BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P53853 (264 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3Q68-A nrPDB 539 e-154 3Q35-B nrPDB 479 e-136 5GPL-A nrPDB 65 3e-11 5ZB5-A nrPDB 63 1e-10 5DAY-A nrPDB 48 5e-06 5X7V-A nrPDB 36 0.015 2E50-A nrPDB 35 0.027 3FS3-A nrPDB 33 0.13 3GYW-A nrPDB 32 0.23 3OIS-A nrPDB 29 1.9 6FA9-A nrPDB 29 2.2 2G18-A nrPDB 28 3.6 4RSI-A nrPDB 27 6.2 4WKT-C nrPDB 27 8.1 5UBK-A nrPDB 27 9.6 >3Q68-A nrPDB Length = 264 Score = 539 bits (1389), Expect = e-154, Method: Compositional matrix adjust. Identities = 264/264 (100%), Positives = 264/264 (100%) Query: 1 MMSDQENENEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKI 60 MMSDQENENEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKI Sbjct: 1 MMSDQENENEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKI 60 Query: 61 VLSQHVSFANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDFKEQQ 120 VLSQHVSFANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDFKEQQ Sbjct: 61 VLSQHVSFANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDFKEQQ 120 Query: 121 VTKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIF 180 VTKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIF Sbjct: 121 VTKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIF 180 Query: 181 GWFRWTGLKPGKEFPHGDSLASLFSEEIYPFCVKYYAEAQRDLEDEEGESGLSADGDSED 240 GWFRWTGLKPGKEFPHGDSLASLFSEEIYPFCVKYYAEAQRDLEDEEGESGLSADGDSED Sbjct: 181 GWFRWTGLKPGKEFPHGDSLASLFSEEIYPFCVKYYAEAQRDLEDEEGESGLSADGDSED 240 Query: 241 DDGSLGEVDLPLSDEEPSSKKRKV 264 DDGSLGEVDLPLSDEEPSSKKRKV Sbjct: 241 DDGSLGEVDLPLSDEEPSSKKRKV 264 >3Q35-B nrPDB Length = 232 Score = 479 bits (1232), Expect = e-136, Method: Compositional matrix adjust. Identities = 232/232 (100%), Positives = 232/232 (100%) Query: 1 MMSDQENENEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKI 60 MMSDQENENEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKI Sbjct: 1 MMSDQENENEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKI 60 Query: 61 VLSQHVSFANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDFKEQQ 120 VLSQHVSFANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDFKEQQ Sbjct: 61 VLSQHVSFANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDFKEQQ 120 Query: 121 VTKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIF 180 VTKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIF Sbjct: 121 VTKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIF 180 Query: 181 GWFRWTGLKPGKEFPHGDSLASLFSEEIYPFCVKYYAEAQRDLEDEEGESGL 232 GWFRWTGLKPGKEFPHGDSLASLFSEEIYPFCVKYYAEAQRDLEDEEGESGL Sbjct: 181 GWFRWTGLKPGKEFPHGDSLASLFSEEIYPFCVKYYAEAQRDLEDEEGESGL 232 >5GPL-A nrPDB Length = 274 Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 33/221 (14%) Query: 10 EHAKAFLGLAKCEEEVDAIEREVELYRLNKM-KPVYEKRDAYIDEIAEFWKIVL-SQHVS 67 E A+AF LA E+E E E+ L + N++ +P++E+R + I FW +VL + Sbjct: 2 