGLKMVKP 521 + V G G GKT+++ + EL + S + +F + IN ++M + Sbjct: 329 HKPFGMVLVTGPTGSGKTVSLYSALSELNKTTENISTAEDPVEFNFAGINQVQMHED 385 >2W58-A nrPDB Length = 202 Score = 32.5 bits (72), Expect = 0.87, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 72/217 (33%), Gaps = 37/217 (17%) Query: 425 KVKKQLNSSYVKEEILKSANFQDYL--PARENEFASIYLSAYSAIESDSATTIYVAGTPG 482 + + + S ++ EIL+++ L R +Y+ G+ G Sbjct: 5 RQESLIQSMFMPREILRASLSDVDLNDDGRIKAIRFAERFVAEYEPGKKMKGLYLHGSFG 64 Query: 483 VGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLTWAAS 542 VGKT + + EL + I + ++ E L Sbjct: 65 VGKTYLLAAIANELAKRNVSSLIVYVPELFRELKHSLQDQTMNEKLD------------- 111 Query: 543 MESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS---QDIM-----YNFF-NWTTYENAKL 593 Y K+VP V++LD+L A S D+ Y F N T+ + Sbjct: 112 ------YIKKVP-------VLMLDDLGAEAMSSWVRDDVFGPILQYRMFENLPTFFTSNF 158 Query: 594 IVIAVANTMDLPERQLGNKITSRIGFTRIMFTGYTHE 630 + +A+ + +R K+ + RI + Y E Sbjct: 159 DMQQLAHHLTYSQRGEEEKVKAARIMERIRYLAYPIE 195 >4LZZ-A nrPDB Length = 268 Score = 32.1 bits (71), Expect = 0.98, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 65/194 (33%), Gaps = 32/194 (16%) Query: 455 EFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEIN 514 + I ++ + + G GVGK EVV L+ + R F+ + + Sbjct: 26 KMKEILEKIKKISCAECP--VLITGESGVGK-----EVVARLIHKLSDRSKEPFVALNVA 78 Query: 515 GLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTK 574 + P D +E E+ + ++ S E +F+ + LDE+ + + Sbjct: 79 SI----PRDIFEA--ELFGYEKGAFTGAVSSKEGFFELADGG-----TLFLDEIGELSLE 127 Query: 575 SQDIMYNFFNWT--------TYENAKLIVIAVANTMDLPERQLGNKITS----RIGFTRI 622 +Q + + ++A N ++ E K R+G I Sbjct: 128 AQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNR-NIKELVKEGKFREDLYYRLGVIEI 186 Query: 623 MFTGYTHEELKNII 636 E ++II Sbjct: 187 EIPPLR-ERKEDII 199 >6ED3-A nrPDB Length = 848 Score = 32.1 bits (71), Expect = 0.99, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 51/173 (29%), Gaps = 24/173 (13%) Query: 471 SATTIYVA-GTPGVGKTLTVREVVKEL---LSSSAQREIPDFLYVEINGLKMVKPTDCYE 526 T ++ G GVGKT + + L + + ++ ++ + P Sbjct: 598 RPTGAFMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAP----- 652 Query: 527 TLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWT 586 + L +R P VVL DE++ D++ + Sbjct: 653 --------PGYVGYEAGGQLTEAVRRRP-----YTVVLFDEIEKAHPDVFDVLLQVLDEG 699 Query: 587 TYENAKLIVIAVANTMDLPERQL--GNKITSRIGFTRIMFTGYTHEELKNIID 637 + + NT+ + L G + R F L +++ Sbjct: 700 RLTDGHGRTVDFRNTILILTSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLI 752 Score = 32.1 bits (71), Expect = 1.0, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 4/63 (6%) Query: 452 RENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYV 511 R+NE + + + G PGVGKT V + + +++ + D V Sbjct: 183 RDNEIRRVVQVLSRR----TKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIV 238 Query: 512 EIN 514 ++ Sbjct: 239 ALD 241 >1NY5-A nrPDB Length = 387 Score = 32.1 bits (71), Expect = 0.99, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 65/194 (33%), Gaps = 32/194 (16%) Query: 455 EFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEIN 514 + I ++ + + G GVGK EVV L+ + R F+ + + Sbjct: 145 KMKEILEKIKKISCAECP--VLITGESGVGK-----EVVARLIHKLSDRSKEPFVALNVA 197 Query: 515 GLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTK 574 + P D +E E+ + ++ S E +F+ + LDE+ + + Sbjct: 198 SI----PRDIFEA--ELFGYEKGAFTGAVSSKEGFFELADGG-----TLFLDEIGELSLE 246 Query: 575 SQDIMYNFFNWT--------TYENAKLIVIAVANTMDLPERQLGNKITS----RIGFTRI 622 +Q + + ++A N ++ E K R+G I Sbjct: 247 AQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNR-NIKELVKEGKFREDLYYRLGVIEI 305 Query: 623 MFTGYTHEELKNII 636 E ++II Sbjct: 306 EIPPLR-ERKEDII 318 >6EF1-I nrPDB Length = 271 Score = 32.1 bits (71), Expect = 1.0, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 50/160 (31%), Gaps = 41/160 (25%) Query: 463 AYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPT 522 Y + + + G PG GKTL + V + ++ + I P Sbjct: 41 LYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ----TSATFLRIVGSELIQKYLGDGPR 96 Query: 523 DCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKS------- 575 C ++ KV+GE +V +DE+DA+ TK Sbjct: 97 LC-RQIF-KVAGENAP----------------------SIVFIDEIDAIGTKRYDSNSGG 132 Query: 576 ----QDIMYNFFNWTTY--ENAKLIVIAVANTMDLPERQL 609 Q M N + + VI N ++ + L Sbjct: 133 EREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPAL 172 >2CHG-A nrPDB Length = 226 Score = 32.1 bits (71), Expect = 1.0, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 72/215 (33%), Gaps = 36/215 (16%) Query: 475 IYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSG 534 + +G PG GKT T + ++L + + ++E+N S Sbjct: 41 LLFSGPPGTGKTATAIALARDLFGENWRDN-----FIEMNA-----------------SD 78 Query: 535 ERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLI 594 ER + EF P ++ LDE DA+ +Q + + + I Sbjct: 79 ERGIDVVRHKIKEFARTA-PIGGAPFKIIFLDEADALTADAQAALRRTMEMYSKS-CRFI 136 Query: 595 VIAVANTMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKT 654 + + + R + I SR R F E +K RL + + T+ Sbjct: 137 L-----SCNYVSRIIEP-IQSRCAVFR--FKPVPKEAMK----KRLLEICEKEGVKITED 184 Query: 655 GNAILIDAAGNDTTVKQTLPEDVRKVRLRMSADAI 689 G LI +G D + + + AD I Sbjct: 185 GLEALIYISGGDFRKAINALQGAAAIGEVVDADTI 219 >3PFI-A nrPDB Length = 338 Score = 32.1 bits (71), Expect = 1.2, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 70/209 (33%), Gaps = 30/209 (14%) Query: 440 LKSANFQDYLPARENEFASIYLSAYSAI-ESDSATTIYVAGTPGVGKTLTVREVVKELLS 498 L+ +NF Y+ +E+ ++ + +A ++ I +G G+GKT + E+ + Sbjct: 23 LRPSNFDGYI-GQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTTLANIISYEMSA 81 Query: 499 SSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKK 558 + P M++ + + +S + + + L + V Sbjct: 82 NIKTTAAP-----------MIEKSGDLAAILTNLSEGDILFIDEIHRLSPAIEEVLYPAM 130 Query: 559 KTIVVLLDELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIG 618 + LD ++ + K +I + L N + R G Sbjct: 131 EDY-----RLDIIIGSGPAAQTIKIDLP-----KFTLIGATTRAGM----LSNPLRDRFG 176 Query: 619 FT-RIMFTGYTHEELKNIIDLRLKGLNDS 646 R+ F Y EL I+ LN + Sbjct: 177 MQFRLEF--YKDSELALILQKAALKLNKT 203 >6QI8-A nrPDB Length = 456 Score = 32.1 bits (71), Expect = 1.3, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 14/28 (50%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKELLSS 499 + +AG PG GKT + +EL S Sbjct: 63 GRAVLLAGPPGTGKTALALAIAQELGSK 90 >2XSZ-A nrPDB Length = 367 Score = 32.1 bits (71), Expect = 1.3, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 14/28 (50%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKELLSS 499 + +AG PG GKT + +EL S Sbjct: 77 GRAVLLAGPPGTGKTALALAIAQELGSK 104 >6EF0-L nrPDB Length = 273 Score = 32.1 bits (71), Expect = 1.3, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 11/21 (52%) Query: 472 ATTIYVAGTPGVGKTLTVREV 492 + + G PG GKTL + V Sbjct: 52 PKGVLLYGPPGTGKTLLAKAV 72 >5GWJ-A nrPDB Length = 803 Score = 32.1 bits (71), Expect = 1.3, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 5/122 (4%) Query: 215 SKKKEIKRGPQKKDKATQTAQISDAETRATDITDNEDGNEDESSDYESPSDIDVSEDMDS 274 SKK I+ Q+ ++ +A+ +A + + ++ ++D SSD +PS D + ++ Sbjct: 667 SKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILN- 725 Query: 275 GEISADELEEEEDEEEDEDEEEKEARHTNSPRKRGRKIKLGKDDIDASVQPPPKKRGRKP 334 +S L +E+ EE + + K R N KR L K+D+ A V+ K ++ Sbjct: 726 --MSLWSLTKEKVEELIKQRDAK-GREVND-LKRKSPSDLWKEDLAAFVEELDKVESQER 781 Query: 335 KD 336 +D Sbjct: 782 ED 783 >6EMW-E nrPDB Length = 181 Score = 31.7 bits (70), Expect = 1.3, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 31/85 (36%), Gaps = 4/85 (4%) Query: 430 LNSSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTV 489 L+S ++ D + R+ E + + + G PGVGKT Sbjct: 2 LDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRR----TKNNPVLIGEPGVGKTAIA 