BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P53602 (400 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3D4J-A nrPDB 828 0.0 3F0N-A nrPDB 666 0.0 1FI4-A nrPDB 328 3e-90 2HKE-A nrPDB 272 2e-73 5GMD-A nrPDB 207 5e-54 5V2M-A nrPDB 135 3e-32 3QT5-A nrPDB 135 4e-32 2HK2-A nrPDB 131 4e-31 3LTO-A nrPDB 79 5e-15 2GS8-A nrPDB 78 5e-15 5MTZ-A nrPDB 33 0.18 3BFJ-A nrPDB 32 0.39 2QA1-A nrPDB 31 1.2 3SLC-A nrPDB 30 1.4 3PZL-A nrPDB 30 1.6 2OBL-A nrPDB 30 2.5 4P52-A nrPDB 30 2.7 2Z6H-A nrPDB 29 4.3 2GL7-A nrPDB 28 6.2 >3D4J-A nrPDB Length = 400 Score = 828 bits (2138), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/400 (100%), Positives = 400/400 (100%) Query: 1 MASEKPLAAVTCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDF 60 MASEKPLAAVTCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDF Sbjct: 1 MASEKPLAAVTCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDF 60 Query: 61 TEDRIWLNGREEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPT 120 TEDRIWLNGREEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPT Sbjct: 61 TEDRIWLNGREEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPT 120 Query: 121 AAGLASSAAGYACLAYTLARVYGVESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKD 180 AAGLASSAAGYACLAYTLARVYGVESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKD Sbjct: 121 AAGLASSAAGYACLAYTLARVYGVESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKD 180 Query: 181 SIARQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEM 240 SIARQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEM Sbjct: 181 SIARQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEM 240 Query: 241 ARCIRERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKV 300 ARCIRERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKV Sbjct: 241 ARCIRERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKV 300 Query: 301 AYTFDAGPNAVIFTLDDTVAEFVAAVWHGFPPGSNGDTFLKGLQVRPAPLSAELQAALAM 360 AYTFDAGPNAVIFTLDDTVAEFVAAVWHGFPPGSNGDTFLKGLQVRPAPLSAELQAALAM Sbjct: 301 AYTFDAGPNAVIFTLDDTVAEFVAAVWHGFPPGSNGDTFLKGLQVRPAPLSAELQAALAM 360 Query: 361 EPTPGGVKYIIVTQVGPGPQILDDPCAHLLGPDGLPKPAA 400 EPTPGGVKYIIVTQVGPGPQILDDPCAHLLGPDGLPKPAA Sbjct: 361 EPTPGGVKYIIVTQVGPGPQILDDPCAHLLGPDGLPKPAA 400 >3F0N-A nrPDB Length = 414 Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/388 (85%), Positives = 350/388 (90%) Query: 10 VTCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFTEDRIWLNG 69 VTCTAPVNIAVIKYWGKRDE L+LPINSSLSVTLHQDQLKTTTT ISKDFTEDRIWLNG Sbjct: 24 VTCTAPVNIAVIKYWGKRDEALILPINSSLSVTLHQDQLKTTTTVAISKDFTEDRIWLNG 83 Query: 70 REEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAAGLASSAA 129 REEDVGQPRLQACLREIR LARKRR++ DGD LP SLS KVHVASVNNFPTAAGLASSAA Sbjct: 84 REEDVGQPRLQACLREIRRLARKRRSTEDGDTLPLSLSYKVHVASVNNFPTAAGLASSAA 143 Query: 130 GYACLAYTLARVYGVESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQVAPE 189 GYACLAYTLA+VYGVE DLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQ+APE Sbjct: 144 GYACLAYTLAQVYGVEGDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQIAPE 203 Query: 190 SHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEMARCIRERDF 249 HWP+LR+LILVVSA+KK TGSTVGM+ SVETS LL+FRAESVVP RM EM RCI+E+DF Sbjct: 204 WHWPQLRILILVVSADKKQTGSTVGMQTSVETSTLLKFRAESVVPERMKEMTRCIQEQDF 263 Query: 250 PSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKVAYTFDAGPN 309 FAQLTMKDSNQFHATCLDTFPPISYLN S RII LVHRFN HHG TKVAYTFDAGPN Sbjct: 264 QGFAQLTMKDSNQFHATCLDTFPPISYLNDTSRRIIQLVHRFNTHHGQTKVAYTFDAGPN 323 Query: 310 AVIFTLDDTVAEFVAAVWHGFPPGSNGDTFLKGLQVRPAPLSAELQAALAMEPTPGGVKY 369 AVIFTL+DTVAEFVAAV H FPP +NGD FLKGLQV P LS EL+AAL +EP+PGGV+Y Sbjct: 324 AVIFTLEDTVAEFVAAVRHSFPPAANGDKFLKGLQVAPVLLSDELKAALVVEPSPGGVQY 383 Query: 370 IIVTQVGPGPQILDDPCAHLLGPDGLPK 397 II TQVGPGPQ+LDD HLLG DGLP+ Sbjct: 384 IIATQVGPGPQVLDDTHDHLLGQDGLPQ 411 >1FI4-A nrPDB Length = 416 Score = 328 bits (841), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 187/401 (46%), Positives = 247/401 (61%), Gaps = 10/401 (2%) Query: 3 SEKPLAAVTCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFTE 62 S + + TAPVNIA +KYWGKRD +L LP NSS+SVTL QD L+T T+A + +F Sbjct: 19 SHMTVYTASVTAPVNIATLKYWGKRDTKLNLPTNSSISVTLSQDDLRTLTSAATAPEFER 78 Query: 63 DRIWLNGREEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAA 122 D +WLNG + R Q CLR++R L RK S+D LP+ K+H+ S NNFPTAA Sbjct: 79 DTLWLNGEPHSIDNERTQNCLRDLRQL-RKEMESKDAS-LPTLSQWKLHIVSENNFPTAA 136 Query: 123 GLASSAAGYACLAYTLARVYGV---ESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGK 179 GLASSAAG+A L +A++Y + S++S +AR+GSGSACRSL+GG+V W+MG+ DG Sbjct: 137 GLASSAAGFAALVSAIAKLYQLPQSTSEISRIARKGSGSACRSLFGGYVAWEMGKAEDGH 196 Query: 180 DSIARQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAE 239 DS+A Q+A S WP+++ +LVVS KK ST GM+ +V TS L + R E VVP R Sbjct: 197 DSMAVQIADSSDWPQMKACVLVVSDIKKDVSSTQGMQLTVATSELFKERIEHVVPKRFEV 256 Query: 240 MARCIRERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTK 299 M + I E+DF +FA+ TM DSN FHATCLD+FPPI Y+N S RII H N +G+T Sbjct: 257 MRKAIVEKDFATFAKETMMDSNSFHATCLDSFPPIFYMNDTSKRIISWCHTINQFYGETI 316 Query: 300 VAYTFDAGPNAVIFTLDDTVAEFVAAVWHGFPPGSNGDTFLKGLQVRPAPLSAELQAALA 359 VAYTFDAGPNAV++ L + ++ A ++ F D Q+ E A Sbjct: 317 VAYTFDAGPNAVLYYLAENESKLFAFIYKLFGSVPGWDKKFTTEQLEAFNHQFESSNFTA 376 Query: 360 ME---PTPGGVKYIIVTQVGPGPQILDDPCAHLLGPDGLPK 397 E V +I+TQVG GPQ ++ + GLPK Sbjct: 377 RELDLELQKDVARVILTQVGSGPQETNESL--IDAKTGLPK 415 >2HKE-A nrPDB Length = 380 Score = 272 bits (695), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 139/325 (42%), Positives = 196/325 (60%), Gaps = 14/325 (4%) Query: 10 VTCTAPVNIAVIKYWGKRD--EELVLPINSSLSVTLHQDQLKTTTTAVISKDFTEDRIWL 67 VT AP+NIA IKYWGKR+ E L+LP N S S+TL ++ T+ + D D + L Sbjct: 6 VTVEAPINIAFIKYWGKREGGETLILPTNDSFSITLSASPFRSKTSVELRDDIETDTLRL 65 Query: 68 