EAAQAFENLANLEQEFGKAEIEI-LKKQNELFQPLFEQRRDILKTINNFWVVVLEAAGDE 60 Query: 68 FANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDFKEQQVTKVFQI 127 + YI D ++ ++ I VE E E D R S+TF + D V +V +I Sbjct: 61 ISQYITPEDSVLLEKLENIYVERFN-EKEPRDVR-ISLTFQPNEYLQDDNLTLVKEV-RI 117 Query: 128 KKGKDDQEDGI------LTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMK---T 178 K+ K ++G+ TS+PV I W GK +R+ K Sbjct: 118 KEEKAKDDEGLEKKITKYTSQPVDIHWKP-----------------GKSLFRKNKKLPPN 160 Query: 179 IFGWFRWTGLKPGKEFPHGDSLASLFSEEIYPFCVKYYAEA 219 F +F+WTG + +F G +L +E+++P VKY+ EA Sbjct: 161 FFDYFQWTGEEEDDDF-DGATLTIFLAEDLFPNAVKYFTEA 200 >5ZB5-A nrPDB Length = 250 Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 68/251 (27%), Positives = 110/251 (43%), Gaps = 46/251 (18%) Query: 24 EVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIVLSQHVS--FANYIRASDFKYID 81 +V+ ++ +VEL+ P+YEKR + +I +FW I + S + YI D ++ Sbjct: 36 DVELLKHQVELFN-----PLYEKRANVLRKIPKFWPIAIEAAPSDELSVYISPEDANVLE 90 Query: 82 TIDKIKVEWLALESEMYDTRDFSITFHFHGIE-GDFKEQQVTKVFQIKKGKD-------D 133 + ++V D RD I F F E + + K+F+ K + Sbjct: 91 HLIDLRVY-----RPNEDPRDIKIVFEFEANEYLESNSLYLEKLFRYSSQKAEASSSNIN 145 Query: 134 QEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIFGWFRWTGLKPGKE 193 +E L SE V IEW + N DL + + + F WF WTG K Sbjct: 146 KEPSQLISEKVNIEWKK-----NKDLTRQTKG---------TAPSFFTWFSWTG-KENDI 190 Query: 194 FPHGDSLASLFSEEIYPFCVKYYAEAQRDLEDEEGESGLSADGDSEDDDGSLGEVDLPLS 253 F + LA +E++YP VKY+ +A L++ E D ++E+ D +S Sbjct: 191 FEDEEELAIFIAEDLYPNAVKYFTDA---LQENEENEDEEIDLENENGDN--------IS 239 Query: 254 DEEPSSKKRKV 264 +EEPS K+ K+ Sbjct: 240 EEEPSKKRTKL 250 >5DAY-A nrPDB Length = 208 Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 50/204 (24%), Positives = 84/204 (41%), Gaps = 34/204 (16%) Query: 20 KCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIVLSQHVSFANYIRASD--- 76 K +EV +E++ + R KPVY+KR+ I I FW H + + + D Sbjct: 30 KASDEVLEVEQKYNVIR----KPVYDKRNEVIQSIPGFWMTAFLSHPALGDLLTEEDQKI 85 Query: 77 FKYIDTIDKIKVEWLALESEMYDTRD----FSITFHFHGIEGDFKEQQVTKVFQIKKGKD 132 FKY++++ E+ D +D +SITFHF F++ ++TK F Sbjct: 86 FKYLNSL------------EVEDAKDVKSGYSITFHFTS-NPFFEDAKLTKTFTF----- 127 Query: 133 DQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIFGWFRWTGLKPGK 192 E+G PI+W + N DK+ K ++ F WF K Sbjct: 128 -LEEGTTKITATPIKWKEGKGLPNGVNHDDKKG----NKRALPEESFFTWFTDAQHKEDA 182 Query: 193 EFPHGDSLASLFSEEIYPFCVKYY 216 D +A + E+++ + Y+ Sbjct: 183 GDEIHDEVADIIKEDLWSNPLTYF 206 >5X7V-A nrPDB Length = 193 Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 10/90 (11%) Query: 20 KCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIVLSQHVSFANYIRASDFKY 79 KC E I+++ + K KP++EKRD I +I FW L +H + ++ I D Sbjct: 18 KCAHEQMNIQKQYD----EKKKPLFEKRDEIIQKIPGFWANTLRKHPALSD-IVPEDIDI 72 Query: 80 IDTIDKIKVEWLALESEMYDTRDFSITFHF 109 ++ + K L L+ M + + ITF F Sbjct: 73 LNHLVK-----LDLKDNMDNNGSYKITFIF 97 >2E50-A nrPDB