BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P53615 (221 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3EYX-A nrPDB 436 e-123 6GWU-A nrPDB 139 1e-33 5JJ8-A nrPDB 115 1e-26 4O1J-A nrPDB 113 5e-26 1DDZ-A nrPDB 106 6e-24 4O1K-A nrPDB 104 4e-23 5CXK-A nrPDB 98 2e-21 3QY1-A nrPDB 97 4e-21 3E2W-A nrPDB 97 5e-21 4ZNZ-A nrPDB 95 2e-20 2W3N-A nrPDB 95 3e-20 3UCK-A nrPDB 92 2e-19 5SWC-A nrPDB 77 5e-15 1EKJ-A nrPDB 67 8e-12 2A5V-A nrPDB 49 2e-06 1G5C-A nrPDB 45 2e-05 1YLK-A nrPDB 34 0.053 3W0L-B nrPDB 33 0.088 3TEO-A nrPDB 33 0.12 5ZTP-A nrPDB 30 1.0 5ZLM-A nrPDB 28 3.0 4R9X-A nrPDB 28 3.6 3I77-A nrPDB 27 4.8 1YIX-A nrPDB 27 7.6 >3EYX-A nrPDB Length = 216 Score = 436 bits (1122), Expect = e-123, Method: Compositional matrix adjust. Identities = 208/209 (99%), Positives = 208/209 (99%) Query: 13 SHNSNLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENCLGVLPG 72 HNSNLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENCLGVLPG Sbjct: 8 GHNSNLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENCLGVLPG 67 Query: 73 EVFTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKV 132 EVFTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKV Sbjct: 68 EVFTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKV 127 Query: 133 NCSHLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQN 192 NCSHLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQN Sbjct: 128 NCSHLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQN 187 Query: 193 GELQVYGLLYNVEDGLLQTVSTYTKVTPK 221 GELQVYGLLYNVEDGLLQTVSTYTKVTPK Sbjct: 188 GELQVYGLLYNVEDGLLQTVSTYTKVTPK 216 >6GWU-A nrPDB Length = 208 Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 77/208 (37%), Positives = 117/208 (56%), Gaps = 15/208 (7%) Query: 10 FTLSHNSNLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENCLGV 69 FTLS S LQD L N + + + D N +GQSPHTL+IGCSDSR + CL Sbjct: 4 FTLSSESTLQDFLNNNKFFVDSIKHNHGNQIFDLNGQGQSPHTLWIGCSDSRAGDQCLAT 63 Query: 70 LPGEVFTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREAL 129 LPGE+F +N+ANI ++ D++ + ++FAI LKV K+I+CGHTDCGGI L+ ++ Sbjct: 64 LPGEIFVHRNIANIVNANDISSQGVIQFAIDVLKVKKIIVCGHTDCGGIWASLSKKK--- 120 Query: 130 PKVNCSHLYKYLD-DIDTMYHEESQNLIHLKTQRE----KSHYLSHCNVKRQFNRIIENP 184 + LD ++ + H + NL L+ + K+ L+ NV + +P Sbjct: 121 -------IGGVLDLWLNPVRHIRAANLKLLEEYNQDPKLKAKKLAELNVISSVTALKRHP 173 Query: 185 TVQTAVQNGELQVYGLLYNVEDGLLQTV 212 + A++ E++V+G+LY+V G L V Sbjct: 174 SASVALKKNEIEVWGMLYDVATGYLSQV 201 >5JJ8-A nrPDB Length = 215 Score = 115 bits (289), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 112/212 (52%), Gaps = 14/212 (6%) Query: 16 SNLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNEN-CLGVLPGEV 74 S+LQ + N +WA + P F A+ Q+P L+IGCSD+R N +G+LPG++ Sbjct: 2 SDLQQLFENNVRWAEAIKQEDPDFFAKL-ARQQTPEYLWIGCSDARVPANEIVGMLPGDL 60 Query: 75 FTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNC 134 F +NVAN+ DL + ++FA+ LKV +++ GH CGG++ L N + L Sbjct: 61 FVHRNVANVVLHTDLNCLSVIQFAVDVLKVKHILVTGHYGCGGVRASLHNDQLGL----- 115 Query: 135 SHLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGE 194 + +L I + +E ++L L T+ E+ L NV +Q + VQ A G+ Sbjct: 116 --IDGWLRSIRDLAYEYREHLEQLPTEEERVDRLCELNVIQQVANVSHTSIVQNAWHRGQ 173 Query: 195 -LQVYGLLYNVEDGLLQ----TVSTYTKVTPK 221 L V+G +Y ++DGL + TVS ++ P+ Sbjct: 174 SLSVHGCIYGIKDGLWKNLNVTVSGLDQLPPQ 205 >4O1J-A nrPDB Length = 255 Score = 113 bits (283), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 61/196 (31%), Positives = 107/196 (54%), Gaps = 8/196 (4%) Query: 22 LAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNEN-CLGVLPGEVFTWKNV 80 L++N WA + P FP A GQ+P L+IGCSDSR E LG+ PG+VF +N+ Sbjct: 22 LSSNNAWAGYKAHQNPHFFPKL-AGGQAPEILWIGCSDSRCPETTILGMQPGDVFVHRNI 80 Query: 81 ANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSHLYKY 140 ANI D+ A +E+A+ LKV +++CGH+ CGG L++ R L + Sbjct: 81 ANIVSPTDINTTAVIEYAVAHLKVKHIVLCGHSACGGAAGALSDGRIG------GVLDTW 134 Query: 141 LDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGELQVYGL 200 L + T+ + ++ L + ++E+ ++ NV+ ++ NPT++ A+ L+V+G+ Sbjct: 135 LLPLKTVRYNHAEELDAITDEKERVIRIAQLNVEAGIKVLMNNPTIREAIAERGLEVHGV 194 Query: 201 LYNVEDGLLQTVSTYT 216 +++ G ++ + T Sbjct: 195 FFDIGCGRIKELGCGT 210 >1DDZ-A nrPDB Length = 496 Score = 106 bits (265), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 69/197 (35%), Positives = 101/197 (51%), Gaps = 10/197 (5%) Query: 20 DILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENCLGVLP-GEVFTWK 78 +I A N W +M P F + A GQSP L+IGC+DSR N L LP GEVF + Sbjct: 38 NIFANNEAWRQEMLKQDPEFF-NRLANGQSPEYLWIGCADSRVPANQLLDLPAGEVFVHR 96 Query: 79 NVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSHLY 138 N+AN C D++ + L++A+ LKV +++CGH CGG K L + R L + Sbjct: 97 NIANQCIHSDISFLSVLQYAVQYLKVKHILVCGHYGCGGAKAALGDSRLGL----IDNWL 152 Query: 139 KYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNG-ELQV 197 +++ D+ M ++ L K E+ + L NV Q + + VQ A G EL V Sbjct: 153 RHIRDVRRM---NAKYLDKCKDGDEELNRLIELNVLEQVHNVCATSIVQDAWDAGQELTV 209 Query: 198 YGLLYNVEDGLLQTVST 214 G++Y V DG L+ + Sbjct: 210 QGVVYGVGDGKLRDLGV 226 Score = 100 bits (249), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 10/199 (5%) Query: 21 ILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENCLGVLP-GEVFTWKN 79 + N W +M P F + A Q+P L+IGC+DSR N + LP GEVF +N Sbjct: 293 VFVNNENWRQKMLKQDPQFFSNL-AHTQTPEILWIGCADSRVPANQIINLPAGEVFVHRN 351 Query: 80 VANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSHLYK 139 +AN C D++ + L++A+ LKV +V++CGH CGG L + R L H+ Sbjct: 352 IANQCIHSDMSFLSVLQYAVQYLKVKRVVVCGHYACGGCAAALGDSRLGLIDNWLRHIR- 410 Query: 140 YLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNG-ELQVY 198 D H +++ L + ++ + L NV Q + + VQ A G EL+V Sbjct: 411 -----DVRRHNQAE-LSRITDPKDSLNRLIEINVLEQMHNVCATSIVQDAWDAGQELEVQ 464 Query: 199 GLLYNVEDGLLQTVSTYTK 217 G++Y V DG L+ + K Sbjct: 465 GVVYGVGDGKLRDMGVVAK 483 >4O1K-A nrPDB Length = 233 Score = 104 bits (259), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 10/196 (5%) Query: 21 ILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRY-NENCLGVLPGEVFTWKN 79 + N WA++ P F A GQ+P L+IGCSDSR E G+ PG+ F +N Sbjct: 21 VFENNKSWATEQVAKDPDFFKKL-AAGQNPEYLWIGCSDSRIPAEQITGLQPGDAFVHRN 79 Query: 80 VANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSHLYK 139 +AN+ + DL + + +E+A+ LKV +++CGH CGG+K +T PK + + Sbjct: 80 IANLVCNTDLNVMSVIEYAVKHLKVKHIVVCGHYGCGGVKAAMT------PK-DLGLMNP 132 Query: 140 YLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTA-VQNGELQVY 198 +L +I +Y + L + + + L NV Q +++ +Q + +NG ++ Sbjct: 133 WLRNIRDVYRLHEKELDAIADEEARYERLVELNVYEQCRNVVKTAALQQSYAENGFPVIH 192 Query: 199 GLLYNVEDGLLQTVST 214 G ++N DGLL+ ++ Sbjct: 193 GWVFNFRDGLLKDLNV 208 >5CXK-A nrPDB Length = 222 Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 11/199 (5%) Query: 18 LQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRY-NENCLGVLPGEVFT 76 ++ + N+KW++ + P F AKGQ+P L+IGC+DSR E G+ GE+F Sbjct: 4 IKQLFENNSKWSASIKAETPEYFAKL-AKGQNPDFLWIGCADSRVPAERLTGLYSGELFV 62 Query: 77 WKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSH 136 +NVAN DL + +++A+ L+V +I+CGH CGG+ + N + L Sbjct: 63 HRNVANQVIHTDLNCLSVVQYAVDVLQVKHIIVCGHYGCGGVTAAIDNPQLGL------- 115 Query: 137 LYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGE-L 195 + +L I Y + + L + + ++S L+ NV Q + + +Q A + G+ + Sbjct: 116 INNWLLHIRDYYLKHREYLDKMPAE-DRSDKLAEINVAEQVYNLANSTVLQNAWERGQAV 174 Query: 196 QVYGLLYNVEDGLLQTVST 214 +V+G +Y +EDG L+ + Sbjct: 175 EVHGFVYGIEDGRLEYLGV 193 >3QY1-A nrPDB Length = 223 Score = 97.4 bits (241), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 106/200 (53%), Gaps = 11/200 (5%) Query: 17 NLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRY-NENCLGVLPGEVF 75 ++ +++ NA W+ + P F + A+ Q P L+IGCSDSR E G+ PGE+F Sbjct: 6 DIDTLISNNALWSKMLVEEDPGFF-EKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELF 64 Query: 76 TWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCS 135 +NVAN+ DL + +++A+ L+V +IICGH+ CGGIK + N L Sbjct: 65 VHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHSGCGGIKAAVENPELGL------ 118 Query: 136 HLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGE- 194 + +L I ++ + S +L+ + ++ L NV Q + + +Q+A + G+ Sbjct: 119 -INNWLLHIRDIWLKHS-SLLGKMPEEQRLDALYELNVMEQVYNLGHSTIMQSAWKRGQN 176 Query: 195 LQVYGLLYNVEDGLLQTVST 214 + ++G Y++ DGLL+ + Sbjct: 177 VTIHGWAYSINDGLLRDLDV 196 >3E2W-A nrPDB Length = 229 Score = 97.1 bits (240), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 11/194 (5%) Query: 18 LQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRY-NENCLGVLPGEVFT 76 ++ + A N WA +M T F + A Q+PH L+IGCSDSR E + PGE+F Sbjct: 4 IKQLFANNYSWAQRMKEENSTYFKEL-ADHQTPHYLWIGCSDSRVPAEKLTNLEPGELFV 62 Query: 77 WKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSH 136 +NVAN D + +++A+ LK+ +IICGHT+CGGI + ++ L Sbjct: 63 HRNVANQVIHTDFNCLSVVQYAVDVLKIEHIIICGHTNCGGIHAAMADKDLGL------- 115 Query: 137 LYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGE-L 195 + +L I ++ + L L ++ ++ L+ NV Q + V++A + G+ L Sbjct: 116 INNWLLHIRDIWFKHGHLLGKLSPEK-RADMLTKINVAEQVYNLGRTSIVKSAWERGQKL 174 Query: 196 QVYGLLYNVEDGLL 209 ++G +++V DG L Sbjct: 175 SLHGWVFDVNDGFL 188 >4ZNZ-A nrPDB Length = 220 Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 11/200 (5%) Query: 17 NLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRY-NENCLGVLPGEVF 75 ++ +++ NA W+ + P F + A+ Q P L+IGCSDSR E G+ PGE+F Sbjct: 3 DIDTLISNNALWSKMLVEEDPGFF-EKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELF 61 Query: 76 TWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCS 135 +NVAN+ DL + +++A+ L+V +IICGH CGG++ + N L Sbjct: 62 VHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPELGL------ 115 Query: 136 HLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGE- 194 + +L I ++ + S L + +R + L NV Q + + +Q+A + G+ Sbjct: 116 -INNWLLHIRDIWFKHSSLLGEMPQER-RLDTLCELNVMEQVYNLGHSTIMQSAWKRGQK 173 Query: 195 LQVYGLLYNVEDGLLQTVST 214 + ++G Y + DGLL+ + Sbjct: 174 VTIHGWAYGIHDGLLRDLDV 193 >2W3N-A nrPDB Length = 239 Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 22/200 (11%) Query: 18 LQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNE-NCLGVLPGEVFT 76 ++++L N WA ++ + +P + KGQ+P+ L+IGC+DSR E + PG+VF Sbjct: 30 IREVLEGNRYWARKVTSEEPEFMAEQ-VKGQAPNFLWIGCADSRVPEVTIMARKPGDVFV 88 Query: 77 WKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALP---KVN 133 +NVAN ED + +A L +AI+ + V V++ GHT CGG C+ + LP Sbjct: 89 QRNVANQFKPEDDSSQALLNYAIMNVGVTHVMVVGHTGCGG---CIAAFDQPLPTEENPG 145 Query: 134 CSHLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTA---V 190 + L +YL+ I + H + + L NVK ++ +PT+Q A Sbjct: 146 GTPLVRYLEPIIRLKHSLPEG--------SDVNDLIKENVKMAVKNVVNSPTIQGAWEQA 197 Query: 191 QNGELQ---VYGLLYNVEDG 207 + GE + V+G LY++ G Sbjct: 198 RKGEFREVFVHGWLYDLSTG 217 >3UCK-A nrPDB Length = 227 Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 9/197 (4%) Query: 16 SNLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENCL-GVLPGEV 74 ++L +L AN KWA + T F A Q+P L+IGC+DSR + L + PGEV Sbjct: 7 ADLSPLLEANRKWADECAAKDSTYF-SKVAGSQAPEYLYIGCADSRVSPAQLFNMAPGEV 65 Query: 75 FTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNC 134 F +NV N+ ++DL + LE+ + LK+ +++CGH +CG K L + N Sbjct: 66 FVQRNVGNLVSNKDLNCMSCLEYTVDHLKIKHILVCGHYNCGACKAGLVWHPKTAGVTNL 125 Query: 135 SHLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGE 194 ++ D+ + + + L H + + + NV+ Q + +P VQ A G+ Sbjct: 126 -----WISDVREVRDKNAAKL-HGLSADDAWDKMVELNVEAQVFNVCASPIVQAAWARGQ 179 Query: 195 -LQVYGLLYNVEDGLLQ 210 L V+G++Y GL++ Sbjct: 180 PLSVHGIVYTPGTGLVK 196 >5SWC-A nrPDB Length = 239 Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 29/207 (14%) Query: 15 NSNLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENCLGVLP-GE 73 S++Q ++ K+ + LF + + GQ P LFI CSDSR + N + G+ Sbjct: 17 GSHMQRLIEGLQKFREGYFSSHRDLF-EQLSHGQHPRILFICCSDSRVDPNLITQSEVGD 75 Query: 74 VFTWKNVANIC---HSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLT--NQREA 128 +F +N NI + + A +E+A++ L++N++I+CGH+ CG +K L + +E Sbjct: 76 LFVIRNAGNIIPPYGAANGGEGAAMEYALVALEINQIIVCGHSHCGAMKGLLKLNSLQEK 135 Query: 129 LPKVNCSHLYKYLDD--------IDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRI 180 LP V Y +L +D H E ++LI + N+ Q + Sbjct: 136 LPLV-----YDWLKHTEATRRLVLDNYSHLEGEDLIEVAVAE---------NILTQLKNL 181 Query: 181 IENPTVQTAVQNGELQVYGLLYNVEDG 207 P + + + G+L ++G +Y +E+G Sbjct: 182 QTYPAIHSRLHRGDLSLHGWIYRIEEG 208 >1EKJ-A nrPDB Length = 221 Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 5/84 (5%) Query: 45 AKGQSPHTLFIGCSDSRY-NENCLGVLPGEVFTWKNVANICHSED----LTLKATLEFAI 99 AKGQSP + CSDSR + L PGE F +NVAN+ D A +E+A+ Sbjct: 40 AKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAV 99 Query: 100 ICLKVNKVIICGHTDCGGIKTCLT 123 + LKV+ +++ GH+ CGGIK L+ Sbjct: 100 LHLKVSNIVVIGHSACGGIKGLLS 123 >2A5V-A nrPDB Length = 213 Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/187 (21%), Positives = 74/187 (39%), Gaps = 38/187 (20%) Query: 37 PTLFPDHNA---KGQSPHTLFIGCSDSRYNENCL---GVLPGEVFTWKNVANICHSEDLT 90 P+ DH A GQ P + GC+DSR + G+ G++F + ++ S L Sbjct: 34 PSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGL--GDMFVVRTAGHVIDSAVL- 90 Query: 91 LKATLEFAIICLKVNKVIICGHTDCGGIKTCLTN----------QREALPKVNCSHLYKY 140 ++E+A+ L V +++ GH CG + L R+ + +V S L Sbjct: 91 --GSIEYAVTVLNVPLIVVLGHDSCGAVNAALAAINDGTLPGGYVRDVVERVAPSVLLGR 148 Query: 141 LDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGELQVYGL 200 D + + E +++ H V R + + + G L + G+ Sbjct: 149 RDGLSRVDEFEQRHV--------------HETVAILMAR---SSAISERIAGGSLAIVGV 191 Query: 201 LYNVEDG 207 Y ++DG Sbjct: 192 TYQLDDG 198 >1G5C-A nrPDB Length = 170 Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 16/102 (15%) Query: 18 LQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYN---ENCLGVLPGEV 74 ++DIL N + F D + SP I C DSR E LG+ G+ Sbjct: 3 IKDILRENQDFR----------FRDLSDLKHSPKLCIITCMDSRLIDLLERALGIGRGDA 52 Query: 75 FTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCG 116 KN NI +D +++ AI L N++II GHTDCG Sbjct: 53 KVIKNAGNIV--DDGVIRSA-AVAIYALGDNEIIIVGHTDCG 91 >1YLK-A nrPDB Length = 172 Score = 33.9 bits (76), Expect = 0.053, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 12/99 (12%) Query: 19 QDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYN-ENCLGVLPGEVFTW 77 D LA N +AS P P S H + C D+R + LG+ GE Sbjct: 14 DDYLANNVDYASGFKG--PLPMP------PSKHIAIVACMDARLDVYRMLGIKEGEAHVI 65 Query: 78 KNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCG 116 +N C D ++ +L + L ++I+ HTDCG Sbjct: 66 RNAG--CVVTDDVIR-SLAISQRLLGTREIILLHHTDCG 101 >3W0L-B nrPDB Length = 619 Score = 33.1 bits (74), Expect = 0.088, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 4/86 (4%) Query: 129 LPKVNCSHLYKYLDDIDT-MYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQ 187 L K + S L + L D D ++ EE +NLIH +S + +V ++ +++NP Sbjct: 41 LDKADPSQLVQLLRDCDAEIFQEEDENLIHYHRLYSESVLKTMGDVAKRVQEVLKNPDDS 100 Query: 188 TAVQNG---ELQVYGLLYNVEDGLLQ 210 V +G ++ LL N +GLL+ Sbjct: 101 LVVLSGCGTSGRLALLLANSFNGLLK 126 >3TEO-A nrPDB Length = 204 Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query: 57 CSDSRYN-ENCLGVLPGEVFTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDC 115 C D R + E LG+ P + ++N I ++D A+L K ++I+ HTDC Sbjct: 35 CMDERVHIEQSLGIQPDDAHIYRNAGGIV-TDDAIRSASLTTNFFGTK--EIIVVTHTDC 91 Query: 116 GGIK 119 G ++ Sbjct: 92 GMLR 95 >5ZTP-A nrPDB Length = 169 Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust. Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 12/119 (10%) Query: 19 QDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNE-NCLGVLPGEVFTW 77 Q + AAN + + + P +GC D+R + G+ G+ Sbjct: 6 QSLPAANEAYVAAFGDKGSLPLP------PGKRVAIVGCMDARLDTFGATGLHEGDAHHI 59 Query: 78 KNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSH 136 +N +L + E L +VI+ HTDC G+ T ++Q L K +H Sbjct: 60 RNAGGRASDALRSLVISQEL----LGTREVIVIHHTDC-GMLTFRSDQLHGLVKKRVAH 113 >5ZLM-A nrPDB Length = 513 Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 10/92 (10%) Query: 107 VIICGHTDCGGIKTCLTNQR-------EALPKVNCSHLYKYLDDIDTMYHEESQNLIHLK 159 +I+ CGG T+ + L + + S KYL ++ HE QN+ LK Sbjct: 314 IILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLK 373 Query: 160 ---TQREKSHYLSHCNVKRQFNRIIENPTVQT 188 TQ E + N KR + + E P V T Sbjct: 374 LAGTQDEYGRPVLLLNNKRWHDPVTETPKVGT 405 >4R9X-A nrPDB Length = 233 Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust. Identities = 19/97 (19%), Positives = 44/97 (45%), Gaps = 6/97 (6%) Query: 107 VIICGHTDCGGIKTCLTNQREALPKVNCSHLYKYLDDIDTMYH---EESQNLIHLKTQRE 163 +++ G+ + N+R + + + L +D I+ YH ++ +N + + Sbjct: 77 IVVAQKLGVAGVVLGVLNERNEVAEEKLADLLSVVDGINVTYHRAIDDIENPVEAMRTLK 136 Query: 164 KSHYLSHCNVKRQFNRIIENPTVQTAVQ---NGELQV 197 K H ++H I++N V T +Q +G++Q+ Sbjct: 137 KFHKVTHVLTSGGQGNIVDNIPVLTDMQKISDGQIQL 173 >3I77-A nrPDB Length = 230 Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust. Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Query: 81 ANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTC 121 AN+ D +++ F ++ N++I G+ D GG+ TC Sbjct: 138 ANVPFVSDAACRSSSSFILV---ANEMICAGYPDTGGVDTC 175 >1YIX-A nrPDB Length = 265 Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust. Identities = 10/20 (50%), Positives = 12/20 (60%) Query: 113 TDCGGIKTCLTNQREALPKV 132 TDCGG+ C T RE K+ Sbjct: 148 TDCGGVLHCFTEDRETAGKL 167 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3EYX-A nrPDB 288 9e-79 5JJ8-A nrPDB 263 5e-71 4ZNZ-A nrPDB 257 4e-69 3QY1-A nrPDB 255 1e-68 5CXK-A nrPDB 253 3e-68 4O1K-A nrPDB 248 1e-66 1DDZ-A nrPDB 246 8e-66 3E2W-A nrPDB 245 1e-65 4O1J-A nrPDB 234 2e-62 3UCK-A nrPDB 230 5e-61 6GWU-A nrPDB 222 8e-59 2W3N-A nrPDB 206 6e-54 5SWC-A nrPDB 180 4e-46 2A5V-A nrPDB 136 1e-32 1EKJ-A nrPDB 127 4e-30 1G5C-A nrPDB 113 7e-26 Sequences not found previously or not previously below threshold: 3VRK-A nrPDB 64 5e-11 1YLK-A nrPDB 61 3e-10 3TEO-A nrPDB 59 1e-09 3LAS-A nrPDB 58 2e-09 5ZTP-A nrPDB 47 5e-06 2D81-A nrPDB 31 0.35 3DOO-A nrPDB 30 0.94 3GCF-A nrPDB 29 1.5 >3EYX-A nrPDB Length = 216 Score = 288 bits (738), Expect = 9e-79, Method: Composition-based stats. Identities = 208/209 (99%), Positives = 208/209 (99%) Query: 13 SHNSNLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENCLGVLPG 72 HNSNLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENCLGVLPG Sbjct: 8 GHNSNLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENCLGVLPG 67 Query: 73 EVFTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKV 132 EVFTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKV Sbjct: 68 EVFTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKV 127 Query: 133 NCSHLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQN 192 NCSHLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQN Sbjct: 128 NCSHLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQN 187 Query: 193 GELQVYGLLYNVEDGLLQTVSTYTKVTPK 221 GELQVYGLLYNVEDGLLQTVSTYTKVTPK Sbjct: 188 GELQVYGLLYNVEDGLLQTVSTYTKVTPK 216 >5JJ8-A nrPDB Length = 215 Score = 263 bits (671), Expect = 5e-71, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 111/212 (52%), Gaps = 14/212 (6%) Query: 16 SNLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNEN-CLGVLPGEV 74 S+LQ + N +WA + P F A+ Q+P L+IGCSD+R N +G+LPG++ Sbjct: 2 SDLQQLFENNVRWAEAIKQEDPDFFAKL-ARQQTPEYLWIGCSDARVPANEIVGMLPGDL 60 Query: 75 FTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNC 134 F +NVAN+ DL + ++FA+ LKV +++ GH CGG++ L N + L Sbjct: 61 FVHRNVANVVLHTDLNCLSVIQFAVDVLKVKHILVTGHYGCGGVRASLHNDQLGL----- 115 Query: 135 SHLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGE 194 + +L I + +E ++L L T+ E+ L NV +Q + VQ A G+ Sbjct: 116 --IDGWLRSIRDLAYEYREHLEQLPTEEERVDRLCELNVIQQVANVSHTSIVQNAWHRGQ 173 Query: 195 -LQVYGLLYNVEDGLLQTVST----YTKVTPK 221 L V+G +Y ++DGL + ++ ++ P+ Sbjct: 174 SLSVHGCIYGIKDGLWKNLNVTVSGLDQLPPQ 205 >4ZNZ-A nrPDB Length = 220 Score = 257 bits (655), Expect = 4e-69, Method: Composition-based stats. Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 11/202 (5%) Query: 17 NLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYN-ENCLGVLPGEVF 75 ++ +++ NA W+ + P F + A+ Q P L+IGCSDSR E G+ PGE+F Sbjct: 3 DIDTLISNNALWSKMLVEEDPGFF-EKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELF 61 Query: 76 TWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCS 135 +NVAN+ DL + +++A+ L+V +IICGH CGG++ + N L Sbjct: 62 VHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPELGL------ 115 Query: 136 HLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGE- 194 + +L I ++ + S L + +R + L NV Q + + +Q+A + G+ Sbjct: 116 -INNWLLHIRDIWFKHSSLLGEMPQER-RLDTLCELNVMEQVYNLGHSTIMQSAWKRGQK 173 Query: 195 LQVYGLLYNVEDGLLQTVSTYT 216 + ++G Y + DGLL+ + Sbjct: 174 VTIHGWAYGIHDGLLRDLDVTA 195 >3QY1-A nrPDB Length = 223 Score = 255 bits (651), Expect = 1e-68, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 11/202 (5%) Query: 17 NLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYN-ENCLGVLPGEVF 75 ++ +++ NA W+ + P F + A+ Q P L+IGCSDSR E G+ PGE+F Sbjct: 6 DIDTLISNNALWSKMLVEEDPGFF-EKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELF 64 Query: 76 TWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCS 135 +NVAN+ DL + +++A+ L+V +IICGH+ CGGIK + N L Sbjct: 65 VHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHSGCGGIKAAVENPELGL------ 118 Query: 136 HLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGE- 194 + +L I ++ + S L + + ++ L NV Q + + +Q+A + G+ Sbjct: 119 -INNWLLHIRDIWLKHSSLLGKMP-EEQRLDALYELNVMEQVYNLGHSTIMQSAWKRGQN 176 Query: 195 LQVYGLLYNVEDGLLQTVSTYT 216 + ++G Y++ DGLL+ + Sbjct: 177 VTIHGWAYSINDGLLRDLDVTA 198 >5CXK-A nrPDB Length = 222 Score = 253 bits (647), Expect = 3e-68, Method: Composition-based stats. Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 11/200 (5%) Query: 17 NLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYN-ENCLGVLPGEVF 75 ++ + N+KW++ + P F AKGQ+P L+IGC+DSR E G+ GE+F Sbjct: 3 EIKQLFENNSKWSASIKAETPEYFAKL-AKGQNPDFLWIGCADSRVPAERLTGLYSGELF 61 Query: 76 TWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCS 135 +NVAN DL + +++A+ L+V +I+CGH CGG+ + N + L Sbjct: 62 VHRNVANQVIHTDLNCLSVVQYAVDVLQVKHIIVCGHYGCGGVTAAIDNPQLGL------ 115 Query: 136 HLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGE- 194 + +L I Y + + L + ++S L+ NV Q + + +Q A + G+ Sbjct: 116 -INNWLLHIRDYYLKHREYLDKMP-AEDRSDKLAEINVAEQVYNLANSTVLQNAWERGQA 173 Query: 195 LQVYGLLYNVEDGLLQTVST 214 ++V+G +Y +EDG L+ + Sbjct: 174 VEVHGFVYGIEDGRLEYLGV 193 >4O1K-A nrPDB Length = 233 Score = 248 bits (633), Expect = 1e-66, Method: Composition-based stats. Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 10/198 (5%) Query: 19 QDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYN-ENCLGVLPGEVFTW 77 + N WA++ P F A GQ+P L+IGCSDSR E G+ PG+ F Sbjct: 19 DKVFENNKSWATEQVAKDPDFFKKL-AAGQNPEYLWIGCSDSRIPAEQITGLQPGDAFVH 77 Query: 78 KNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSHL 137 +N+AN+ + DL + + +E+A+ LKV +++CGH CGG+K +T + L + Sbjct: 78 RNIANLVCNTDLNVMSVIEYAVKHLKVKHIVVCGHYGCGGVKAAMTPKDLGL-------M 130 Query: 138 YKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTA-VQNGELQ 196 +L +I +Y + L + + + L NV Q +++ +Q + +NG Sbjct: 131 NPWLRNIRDVYRLHEKELDAIADEEARYERLVELNVYEQCRNVVKTAALQQSYAENGFPV 190 Query: 197 VYGLLYNVEDGLLQTVST 214 ++G ++N DGLL+ ++ Sbjct: 191 IHGWVFNFRDGLLKDLNV 208 >1DDZ-A nrPDB Length = 496 Score = 246 bits (627), Expect = 8e-66, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 99/199 (49%), Gaps = 10/199 (5%) Query: 19 QDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENCLGVLP-GEVFTW 77 +I A N W +M P F + A GQSP L+IGC+DSR N L LP GEVF Sbjct: 37 SNIFANNEAWRQEMLKQDPEFF-NRLANGQSPEYLWIGCADSRVPANQLLDLPAGEVFVH 95 Query: 78 KNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSHL 137 +N+AN C D++ + L++A+ LKV +++CGH CGG K L + R L + Sbjct: 96 RNIANQCIHSDISFLSVLQYAVQYLKVKHILVCGHYGCGGAKAALGDSRLGL-------I 148 Query: 138 YKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGE-LQ 196 +L I + ++ L K E+ + L NV Q + + VQ A G+ L Sbjct: 149 DNWLRHIRDVRRMNAKYLDKCKDGDEELNRLIELNVLEQVHNVCATSIVQDAWDAGQELT 208 Query: 197 