NGREEDVGQ-PRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAAGLAS 126 NG E DVG+ PR+Q+ L +R + ++ KV++ S NNFPTAAG+AS Sbjct: 66 NGTEVDVGKTPRVQSMLLHLRSTCPEELKNK-----------KVNIVSENNFPTAAGMAS 114 Query: 127 SAAGYACLAYTLARVYGVESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQV 186 SA+GY ++ L R + +++S +AR GSGSACRS +GGFV W GE+ DG D +A Q Sbjct: 115 SASGYCAMSAALIRAFKSTTNVSMLARLGSGSACRSAFGGFVIWNKGEKPDGSDCVATQF 174 Query: 187 APESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEMARCIRE 246 E+HWPE++V+ V+ +K ST GM+ S++TSPL++ R VP RM +R I+ Sbjct: 175 VDETHWPEIQVMCAVLKGAQKDVSSTKGMQQSLKTSPLMKKRISETVPERMKIASRAIKA 234 Query: 247 RDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKVAYTFDA 306 RDF +FA++ M +S+ C T P I+Y S+ +I LV +NA G T +AYTFDA Sbjct: 235 RDFATFAEIAMLESDDLQEICATTEPKITYATEDSYAMIRLVKAYNAKKGRTALAYTFDA 294 Query: 307 GPNAVIFTLDDTVAEFVAAVWHGFP 331 G N +F L + + E VA + FP Sbjct: 295 GANCFLFVLKEDLPEAVAMLMEHFP 319 >5GMD-A nrPDB Length = 325 Score = 207 bits (528), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 141/383 (36%), Positives = 191/383 (49%), Gaps = 69/383 (18%) Query: 7 LAAVTCTAPVNIAVIKYWGKR-DEELVLPINSSLSVTLHQDQLKTTTTAVISKD---FTE 62 L +VT +AP NIAV+KYWGKR DE L LP+N+SLS+TL DQL T ++ Sbjct: 2 LKSVTVSAPSNIAVVKYWGKRGDERLNLPLNNSLSITL-DDQLSVITKVTLNDKNIVIVN 60 Query: 63 DRIWLNGREEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAA 122 DRI ED + L + + K V V S + FP A Sbjct: 61 DRIL----SEDEMKEYAGRVLDTFKKIVGKE--------------FHVKVESKSKFPINA 102 Query: 123 GLASSAAGYACLAYTLARVYGV---ESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGK 179 GLASSAAG A LA++L + + +LS++AR GSGSACRS++GGFV W GE+ DG+ Sbjct: 103 GLASSAAGIAALAFSLNELLELNLKSEELSKIARLGSGSACRSMFGGFVVWNKGEREDGE 162 Query: 180 DSIARQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAE 239 DS Q+ +W EL +I ++S ++K S GM S ETS L+ R + + E Sbjct: 163 DSYCYQIFRHDYWSELVDIIPILSEKEKKISSRKGMIRSAETSELMECRLK-YIEKTFNE 221 Query: 240 MARCIRERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTK 299 + IR RD F L M+ SN HA LD++P YLN S RI+ +H + K Sbjct: 222 VIEAIRNRDEKKFYYLMMRHSNSMHAVILDSWPSFFYLNDTSIRIMEWIHDYG------K 275 Query: 300 VAYTFDAGPNAVIFTLDDTVAEFVAAVWHGFPPGSNGDTFLKGLQVRPAPLSAELQAALA 359 YTFDAGPN IFT + + + + FLK L+ Sbjct: 276 AGYTFDAGPNPHIFTTERNIGDILE--------------FLKSLE--------------- 306 Query: 360 MEPTPGGVKYIIVTQVGPGPQIL 382 +K IIV++VG GP++L Sbjct: 307 -------IKRIIVSKVGDGPKVL 322 >5V2M-A nrPDB Length = 334 Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 107/304 (35%), Positives = 161/304 (52%), Gaps = 25/304 (8%) Query: 14 APVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFTEDRIWLNGREED 73 A NIA+IKYWGK +EE +LP+NSSLS+TL D T TT ++ED LNG ++ Sbjct: 11 AHTNIALIKYWGKANEEYILPMNSSLSLTL--DAFYTETTVTFDAHYSEDVFILNGILQN 68 Query: 74 VGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAAGLASSAAGYAC 133 Q + ++E L R++ + + V S N PTAAGLASSA+G A Sbjct: 69 EKQTK---KVKEFLNLVRQQ----------ADCTWFAKVESQNFVPTAAGLASSASGLAA 