Length = 225 Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust. Identities = 48/228 (21%), Positives = 97/228 (42%), Gaps = 41/228 (17%) Query: 3 SDQENENEHAKAFLGLAKCEEEVDAIEREV--ELYRL----NKMK-PVYEKRDAYIDEIA 55 +D+ +E E +A + + + E+D + + E+ ++ NK++ P ++KR I +I Sbjct: 20 ADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIP 79 Query: 56 EFWKIVLSQHVSFANYIRASDFKYIDTIDKIKVEWLALESEMYDTRD-FSITFHFHGIEG 114 FW H + + D + + + +++V +E D + + I F+F E Sbjct: 80 NFWVTTFVNHPQVSALLGEEDEEAMHYLTRVEV------TEFEDIKSGYRIDFYFD--EN 131 Query: 115 DFKEQQV-TKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPE-----G 168 + E +V +K F + E G +S+ I+W D KRS + Sbjct: 132 PYFENKVLSKEFHM------NESGDPSSKSTEIKWKSGKDMT-------KRSSQTQNKAS 178 Query: 169 KKKYRQGMKTIFGWFRWTGLKPGKEFPHGDSLASLFSEEIYPFCVKYY 216 +K+ + ++ F WF D L + ++I+P ++YY Sbjct: 179 RKRQHEEPESFFTWF------TDHSDAGADELGEVIKDDIWPNPLQYY 220 >3FS3-A nrPDB Length = 359 Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust. Identities = 43/204 (21%), Positives = 81/204 (39%), Gaps = 32/204 (15%) Query: 42 PVYEKR-DAYIDE---------IAEFWKIVLSQHVSFANYIRASDFKYIDTIDKIKVEWL 91 P+Y+KR +A + + EFW L + + ++ I D + + ++ I+ +++ Sbjct: 89 PIYDKRREALVGNGEAKIGTPNLPEFWLRALRNNNTVSHVIEDHDEEILVYLNDIRCDYI 148 Query: 92 ALESEMYDTRDFSITFHFHGIEGDFKEQQVTKVFQIKKGKDDQEDGILTSEPVPIEWPQS 151 E F ++F+F F +TK + +K D E +L +E I+W + Sbjct: 149 KKNKE--KKEGFILSFYF-ATNPFFSNSVLTKTYHMKCVDCDNEPVLLHTEATVIDWYDN 205 Query: 152 YDSINPDLIK---DKRSPEGKKKYRQGMKTIFGWFRWTGLKPGKE--------------- 193 + + +++K +K S E K + + F F + P Sbjct: 206 KNILKKNVVKKQHNKNSREVKTVQQTVNRDSFFHFFTSHKVPNSNVIKQLSKHEVAQLEM 265 Query: 194 FPHGD-SLASLFSEEIYPFCVKYY 216 GD +A E I P+ V YY Sbjct: 266 IIEGDYEVALTIKERIIPYAVDYY 289 >3GYW-A nrPDB Length = 249 Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust. Identities = 27/138 (19%), Positives = 62/138 (44%), Gaps = 13/138 (9%) Query: 42 PVYEKR-DAYIDE---------IAEFWKIVLSQHVSFANYIRASDFKYIDTIDKIKVEWL 91 P+Y+KR +A + + EFW L + + ++ I D + + ++ I+ +++ Sbjct: 45 PIYDKRREALVGNGEAKIGTPNLPEFWLRALRNNNTVSHVIEDHDEEILVYLNDIRCDYI 104 Query: 92 ALESEMYDTRDFSITFHFHGIEGDFKEQQVTKVFQIKKGKDDQEDGILTSEPVPIEWPQS 151 E F ++F+F F +TK + +K D E +L +E I+W + Sbjct: 105 KKNKE--KKEGFILSFYF-ATNPFFSNSVLTKTYHMKCVDCDNEPVLLHTEATVIDWYDN 161 Query: 152 YDSINPDLIKDKRSPEGK 169 + + +++K + + + Sbjct: 162 KNILKKNVVKKQHNKNSR 179 >3OIS-A nrPDB Length = 291 Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 22/130 (16%) Query: 96 EMYDTRDFSITFHFHGIEGDFKEQQVTKVFQIKKGKDDQEDGILTSEPVP--IEWPQSYD 153 ++ D RDFS T I + +T FQ+ D G T+ + I++ + +D Sbjct: 38 DIADIRDFSYTPEKSVIAALPPKVDLTPPFQVY---DQGRIGSCTANALAAAIQFERIHD 94 Query: 154 SINPDLIKDK-------RSPEGKKKY------RQGMKTIFGWFRWTGLKPGKEFPHGDSL 200 +P+ I + R EG Y R G+K + G+ P KE+P+GD+ Sbjct: 95 KQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHK----LGVCPEKEWPYGDTP 150 Query: 201 ASLFSEEIYP 210 A +EE P Sbjct: 151 ADPRTEEFPP 160 >6FA9-A nrPDB Length = 655 Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust. Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Query: 23 EEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIVL 62 EE + +R ++ R K PVY RDA++D + E+ ++L Sbjct: 15 EEAERAQRTIQEVR--KSLPVYAYRDAFLDAVKEYQVLIL 52 >2G18-A nrPDB Length = 253 Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust. Identities = 16/71 (22%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Query: 33 ELYRLNKMKPVYEKRDAYIDEIAEFWKIVLSQHVSFANYIRASDFKYIDTIDKIKVEWLA 92 E L + + E++ I ++A+ + V QH+ + Y ++ Y++ +++ E L Sbjct: 7 EFISLTSIPSLREQQHPLIRQLADCIEEVWHQHLDLSPYHLPAELGYVE--GRLEGEKLT 64 Query: 93 LESEMYDTRDF 103 +E+ Y T F Sbjct: 65 IENRCYQTPQF 75 >4RSI-A nrPDB Length = 397 Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust. Identities = 13/30 (43%), Positives = 19/30 (63%) Query: 6 ENENEHAKAFLGLAKCEEEVDAIEREVELY 35 E ENE + L KC+EEV IE++++ Y Sbjct: 361 ECENEIKTKQMSLKKCQEEVSTIEKDMKEY 390 >4WKT-C nrPDB Length = 548 Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust. Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 2/78 (2%) Query: 151 SYDSINPDLIKDKRSPEGKKKYRQGMKTIFGWFRWTGLKPGKEFPHGDSLASLFSEEIYP 210 S D + PDL++ R +G+K + + W R L G F + F+E Sbjct: 327 SADQVLPDLLRLCRDNQGEKSLARACAALAQWDRGANLDSGSGFVYFQRFMQRFAE--LD 384 Query: 211 FCVKYYAEAQRDLEDEEG 228 K +AQR L+ +G Sbjct: 385 GAWKEPFDAQRPLDTPQG 402 >5UBK-A nrPDB Length = 709 Score = 26.9 bits (58), Expect = 9.6, Method: Compositional matrix adjust. Identities = 15/56 (26%), Positives = 24/56 (42%) Query: 151 SYDSINPDLIKDKRSPEGKKKYRQGMKTIFGWFRWTGLKPGKEFPHGDSLASLFSE 206 S D + PDL++ R +G+K + + W R L G F + F+E Sbjct: 327 SADQVLPDLLRLCRDNQGEKSLARACAALAQWDRGANLDSGSGFVYFQRFMQRFAE 382 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3Q68-A nrPDB 356 6e-99 3Q35-B nrPDB 318 2e-87 5GPL-A nrPDB 177 3e-45 5ZB5-A nrPDB 177 6e-45 5DAY-A nrPDB 172 1e-43 Sequences not found previously or not previously below threshold: 2E50-A nrPDB 85 3e-17 5X7V-A nrPDB 79 2e-15 3GYW-A nrPDB 63 9e-11 3FS3-A nrPDB 61 3e-10 2Z2R-A nrPDB 59 2e-09 2AYU-A nrPDB 58 6e-09 3BDK-A nrPDB 33 0.14 6HF4-A nrPDB 31 0.49 3TTS-A nrPDB 30 1.4 >3Q68-A nrPDB Length = 264 Score = 356 bits (913), Expect = 6e-99, Method: Composition-based stats. Identities = 264/264 (100%), Positives = 264/264 (100%) Query: 1 MMSDQENENEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKI 60 MMSDQENENEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKI Sbjct: 1 MMSDQENENEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKI 60 Query: 61 VLSQHVSFANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDFKEQQ 120 VLSQHVSFANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDFKEQQ Sbjct: 61 VLSQHVSFANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDFKEQQ 120 Query: 121 VTKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIF 180 VTKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIF Sbjct: 121 VTKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIF 180 Query: 181 GWFRWTGLKPGKEFPHGDSLASLFSEEIYPFCVKYYAEAQRDLEDEEGESGLSADGDSED 240 GWFRWTGLKPGKEFPHGDSLASLFSEEIYPFCVKYYAEAQRDLEDEEGESGLSADGDSED Sbjct: 181 GWFRWTGLKPGKEFPHGDSLASLFSEEIYPFCVKYYAEAQRDLEDEEGESGLSADGDSED 240 Query: 241 DDGSLGEVDLPLSDEEPSSKKRKV 264 DDGSLGEVDLPLSDEEPSSKKRKV Sbjct: 241 DDGSLGEVDLPLSDEEPSSKKRKV 264 >3Q35-B nrPDB Length = 232 Score = 318 bits (813), Expect = 2e-87, Method: Composition-based stats. Identities = 232/232 (100%), Positives = 232/232 (100%) Query: 1 MMSDQENENEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKI 60 MMSDQENENEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKI Sbjct: 1 MMSDQENENEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKI 60 Query: 61 VLSQHVSFANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDFKEQQ 120 VLSQHVSFANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDFKEQQ Sbjct: 61 VLSQHVSFANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDFKEQQ 120 Query: 121 VTKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIF 180 VTKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIF Sbjct: 121 VTKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIF 180 Query: 181 GWFRWTGLKPGKEFPHGDSLASLFSEEIYPFCVKYYAEAQRDLEDEEGESGL 232 GWFRWTGLKPGKEFPHGDSLASLFSEEIYPFCVKYYAEAQRDLEDEEGESGL Sbjct: 181 GWFRWTGLKPGKEFPHGDSLASLFSEEIYPFCVKYYAEAQRDLEDEEGESGL 232 >5GPL-A nrPDB Length = 274 Score = 177 bits (449), Expect = 3e-45, Method: Composition-based stats. Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 25/220 (11%) Query: 10 EHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIVLS-QHVSF 68 E A+AF LA E+E E E+ + +P++E+R + I FW +VL Sbjct: 2 EAAQAFENLANLEQEFGKAEIEILKKQNELFQPLFEQRRDILKTINNFWVVVLEAAGDEI 61 Query: 69 ANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDFKEQQVTKVFQIK 128 + YI D ++ ++ I VE E E D R S+TF + D V +V +IK Sbjct: 62 SQYITPEDSVLLEKLENIYVERFN-EKEPRDVR-ISLTFQPNEYLQDDNLTLVKEV-RIK 118 Query: 129 KGKDDQEDGI------LTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIFGW 182 + K ++G+ TS+PV I W +K ++ F + Sbjct: 119 EEKAKDDEGLEKKITKYTSQPVDIHWKPGKSLF--------------RKNKKLPPNFFDY 164 Query: 183 FRWTGLKPGKEFPHGDSLASLFSEEIYPFCVKYYAEAQRD 222 F+WTG + +F G +L +E+++P VKY+ EA + Sbjct: 165 FQWTGEEEDDDF-DGATLTIFLAEDLFPNAVKYFTEAMTE 203 >5ZB5-A nrPDB Length = 250 Score = 177 bits (447), Expect = 6e-45, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 41/261 (15%) Query: 14 AFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIVLSQHVS--FANY 71 + +A E E + + E+ +++ P+YEKR + +I +FW I + S + Y Sbjct: 21 SLDEVADIELEFEKADVELLKHQVELFNPLYEKRANVLRKIPKFWPIAIEAAPSDELSVY 80 Query: 72 IRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIE-GDFKEQQVTKVFQIKKG 130 I D ++ + ++V D RD I