57 Query: 490 REVVKELLSSSAQREIPDFLYVEIN 514 + + ++++ + D + ++ Sbjct: 58 EGLAQAIVNNEVPETLKDKRVMSLD 82 >5ZFQ-A nrPDB Length = 390 Score = 31.7 bits (70), Expect = 1.3, Method: Composition-based stats. Identities = 29/231 (12%), Positives = 80/231 (34%), Gaps = 33/231 (14%) Query: 448 YLPARENEFASIYLSAYSAIESDSA-TTIYVAGTPGVGKTLTVREVVKELLSSSAQREIP 506 +P + F + L ++ I V G G GK+ T+ ++ ++ + Sbjct: 124 VIPYKILTFEELGLPVVVKELAEKPRGLILVTGPTGSGKSTTLAAIIDKINTERH----- 178 Query: 507 DFLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLD 566 D + + ++ + P +V + + +L++ ++ P VVL+ Sbjct: 179 DHIVTIEDPIEYLHPHKSCVVNQREVGADT---KSFKNALKYILRQDPD------VVLVG 229 Query: 567 ELDAMVTKSQDIMYNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTG 626 EL + + + + L + + + R + +F Sbjct: 230 EL-----RDLETIEAALTLAETGHLCLATLHTNSAVQTINRIVD------------VFPP 272 Query: 627 YTHEELKNIIDLRLKG-LNDSFFYVDTKTGNAILIDAAGNDTTVKQTLPED 676 Y +++ + L+G ++ + + G + ++ + ++ + ED Sbjct: 273 YQQPQVRAQLSFVLEGVMSQTLLPNVSGKGRVLALEVMVPNPAIRNLIRED 323 >4LCB-A nrPDB Length = 367 Score = 31.7 bits (70), Expect = 1.5, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 66/202 (32%), Gaps = 43/202 (21%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNK 531 I + G PG GKT+ V E+ S ++ ++ ++ +K Sbjct: 130 PRGILLYGPPGNGKTMLAAAVANEIDS----------YFIHVDA----------ASIMSK 169 Query: 532 VSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMV------------TKSQDIM 579 GE + + K+ K I+ + DE+DA++ ++Q + Sbjct: 170 WLGE--AEKNVAKIFNTAREYSKKDNKPAIIFV-DEIDALLGTYTSEVGGEVRVRNQFLK 226 Query: 580 YNFFNWTTYENAKLIVIAVANTMDLPERQLGNKITSR-------IGFTRIMFTGYTHE-E 631 EN + VI N + + R +F YT + + Sbjct: 227 EMDGIMDKNENYMVYVIGATNKPWRLDEPFLRRFQKRIYVPLPDFNQRLALFKYYTSKVK 286 Query: 632 LKNIIDLRLKGLNDSFFYVDTK 653 L N+ L + + + D + Sbjct: 287 LGNVDLQELAKMTEGYSASDIR 308 >1LV7-A nrPDB Length = 257 Score = 31.7 bits (70), Expect = 1.5, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 19/55 (34%), Gaps = 7/55 (12%) Query: 445 FQDYLPAREN--EFASIYLSA-----YSAIESDSATTIYVAGTPGVGKTLTVREV 492 F D E E A + + + + + G PG GKTL + + Sbjct: 11 FADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAI 65 >6FVU-L nrPDB Length = 388 Score = 31.7 bits (70), Expect = 1.7, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 11/21 (52%) Query: 472 ATTIYVAGTPGVGKTLTVREV 492 + + G PG GKTL + V Sbjct: 167 PKGVLLYGPPGTGKTLLAKAV 187 >5O6D-A nrPDB Length = 545 Score = 31.4 bits (69), Expect = 1.7, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 41/104 (39%), Gaps = 8/104 (7%) Query: 470 DSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLW 529 ++ I+ G+ G GK++ +RE++K L + + + + T Sbjct: 14 ENGHNIFYTGSAGTGKSILLREMIKVLKGIYGRENVAVTASTGLAACNIGGITI------ 67 Query: 530 NKVSGERLTWAASMESLEFYFKRVPKNKKKTIV--VLLDELDAM 571 + +G L + + + + ++ + +++DE+ + Sbjct: 68 HSFAGIGLGKGDADKLYKKVRRSRKHLRRWENIGALVVDEISML 111 >2Z4R-A nrPDB Length = 440 Score = 31.4 bits (69), Expect = 1.7, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 102/279 (36%), Gaps = 53/279 (18%) Query: 440 LKSAN-FQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLS 498 L F++++ N FA + + A +++ G G+GKT +++ + + Sbjct: 98 LNPDYTFENFVVGPGNSFA-YHAALEVAKHPGRYNPLFIYGGVGLGKT----HLLQSIGN 152 Query: 499 SSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERLTWAASMESLEFYFKRVPKNKK 558 Q E PD + I K + + + E E Y K+V Sbjct: 153 YVVQNE-PDLRVMYITSEKFLNDLV-----------DSMKEGKLNEFREKYRKKVD---- 196 Query: 559 KTIVVLLDELDAMVTKS--QDIMYNFFNWTTYENAKLIVIAVANTMDLPERQ--LGNKIT 614 ++L+D++ ++ K+ Q +++ FN +++ K IVI + P++ +++ Sbjct: 197 ---ILLIDDVQFLIGKTGVQTELFHTFN-ELHDSGKQIVI---CSDREPQKLSEFQDRLV 249 Query: 615 SRIGFTRIM-FTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQTL 673 SR + E K+I L+ I+ V + Sbjct: 250 SRFQMGLVAKLEPPDEETRKSIARKMLE------------------IEHGELPEEVLNFV 291 Query: 674 PEDVRKVRLRMSADAIE-IASRKVASVSGDARRALKVCK 