VYGLLYNVEDGLLQTVSTY 215 V G++Y V DG L+ + Sbjct: 209 VQGVVYGVGDGKLRDLGVV 227 Score = 226 bits (577), Expect = 4e-60, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 96/200 (48%), Gaps = 10/200 (5%) Query: 20 DILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENCLGVLP-GEVFTWK 78 + N W +M P F + A Q+P L+IGC+DSR N + LP GEVF + Sbjct: 292 RVFVNNENWRQKMLKQDPQFFSNL-AHTQTPEILWIGCADSRVPANQIINLPAGEVFVHR 350 Query: 79 NVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSHLY 138 N+AN C D++ + L++A+ LKV +V++CGH CGG L + R L + Sbjct: 351 NIANQCIHSDMSFLSVLQYAVQYLKVKRVVVCGHYACGGCAAALGDSRLGL-------ID 403 Query: 139 KYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGE-LQV 197 +L I + L + ++ + L NV Q + + VQ A G+ L+V Sbjct: 404 NWLRHIRDVRRHNQAELSRITDPKDSLNRLIEINVLEQMHNVCATSIVQDAWDAGQELEV 463 Query: 198 YGLLYNVEDGLLQTVSTYTK 217 G++Y V DG L+ + K Sbjct: 464 QGVVYGVGDGKLRDMGVVAK 483 >3E2W-A nrPDB Length = 229 Score = 245 bits (626), Expect = 1e-65, Method: Composition-based stats. Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 11/201 (5%) Query: 18 LQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYN-ENCLGVLPGEVFT 76 ++ + A N WA +M T F + A Q+PH L+IGCSDSR E + PGE+F Sbjct: 4 IKQLFANNYSWAQRMKEENSTYFKEL-ADHQTPHYLWIGCSDSRVPAEKLTNLEPGELFV 62 Query: 77 WKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSH 136 +NVAN D + +++A+ LK+ +IICGHT+CGGI + ++ L Sbjct: 63 HRNVANQVIHTDFNCLSVVQYAVDVLKIEHIIICGHTNCGGIHAAMADKDLGL------- 115 Query: 137 LYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGE-L 195 + +L I ++ + L L ++ ++ L+ NV Q + V++A + G+ L Sbjct: 116 INNWLLHIRDIWFKHGHLLGKLSPEK-RADMLTKINVAEQVYNLGRTSIVKSAWERGQKL 174 Query: 196 QVYGLLYNVEDGLLQTVSTYT 216 ++G +++V DG L Sbjct: 175 SLHGWVFDVNDGFLVDQGVMA 195 >4O1J-A nrPDB Length = 255 Score = 234 bits (597), Expect = 2e-62, Method: Composition-based stats. Identities = 61/196 (31%), Positives = 107/196 (54%), Gaps = 8/196 (4%) Query: 22 LAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNEN-CLGVLPGEVFTWKNV 80 L++N WA + P FP A GQ+P L+IGCSDSR E LG+ PG+VF +N+ Sbjct: 22 LSSNNAWAGYKAHQNPHFFPKL-AGGQAPEILWIGCSDSRCPETTILGMQPGDVFVHRNI 80 Query: 81 ANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSHLYKY 140 ANI D+ A +E+A+ LKV +++CGH+ CGG L++ R L + Sbjct: 81 ANIVSPTDINTTAVIEYAVAHLKVKHIVLCGHSACGGAAGALSDGRIG------GVLDTW 134 Query: 141 LDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGELQVYGL 200 L + T+ + ++ L + ++E+ ++ NV+ ++ NPT++ A+ L+V+G+ Sbjct: 135 LLPLKTVRYNHAEELDAITDEKERVIRIAQLNVEAGIKVLMNNPTIREAIAERGLEVHGV 194 Query: 201 LYNVEDGLLQTVSTYT 216 +++ G ++ + T Sbjct: 195 FFDIGCGRIKELGCGT 210 >3UCK-A nrPDB Length = 227 Score = 230 bits (585), Expect = 5e-61, Method: Composition-based stats. Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 9/199 (4%) Query: 16 SNLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRY-NENCLGVLPGEV 74 ++L +L AN KWA + T F A Q+P L+IGC+DSR + PGEV Sbjct: 7 ADLSPLLEANRKWADECAAKDSTYFSK-VAGSQAPEYLYIGCADSRVSPAQLFNMAPGEV 65 Query: 75 FTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNC 134 F +NV N+ ++DL + LE+ + LK+ +++CGH +CG K L + N Sbjct: 66 FVQRNVGNLVSNKDLNCMSCLEYTVDHLKIKHILVCGHYNCGACKAGLVWHPKTAGVTNL 125 Query: 135 SHLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGE 194 ++ D+ + + + L H + + + NV+ Q + +P VQ A G+ Sbjct: 126 -----WISDVREVRDKNAAKL-HGLSADDAWDKMVELNVEAQVFNVCASPIVQAAWARGQ 179 Query: 195 -LQVYGLLYNVEDGLLQTV 212 L V+G++Y GL++ + Sbjct: 180 PLSVHGIVYTPGTGLVKEL 198 >6GWU-A nrPDB Length = 208 Score = 222 bits (566), Expect = 8e-59, Method: Composition-based stats. Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 13/209 (6%) Query: 10 FTLSHNSNLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENCLGV 69 FTLS S LQD L N + + + D N +GQSPHTL+IGCSDSR + CL Sbjct: 4 FTLSSESTLQDFLNNNKFFVDSIKHNHGNQIFDLNGQGQSPHTLWIGCSDSRAGDQCLAT 63 Query: 70 LPGEVFTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREAL 129 LPGE+F +N+ANI ++ D++ + ++FAI LKV K+I+CGHTDCGGI L+ ++ Sbjct: 64 LPGEIFVHRNIANIVNANDISSQGVIQFAIDVLKVKKIIVCGHTDCGGIWASLSKKKIG- 122 Query: 130 PKVNCSHLYKYLDDIDTMYHEESQNLIHLKTQRE----KSHYLSHCNVKRQFNRIIENPT 185 L +L+ + H + NL L+ + K+ L+ NV + +P+ Sbjct: 123 -----GVLDLWLNPVR---HIRAANLKLLEEYNQDPKLKAKKLAELNVISSVTALKRHPS 174 Query: 186 VQTAVQNGELQVYGLLYNVEDGLLQTVST 214 A++ E++V+G+LY+V G L V Sbjct: 175 ASVALKKNEIEVWGMLYDVATGYLSQVEI 203 >2W3N-A nrPDB Length = 239 Score = 206 bits (524), Expect = 6e-54, Method: Composition-based stats. Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 16/205 (7%) Query: 17 NLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNE-NCLGVLPGEVF 75 ++++L N WA ++ + +P + KGQ+P+ L+IGC+DSR E + PG+VF Sbjct: 29 EIREVLEGNRYWARKVTSEEPEFMAEQ-VKGQAPNFLWIGCADSRVPEVTIMARKPGDVF 87 Query: 76 TWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCS 135 +NVAN ED + +A L +AI+ + V V++ GHT CGG + Sbjct: 88 VQRNVANQFKPEDDSSQALLNYAIMNVGVTHVMVVGHTGCGGCIAAFDQPLPTEENPGGT 147 Query: 136 HLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQ---N 192 L +YL+ I + H + + L NVK ++ +PT+Q A + Sbjct: 148 PLVRYLEPIIRLKHSLPEG--------SDVNDLIKENVKMAVKNVVNSPTIQGAWEQARK 199 Query: 193 GELQ---VYGLLYNVEDGLLQTVST 214 GE + V+G LY++ G + ++ Sbjct: 200 GEFREVFVHGWLYDLSTGNIVDLNV 224 >5SWC-A nrPDB Length = 239 Score = 180 bits (456), Expect = 4e-46, Method: Composition-based stats. Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 29/207 (14%) Query: 15 NSNLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENCLGVLP-GE 73 S++Q ++ K+ + LF + + GQ P LFI CSDSR + N + G+ Sbjct: 17 GSHMQRLIEGLQKFREGYFSSHRDLF-EQLSHGQHPRILFICCSDSRVDPNLITQSEVGD 75 Query: 74 VFTWKNVANICHSEDLTLKAT---LEFAIICLKVNKVIICGHTDCGGIKTCLT--NQREA 128 +F +N NI +E+A++ L++N++I+CGH+ CG +K L + +E Sbjct: 76 LFVIRNAGNIIPPYGAANGGEGAAMEYALVALEINQIIVCGHSHCGAMKGLLKLNSLQEK 135 Query: 129 LPKVNCSHLYKYLDD--------IDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRI 180 LP V Y +L +D H E ++LI + N+ Q + Sbjct: 136 LPLV-----YDWLKHTEATRRLVLDNYSHLEGEDLIEVAVAE---------NILTQLKNL 181 Query: 181 IENPTVQTAVQNGELQVYGLLYNVEDG 207 P + + + G+L ++G +Y +E+G Sbjct: 182 QTYPAIHSRLHRGDLSLHGWIYRIEEG 208 >2A5V-A nrPDB Length = 213 Score = 136 bits (341), Expect = 1e-32, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 78/204 (38%), Gaps = 35/204 (17%) Query: 19 QDILAANAKWASQMNNIQPTLFPDHNAK---GQSPHTLFIGCSDSRYNENCL-GVLPGEV 74 + + N ++ + P+ DH A GQ P + GC+DSR + G++ Sbjct: 17 KALKEGNERFVAG-RPQHPSQSVDHRAGLAAGQKPTAVIFGCADSRVAAEIIFDQGLGDM 75 Query: 75 FTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTN---------- 124 F + ++ S L ++E+A+ L V +++ GH CG + L Sbjct: 76 FVVRTAGHVIDSAVL---GSIEYAVTVLNVPLIVVLGHDSCGAVNAALAAINDGTLPGGY 132 Query: 125 QREALPKVNCSHLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENP 184 R+ + +V S L D + + E +++ H V R + Sbjct: 133 VRDVVERVAPSVLLGRRDGLSRVDEFEQRHV--------------HETVAILMAR---SS 175 Query: 185 TVQTAVQNGELQVYGLLYNVEDGL 208 + + G L + G+ Y ++DG Sbjct: 176 AISERIAGGSLAIVGVTYQLDDGR 199 >1EKJ-A nrPDB Length = 221 Score = 127 bits (318), Expect = 4e-30, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 11/186 (5%) Query: 28 WASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRY-NENCLGVLPGEVFTWKNVANICHS 86 + + + P L+ + AKGQSP + CSDSR + L PGE F +NVAN+ Sbjct: 24 FKKEKYDKNPALYGEL-AKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPP 82 Query: 87 ED----LTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSHLYKYLD 142 D A +E+A++ LKV+ +++ GH+ CGGIK L+ + + + +++ Sbjct: 83 YDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDG--TYSTDFIEEWVK 140 Query: 143 -DIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGELQVYGLL 201 + ++Q+ E + V ++ P V+ + N L + G Sbjct: 141 IGLPAKAKVKAQHGD--APFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGY 198 Query: 202 YNVEDG 207 Y+ G Sbjct: 199 YDFVKG 204 >1G5C-A nrPDB Length = 170 Score = 113 bits (282), Expect = 7e-26, Method: Composition-based stats. Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 37/198 (18%) Query: 18 LQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYN---ENCLGVLPGEV 74 ++DIL N + F D + SP I C DSR E LG+ G+ Sbjct: 3 IKDILRENQDFR----------FRDLSDLKHSPKLCIITCMDSRLIDLLERALGIGRGDA 52 Query: 75 FTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNC 134 KN NI +D +++ AI L N++II GHTDCG + +++ Sbjct: 53 KVIKNAGNIV--DDGVIRSA-AVAIYALGDNEIIIVGHTDCG------------MARLDE 97 Query: 135 SHLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGE 194 + + ++ E + + + NV R+ +P + ++ Sbjct: 98 DLIVSRMRELG----VEEEVIENFSIDVLNPVGDEEENVIEGVKRLKSSPLIPESI---- 149 Query: 195 LQVYGLLYNVEDGLLQTV 212 V+GL+ ++ G L+ + Sbjct: 150 -GVHGLIIDINTGRLKPL 166 >3VRK-A nrPDB Length = 219 Score = 64.0 bits (154), Expect = 5e-11, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 77/212 (36%), Gaps = 19/212 (8%) Query: 16 SNLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYN-ENCLGVLPGEV 74 SN +L N +A +P P S + C D+R + E+ LG+ GE Sbjct: 4 SNTDALLENNRLYAGGQATHRPGH-PGMQPIQPSRRVAVVACMDARLDVEDLLGLQTGEA 62 Query: 75 FTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCG-----------GIKTCLT 123 +N + + + + L +++I+ HT CG G++ Sbjct: 63 HIIRNAGGVINEDAIRCLIISHH---LLNTHEIILVHHTRCGMLAFTDDLLRAGLEGDAA 119 Query: 124 NQREALPKVNCSHLYKYLDDIDTMYHEESQNLIHLKTQ--REKSHYLSHCNVKRQFNRII 181 ++ + + + + + S +V+R + I+ Sbjct: 120 AEKLIGQATGRAFVSAGKASASPAAFQAFRGPPEPLDAPRSDASTERIAADVRRGLSIIL 179 Query: 182 ENPTVQTAVQNGELQVYGLLYNVEDGLLQTVS 213 +P + TA + + V G +Y+V+ G L+ VS Sbjct: 180 NHPWLPTAGPDA-ITVRGFIYDVDTGRLEEVS 210 >1YLK-A nrPDB Length = 172 Score = 61.3 bits (147), Expect = 3e-10, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 