F F E + + K+F+ Sbjct: 81 ISPEDANVLEHLIDLRVY-----RPNEDPRDIKIVFEFEANEYLESNSLYLEKLFRYSSQ 135 Query: 131 KD-------DQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIFGWF 183 K ++E L SE V IEW + N DL + + + F WF Sbjct: 136 KAEASSSNINKEPSQLISEKVNIEWKK-----NKDLTRQTKG---------TAPSFFTWF 181 Query: 184 RWTGLKPGKEFPHGDSLASLFSEEIYPFCVKYYAEAQRDLEDEEGESGLSADGDSEDDDG 243 WTG K F + LA +E++YP VKY+ +A L++ E D ++E+ D Sbjct: 182 SWTG-KENDIFEDEEELAIFIAEDLYPNAVKYFTDA---LQENEENEDEEIDLENENGDN 237 Query: 244 SLGEVDLPLSDEEPSSKKRKV 264 +S+EEPS K+ K+ Sbjct: 238 --------ISEEEPSKKRTKL 250 >5DAY-A nrPDB Length = 208 Score = 172 bits (436), Expect = 1e-43, Method: Composition-based stats. Identities = 48/201 (23%), Positives = 81/201 (40%), Gaps = 28/201 (13%) Query: 20 KCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIVLSQHVSFANYIRASDFKY 79 K +EV +E++ + R KPVY+KR+ I I FW H + + + D K Sbjct: 30 KASDEVLEVEQKYNVIR----KPVYDKRNEVIQSIPGFWMTAFLSHPALGDLLTEEDQKI 85 Query: 80 IDTIDKIKVEWLALESEMYDTRD----FSITFHFHGIEGDFKEQQVTKVFQIKKGKDDQE 135 ++ + E+ D +D +SITFHF F++ ++TK F E Sbjct: 86 FKYLNSL---------EVEDAKDVKSGYSITFHFTS-NPFFEDAKLTKTFTF------LE 129 Query: 136 DGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIFGWFRWTGLKPGKEFP 195 +G PI+W + N DK+ K ++ F WF K Sbjct: 130 EGTTKITATPIKWKEGKGLPNGVNHDDKKG----NKRALPEESFFTWFTDAQHKEDAGDE 185 Query: 196 HGDSLASLFSEEIYPFCVKYY 216 D +A + E+++ + Y+ Sbjct: 186 IHDEVADIIKEDLWSNPLTYF 206 >2E50-A nrPDB Length = 225 Score = 85.0 bits (208), Expect = 3e-17, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 89/222 (40%), Gaps = 29/222 (13%) Query: 3 SDQENENEHAKAFLGLAKCEEEVDAIERE-------VELYRLNKMKPVYEKRDAYIDEIA 55 +D+ +E E +A + + + E+D + + VE +P ++KR I +I Sbjct: 20 ADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIP 79 Query: 56 EFWKIVLSQHVSFANYIRASDFKYIDTIDKIKVEWLALESEMYDTRD-FSITFHFHGIEG 114 FW H + + D + + + +++V +E D + + I F+F Sbjct: 80 NFWVTTFVNHPQVSALLGEEDEEAMHYLTRVEV------TEFEDIKSGYRIDFYFDE-NP 132 Query: 115 DFKEQQVTKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQ 174 F+ + ++K F + E G +S+ I+W D ++ +K+ + Sbjct: 133 YFENKVLSKEFHMN------ESGDPSSKSTEIKWKSGKDMTKR--SSQTQNKASRKRQHE 184 Query: 175 GMKTIFGWFRWTGLKPGKEFPHGDSLASLFSEEIYPFCVKYY 216 ++ F WF D L + ++I+P ++YY Sbjct: 185 EPESFFTWFT------DHSDAGADELGEVIKDDIWPNPLQYY 220 >5X7V-A nrPDB Length = 193 Score = 79.2 bits (193), Expect = 2e-15, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 72/198 (36%), Gaps = 28/198 (14%) Query: 20 KCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIVLSQHVSFANYIRASDFKY 79 KC E I+++ + K KP++EKRD I +I FW L +H + ++ I D Sbjct: 18 KCAHEQMNIQKQYD----EKKKPLFEKRDEIIQKIPGFWANTLRKHPALSD-IVPEDIDI 72 Query: 80 IDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDF-KEQQVTKVFQIKKGKDDQEDGI 138 ++ + K+ L+ M + + ITF F +F + + K ++ Sbjct: 73 LNHLVKL-----DLKDNMDNNGSYKITFIFGEKAKEFMEPLTLVKHVTFDNNQEK----- 