711 E+V R+ I+ + ++ D + A+ + K Sbjct: 292 AENVDDNLRRLRGAIIKLLVYKETTGKEVDLKEAILLLK 330 >2B5U-A nrPDB Length = 551 Score = 31.4 bits (69), Expect = 1.8, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 23/110 (20%) Query: 239 AETRATDITDNEDGNEDESSDYESPSDIDVSEDMDSGEISADELEEEEDEEEDEDEEEKE 298 A+ TD+ +N+ D ++ +S +D +S M+S + D+ E+ DE Sbjct: 397 AQRAQTDV-NNKQAAFDAAAKEKSDADAALSSAMESRKKKEDKKRSAENNLNDE------ 449 Query: 299 ARHTNSPRKRGRKIKLGKDDIDASVQPPPKKRG------RKPKDPSKPRQ 342 N PRK G D P PK KP P P+Q Sbjct: 450 ---KNKPRK-------GFKDYGHDYHPAPKTENIKGLGDLKPGIPKTPKQ 489 >5WVI-L nrPDB Length = 437 Score = 31.4 bits (69), Expect = 1.8, Method: Composition-based stats. Identities = 8/21 (38%), Positives = 11/21 (52%) Query: 472 ATTIYVAGTPGVGKTLTVREV 492 + + G PG GKTL + V Sbjct: 215 PKGVLLYGPPGTGKTLLAKAV 235 >6EM8-A nrPDB Length = 818 Score = 31.4 bits (69), Expect = 1.9, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 31/85 (36%), Gaps = 4/85 (4%) Query: 430 LNSSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTV 489 L+S ++ D + R+ E + + + G PGVGKT Sbjct: 163 LDSLARDLTVIAKDGTLDPVIGRDKEITRVIEVLSRR----TKNNPVLIGEPGVGKTAIA 218 Query: 490 REVVKELLSSSAQREIPDFLYVEIN 514 + + ++++ + D + ++ Sbjct: 219 EGLAQAIVNNEVPETLKDKRVMSLD 243 >5D4W-A nrPDB Length = 926 Score = 31.4 bits (69), Expect = 1.9, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 4/63 (6%) Query: 452 RENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYV 511 RE E + + + G PGVGKT V + + ++++ + + Sbjct: 200 REEEIRRVIRILSRR----TKNNPVLIGEPGVGKTTIVEGLAQRIVNADVPDNLAACKLL 255 Query: 512 EIN 514 ++ Sbjct: 256 SLD 258 >3MKD-A nrPDB Length = 692 Score = 31.4 bits (69), Expect = 2.0, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%) Query: 452 RENEFA----SIYLSAYSAIESDSAT-TIYVAGTPGVGKTLTVREVVKELLSSSAQRE 504 R NE A +I AY ++ D ++ + G G GKT ++V++ L S + + + Sbjct: 146 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQ 203 >2JJ9-A nrPDB Length = 788 Score = 31.4 bits (69), Expect = 2.0, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%) Query: 452 RENEFA----SIYLSAYSAIESDSAT-TIYVAGTPGVGKTLTVREVVKELLSSSAQRE 504 R NE A +I AY ++ D ++ + G G GKT ++V++ L S + + + Sbjct: 158 RRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQ 215 >1JBK-A nrPDB Length = 195 Score = 31.0 bits (68), Expect = 2.3, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 20/54 (37%), Gaps = 4/54 (7%) Query: 452 RENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREI 505 R+ E + + + G PGVGKT V + + +++ + Sbjct: 27 RDEEIRRTIQVL----QRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 76 >6DBW-B nrPDB Length = 533 Score = 31.0 bits (68), Expect = 2.4, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%) Query: 252 GNEDESSDYESPSDIDVSEDMDSGEISADELEEEEDEEED---EDEEEKEAR 300 G ES+D+E + ++ SE++ G ELE D E D E++EE E++ Sbjct: 365 GGSQESTDFEDSAPLEDSEELYFGR-EPHELEYSSDVEGDTYNEEDEEDESQ 415 >3WEE-A nrPDB Length = 476 Score = 31.0 bits (68), Expect = 2.5, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 3/74 (4%) Query: 243 ATDITDNEDGNEDESSDYESPSDIDVSEDMDSGEISADELEEEEDEEEDEDEEEKEARHT 302 A ++ + GNE+E D ++V+E + SG + + LEE E ++ ++ + + Sbjct: 235 AKKLSSFDFGNENEDED---EGTLNVAEIITSGRDTREVLEERERGQKVKNVKNSDLEFN 291 Query: 303 NSPRKRGRKIKLGK 316 ++G +IK+GK Sbjct: 292 TFWDEKGNEIKVGK 305 >1Y63-A nrPDB Length = 184 Score = 31.0 bits (68), Expect = 2.7, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 15/32 (46%) Query: 465 SAIESDSATTIYVAGTPGVGKTLTVREVVKEL 496 ++E I + GTPG GKT + EL Sbjct: 3 GSMEQPKGINILITGTPGTGKTSMAEMIAAEL 34 >5V8F-E nrPDB Length = 479 Score = 30.6 bits (67), Expect = 2.9, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 64/210 (30%), Gaps = 46/210 (21%) Query: 454 NEFA-SIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVE 512 E+ + S SA + + + + G G GKT T+++ P+ V Sbjct: 11 