66/200 (33%), Gaps = 39/200 (19%) Query: 14 HNSNLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNE-NCLGVLPG 72 + D LA N +AS P H A + C D+R + LG+ G Sbjct: 9 SGTVTDDYLANNVDYASGFKGPLPMPPSKHIA--------IVACMDARLDVYRMLGIKEG 60 Query: 73 EVFTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKV 132 E +N + + + A + L ++I+ HTDCG + + + A+ Sbjct: 61 EAHVIRNAGCVVTDDVIRSLAISQ---RLLGTREIILLHHTDCGMLTFTDDDFKRAIQDE 117 Query: 133 NCSHLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQN 192 I + ES E V++ RI NP V Sbjct: 118 T---------GIRPTWSPES-----YPDAVED--------VRQSLRRIEVNPFVTK---- 151 Query: 193 GELQVYGLLYNVEDGLLQTV 212 + G +++V G L V Sbjct: 152 -HTSLRGFVFDVATGKLNEV 170 >3TEO-A nrPDB Length = 204 Score = 59.0 bits (141), Expect = 1e-09, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 57/162 (35%), Gaps = 12/162 (7%) Query: 53 LFI-GCSDSRY-NENCLGVLPGEVFTWKNVANICHSEDLTLKATLEFAIICLKVNKVIIC 110 L++ C D R E LG+ P + ++N I D +++ ++I+ Sbjct: 30 LWVLTCMDERVHIEQSLGIQPDDAHIYRNAGGIV--TDDAIRSA-SLTTNFFGTKEIIVV 86 Query: 111 GHTDCGGIKTCLTNQREALPKVNCSHLYKYLDDIDTMYHEESQN--LIHLKTQREKSHYL 168 HTDCG ++ + LD + + S+ + K + Sbjct: 87 THTDCGMLRFTGEEVAKYFISKGIKPTEVQLDPLLPAFRISSEEDFIKWFKFYEDLGVKS 146 Query: 169 SHCNVKRQFNRIIENPTVQTAVQNGELQVYGLLYNVEDGLLQ 210 + + +P + ++++ G +Y VE L+ Sbjct: 147 PDEMALKGVEILRNHPLIPK-----DVRITGYVYEVETHRLR 183 >3LAS-A nrPDB Length = 166 Score = 58.3 bits (139), Expect = 2e-09, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 60/199 (30%), Gaps = 37/199 (18%) Query: 16 SNLQDILAANAKWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRY-NENCLGVLPGEV 74 S + + AN + L P + C DSR LG+ G+ Sbjct: 4 SYFDNFIKANQAYVDLHGTAHLPLKPKTRVA-------IVTCMDSRLHVAPALGLALGDA 56 Query: 75 FTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNC 134 +N + + E L +++++ HTDCG E L + Sbjct: 57 HILRNAGGRVTDDVIRSLVISE---QQLGTSEIVVLHHTDCGAQTFTNAEFTEQLKRDLA 113 Query: 135 SHLYKYLDDIDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGE 194 + Q +V+ + +P + + Sbjct: 114 ---------------------VDAGDQDFLPFTDIEESVREDIALLKNSPLIPE-----D 147 Query: 195 LQVYGLLYNVEDGLLQTVS 213 + + G +Y+V+ G ++ V+ Sbjct: 148 IIISGAIYDVDTGRVREVN 166 >5ZTP-A nrPDB Length = 169 Score = 47.1 bits (110), Expect = 5e-06, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 57/186 (30%), Gaps = 32/186 (17%) Query: 30 SQMNNIQPTLFPDHNAKGQSP-----HTLFIGCSDSRYNE-NCLGVLPGEVFTWKNVANI 83 + KG P +GC D+R + G+ G+ +N Sbjct: 6 QSLPAANEAYVAAFGDKGSLPLPPGKRVAIVGCMDARLDTFGATGLHEGDAHHIRNAGGR 65 Query: 84 CHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLTNQREALPKVNCSHLYKYLDD 143 +L + L +VI+ HTDCG + T ++Q L K Sbjct: 66 ASDA----LRSLVISQELLGTREVIVIHHTDCG-MLTFRSDQLHGLVK------------ 108 Query: 144 IDTMYHEESQNLIHLKTQREKSHYLSHCNVKRQFNRIIENPTVQTAVQNGELQVYGLLYN 203 + HE + L ++K + +P + E + G Y Sbjct: 109 -KRVAHEHFAAVDSLACLEFPD---VDESIKEDVAFLKNHPLILP-----ETVISGYRYE 159 Query: 204 VEDGLL 209 VE G L Sbjct: 160 VETGKL 165 >2D81-A nrPDB Length = 318 Score = 31.3 bits (69), Expect = 0.35, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 20/52 (38%) Query: 32 MNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENCLGVLPGEVFTWKNVANI 83 M + GQ ++ G SD+ N + L ++ + N AN+ Sbjct: 74 MKSWSGNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDNSANV 125 >3DOO-A nrPDB Length = 277 Score = 29.7 bits (65), Expect = 0.94, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 41/142 (28%), Gaps = 27/142 (19%) Query: 102 LKVNKVIICGHTDCGGIKTCLTN-------QREALPKVNCSHLYKYLDDIDTMYHEESQ- 153 ++ ++I G GG + N + S + +I+ + ++ Sbjct: 115 IEDAYILILG---AGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAES 171 Query: 154 NLIHL--------KTQREKSHYLSHCN-------VKRQFNRIIENPTVQTAVQNGELQVY 198 +L + + N V + P + A Q G Sbjct: 172 HLDEFDIIINTTPAGMNGNTDSVISLNRLASHTLVSDIVYNPYKTPILIEAEQRGNPIYN 231 Query: 199 GLLYNVEDGLLQTVSTYTKVTP 220 GL V G ++ +T + P Sbjct: 232 GLDMFVHQG-AESFKIWTNLEP 252 >3GCF-A nrPDB Length = 394 Score = 29.0 bits (63), Expect = 1.5, Method: Composition-based stats. Identities = 6/15 (40%), Positives = 10/15 (66%) Query: 198 YGLLYNVEDGLLQTV 212 +G Y+++DG L V Sbjct: 99 HGWTYDLDDGRLVDV 113 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.125 0.335 Lambda K H 0.267 0.0389 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,422,285 Number of Sequences: 36641 Number of extensions: 253033 Number of successful extensions: 876 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 744 Number of HSP's gapped (non-prelim): 59 length of query: 221 length of database: 10,336,785 effective HSP length: 93 effective length of query: 128 effective length of database: 6,929,172 effective search space: 886934016 effective search space used: 886934016 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 57 (26.6 bits)