BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P53905 (115 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6ASO-G nrPDB 233 1e-62 3SWN-C nrPDB 94 1e-20 6QX9-67 nrPDB 90 2e-19 6AH0-d nrPDB 56 4e-09 5LJ3-g nrPDB 51 1e-07 6ASO-C nrPDB 46 3e-06 3JB9-J nrPDB 45 7e-06 6QX9-1b nrPDB 44 1e-05 1TH7-A nrPDB 42 5e-05 3JB9-E nrPDB 41 9e-05 5LQW-b nrPDB 41 9e-05 4M75-A nrPDB 40 2e-04 5ZWM-s nrPDB 40 2e-04 4C8Q-A nrPDB 40 3e-04 4M75-G nrPDB 39 4e-04 6ASO-D nrPDB 39 4e-04 4C8Q-D nrPDB 39 4e-04 4M77-E nrPDB 39 6e-04 3PGG-A nrPDB 38 0.001 6AH0-z nrPDB 37 0.002 3JCR-3 nrPDB 35 0.008 6AH0-t nrPDB 35 0.010 1JBM-A nrPDB 33 0.021 4EMG-A nrPDB 32 0.061 1I8F-A nrPDB 32 0.069 3JB9-H nrPDB 32 0.090 5MKL-A1 nrPDB 31 0.10 6QW6-4e nrPDB 30 0.20 6QDV-e nrPDB 30 0.26 5GMK-i nrPDB 30 0.33 4XQ3-A nrPDB 28 1.2 4JA0-A nrPDB 27 1.4 4XU2-A nrPDB 27 2.1 3M4W-A nrPDB 27 2.5 6N9A-D nrPDB 26 3.0 4PD2-A nrPDB 26 4.7 3SWN-A nrPDB 26 5.0 4EMK-A nrPDB 25 5.2 2OAS-A nrPDB 25 5.2 6BOA-A nrPDB 25 5.8 4OFS-A nrPDB 25 5.9 1TUY-A nrPDB 25 9.1 6QX9-62 nrPDB 25 9.2 >6ASO-G nrPDB Length = 115 Score = 233 bits (594), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 115/115 (100%), Positives = 115/115 (100%) Query: 1 MHQQHSKSENKPQQQRKKFEGPKREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMN 60 MHQQHSKSENKPQQQRKKFEGPKREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMN Sbjct: 1 MHQQHSKSENKPQQQRKKFEGPKREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMN 60 Query: 61 LVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRGTILVSLSSAEGSDVLYMQK 115 LVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRGTILVSLSSAEGSDVLYMQK Sbjct: 61 LVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRGTILVSLSSAEGSDVLYMQK 115 >3SWN-C nrPDB Length = 117 Score = 94.4 bits (233), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 46/98 (46%), Positives = 66/98 (67%), Gaps = 4/98 (4%) Query: 12 PQQQRKKFEGPKREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMS 71 P + E P++E+ILDL++Y+D +I+ GG+ + G+LKG+DQLMNLVLDD E + Sbjct: 14 PGNSSQPTERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLR 73 Query: 72 NPDDENNTELISKNARKLGLTVIRGTILVSLSSAEGSD 109 NP+D T I RKLGL V+RGT LV ++ +GS+ Sbjct: 74 NPEDGKLTGAI----RKLGLVVVRGTTLVLIAPMDGSE 107 >6QX9-67 nrPDB Length = 103 Score = 90.1 bits (222), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 44/92 (47%), Positives = 64/92 (69%), Gaps = 3/92 (3%) Query: 20 EGPKREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNT 79 E K+E+ILDL+KY D IRVK GG+ G+LKG+D L+NLVLD T+EYM +PDD+ Sbjct: 5 EKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYK- 63 Query: 80 ELISKNARKLGLTVIRGTILVSLSSAEGSDVL 111 ++++ R+LGL V RGT +V + +G + + Sbjct: 64 --LTEDTRQLGLVVCRGTSVVLICPQDGMEAI 93 >6AH0-d nrPDB Length = 76 Score = 55.8 bits (133), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 11/78 (14%) Query: 29 DLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARK 88 +L K+ D K+ +KL GG+ V G+L+G+D MNLV+D+ VE M+ +NN Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE-MATSGQQNN---------- 56 Query: 89 LGLTVIRGTILVSLSSAE 106 +G+ VIRG ++ L + E Sbjct: 57 IGMVVIRGNSIIMLEALE 74 >5LJ3-g nrPDB Length = 77 Score = 50.8 bits (120), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 10/80 (12%) Query: 29 DLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARK 88 +L KY D KI + + G + V G+L+GYD +N+VLDD +E ++ D NN + Sbjct: 6 ELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAME-INGEDPANN--------HQ 56 Query: 89 LGL-TVIRGTILVSLSSAEG 107 LGL TVIRG ++SL + + Sbjct: 57 LGLQTVIRGNSIISLEALDA 76 >6ASO-C nrPDB Length = 97 Score = 46.2 bits (108), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 5/86 (5%) Query: 25 EAILDLAKYK-DSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELIS 83 E LDL K D ++ +KL G + ++G L+ +D N+VL D VE + + N E +S Sbjct: 2 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIY----QLNNEELS 57 Query: 84 KNARKLGLTVIRGTILVSLSSAEGSD 109 ++ R+ + IRG + +S+ D Sbjct: 58 ESERRCEMVFIRGDTVTLISTPSEDD 83 >3JB9-J nrPDB Length = 77 Score = 45.1 bits (105), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 11/76 (14%) Query: 29 DLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARK 88 DL KY D ++ V+L G + V GVL+GYD +N+VL+D++E E + K Sbjct: 8 DLKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIE-----------EKVDGEKVK 56 Query: 89 LGLTVIRGTILVSLSS 104 +G IRG ++ + + Sbjct: 57 IGSVAIRGNSVIMIET 72 >6QX9-1b nrPDB Length = 240 Score = 43.9 bits (102), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMS-NPDDENNTELISKNARK 88 + ++ D ++R L G++ IG K +D+ MNL+L D E+ P + E + R Sbjct: 9 MLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAE--REEKRV 66 Query: 89 LGLTVIRGTILVSLS 103 LGL ++RG LVS++ Sbjct: 67 LGLVLLRGENLVSMT 81 >1TH7-A nrPDB Length = 81 Score = 42.4 bits (98), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 13/74 (17%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 LA+ ++ + VKL G K V G+L+ YDQ MNLVL D+ E S+ + +KL Sbjct: 14 LAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDG-----------SGKKL 62 Query: 90 GLTVIRG--TILVS 101 G VIRG IL+S Sbjct: 63 GTIVIRGDNVILIS 76 >3JB9-E nrPDB Length = 147 Score = 41.2 bits (95), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 31/59 (52%) Query: 45 GKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRGTILVSLS 103 G+ +G L +D MNLVL D EY + + + R LGL ++RG +VSLS Sbjct: 21 GRTFVGQLLAFDGFMNLVLSDCQEYRHIKKQNVPSNSVYEEKRMLGLVILRGEFIVSLS 79 >5LQW-b nrPDB Length = 196 Score = 41.2 bits (95), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVE----------YMSNPDDENNT 79 LA D K+RV G++ IG L +D+ MNLVL++ +E D ++ T Sbjct: 12 LANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEERVPKTQLDKLRPRKDSKDGT 71 Query: 80 