REYQTNCLASYISADPDITPSNLILQGYSGTGKTYTLKKYF---------NANPNLHAVW 61 Query: 513 INGLKMVKPTDCYETLWNKVSGERLT------------------WAASMESLEFYFKRVP 554 + +++V + + V + T + + + Sbjct: 62 LEPVELVSWKPLLQAIARTVQYKLKTLYPNIPTTDYDPLQVEEPFLLVKTLHNIFVQYES 121 Query: 555 KNKKKTIVVLLDELDAMVTKSQDIMYNFFN--------WTTYENAKLIVIAVANTMDLPE 606 +K + ++LD D++ QD+ FN + I + Sbjct: 122 LQEKTCLFLILDGFDSL----QDLDAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQ 177 Query: 607 RQLGNKITSRIGFTRIMFTGYTHEELKNII 636 R S +MF Y +E+ I+ Sbjct: 178 RY------STHCIPTVMFPRYNVDEVSTIL 201 >5WDH-A nrPDB Length = 376 Score = 30.6 bits (67), Expect = 3.2, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%) Query: 456 FASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVRE 491 F I + SA++ I+ G G GKT T+ Sbjct: 101 FEEIAMLVQSALDGY-PVCIFAYGQTGSGKTFTMEG 135 >5OFO-C nrPDB Length = 871 Score = 30.6 bits (67), Expect = 3.2, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 20/54 (37%), Gaps = 4/54 (7%) Query: 452 RENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREI 505 R+ E + + + G PGVGKT V + + +++ + Sbjct: 187 RDEEIRRTIQVL----QRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 236 >4CIU-A nrPDB Length = 727 Score = 30.6 bits (67), Expect = 3.2, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 20/54 (37%), Gaps = 4/54 (7%) Query: 452 RENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREI 505 R+ E + + + G PGVGKT V + + +++ + Sbjct: 41 RDEEIRRTIQVL----QRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGL 90 >4XGU-A nrPDB Length = 424 Score = 30.6 bits (67), Expect = 3.3, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 41/102 (40%), Gaps = 24/102 (23%) Query: 475 IYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKM-----VKPTDCYETLW 529 I + G PG GKT + + + L + + +EIN + + + ++ Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVM-LEINSHSLFSKWFSESGKLVQKMF 233 Query: 530 NKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAM 571 +++ + +++K + VL+DE++++ Sbjct: 234 DQID------------------ELAEDEKCMVFVLIDEVESL 257 >5WWN-A nrPDB Length = 709 Score = 30.6 bits (67), Expect = 3.4, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 29/170 (17%) Query: 225 QKKDKATQTAQISDAETRATDITDNEDGNEDESSDYESPSDIDVSEDMDSGEISADELEE 284 Q KA SD + + + D D NE+E ++ + D + E D + D E Sbjct: 306 QTSKKAAVPKGTSDYQAKWY-LDDVIDANEEEEAEQTNGKDETMMEIDDEMMVEQDNEEV 364 Query: 285 EEDEEED-EDEE----------EKEARHTNSPRKRGRKI--KLGKDDIDASVQPPPKKRG 331 DEE D ED E E++ R K R+ ++ + +++++ + RG Sbjct: 365 AGDEEYDIEDNEGFEELSPEEEERQLREFRDMEKEDREFPDEIELEPSESAIERLKRYRG 424 Query: 332 RK----------PKDPSKP---RQMLLISSCRANNTPVIRKFTKKNVARA 368 K KDPS P +++L I + + +I++ KN A+A Sbjct: 425 LKNLYNCDWQVDEKDPSSPAEWKRLLRIGNYKNTKNRIIKE--TKNEAQA 472 >1IM2-A nrPDB Length = 444 Score = 30.6 bits (67), Expect = 3.5, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 12/31 (38%) Query: 464 YSAIESDSATTIYVAGTPGVGKTLTVREVVK 494 + I + G GVGKT R + K Sbjct: 42 EPLRHEVTPKNILMIGPTGVGKTEIARRLAK 72 >6D00-1 nrPDB Length = 883 Score = 30.6 bits (67), Expect = 3.6, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 83/239 (34%), Gaps = 34/239 (14%) Query: 332 RKPKDPSKPRQMLLISSCRANNTPVIRKFTKKNVARAKKKYTPFSKRFKSIAAIPDLTSL 391 R+P P +M ++P + K KK+ + + I A+ DL S+ Sbjct: 71 RQPSQDPPPTEM--------GHSPELAKLLHYAHEHMKKQRDLYIAQDHLILALADLPSM 122 Query: 392 PEFYGNSSELMASRFENKLKTTQKHQIVETIFSK-VKKQLNSSYVKEEILKSANFQDYLP 450 + + EN + + ++ VE+ ++ + L+ + L ++ D + Sbjct: 123 AQVLKEGG-VTKKSLENAVTHVRGNRRVESKSAEEAYEALSKYCIDLTELAASGKLDPVI 181 Query: 451 ARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLY 510 R+ + + + + G PGVGKT + + Sbjct: 182 GRDEIISRVIRVLSRR----TKNNPCLVGEPGVGKTAIAEGLANRI-------------- 223 Query: 511 VEINGLKMVKPTDCYETLWNKVSGERLTWAAS-MESLEFYFKRVPKNKKKTIVVLLDEL 568 +K P+ + +++ G L A E E + + K+ +V +DE+ Sbjct: 224 -----VKGDIPSSLQKKVYSLDIGSLLAGAKYRGEFEERLKAVLKELKEAQAIVFIDEI 277 >4I5O-A nrPDB Length = 363 Score = 30.2 bits (66), Expect = 3.8, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 22/105 (20%) Query: 473 TTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEINGLKMVKPTDCYETLWNKV 532 + I + G G GKTL + + L D + + + + E + N + Sbjct: 52 SNILLIGPTGSGKTLLAETLARLL----------DVPFTMADATTLTEAGYVGEDVENII 101 Query: 533 SGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQD 577 + L+ V K ++ +V +DE+D + KS + Sbjct: 102 Q----------KLLQKCDYDVQKAQRG--IVYIDEIDKISRKSDN 134 >3K9D-A nrPDB Length = 464 Score = 30.2 bits (66), Expect = 3.8, Method: Composition-based stats. Identities = 36/248 (14%), Positives = 78/248 (31%), Gaps = 19/248 (7%) Query: 615 SRIGFTRIMFTGYTHEELKNIIDLR--LKGLNDSFFYVDTKTGNAILIDAAGNDTTVKQT 672 +++ F + + +KN+ + + D K N + V Sbjct: 55 AKMAHEETGFGIWQDKVIKNVFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAG 114 Query: 673 LPEDVRKVRLRMSADAIEIAS--RKVASVSGDARRA-LKVCKRAAEIAEKHYMAKHGYGY 729 L + I I + V S +A +A L+ + +E AEK K Sbjct: 115 LIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISC 174 Query: 730 DGKTVIEDENEEQIYDDEDKDLIESNKAKDDNDDDDDNDGV------------QTVHITH 777 I+ ++ + D L A + ++ +I Sbjct: 175 MTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAYSSGTPAIGVGPGNGPAFIERSANIPR 234 Query: 778 VMKAL--NETLNSHVITFMTRLSFTAKLFIYALLNLMKKNGSQEQELGDIVDEIKLLIEV 835 +K + ++T ++ I + ++ A++ +K G+ + V K ++ Sbjct: 235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRP 294 Query: 836 NGSNKFVM 843 NGS + Sbjct: 295 NGSMNPAI 302 >6FAI-l nrPDB Length = 425 Score = 30.2 bits (66), Expect = 3.8, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 15/88 (17%) Query: 215 SKKKEIKRGPQKKDKATQTAQISDAETRATDITDNEDGNEDESSD---YESPSDIDVSED 271 SKK RG + ++ + A + + + D + E+G D S + Y+S D + SED Sbjct: 331 SKKHPGDRGLETAVESMRNAVYNSDDDMSNDEAEEENGEGDYSEEDEYYDSELDNESSED 390 Query: 272 MDSGEISADELEEEEDEEEDEDEEEKEA 299 + ED +E+E+E EA Sbjct: 391 ------------DSEDAQEEENERIIEA 406 Score = 30.2 bits (66), Expect = 4.7, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 14/96 (14%) Query: 214 PSKKKEIKR-----------GPQKKDKATQTAQISDAETRATDITDNEDGNEDESSDYES 262 P K+++KR G KK + + + R ++D + DE+ + Sbjct: 309 PDFKRDVKRTDNLDELVQASGFSKKHPGDRGLETAVESMRNAVYNSDDDMSNDEAEEENG 368 Query: 263 PSDIDVSEDMDSGEISADELEEEEDEEEDEDEEEKE 298 D ++ E+ E ED+ ED EEE E Sbjct: 369 EGDYSEEDEYYDSELDN---ESSEDDSEDAQEEENE 401 >4N5A-A nrPDB Length = 557 Score = 30.2 bits (66), Expect = 3.9, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 28/50 (56%) Query: 805 IYALLNLMKKNGSQEQELGDIVDEIKLLIEVNGSNKFVMEIAKTLFQQGS 854 +Y+LL + +G Q++ + +I D+ + ++G N F+ +++ + S Sbjct: 449 LYSLLRELDSHGVQKEMMEEIFDKYGKMALLSGLNYFLENVSEPEYTYYS 498 >6FWS-A nrPDB Length = 716 Score = 30.2 bits (66), Expect = 3.9, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 19/61 (31%), Gaps = 6/61 (9%) Query: 427 KKQLNSSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKT 486 K Q+ + Y + P R + + + + + GVGKT Sbjct: 8 KAQIAAWYKALQEQIPDFIPRA-PQR-----QMIADVAKTLAGEEGRHLAIEAPTGVGKT 61 Query: 487 L 487 L Sbjct: 62 L 62 >3PXI-A nrPDB Length = 758 Score = 30.2 bits (66), Expect = 3.9, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 6/83 (7%) Query: 452 RENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPD--FL 509 R E + + + G PGVGKT + ++++++ + D + Sbjct: 185 RSKEIQRVIEVLSRR----TKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM 240 Query: 510 YVEINGLKMVKPTDCYETLWNKV 532 +++ + D + + +++ Sbjct: 241 TLDMGTKYRGEFEDRLKKVMDEI 263 >3PXG-A nrPDB Length = 468 Score = 30.2 bits (66), Expect = 4.1, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 6/83 (7%) Query: 452 RENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPD--FL 509 R E + + + G PGVGKT + ++++++ + D + Sbjct: 185 RSKEIQRVIEVLSRR----TKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM 240 Query: 510 YVEINGLKMVKPTDCYETLWNKV 532 +++ + D + + +++ Sbjct: 241 TLDMGTKYRGEFEDRLKKVMDEI 263 >5CB6-A nrPDB Length = 197 Score = 30.2 bits (66), Expect = 4.3, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 20/46 (43%) Query: 469 SDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFLYVEIN 514 TI++ G G GKT + K+L S + E+ D V N Sbjct: 22 QQRGVTIWLTGLSGAGKTTITHALEKKLRDSGYRLEVLDGDVVRTN 67 >3J3U-A nrPDB Length = 810 Score = 30.2 bits (66), Expect = 4.3, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 8/58 (13%) Query: 452 RENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREIPDFL 509 R E + + + G PGVGKT + +++++ E+P+ L Sbjct: 185 RSKEIQRVIEVLSRR----TKNNPVLIGEPGVGKTAIAEGLAQQIIN----NEVPEIL 234 Score = 30.2 bits (66), Expect = 4.4, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 80/251 (31%), Gaps = 27/251 (10%) Query: 473 TTIYVAGTPGVGKTLTVREVVKELLSSSAQR---EIPDFLYVEINGLKMVKPTDCYETLW 529 + G GVGKT R + + + ++ +++ + P Sbjct: 539 GSFIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSRLVGSP-------- 590 Query: 530 NKVSGERLTWAASMESLEFYFKRVPKNKKKTIVVLLDELDAMVTKSQDIMYNFFNWTTYE 589 L +R P + VVLLD ++ +I+ Sbjct: 591 -----PGYVGYDEGGQLTEKVRRKPYS-----VVLLDAIEKAHPDVFNILLQVLEDGRLT 640 Query: 590 NAKLIVIAVANTMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFY 649 ++K + NT+ + +G R + T K++ D + L +F Sbjct: 641 DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNH-KDMKDKVMGELKRAFRP 699 Query: 650 VDTKTGNAILIDAAGNDTTVKQT--LPEDVRKVRLRMSADAIEI---ASRKVASVSGDAR 704 + I++ + + + L D RL+ +IE+ A KVA D Sbjct: 700 EFINRIDEIIVFHSLEKKHLTEIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLE 759 Query: 705 RALKVCKRAAE 715 + +RA + Sbjct: 760 YGARPLRRAIQ 770 >6FAI-k nrPDB Length = 788 Score = 30.2 bits (66), Expect = 4.4, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 29/170 (17%) Query: 225 QKKDKATQTAQISDAETRATDITDNEDGNEDESSDYESPSDIDVSEDMDSGEISADELEE 284 Q KA SD + + + D D NE+E ++ + D + E D + D E Sbjct: 385 QTSKKAAVPKGTSDYQAKWY-LDDVIDANEEEEAEQTNGKDETMMEIDDEMMVEQDNEEV 443 Query: 285 EEDEEED-EDEE----------EKEARHTNSPRKRGRKI--KLGKDDIDASVQPPPKKRG 331 DEE D ED E E++ R K R+ ++ + +++++ + RG Sbjct: 444 AGDEEYDIEDNEGFEELSPEEEERQLREFRDMEKEDREFPDEIELEPSESAIERLKRYRG 503 Query: 332 RK----------PKDPSKP---RQMLLISSCRANNTPVIRKFTKKNVARA 368 K KDPS P +++L I + + +I++ KN A+A Sbjct: 504 LKNLYNCDWQVDEKDPSSPAEWKRLLRIGNYKNTKNRIIKE--TKNEAQA 551 >6DT0-A nrPDB Length = 458 Score = 29.8 bits (65), Expect = 5.2, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Query: 265 DIDVSEDMDSGEISADELEEEEDEEEDED---EEEKEARHT 302 D+D E D GE D L+EE +DE E+EK+ + T Sbjct: 389 DVDWDETRDVGEDVKDVLDEERSRRDDEHRSIEKEKDEKFT 429 >5V8F-F nrPDB Length = 435 Score = 29.8 bits (65), Expect = 5.3, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 13/107 (12%) Query: 252 GNEDESSDYESPSDIDVSEDMDSGEISADELEEEEDEEEDEDEEEKEARHTNSPRKRGRK 311 GN+ S S I + ++DS DE E E + E EE + + S R + K Sbjct: 194 GNDGLSLKSHSNKSITGTRNVDS-----DEYENHESDPTSE-EEPLGVQESRSGRTKQNK 247 Query: 312 IKLGKDDIDASVQPPPKKRGRKPKDPSKPRQMLLISSCRANNTPVIR 358 +GK + +KRGR P +L+ C+ +IR Sbjct: 248 -AVGKPQSELKTAKALRKRGRIPN------SLLVKKYCKMTTEEIIR 287 >6B5C-A nrPDB Length = 307 Score = 29.8 bits (65), Expect = 5.7, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 11/18 (61%) Query: 475 IYVAGTPGVGKTLTVREV 492 + + G PG GKT+ + V Sbjct: 61 VLMVGPPGTGKTMLAKAV 78 >6B5D-A nrPDB Length = 309 Score = 29.8 bits (65), Expect = 5.7, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 13/21 (61%) Query: 475 IYVAGTPGVGKTLTVREVVKE 495 + +AG PG GKTL R + E Sbjct: 66 MVLAGPPGTGKTLIARAIASE 86 >5WC0-A nrPDB Length = 472 Score = 29.8 bits (65), Expect = 5.7, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 13/21 (61%) Query: 475 IYVAGTPGVGKTLTVREVVKE 495 + +AG PG GKTL R + E Sbjct: 229 MVLAGPPGTGKTLIARAIASE 249 >5VQ9-D nrPDB