115 Query: 134 LAYTLARVYGVE---SDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQVAPES 190 LA G+ DLS +ARRGSGSACRS++GGF +W G + S A + P + Sbjct: 116 LAGACNVALGLNLSAKDLSRLARRGSGSACRSIFGGFAQWNKGHSDE--TSFAENI-PAN 172 Query: 191 HWP-ELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEMARCIRERDF 249 +W EL +L ++++ +K S GM+ +VETS + ++ V ++++ I+ +DF Sbjct: 173 NWENELAMLFILINDGEKDVSSRDGMKRTVETSSFYQGWLDN-VEKDLSQVHEAIKTKDF 231 Query: 250 PSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKVAYTFDAGPN 309 P ++ + + H T L PP +Y + S + + LV + A +T DAGPN Sbjct: 232 PRLGEIIEANGLRMHGTTLGAVPPFTYWSPGSLQAMALVRQ--ARAKGIPCYFTMDAGPN 289 Query: 310 AVIF 313 + Sbjct: 290 VKVL 293 >3QT5-A nrPDB Length = 332 Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 104/304 (34%), Positives = 157/304 (51%), Gaps = 25/304 (8%) Query: 14 APVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFTEDRIWLNGREED 73 A NIA+IKYWGK DE ++P+N+SLSVTL D+ T T DFTED + LNG E + Sbjct: 14 AHTNIALIKYWGKADETYIIPMNNSLSVTL--DRFYTETKVTFDPDFTEDCLILNGNEVN 71 Query: 74 VGQP-RLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAAGLASSAAGYA 132 + ++Q + +R LA R ++R + S N PTAAGLASSA+ YA Sbjct: 72 AKEKEKIQNYMNIVRDLAGNRLHAR--------------IESENYVPTAAGLASSASAYA 117 Query: 133 CLAYTLARVYGV---ESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQVAPE 189 LA + ++DLS +ARRGSGSA RS++GGF EW+ G D S A + Sbjct: 118 ALAAACNEALSLNLSDTDLSRLARRGSGSASRSIFGGFAEWEKGH--DDLTSYAHGINSN 175 Query: 190 SHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEMARCIRERDF 249 +L ++ +V++ + K S GM + +TS ++ + V + E ++ +DF Sbjct: 176 GWEKDLSMIFVVINNQSKKVSSRSGMSLTRDTSRFYQYWLDH-VDEDLNEAKEAVKNQDF 234 Query: 250 PSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKVAYTFDAGPN 309 ++ + + HAT L PP +YL S+ + +V + + +T DAGPN Sbjct: 235 QRLGEVIEANGLRMHATNLGAQPPFTYLVQESYDAMAIVEQ--CRKANLPCYFTMDAGPN 292 Query: 310 AVIF 313 + Sbjct: 293 VKVL 296 >2HK2-A nrPDB Length = 331 Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 105/305 (34%), Positives = 158/305 (51%), Gaps = 27/305 (8%) Query: 14 APVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFTEDRIWLNGREED 73 A NIA+IKYWGK+DE L++P+N+S+SVTL ++ T T + T+D+ WLNG E Sbjct: 13 AHTNIALIKYWGKKDEALIIPMNNSISVTL--EKFYTETKVTFNDQLTQDQFWLNG--EK 68 Query: 74 VGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAAGLASSAAGYAC 133 V L+ + + + R R + + + S N PTAAGLASSA+ YA Sbjct: 69 VSGKELEKISKYMD-IVRNR----------AGIDWYAEIESDNFVPTAAGLASSASAYAA 117 Query: 134 LAYTLARVYGVE---SDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQVAPES 190 LA + ++ DLS +AR GSGSA RS+YGGF EW+ G D + V ES Sbjct: 118 LAAACNQALDMQLSDKDLSRLARIGSGSASRSIYGGFAEWEKGYS----DETSYAVPLES 173 Query: 191 HWPE--LRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEMARCIRERD 248 + E L ++ +V++ K S GM + TS ++ + + +AE I+++D Sbjct: 174 NHFEDDLAMIFVVINQHSKKVPSRYGMSLTRNTSRFYQYWLDH-IDEDLAEAKAAIQDKD 