EL-ISKNARKLGLTVIRGTILVS 101 L I R LGLT++RG ++S Sbjct: 72 TLNIKVEKRVLGLTILRGEQILS 94 >4M75-A nrPDB Length = 144 Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 6/72 (8%) Query: 35 DSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLTVI 94 D KI V L G+++ GVL+ +DQ NL+L D VE + ++ E G+ +I Sbjct: 23 DRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAE------EDRGIFMI 76 Query: 95 RGTILVSLSSAE 106 RG +V L + Sbjct: 77 RGENVVMLGEVD 88 >5ZWM-s nrPDB Length = 187 Score = 40.0 bits (92), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 4/72 (5%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYM--SNPDDENNTELISKNAR 87 L K +++++L G+++ G+L D MNL L + EY S + E+N E S A Sbjct: 7 LTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAE--SSKAV 64 Query: 88 KLGLTVIRGTIL 99 KL IRGT + Sbjct: 65 KLNEIYIRGTFI 76 >4C8Q-A nrPDB Length = 101 Score = 39.7 bits (91), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 6/72 (8%) Query: 35 DSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLTVI 94 D KI V L G+++ GVL+ +DQ NL+L D VE + ++ E G+ +I Sbjct: 7 DRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAE------EDRGIFMI 60 Query: 95 RGTILVSLSSAE 106 RG +V L + Sbjct: 61 RGENVVMLGEVD 72 >4M75-G nrPDB Length = 122 Score = 39.3 bits (90), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 4/72 (5%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYM--SNPDDENNTELISKNAR 87 L K +++++L G+++ G+L D MNL L + EY S + E+N E S A Sbjct: 36 LTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAE--SSKAV 93 Query: 88 KLGLTVIRGTIL 99 KL IRGT + Sbjct: 94 KLNEIYIRGTFI 105 >6ASO-D nrPDB Length = 93 Score = 39.3 bits (90), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 4/72 (5%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYM--SNPDDENNTELISKNAR 87 L K +++++L G+++ G+L D MNL L + EY S + E+N E S A Sbjct: 7 LTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAE--SSKAV 64 Query: 88 KLGLTVIRGTIL 99 KL IRGT + Sbjct: 65 KLNEIYIRGTFI 76 >4C8Q-D nrPDB Length = 114 Score = 39.3 bits (90), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 4/72 (5%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYM--SNPDDENNTELISKNAR 87 L K +++++L G+++ G+L D MNL L + EY S + E+N E S A Sbjct: 7 LTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAE--SSKAV 64 Query: 88 KLGLTVIRGTIL 99 KL IRGT + Sbjct: 65 KLNEIYIRGTFI 76 >4M77-E nrPDB Length = 93 Score = 38.5 bits (88), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 40/69 (57%) Query: 32 KYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGL 91 K + K+ + L + G L G+D +N++L+D VE++ +P+DE+ E + ++ ++ L Sbjct: 14 KTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVEWLIDPEDESRNEKVMQHHGRMLL 73 Query: 92 TVIRGTILV 100 + ILV Sbjct: 74 SGNNIAILV 82 >3PGG-A nrPDB Length = 121 Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 7/66 (10%) Query: 27 ILDLA---KYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELIS 83 IL LA K ++I V + G K GVL+G+D+ +N+VLDD EY D+E+ IS Sbjct: 27 ILPLALIDKCIGNRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQEYGFKADEED----IS 82 Query: 84 KNARKL 89 +KL Sbjct: 83 GGNKKL 88 >6AH0-z nrPDB Length = 96 Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust. Identities = 15/39 (38%), Positives = 26/39 (66%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVE 68 L Y + + V G++++G LKG+DQ +NL+LD++ E Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHE 43 >3JCR-3 nrPDB Length = 102 Score = 35.0 bits (79), Expect = 0.008, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 8/87 (9%) Query: 13 QQQRKKFEGPKREAILDLAKYK-DSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMS 71 QQ E P LDL + D +I VK+ + + G L YDQ +N++L D E ++ Sbjct: 8 QQTTNTVEEP-----LDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVT 62 Query: 72 N--PDDENNTELISKNARKLGLTVIRG 96 D+E E+ R + + +RG Sbjct: 63 TIEIDEETYEEIYKSTKRNIPMLFVRG 89 >6AH0-t nrPDB Length = 91 Score = 34.7 bits (78), Expect = 0.010, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 28/50 (56%) Query: 32 KYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTEL 81 K S+I + + K ++G L G+D +N+VL+D E+ P+ T+L Sbjct: 20 KCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKL 69 >1JBM-A nrPDB Length = 86 Score = 33.5 bits (75), Expect = 0.021, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 L +S + +KL G + GVLK +D MNLVL+D E +D T R+L Sbjct: 18 LGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEEL----EDGEVT-------RRL 66 Query: 90 GLTVIRGTILVSLS 103 G +IRG +V +S Sbjct: 67 GTVLIRGDNIVYIS 80 >4EMG-A nrPDB Length = 93 Score = 32.0 bits (71), Expect = 0.061, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 28 LDLAKYK-DSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDE 76 LDL + D + VKL G + + G L YD+ +N+VL D E ++ DDE Sbjct: 11 LDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDE 60 >1I8F-A nrPDB Length = 81 Score = 32.0 bits (71), Expect = 0.069, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 15/80 (18%) Query: 31 AKYKDS---KIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNAR 87 A +DS ++ VKL + G+L+ +DQ +NL+L+D E+I N Sbjct: 14 ATLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDA------------EEIIDGNVY 61 Query: 88 KLGLTVIRGTILVSLSSAEG 107 K G V+RG ++ +S G Sbjct: 62 KRGTMVVRGENVLFISPVPG 81 >3JB9-H nrPDB Length = 84 Score = 31.6 bits (70), Expect = 0.090, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 11/47 (23%) Query: 50 GVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRG 96 G ++G+D+ MN+VLDD V+ D +N N R+LG +++G Sbjct: 40 GQIRGFDEFMNIVLDDAVQV----DAKN-------NKRELGRILLKG 75 >5MKL-A1 nrPDB Length = 87 Score = 31.2 bits (69), Expect = 0.10, Method: Compositional matrix adjust. Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 9/66 (13%) Query: 38 IRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRGT 97 + VKL G+ +G L+ D MNLVL D EY D K G +IRG+ Sbjct: 20 VLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEYREGTSDP---------VAKYGRVLIRGS 70 Query: 98 ILVSLS 103 ++ +S Sbjct: 71 NILFIS 76 >6QW6-4e nrPDB Length = 92 Score = 30.4 bits (67), Expect = 0.20, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 13/58 (22%) Query: 50 GVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRG---TILVSLSS 104 G + G+D+ MNLVLDD E S +K+ ++LG +++G T+L S+S+ Sbjct: 45 GCIIGFDEYMNLVLDDAEEIHSK----------TKSRKQLGRIMLKGDNITLLQSVSN 92 >6QDV-e nrPDB Length = 81 Score = 30.0 bits (66), Expect = 0.26, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 13/57 (22%) Query: 50 GVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRG---TILVSLS 103 G + G+D+ MNLVLDD E S +K+ ++LG +++G T+L S+S Sbjct: 35 GCIIGFDEYMNLVLDDAEEIHSK----------TKSRKQLGRIMLKGDNITLLQSVS 81 >5GMK-i nrPDB Length = 94 Score = 29.6 bits (65), Expect = 0.33, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 11/74 (14%) Query: 33 YKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLT 92 ++ IR+K GK+V G+D+ MN+V+D+ VE N D E + K LG Sbjct: 32 FEQIGIRIK---GKIV-----GFDEFMNVVIDEAVEIPVNSAD--GKEDVEK-GTPLGKI 80 Query: 93 VIRGTILVSLSSAE 106 +++G + ++SA+ Sbjct: 81 LLKGDNITLITSAD 94 >4XQ3-A nrPDB Length = 91 Score = 27.7 bits (60), Expect = 1.2, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 9/66 (13%) Query: 38 IRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRGT 97 + VKL G IG L+ D MNLVL D E E +E ++K R L IRG+ Sbjct: 24 VLVKLKDGSEYIGKLEQTDGTMNLVLRDCTEI-----REGTSEPVAKYGRVL----IRGS 74 Query: 98 ILVSLS 103 ++ +S Sbjct: 75 NILFIS 80 >4JA0-A nrPDB Length = 425 Score = 27.3 bits (59), Expect = 1.4, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 19/27 (70%) Query: 67 VEYMSNPDDENNTELISKNARKLGLTV 93 V +M +P D+ + + I+K AR+LGL V Sbjct: 270 VVFMGSPADQEHCQKIAKAARELGLDV 296 >4XU2-A nrPDB Length = 270 Score = 26.9 bits (58), Expect = 2.1, Method: Compositional matrix adjust. Identities = 12/29 (41%), Positives = 19/29 (65%) Query: 36 SKIRVKLMGGKLVIGVLKGYDQLMNLVLD 64 S++RV+L GG+ V+G+ + D L LD Sbjct: 225 SRVRVELPGGQDVVGIARDIDDQGRLCLD 253 >3M4W-A nrPDB Length = 295 Score = 26.6 bits (57), Expect = 2.5, Method: Compositional matrix adjust. Identities = 8/27 (29%), Positives = 18/27 (66%) Query: 1 MHQQHSKSENKPQQQRKKFEGPKREAI 27 + +H++ +N+P Q + +GP+RE + Sbjct: 35 LRYRHARLDNRPLAQLLQMDGPRREVV 61 >6N9A-D nrPDB Length = 330 Score = 26.2 bits (56), Expect = 3.0, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 28/53 (52%) Query: 47 LVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRGTIL 99 +V+ V G+ QLM + D ++E + D++ E K AR LGL G ++ Sbjct: 132 VVLMVSGGHTQLMKVDEDYSMEVLGETLDDSAGEAFDKVARLLGLGYPGGPVI 184 >4PD2-A nrPDB Length = 272 Score = 25.8 bits (55), Expect = 4.7, Method: Compositional matrix adjust. Identities = 21/109 (19%), Positives = 47/109 (43%), Gaps = 11/109 (10%) Query: 18 KFEGPKREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYM------- 70 + EG R A LD + K + +K G+L+ ++ + + D + Y Sbjct: 74 RMEGKYRLATLDAPREKHDHLTMKFADGQLIYADVRKFGTWELISTDQVLPYFLKKKIGP 133 Query: 71 ----SNPDDENNTELISKNARKLGLTVIRGTILVSLSSAEGSDVLYMQK 115 + D++ E + K+ +K+ ++ T++ L + +VL++ K Sbjct: 134 EPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAK 182 >3SWN-A nrPDB Length = 82 Score = 25.8 bits (55), Expect = 5.0, Method: Compositional matrix adjust. Identities = 10/20 (50%), Positives = 13/20 (65%) Query: 50 GVLKGYDQLMNLVLDDTVEY 69 G L G+D +N+VL D EY Sbjct: 33 GTLVGFDDYVNIVLKDVTEY 52 >4EMK-A nrPDB Length = 94 Score = 25.4 bits (54), Expect = 5.2, Method: Compositional matrix adjust. Identities = 10/20 (50%), Positives = 13/20 (65%) Query: 50 GVLKGYDQLMNLVLDDTVEY 69 G L G+D +N+VL D EY Sbjct: 45 GTLVGFDDYVNIVLKDVTEY 64 >2OAS-A nrPDB Length = 436 Score = 25.4 bits (54), Expect = 5.2, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 23/47 (48%) Query: 45 GKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGL 91 GKLV G G +L + V D+ + + N+T +I KN + + Sbjct: 258 GKLVTGFALGSQKLYDYVDDNPAVIFMDIEQVNDTSIIRKNPNVMAI 304 >6BOA-A nrPDB Length = 742 Score = 25.4 bits (54), Expect = 5.8, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 8/62 (12%) Query: 5 HSKSENKPQQQRKKFEGP--------KREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYD 56 S+ E QQ++ +E P +A+ L KY+D K+ + G+ + + YD Sbjct: 31 QSRDEQNLLQQKRIWESPLLLAAKDNDVQALNKLLKYEDCKVHQRGAMGETALHIAALYD 90 Query: 57 QL 58 L Sbjct: 91 NL 92 >4OFS-A nrPDB Length = 219 Score = 25.4 bits (54), Expect = 5.9, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 26 AILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDT 66 +ILD AK ++ K+ V ++V +LK Y L N + D+T Sbjct: 45 SILDSAKARNRKVTVTGFLARIVPSILKQYPYL-NAIYDET 84 >1TUY-A nrPDB Length = 399 Score = 24.6 bits (52), Expect = 9.1, Method: Composition-based stats. Identities = 10/21 (47%), Positives = 15/21 (71%) Query: 16 RKKFEGPKREAILDLAKYKDS 36 +KKF+G K E + DL +KD+ Sbjct: 43 QKKFDGKKLEKLTDLPTHKDA 63 >6QX9-62 nrPDB Length = 95 Score = 24.6 bits (52), Expect = 9.2, Method: Compositional matrix adjust. Identities = 18/67 (26%), Positives = 25/67 (37%), Gaps = 23/67 (34%) Query: 48 VIGVLKGYDQLMNLVLDD-----------------------TVEYMSNPDDENNTELISK 84 + G L DQ +N+ L D V Y+ P DE +T+L+ Sbjct: 25 ICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQD 84 Query: 85 NARKLGL 91 ARK L Sbjct: 85 AARKEAL 91 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6ASO-G nrPDB 159 3e-40 3SWN-C nrPDB 120 2e-28 6QX9-67 nrPDB 112 2e-26 6ASO-C nrPDB 90 2e-19 6QX9-1b nrPDB 89 5e-19 3JB9-E nrPDB 88 6e-19 6AH0-d nrPDB 80 2e-16 3JB9-J nrPDB 79 5e-16 4M75-A nrPDB 76 4e-15 4C8Q-A nrPDB 74 1e-14 4M77-E nrPDB 74 