Length = 432 Score = 29.8 bits (65), Expect = 5.8, Method: Composition-based stats. Identities = 8/29 (27%), Positives = 15/29 (51%) Query: 475 IYVAGTPGVGKTLTVREVVKELLSSSAQR 503 + + G PG GKT + + ++L + R Sbjct: 175 VLLHGPPGTGKTSLCKALAQKLTIRLSSR 203 >4BN2-A nrPDB Length = 361 Score = 29.8 bits (65), Expect = 5.8, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 22/47 (46%) Query: 443 ANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTV 489 + D +E+ FA++ S + S TI+ G G GKT T+ Sbjct: 59 DHVADVDTTQESVFATVAKSIVESCMSGYNGTIFAYGQTGSGKTFTM 105 >1E94-E nrPDB Length = 449 Score = 29.8 bits (65), Expect = 5.9, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 12/27 (44%) Query: 468 ESDSATTIYVAGTPGVGKTLTVREVVK 494 + I + G GVGKT R + K Sbjct: 52 HEVTPKNILMIGPTGVGKTEIARRLAK 78 >1QVR-A nrPDB Length = 854 Score = 29.8 bits (65), Expect = 5.9, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 19/54 (35%), Gaps = 4/54 (7%) Query: 452 RENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVREVVKELLSSSAQREI 505 R+ E + + + G PGVGKT V + + ++ + Sbjct: 175 RDEEIRRVIQIL----LRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGL 224 >3ODP-A nrPDB Length = 393 Score = 29.8 bits (65), Expect = 6.0, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 22/73 (30%), Gaps = 1/73 (1%) Query: 597 AVANTMDLPERQLGNKITSRIGFTRIMFTGYTHEELKNIIDLRLKGLNDSFFYVDTKTGN 656 + N + E L + I I E II + + L K Sbjct: 1 GMKNLLGYSEDYLKER-KGYITAKEICNQPKLWRETYEIILSQREKLKSFLDNFAKKPNA 59 Query: 657 AILIDAAGNDTTV 669 I+I AG+ V Sbjct: 60 KIVITGAGSSAFV 72 >5MM4-K nrPDB Length = 385 Score = 29.0 bits (63), Expect = 9.1, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 8/109 (7%) Query: 431 NSSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVR 490 SY +++ Q + + + + S TI+ G G GKT T+ Sbjct: 67 QKSYHFDQVFGPEADQGMV------YQDVVGPILEEVMSGYNCTIFAYGQTGTGKTHTME 120 Query: 491 EVVKELLS--SSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERL 537 + + SS IP LY + L++ K + + ++ E L Sbjct: 121 GDLTSQMGTYSSEAGIIPRSLYRLFHTLELSKEDYSVKATFIELYNEEL 169 >6GEJ-U nrPDB Length = 471 Score = 29.0 bits (63), Expect = 9.4, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 11/25 (44%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKEL 496 + VAG P GKT V + L Sbjct: 68 GRAVLVAGPPSTGKTALAMGVSQSL 92 >4WW4-B nrPDB Length = 513 Score = 29.0 bits (63), Expect = 9.8, Method: Composition-based stats. Identities = 7/25 (28%), Positives = 11/25 (44%) Query: 472 ATTIYVAGTPGVGKTLTVREVVKEL 496 + +AG P GKT + + L Sbjct: 95 GRAVLIAGPPSTGKTAIAMGMAQSL 119 >5MM7-K nrPDB Length = 457 Score = 29.0 bits (63), Expect = 9.9, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 8/109 (7%) Query: 431 NSSYVKEEILKSANFQDYLPARENEFASIYLSAYSAIESDSATTIYVAGTPGVGKTLTVR 490 SY +++ Q + + + + S TI+ G G GKT T+ Sbjct: 139 QKSYHFDQVFGPEADQGMV------YQDVVGPILEEVMSGYNCTIFAYGQTGTGKTHTME 192 Query: 491 EVVKELLS--SSAQREIPDFLYVEINGLKMVKPTDCYETLWNKVSGERL 537 + + SS IP LY + L++ K + + ++ E L Sbjct: 193 GDLTSQMGTYSSEAGIIPRSLYRLFHTLELSKEDYSVKATFIELYNEEL 241 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.119 0.305 Lambda K H 0.267 0.0369 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,265,018 Number of Sequences: 36641 Number of extensions: 1266552 Number of successful extensions: 7836 Number of sequences better than 10.0: 257 Number of HSP's better than 10.0 without gapping: 197 Number of HSP's successfully gapped in prelim test: 210 Number of HSP's that attempted gapping in prelim test: 5077 Number of HSP's gapped (non-prelim): 1631 length of query: 914 length of database: 10,336,785 effective HSP length: 106 effective length of query: 808 effective length of database: 6,452,839 effective search space: 5213893912 effective search space used: 5213893912 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 63 (29.0 bits)