122 Query: 139 LTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTIFGWFRWTGLKPGKEFPHGD 198 E I+W + + I +IF WF E Sbjct: 123 -VVECTRIKWKEGKNPIAAVTHNRSDLDN-----EIPKWSIFEWFT------TDELQDKP 170 Query: 199 SLASLFSEEIYPFCVKYY 216 + L EI+ + YY Sbjct: 171 DVGELIRREIWHNPLSYY 188 >3GYW-A nrPDB Length = 249 Score = 63.4 bits (152), Expect = 9e-11, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 86/227 (37%), Gaps = 36/227 (15%) Query: 19 AKCEEEVDAIEREVELYRLNKMKPVYEKRDAYI----------DEIAEFWKIVLSQHVSF 68 +K E E+ + ++ + P+Y+KR + + EFW L + + Sbjct: 26 SKFEYELFLLRQKYH----DLYGPIYDKRREALVGNGEAKIGTPNLPEFWLRALRNNNTV 81 Query: 69 ANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDFKEQQVTKVFQIK 128 ++ I D + + ++ I+ +++ E + F ++F+F F +TK + +K Sbjct: 82 SHVIEDHDEEILVYLNDIRCDYIKKNKEKKE--GFILSFYF-ATNPFFSNSVLTKTYHMK 138 Query: 129 KGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKK----KYRQGMKTIFGWFR 184 D E +L +E I+W + + + +++K + + ++ + + F +F Sbjct: 139 CVDCDNEPVLLHTEATVIDWYDNKNILKKNVVKKQHNKNSREVKTVQQTVNRDSFFHFFT 198 Query: 185 WTGLKPGK---------------EFPHGDSLASLFSEEIYPFCVKYY 216 + +A E I P+ V YY Sbjct: 199 SHKVPNSNVIKQLSKHEVAQLEMIIEGDYEVALTIKERIIPYAVDYY 245 >3FS3-A nrPDB Length = 359 Score = 61.5 bits (147), Expect = 3e-10, Method: Composition-based stats. Identities = 45/249 (18%), Positives = 93/249 (37%), Gaps = 37/249 (14%) Query: 2 MSDQENENEHAKAFLGLAKCEEEVDAIEREVELYRLNK-----MKPVYEKRDAYI----- 51 M+D E + L L + E + E EL+ L + P+Y+KR + Sbjct: 44 MTDLTEEQKETLKKLKLYQKEYYDYESKFEYELFLLRQKYHDLYGPIYDKRREALVGNGE 103 Query: 52 -----DEIAEFWKIVLSQHVSFANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSIT 106 + EFW L + + ++ I D + + ++ I+ +++ E + F ++ Sbjct: 104 AKIGTPNLPEFWLRALRNNNTVSHVIEDHDEEILVYLNDIRCDYIKKNKEKKE--GFILS 161 Query: 107 FHFHGIEGDFKEQQVTKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSP 166 F+F F +TK + +K D E +L +E I+W + + + +++K + + Sbjct: 162 FYF-ATNPFFSNSVLTKTYHMKCVDCDNEPVLLHTEATVIDWYDNKNILKKNVVKKQHNK 220 Query: 167 EGKK----KYRQGMKTIFGWFRWTGLKPGK---------------EFPHGDSLASLFSEE 207 ++ + + F +F + +A E Sbjct: 221 NSREVKTVQQTVNRDSFFHFFTSHKVPNSNVIKQLSKHEVAQLEMIIEGDYEVALTIKER 280 Query: 208 IYPFCVKYY 216 I P+ V YY Sbjct: 281 IIPYAVDYY 289 >2Z2R-A nrPDB Length = 292 Score = 58.8 bits (140), Expect = 2e-09, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 60/168 (35%), Gaps = 12/168 (7%) Query: 23 EEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIVLSQHVSFANYIRASDFKYIDT 82 +E+ E EL + K + + + I FW L + I D + ++ Sbjct: 81 QEIVESLNETELLVDEEEKAQNDSEEEQVKGIPSFWLTALENLPIVCDTITDRDAEVLEY 140 Query: 83 IDKIKVEWLALESEMYDTRDFSITFHFHGI-EGDFKEQQVTKVFQIKKGKDDQEDGILT- 140 + I +E+L F + F F F + K + +K D I Sbjct: 141 LQDIGLEYLTDGRP-----GFKLLFRFDSSANPFFTNDILCKTYFYQKELGYSGDFIYDH 195 Query: 141 SEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYR-----QGMKTIFGWF 183 +E I W + ++ DL K+ + K+ R +++ F +F