1e-14 3PGG-A nrPDB 73 2e-14 5LJ3-g nrPDB 71 8e-14 6AH0-z nrPDB 70 3e-13 1TH7-A nrPDB 69 3e-13 5LQW-b nrPDB 69 5e-13 5ZWM-s nrPDB 66 3e-12 4M75-G nrPDB 66 3e-12 4C8Q-D nrPDB 65 6e-12 6ASO-D nrPDB 64 1e-11 Sequences not found previously or not previously below threshold: 3JCR-3 nrPDB 63 3e-11 1JBM-A nrPDB 62 7e-11 1I8F-A nrPDB 61 9e-11 6AH0-t nrPDB 61 1e-10 4EMG-A nrPDB 61 2e-10 4EMK-A nrPDB 53 3e-08 3SWN-A nrPDB 52 5e-08 4XQ3-A nrPDB 51 1e-07 5MKL-A1 nrPDB 51 2e-07 3SWN-B nrPDB 49 4e-07 6QX9-66 nrPDB 47 1e-06 5GMK-i nrPDB 44 1e-05 3JB9-I nrPDB 43 3e-05 1LJO-A nrPDB 42 4e-05 6QW6-4e nrPDB 42 4e-05 3JB9-H nrPDB 42 4e-05 4EMH-A nrPDB 41 1e-04 6QDV-e nrPDB 41 1e-04 5MQF-a nrPDB 41 1e-04 5VSU-F nrPDB 41 2e-04 6QDV-f nrPDB 39 4e-04 5Z58-f nrPDB 39 4e-04 5GM6-g nrPDB 39 4e-04 1N9R-A nrPDB 39 5e-04 1M5Q-A nrPDB 39 6e-04 6J6Q-g nrPDB 38 7e-04 6QW6-64 nrPDB 37 0.001 4C8Q-B nrPDB 37 0.002 5VSU-B nrPDB 36 0.003 4N0A-C nrPDB 36 0.003 5GMK-m nrPDB 36 0.004 3JB9-G nrPDB 35 0.007 6QX9-62 nrPDB 34 0.018 5XJU-A nrPDB 31 0.096 4WZJ-C nrPDB 31 0.14 3STJ-A nrPDB 30 0.22 3STI-A nrPDB 30 0.22 4A8B-A nrPDB 30 0.27 1O8B-A nrPDB 29 0.46 6OIX-A nrPDB 29 0.58 4XU2-A nrPDB 28 0.78 4OFS-A nrPDB 27 2.0 3OH9-A nrPDB 27 2.7 2HO9-A nrPDB 25 6.0 5HS2-A nrPDB 25 7.6 6MTD-v nrPDB 25 9.9 >6ASO-G nrPDB Length = 115 Score = 159 bits (401), Expect = 3e-40, Method: Composition-based stats. Identities = 115/115 (100%), Positives = 115/115 (100%) Query: 1 MHQQHSKSENKPQQQRKKFEGPKREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMN 60 MHQQHSKSENKPQQQRKKFEGPKREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMN Sbjct: 1 MHQQHSKSENKPQQQRKKFEGPKREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMN 60 Query: 61 LVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRGTILVSLSSAEGSDVLYMQK 115 LVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRGTILVSLSSAEGSDVLYMQK Sbjct: 61 LVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRGTILVSLSSAEGSDVLYMQK 115 >3SWN-C nrPDB Length = 117 Score = 120 bits (300), Expect = 2e-28, Method: Composition-based stats. Identities = 46/100 (46%), Positives = 67/100 (67%), Gaps = 4/100 (4%) Query: 12 PQQQRKKFEGPKREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMS 71 P + E P++E+ILDL++Y+D +I+ GG+ + G+LKG+DQLMNLVLDD E + Sbjct: 14 PGNSSQPTERPRKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLR 73 Query: 72 NPDDENNTELISKNARKLGLTVIRGTILVSLSSAEGSDVL 111 NP+D T I RKLGL V+RGT LV ++ +GS+ + Sbjct: 74 NPEDGKLTGAI----RKLGLVVVRGTTLVLIAPMDGSEEI 109 >6QX9-67 nrPDB Length = 103 Score = 112 bits (281), Expect = 2e-26, Method: Composition-based stats. Identities = 44/92 (47%), Positives = 64/92 (69%), Gaps = 3/92 (3%) Query: 20 EGPKREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNT 79 E K+E+ILDL+KY D IRVK GG+ G+LKG+D L+NLVLD T+EYM +PDD+ Sbjct: 5 EKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQY-- 62 Query: 80 ELISKNARKLGLTVIRGTILVSLSSAEGSDVL 111 ++++ R+LGL V RGT +V + +G + + Sbjct: 63 -KLTEDTRQLGLVVCRGTSVVLICPQDGMEAI 93 >6ASO-C nrPDB Length = 97 Score = 89.8 bits (221), Expect = 2e-19, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 5/86 (5%) Query: 25 EAILDLAKY-KDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELIS 83 E LDL K D ++ +KL G + ++G L+ +D N+VL D VE + + N E +S Sbjct: 2 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETIY----QLNNEELS 57 Query: 84 KNARKLGLTVIRGTILVSLSSAEGSD 109 ++ R+ + IRG + +S+ D Sbjct: 58 ESERRCEMVFIRGDTVTLISTPSEDD 83 >6QX9-1b nrPDB Length = 240 Score = 88.7 bits (218), Expect = 5e-19, Method: Composition-based stats. Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMS-NPDDENNTELISKNARK 88 + ++ D ++R L G++ IG K +D+ MNL+L D E+ P + E + R Sbjct: 9 MLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAE--REEKRV 66 Query: 89 LGLTVIRGTILVSLS 103 LGL ++RG LVS++ Sbjct: 67 LGLVLLRGENLVSMT 81 >3JB9-E nrPDB Length = 147 Score = 88.3 bits (217), Expect = 6e-19, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 35/74 (47%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 + + + V G+ +G L +D MNLVL D EY + + + R L Sbjct: 6 MVSLLNHSLNVTTKDGRTFVGQLLAFDGFMNLVLSDCQEYRHIKKQNVPSNSVYEEKRML 65 Query: 90 GLTVIRGTILVSLS 103 GL ++RG +VSLS Sbjct: 66 GLVILRGEFIVSLS 79 >6AH0-d nrPDB Length = 76 Score = 79.8 bits (195), Expect = 2e-16, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 11/83 (13%) Query: 24 REAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELIS 83 + +L K+ D K+ +KL GG+ V G+L+G+D MNLV+D+ VE ++ N Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNN------ 56 Query: 84 KNARKLGLTVIRGTILVSLSSAE 106 +G+ VIRG ++ L + E Sbjct: 57 -----IGMVVIRGNSIIMLEALE 74 >3JB9-J nrPDB Length = 77 Score = 78.7 bits (192), Expect = 5e-16, Method: Composition-based stats. Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 11/80 (13%) Query: 29 DLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARK 88 DL KY D ++ V+L G + V GVL+GYD +N+VL+D++E E + K Sbjct: 8 DLKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIE-----------EKVDGEKVK 56 Query: 89 LGLTVIRGTILVSLSSAEGS 108 +G IRG ++ + + + Sbjct: 57 IGSVAIRGNSVIMIETLDKM 76 >4M75-A nrPDB Length = 144 Score = 75.6 bits (184), Expect = 4e-15, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 6/73 (8%) Query: 34 KDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLTV 93 D KI V L G+++ GVL+ +DQ NL+L D VE + ++ E G+ + Sbjct: 22 VDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEE------DRGIFM 75 Query: 94 IRGTILVSLSSAE 106 IRG +V L + Sbjct: 76 IRGENVVMLGEVD 88 >4C8Q-A nrPDB Length = 101 Score = 74.4 bits (181), Expect = 1e-14, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 6/73 (8%) Query: 34 KDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLTV 93 D KI V L G+++ GVL+ +DQ NL+L D VE + ++ E G+ + Sbjct: 6 VDRKIFVLLRDGRMLFGVLRTFDQYANLILQDCVERIYFSEENKYAEE------DRGIFM 59 Query: 94 IRGTILVSLSSAE 106 IRG +V L + Sbjct: 60 IRGENVVMLGEVD 72 >4M77-E nrPDB Length = 93 Score = 74.4 bits (181), Expect = 1e-14, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 3/88 (3%) Query: 27 ILDLA---KYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELIS 83 IL L K + K+ + L + G L G+D +N++L+D VE++ +P+DE+ E + Sbjct: 6 ILPLEVIDKTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVEWLIDPEDESRNEKVM 65 Query: 84 KNARKLGLTVIRGTILVSLSSAEGSDVL 111 ++ ++ L+ ILV ++ L Sbjct: 66 QHHGRMLLSGNNIAILVPGGKKTPTEAL 93 >3PGG-A nrPDB Length = 121 Score = 73.3 bits (178), Expect = 2e-14, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 7/104 (6%) Query: 8 SENKPQQQRKKFEGPKREAILDLA---KYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLD 64 SE + + IL LA K ++I V + G K GVL+G+D+ +N+VLD Sbjct: 8 SETPANKSQGGSNQKGGNIILPLALIDKCIGNRIYVVMKGDKEFSGVLRGFDEYVNMVLD 67 Query: 65 DTVEYMSNPDDENNTELISKNAR----KLGLTVIRGTILVSLSS 104 D EY D+E+ + K R +L ++ G + L Sbjct: 68 DVQEYGFKADEEDISGGNKKLKRVMVNRLETILLSGNNVAMLVP 111 >5LJ3-g nrPDB Length = 77 Score = 71.3 bits (173), Expect = 8e-14, Method: Composition-based stats. Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 10/80 (12%) Query: 29 DLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARK 88 +L KY D KI + + G + V G+L+GYD +N+VLDD +E ++ D NN + Sbjct: 6 ELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAME-INGEDPANN--------HQ 56 Query: 89 LGL-TVIRGTILVSLSSAEG 107 LGL TVIRG ++SL + + Sbjct: 57 LGLQTVIRGNSIISLEALDA 76 >6AH0-z nrPDB Length = 96 Score = 69.8 bits (169), Expect = 3e-13, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 7/79 (8%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 L Y + + V G++++G LKG+DQ +NL+LD++ E + + L Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQG-------VEQVVL 57 Query: 90 GLTVIRGTILVSLSSAEGS 108 GL ++RG + + + Sbjct: 58 GLYIVRGDNVAVIGEIDEE 76 >1TH7-A nrPDB Length = 81 Score = 69.4 bits (168), Expect = 3e-13, Method: Composition-based stats. Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 11/79 (13%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 LA+ ++ + VKL G K V G+L+ YDQ MNLVL D+ E S+ + +KL Sbjct: 14 LAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSD-----------GSGKKL 62 Query: 90 GLTVIRGTILVSLSSAEGS 108 G VIRG ++ +S + S Sbjct: 63 GTIVIRGDNVILISPLQTS 81 >5LQW-b nrPDB Length = 196 Score = 69.0 bits (167), Expect = 5e-13, Method: Composition-based stats. Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 11/83 (13%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVE----------YMSNPDDENNT 79 LA D K+RV G++ IG L +D+ MNLVL++ +E D ++ T Sbjct: 12 LANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIEERVPKTQLDKLRPRKDSKDGT 71 Query: 80 EL-ISKNARKLGLTVIRGTILVS 101 L I R LGLT++RG ++S Sbjct: 72 TLNIKVEKRVLGLTILRGEQILS 94 >5ZWM-s nrPDB Length = 187 Score = 66.3 bits (160), Expect = 3e-12, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 35/77 (45%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 L K +++++L G+++ G+L D MNL L + EY + S A KL Sbjct: 7 LTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSKAVKL 66 Query: 90 GLTVIRGTILVSLSSAE 106 IRGT + + + Sbjct: 67 NEIYIRGTFIKFIKLQD 83 >4M75-G nrPDB Length = 122 Score = 66.3 bits (160), Expect = 3e-12, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 35/77 (45%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 L K +++++L G+++ G+L D MNL L + EY + S A KL Sbjct: 36 LTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSKAVKL 95 Query: 90 GLTVIRGTILVSLSSAE 106 IRGT + + + Sbjct: 96 NEIYIRGTFIKFIKLQD 112 >4C8Q-D nrPDB Length = 114 Score = 65.2 bits (157), Expect = 6e-12, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 35/77 (45%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 L K +++++L G+++ G+L D MNL L + EY + S A KL Sbjct: 7 LTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSKAVKL 66 Query: 90 GLTVIRGTILVSLSSAE 106 IRGT + + + Sbjct: 67 NEIYIRGTFIKFIKLQD 83 >6ASO-D nrPDB Length = 93 Score = 64.4 bits (155), Expect = 1e-11, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 35/77 (45%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 L K +++++L G+++ G+L D MNL L + EY + S A KL Sbjct: 7 LTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESSKAVKL 66 Query: 90 GLTVIRGTILVSLSSAE 106 IRGT + + + Sbjct: 67 NEIYIRGTFIKFIKLQD 83 >3JCR-3 nrPDB Length = 102 Score = 62.9 bits (151), Expect = 3e-11, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 3/84 (3%) Query: 25 EAILDLAKY-KDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSN--PDDENNTEL 81 E LDL + D +I VK+ + + G L YDQ +N++L D E ++ D+E E+ Sbjct: 15 EEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEI 74 Query: 82 ISKNARKLGLTVIRGTILVSLSSA 105 R + + +RG +V ++ Sbjct: 75 YKSTKRNIPMLFVRGDGVVLVAPP 98 >1JBM-A nrPDB Length = 86 Score = 61.7 bits (148), Expect = 7e-11, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 12/86 (13%) Query: 19 FEGPKREAILD-LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDEN 77 + + LD L +S + +KL G + GVLK +D MNLVL+D E Sbjct: 6 SQRVNVQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEEL-------- 57 Query: 78 NTELISKNARKLGLTVIRGTILVSLS 103 + R+LG +IRG +V +S Sbjct: 58 ---EDGEVTRRLGTVLIRGDNIVYIS 80 >1I8F-A nrPDB Length = 81 Score = 61.3 bits (147), Expect = 9e-11, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 12/78 (15%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 L ++ VKL + G+L+ +DQ +NL+L+D E I N K Sbjct: 16 LQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEI------------IDGNVYKR 63 Query: 90 GLTVIRGTILVSLSSAEG 107 G V+RG ++ +S G Sbjct: 64 GTMVVRGENVLFISPVPG 81 >6AH0-t