Sbjct: 196 AEGCEISWKDNAHNVTVDLEMRKQRNKTTKQVRTIEKITPIESFFNFF 243 >2AYU-A nrPDB Length = 417 Score = 57.6 bits (137), Expect = 6e-09, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 60/168 (35%), Gaps = 12/168 (7%) Query: 23 EEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIVLSQHVSFANYIRASDFKYIDT 82 +E+ E EL + K + + + I FW L + I D + ++ Sbjct: 154 QEIVESLNETELLVDEEEKAQNDSEEEQVKGIPSFWLTALENLPIVCDTITDRDAEVLEY 213 Query: 83 IDKIKVEWLALESEMYDTRDFSITFHFHGI-EGDFKEQQVTKVFQIKKGKDDQEDGILT- 140 + I +E+L F + F F F + K + +K D I Sbjct: 214 LQDIGLEYLTDGRP-----GFKLLFRFDSSANPFFTNDILCKTYFYQKELGYSGDFIYDH 268 Query: 141 SEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYR-----QGMKTIFGWF 183 +E I W + ++ DL K+ + K+ R +++ F +F Sbjct: 269 AEGCEISWKDNAHNVTVDLEMRKQRNKTTKQVRTIEKITPIESFFNFF 316 >3BDK-A nrPDB Length = 386 Score = 33.0 bits (73), Expect = 0.14, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 29/92 (31%), Gaps = 4/92 (4%) Query: 121 VTKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMK--- 177 + + ++KK ++ I E +P+ N D + + + G+ Sbjct: 63 LENILELKKMVEEAGLEITVIESIPVHEDIKQGKPNRDALIENYKTSIRNVGAAGIPVVC 122 Query: 178 -TIFGWFRWTGLKPGKEFPHGDSLASLFSEEI 208 F WT P G + + ++ Sbjct: 123 YNFMPVFDWTRSDLHHPLPDGSTSLAFLKSDL 154 >6HF4-A nrPDB Length = 368 Score = 31.0 bits (68), Expect = 0.49, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 35/91 (38%), Gaps = 13/91 (14%) Query: 131 KDDQEDG-----ILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKKYRQGMKTI------ 179 K D E+ +L + +P+ W +++ K + K+ ++ +T Sbjct: 174 KADLEELAGYLLLLKQKNIPVIWRPLHEAAGKWFWWGKDAASYKRLWKLVYETFKQKGLN 233 Query: 180 -FGWFRWTGLKPGKEFPHGDSLASLFSEEIY 209 W WT +++ GD+ + ++Y Sbjct: 234 NLIWV-WTSETNDRDWYPGDAYVDIIGRDVY 263 >3TTS-A nrPDB Length = 675 Score = 29.5 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 8/101 (7%) Query: 9 NEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIVLSQHVSF 68 +EH + F A+ +E+ + + R E + A + + W + LS S Sbjct: 367 HEHTRVFRECAELGKELQQLGDTILDARS-------EAKVAVMYDWENRWALELSSGPSI 419 Query: 69 ANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHF 109 A KY D + K ++ + E D + + Sbjct: 420 ALNYVNEVHKYYDALYKQNIQTDMISVE-EDLSKYKVVIAP 459 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.299 0.113 0.274 Lambda K H 0.267 0.0347 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,492,605 Number of Sequences: 36641 Number of extensions: 319472 Number of successful extensions: 931 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 831 Number of HSP's gapped (non-prelim): 92 length of query: 264 length of database: 10,336,785 effective HSP length: 95 effective length of query: 169 effective length of database: 6,855,890 effective search space: 1158645410 effective search space used: 1158645410 T: 11 A: 40 X1: 16 ( 6.9 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.3 bits) S2: 57 (26.8 bits)