nrPDB Length = 91 Score = 60.6 bits (145), Expect = 1e-10, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 9/87 (10%) Query: 19 FEGPKREAILDLA-KYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDEN 77 P + L+L K S+I + + K ++G L G+D +N+VL+D E+ P+ Sbjct: 6 TTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65 Query: 78 NTELISKNARKLGLTVIRGTILVSLSS 104 T KL ++ G + L Sbjct: 66 IT--------KLDQILLNGNNITMLVP 84 >4EMG-A nrPDB Length = 93 Score = 60.6 bits (145), Expect = 2e-10, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 3/82 (3%) Query: 27 ILDLAKY-KDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVE--YMSNPDDENNTELIS 83 LDL + D + VKL G + + G L YD+ +N+VL D E + + ++ + + + Sbjct: 10 PLDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIVTIFDDEETDKDKALK 69 Query: 84 KNARKLGLTVIRGTILVSLSSA 105 + + +RG ++ ++ Sbjct: 70 TIRKHYEMLFVRGDSVILIAPP 91 >4EMK-A nrPDB Length = 94 Score = 53.2 bits (126), Expect = 3e-08, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 13/88 (14%) Query: 20 EGPKREAILDLA---KYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDE 76 + P IL L K S + V + + G L G+D +N+VL D EY Sbjct: 12 QDPMSMTILPLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEY------- 64 Query: 77 NNTELISKNARKLGLTVIRGTILVSLSS 104 + ++ K ++ G + L Sbjct: 65 ---DTVTGVTEKHSEMLLNGNGMCMLIP 89 >3SWN-A nrPDB Length = 82 Score = 52.5 bits (124), Expect = 5e-08, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 13/82 (15%) Query: 26 AILDLA---KYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELI 82 IL L K S + V + + G L G+D +N+VL D EY + + Sbjct: 6 TILPLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEY----------DTV 55 Query: 83 SKNARKLGLTVIRGTILVSLSS 104 + K ++ G + L Sbjct: 56 TGVTEKHSEMLLNGNGMCMLIP 77 >4XQ3-A nrPDB Length = 91 Score = 50.5 bits (119), Expect = 1e-07, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 10/82 (12%) Query: 23 KREAILD-LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTEL 81 K E L L + + VKL G IG L+ D MNLVL D E E Sbjct: 8 KVENPLKSLRTAINRIVLVKLKDGSEYIGKLEQTDGTMNLVLRDCTEIR---------EG 58 Query: 82 ISKNARKLGLTVIRGTILVSLS 103 S+ K G +IRG+ ++ +S Sbjct: 59 TSEPVAKYGRVLIRGSNILFIS 80 >5MKL-A1 nrPDB Length = 87 Score = 50.5 bits (119), Expect = 2e-07, Method: Composition-based stats. Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 10/82 (12%) Query: 23 KREAIL-DLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTEL 81 K E L L + + VKL G+ +G L+ D MNLVL D EY E Sbjct: 4 KIENPLKSLKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEYR---------EG 54 Query: 82 ISKNARKLGLTVIRGTILVSLS 103 S K G +IRG+ ++ +S Sbjct: 55 TSDPVAKYGRVLIRGSNILFIS 76 >3SWN-B nrPDB Length = 77 Score = 49.0 bits (115), Expect = 4e-07, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 11/77 (14%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 L K K+ ++L G G+L D MNL L+ T EY++ Sbjct: 11 LNKVIGKKVLIRLSSGVDYKGILSCLDGYMNLALERTEEYVNGKKTNVY----------- 59 Query: 90 GLTVIRGTILVSLSSAE 106 G IRG ++ +S+ + Sbjct: 60 GDAFIRGNNVLYVSALD 76 >6QX9-66 nrPDB Length = 80 Score = 47.5 bits (111), Expect = 1e-06, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 12/84 (14%) Query: 23 KREAILD-LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTEL 81 +++ D L + + VKL G GVL D MN+ L+ T EY++ Sbjct: 4 RKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNG--------- 54 Query: 82 ISKNARKLGLTVIRGTILVSLSSA 105 + K G IRG ++ +S+ Sbjct: 55 --QLKNKYGDAFIRGNNVLYISTQ 76 >5GMK-i nrPDB Length = 94 Score = 44.4 bits (103), Expect = 1e-05, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%) Query: 45 GKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRGTILVSLSS 104 G + G + G+D+ MN+V+D+ VE N D + LG +++G + ++S Sbjct: 36 GIRIKGKIVGFDEFMNVVIDEAVEIPVNSADGK---EDVEKGTPLGKILLKGDNITLITS 92 Query: 105 AE 106 A+ Sbjct: 93 AD 94 >3JB9-I nrPDB Length = 78 Score = 43.2 bits (100), Expect = 3e-05, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 11/75 (14%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 L + V+L G+ G L+ D MNL L + E + + L Sbjct: 12 LQGLIGKPVLVRLKWGQEYKGTLQSVDSYMNLQLLNAEELVDGVKTGD-----------L 60 Query: 90 GLTVIRGTILVSLSS 104 G +IR ++ + Sbjct: 61 GEILIRCNNVLWVGE 75 >1LJO-A nrPDB Length = 77 Score = 42.4 bits (98), Expect = 4e-05, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 12/79 (15%) Query: 30 LAKYKDSKIRVKLMGGK-LVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARK 88 + IRV++ G + ++G L+G D MNL L + +E + R Sbjct: 10 VKSMVGKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAMEC-----------KGEEKVRS 58 Query: 89 LGLTVIRGTILVSLSSAEG 107 LG V+RG +V + E Sbjct: 59 LGEIVLRGNNVVLIQPQEE 77 >6QW6-4e nrPDB Length = 92 Score = 42.4 bits (98), Expect = 4e-05, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 14/96 (14%) Query: 15 QRKKFEGPKREAILDLAKYKDSKIRVKL----MGGKLVIGVLKGYDQLMNLVLDDTVEYM 70 Q +K + + I + +Y ++ R+++ + G + G+D+ MNLVLDD E Sbjct: 6 QGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIH 65 Query: 71 SNPDDENNTELISKNARKLGLTVIRGTILVSLSSAE 106 S +K+ ++LG +++G + L S Sbjct: 66 SK----------TKSRKQLGRIMLKGDNITLLQSVS 91 >3JB9-H nrPDB Length = 84 Score = 42.4 bits (98), Expect = 4e-05, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 11/58 (18%) Query: 48 VIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRGTILVSLSSA 105 + G ++G+D+ MN+VLDD V+ N R+LG +++G + + + Sbjct: 38 LQGQIRGFDEFMNIVLDDAVQV-----------DAKNNKRELGRILLKGDNITLIQAI 84 >4EMH-A nrPDB Length = 105 Score = 41.3 bits (95), Expect = 1e-04, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 11/82 (13%) Query: 27 ILDLAKY-KDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKN 85 L L + I V+L G+ G L+ D MNL L + + M + D Sbjct: 17 PLTLLNATQGRPILVELKNGETFNGHLENCDNYMNLTLREVIRTMPDGD----------K 66 Query: 86 ARKLGLTVIRGTILVSLSSAEG 107 +L IRG + L + Sbjct: 67 FFRLPECYIRGNNIKYLRIQDE 88 >6QDV-e nrPDB Length = 81 Score = 41.3 bits (95), Expect = 1e-04, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 14/79 (17%) Query: 32 KYKDSKIRVKL----MGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNAR 87 +Y ++ R+++ + G + G+D+ MNLVLDD E S +K+ + Sbjct: 13 RYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSK----------TKSRK 62 Query: 88 KLGLTVIRGTILVSLSSAE 106 +LG +++G + L S Sbjct: 63 QLGRIMLKGDNITLLQSVS 81 >5MQF-a nrPDB Length = 118 Score = 40.9 bits (94), Expect = 1e-04, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 34/80 (42%), Gaps = 3/80 (3%) Query: 26 AILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEY---MSNPDDENNTELI 82 ++L + ++++ + K ++G +K +D+ N+VL++ E + Sbjct: 30 SVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKP 89 Query: 83 SKNARKLGLTVIRGTILVSL 102 R + +RG ++ + Sbjct: 90 VNKDRYISKMFLRGDSVIVV 109 >5VSU-F nrPDB Length = 88 Score = 40.5 bits (93), Expect = 2e-04, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 7/76 (9%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 L+ + VKL G L G L+ D MN+ L E+ + +++ + S Sbjct: 18 LSDIIGKTVNVKLASGLLYSGRLESIDGFMNVALSSATEHYESNNNKLLNKFNSD----- 72 Query: 90 GLTVIRGTILVSLSSA 105 +RGT ++ +S Sbjct: 73 --VFLRGTQVMYISEQ 86 >6QDV-f nrPDB Length = 72 Score = 39.4 bits (90), Expect = 4e-04, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 11/73 (15%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 L + VKL G G L D MN+ L +T EY+ + L Sbjct: 8 LNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGH-----------L 56 Query: 90 GLTVIRGTILVSL 102 G +IR ++ + Sbjct: 57 GEVLIRCNNVLYI 69 >5Z58-f nrPDB Length = 86 Score = 39.4 bits (90), Expect = 4e-04, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 11/73 (15%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 L + VKL G G L D MN+ L +T EY+ + L Sbjct: 11 LNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGH-----------L 59 Query: 90 GLTVIRGTILVSL 102 G +IR ++ + Sbjct: 60 GEVLIRCNNVLYI 72 >5GM6-g nrPDB Length = 94 Score = 39.4 bits (90), Expect = 4e-04, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 29/65 (44%), Gaps = 4/65 (6%) Query: 38 IRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRGT 97 + + L +I +K +D+ N+VL++ E + +N + R + +RG Sbjct: 30 VIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKN----VINRERFISKLFLRGD 85 Query: 98 ILVSL 102 ++ + Sbjct: 86 SVIVV 90 >1N9R-A nrPDB Length = 93 Score = 39.0 bits (89), Expect = 5e-04, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 12/77 (15%) Query: 30 LAKYKDSKIRVKLM-GGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARK 88 L + ++ VKL G L D NL L++ E+++ + Sbjct: 26 LKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAG-----------VSHGT 74 Query: 89 LGLTVIRGTILVSLSSA 105 LG IR ++ + Sbjct: 75 LGEIFIRCNNVLYIREL 91 >1M5Q-A nrPDB Length = 130 Score = 38.6 bits (88), Expect = 6e-04, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 21/40 (52%) Query: 27 ILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDT 66 + +L +++V L G++ GVL D +N+VL + Sbjct: 2 VAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANA 41 >6J6Q-g nrPDB Length = 110 Score = 38.2 bits (87), Expect = 7e-04, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 29/65 (44%), Gaps = 4/65 (6%) Query: 38 IRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRGT 97 + + L +I +K +D+ N+VL++ E + +N + R + +RG Sbjct: 44 VIISLRNNHKIIARVKAFDRHCNMVLENVKELWTEKKGKN----VINRERFISKLFLRGD 99 Query: 98 ILVSL 102 ++ + Sbjct: 100 SVIVV 104 >6QW6-64 nrPDB Length = 139 Score = 37.4 bits (85), Expect = 0.001, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 10/78 (12%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 L ++ + V+L G+ G L D MN+ L + + + D ++ Sbjct: 7 LKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGD----------KFWRM 56 Query: 90 GLTVIRGTILVSLSSAEG 107 IRG+ + L + Sbjct: 57 PECYIRGSTIKYLRIPDE 74 >4C8Q-B nrPDB Length = 105 Score = 36.7 bits (83), Expect = 0.002, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 9/69 (13%) Query: 31 AKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLG 90 D ++ V+L + G L+ DQ +NL LD+ +S D++ L S Sbjct: 18 KTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDN----ISCTDEKKYPHLGSVRN---- 69 Query: 91 LTVIRGTIL 99 IRG+ + Sbjct: 70 -IFIRGSTV 77 >5VSU-B nrPDB Length = 98 Score = 36.3 bits (82), Expect = 0.003, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 9/69 (13%) Query: 31 AKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLG 90 D ++ V+L + G L+ DQ +NL LD+ +S D++ L S Sbjct: 11 KTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDN----ISCTDEKKYPHLGSVRN---- 62 Query: 91 LTVIRGTIL 99 IRG+ + Sbjct: 63 -IFIRGSTV 70 >4N0A-C nrPDB Length = 109 Score = 36.3 bits (82), Expect = 0.003, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 9/69 (13%) Query: 31 AKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLG 90 D ++ V+L + G L+ DQ +NL LD+ +S D++ L S Sbjct: 22 KTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDN----ISCTDEKKYPHLGSVRN---- 73 Query: 91 LTVIRGTIL 99 IRG+ + Sbjct: 74 -IFIRGSTV 81 >5GMK-m nrPDB Length = 146 Score = 35.9 bits (81), Expect = 0.004, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 21/50 (42%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNT 79 L K ++ ++ ++L G V G L+ MN +L D + P Sbjct: 7 LKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLN 56 >3JB9-G nrPDB Length = 115 Score = 35.1 bits (79), Expect = 0.007, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 31/79 (39%), Gaps = 2/79 (2%) Query: 26 AILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDD--ENNTELIS 83 ++L A ++ + K ++ +K +D+ N+VL++ E + Sbjct: 31 SVLQQAVKNHDQVLINCRNNKKLLARVKAFDRHSNMVLENVKEMWTEKKRTASGKKGKAI 90 Query: 84 KNARKLGLTVIRGTILVSL 102 R + +RG +V + Sbjct: 91 NKDRFISKMFLRGDGVVLV 109 >6QX9-62 nrPDB Length = 95 Score = 33.6 bits (75), Expect = 0.018, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 10/85 (11%) Query: 31 AKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLG 90 + V+L + G L DQ +N+ L D +S D E ++S Sbjct: 8 KSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTD----ISVTDPEKYPHMLSVKN---- 59 Query: 91 LTVIRGTILVSLS-SAEGSDVLYMQ 114 IRG+++ + A+ D +Q Sbjct: 60 -CFIRGSVVRYVQLPADEVDTQLLQ 83 >5XJU-A nrPDB Length = 82 Score = 31.3 bits (69), Expect = 0.096, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 L K + ++L G V G + G D MN L + N + +L Sbjct: 7 LMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP-----------VQL 55 Query: 90 GLTVIRGTIL 99 IRG + Sbjct: 56 ETLSIRGNNI 65 >4WZJ-C nrPDB Length = 118 Score = 30.9 bits (68), Expect = 0.14, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 11/70 (15%) Query: 30 LAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKL 89 L K + ++L G V G + G D MN L + N + +L Sbjct: 7 LMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREP-----------VQL 55 Query: 90 GLTVIRGTIL 99 IRG + Sbjct: 56 ETLSIRGNNI 65 >3STJ-A nrPDB Length = 345 Score = 30.1 bits (66), Expect = 0.22, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 10/65 (15%) Query: 9 ENKPQQQRKKFEGPKREAILDLAK----------YKDSKIRVKLMGGKLVIGVLKGYDQL 58 ++ P Q + FEG I++ +K + KI ++L G+ L G D Sbjct: 51 DDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQ 110 Query: 59 MNLVL 63 ++ L Sbjct: 111 SDIAL 115 >3STI-A nrPDB Length = 245 Score = 30.1 bits (66), Expect = 0.22, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 10/65 (15%) Query: 9 ENKPQQQRKKFEGPKREAILDLAK----------YKDSKIRVKLMGGKLVIGVLKGYDQL 58 ++ P Q + FEG I++ +K + KI ++L G+ L G D Sbjct: 51 DDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQ 110 Query: 59 MNLVL 63 ++ L Sbjct: 111 SDIAL 115 >4A8B-A nrPDB Length = 436 Score = 29.7 bits (65), Expect = 0.27, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 10/65 (15%) Query: 9 ENKPQQQRKKFEGPKREAILDLAK----------YKDSKIRVKLMGGKLVIGVLKGYDQL 58 ++ P Q + FEG I++ +K + KI ++L G+ L G D Sbjct: 51 DDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQ 110 Query: 59 MNLVL 63 ++ L Sbjct: 111 SDIAL 115 >1O8B-A nrPDB Length = 219 Score = 29.0 bits (63), Expect = 0.46, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 4/86 (4%) Query: 27 ILDLAKYKDSKIRVKLMGGKLV-IGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKN 85 ++ +A+ ++ VKL G GV+ N++LD + +P N Sbjct: 135 VIPMARSAVARQLVKLGGRPEYRQGVVT---DNGNVILDVHGMEILDPIAMENAINAIPG 191 Query: 86 ARKLGLTVIRGTILVSLSSAEGSDVL 111 +GL RG + + + +G + Sbjct: 192 VVTVGLFANRGADVALIGTPDGVKTI 217 >6OIX-A nrPDB Length = 505 Score = 28.6 bits (62), Expect = 0.58, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 21/35 (60%) Query: 39 RVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNP 73 R++L G +++ G+L+ Y L++L L D E + Sbjct: 398 RLELQGYRVISGLLEIYRPLLSLSLSDFTELVEKE 432 >4XU2-A nrPDB Length = 270 Score = 28.2 bits (61), Expect = 0.78, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 19/32 (59%) Query: 33 YKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLD 64 S++RV+L GG+ V+G+ + D L LD Sbjct: 222 TIGSRVRVELPGGQDVVGIARDIDDQGRLCLD 253 >4OFS-A nrPDB Length = 219 Score = 27.0 bits (58), Expect = 2.0, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Query: 26 AILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDT 66 +ILD AK ++ K+ V ++V +LK Y +N + D+T Sbjct: 45 SILDSAKARNRKVTVTGFLARIVPSILKQY-PYLNAIYDET 84 >3OH9-A nrPDB Length = 289 Score = 26.7 bits (57), Expect = 2.7, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 10/71 (14%) Query: 43 MGGKLVIGVLKGYDQLMNLV----------LDDTVEYMSNPDDENNTELISKNARKLGLT 92 G + ++G L L LDD EY+ P + + + LG+ Sbjct: 123 QGVRAILGQLVSVAMAAKLTARVAQLYGERLDDFPEYICFPTPQRLAAADPQALKALGMP 182 Query: 93 VIRGTILVSLS 103 + R L+ L+ Sbjct: 183 LKRAEALIHLA 193 >2HO9-A nrPDB Length = 167 Score = 25.5 bits (54), Expect = 6.0, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 4/81 (4%) Query: 33 YKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLT 92 Y D+ + + L G+ V+G++ ++ VL T E + P E L ++ LG Sbjct: 82 YNDNTVVIVLNLGQRVVGIVV---DGVSDVLSLTAEQIR-PAPEFAVTLSTEYLTGLGAL 137 Query: 93 VIRGTILVSLSSAEGSDVLYM 113 R ILV++ S+ + + Sbjct: 138 GDRMLILVNIEKLLNSEEMAL 158 >5HS2-A nrPDB Length = 232 Score = 25.1 bits (53), Expect = 7.6, Method: Composition-based stats. Identities = 6/23 (26%), Positives = 14/23 (60%) Query: 36 SKIRVKLMGGKLVIGVLKGYDQL 58 +K+ ++L G ++I L+ +D Sbjct: 21 NKLFIELKGDPVIIHTLRVFDSH 43 >6MTD-v nrPDB Length = 839 Score = 24.7 bits (52), Expect = 9.9, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 5/70 (7%) Query: 51 VLKGYDQLMNLVLDDTVEYMSNPDDENNTELISKNARKLGLTVIR-----GTILVSLSSA 105 + K +D +MN ++T + + D + ++E K + L V+R G L+ + + Sbjct: 278 IFKVFDAIMNFKKEETAKLIEKLDIKLDSEDKDKEGKPLLKAVMRRWLPAGDALLQMITI 337 Query: 106 EGSDVLYMQK 115 + QK Sbjct: 338 HLPSPVTAQK 347 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.306 0.126 0.311 Lambda K H 0.267 0.0390 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,760,456 Number of Sequences: 36641 Number of extensions: 126353 Number of successful extensions: 437 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 309 Number of HSP's gapped (non-prelim): 124 length of query: 115 length of database: 10,336,785 effective HSP length: 80 effective length of query: 35 effective length of database: 7,405,505 effective search space: 259192675 effective search space used: 259192675 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.5 bits) S2: 52 (24.7 bits)