232 Query: 249 FPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKVAYTFDAGP 308 F ++ ++ + HAT L + PP +YL S+ ++ LVH +T DAGP Sbjct: 233 FKRLGEVIEENGLRMHATNLGSTPPFTYLVQESYDVMALVHE--CREAGYPCYFTMDAGP 290 Query: 309 NAVIF 313 N I Sbjct: 291 NVKIL 295 >3LTO-A nrPDB Length = 323 Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 92/321 (28%), Positives = 141/321 (43%), Gaps = 49/321 (15%) Query: 14 APVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFTEDRIW----LNG 69 AP NIA+IKY GK+DE LP NSSLS TL ++ + K T+ IW + G Sbjct: 7 APANIALIKYMGKKDENSNLPDNSSLSYTLSN----LLSSVKLEKLPTKKDIWEPLTIPG 62 Query: 70 REEDVGQPRLQACLREIRCLAR-KRRNSRDGDPLPSSLSCKVHVASVNNFPTAAGLA--- 125 E ++A R I L R K G L + S NNFP ++GLA Sbjct: 63 APE--FNLSVEAQKRFIDHLVRLKEYFGYVGGFL---------IQSSNNFPHSSGLASSA 111 Query: 126 ------SSAAGYACLAYTLARVYGVESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGK 179 + A A T + ++ ++++R GSGS+CRS Y + W G++ Sbjct: 112 SSFAALTKCASIALSELTQKPLPSIDEQ-AQLSRLGSGSSCRSFYAPWALW-TGDKVSAI 169 Query: 180 DSIARQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAE 239 D + + + ++V+S+++K S V + V+TSP R+E A + Sbjct: 170 DLPYKDLLHQ---------VIVISSQEKEIPSRVAHKL-VKTSPFYETRSER-AEANLKL 218 Query: 240 MARCIRERDFPSFAQL---TMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHG 296 + +D+ S Q+ D +Q TC P SY+ + I+ ++ +F G Sbjct: 219 LLNAFENKDWTSIYQICWHEFLDMHQLFKTCEK---PFSYITDNTLHILSVIEKFWNEKG 275 Query: 297 DTKVAYTFDAGPNAVIFTLDD 317 D V T DAGPN + D Sbjct: 276 DGPVV-TMDAGPNVHLLYRSD 295 >2GS8-A nrPDB Length = 317 Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 88/318 (27%), Positives = 154/318 (48%), Gaps = 35/318 (11%) Query: 10 VTCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFTEDRIWLNG 69 +T T+ NIA+IKYWGK ++ ++P SS+S+TL ++ TT+ + + T D+ ++NG Sbjct: 9 ITVTSYANIAIIKYWGKENQAKMIPSTSSISLTL-ENMFTTTSVSFLPDTATSDQFYING 67 Query: 70 -REEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAAGLASSA 128 + D ++ A + + R + G V + + NN PTAAGL+SS+ Sbjct: 68 ILQNDEEHTKISAIIDQFR---------QPGQAF-------VKMETQNNMPTAAGLSSSS 111 Query: 129 AGYACLAYTLARVYGVESD---LSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQ 185 +G + L +++ + D L++ A+ SGS+ RS +G W KDS A Sbjct: 112 SGLSALVKACDQLFDTQLDQKALAQKAKFASGSSSRSFFGPVAAW-------DKDSGA-- 162 Query: 186 VAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLL-RFRAESVVPARMAEMARCI 244 + ++ +++LV++A KK S GM+ +TS ++ +S + + M + Sbjct: 163 IYKVETDLKMAMIMLVLNAAKKPISSREGMKLCRDTSTTFDQWVEQSAIDYQ--HMLTYL 220 Query: 245 RERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKVAYTF 304 + +F QLT ++ HAT PP SYL S++ + V +T Sbjct: 221 KTNNFEKVGQLTEANALAMHATTKTANPPFSYLTKESYQAMEAVKEL--RQEGFACYFTM 278 Query: 305 DAGPNAVIFTLDDTVAEF 322 DAGPN + L+ +A+ Sbjct: 279 DAGPNVKVLCLEKDLAQL 296 >5MTZ-A nrPDB Length = 874 Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust. Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 12/123 (9%) Query: 199 ILVVSAEKKLTGSTVGMRASVETSPLLRFRA-----ESVVPARMAEMARCIRERDFPSFA 253 I +S E + S V M+ ++ PL F + R E+ R RD Sbjct: 631 IKYISCEHFINDSFVRMQT--QSVPLAEFNEILKENSNQESNRKLELDRDSSYRDVDLIR 688 Query: 254 QLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKVAYTFDAGPNAVIF 313 Q+ S ++ TC +Y N+I++R+ N H KV+Y+ D PN F Sbjct: 689 QMYEDLSIEYFQTCRAIHCDWAYSNSITFRMDE-----NNEHNTFKVSYSGDTRPNIEKF 743 Query: 314 TLD 316 +L+ Sbjct: 744 SLE 746 >3BFJ-A nrPDB Length = 387 Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust. Identities = 37/178 (20%), Positives = 66/178 (37%), Gaps = 28/178 (15%) Query: 96 SRDGDPLPSSLSCKVHVASVNNFPTAAGLASSAAGYACLAYTLARVYGVESDLSEVARRG 155 S+D +P+ + + + N A L S+ +AY A Sbjct: 209 SKDANPVTDAAAMQAIRLIARNLRQAVALGSNLQAREYMAY---------------ASLL 253 Query: 156 SGSACRSLYGGFVEWQMGEQADGKDSIARQVAPESHWPELRVLILVVSAEK--------- 206 +G A + G+V M Q G + VA P + L+ + EK Sbjct: 254 AGMAFNNANLGYVH-AMAHQLGGLYDMPHGVANAVLLPHVARYNLIANPEKFADIAELMG 312 Query: 207 -KLTGSTVGMRASVETSPLLRFRAESVVPARMAEMARCIRERDFPSFAQLTMKDSNQF 263 +TG + A + + R + +P + ++ ++E DFP A++ +KD N F Sbjct: 313 ENITGLSTLDAAEKAIAAITRLSMDIGIPQHLRDLG--VKETDFPYMAEMALKDGNAF 368 >2QA1-A nrPDB Length = 500 Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 340 LKGLQVRPAPLSAELQAALAM-EPTPGGVKYIIVTQVGPGPQILDDP 385 +KG++++P + L + M P PGG+ IIV + G PQ + P Sbjct: 189 IKGVELQPRMIGETLPGGMVMVGPLPGGITRIIVCERGTPPQRRETP 235 >3SLC-A nrPDB Length = 415 Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 21/103 (20%) Query: 201 VVSAEKKLTGSTV-------GMRASVETSPLLRFRAESVVPARMAEMARCIRERDFPSFA 253 +V +K T S V G++ S +PL PA + +A ++ SF Sbjct: 107 IVHGGEKYTSSVVIDESVIQGIKDSASFAPLHN-------PAHLIGIAEALK-----SFP 154 Query: 254 QLTMKDSNQFHATCLDTFPPISYLNAISWRII--HLVHRFNAH 294 QL K+ F T P SYL A+ + + H V R+ AH Sbjct: 155 QLKDKNVAVFDTAFHQTMPEESYLYALPYSLYKEHGVRRYGAH 197 >3PZL-A nrPDB Length = 313 Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust. Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%) Query: 109 KVHVASVNNFPTAAGLASSAAGYACLAYTLARVYGVESDLSEVARRGSGSACRSLYGGFV 168 K H + + + + +A + GY Y V+G+ D + RRGS A S+ G +V Sbjct: 10 KDHASELRSIFSLKKIADAVNGYEEAKYV---VFGIPFDNTSSYRRGSKYAPDSIRGAYV 66 Query: 169 EWQMGEQADGKDSIARQVA 187 + E + G D +A +A Sbjct: 67 NLESYEYSYGIDLLASGMA 85 >2OBL-A nrPDB Length = 347 Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust. Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 8/103 (7%) Query: 177 DGKDSIARQVAPESHWPEL-------RVLILVVSAEKKLTGSTVGMRASVETSPLLRFRA 229 DG + R++A E+H+P + RV+ VV++E + + +P L R Sbjct: 241 DGHIVLTRELAEENHFPAIDIGLSASRVMHNVVTSEHLRAAAECKKLIATYKNPELLIRI 300 Query: 230 ESVVPARMAEMARCIRERDF-PSFAQLTMKDSNQFHATCLDTF 271 + E + I+ R +F Q + KD + + T F Sbjct: 301 GEYTMGQDPEADKAIKNRKLIQNFIQQSTKDISSYEKTIESLF 343 >4P52-A nrPDB Length = 331 Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 12/71 (16%) Query: 110 VHVASVNNFPTAAGLASSAAGYACLAYTLARVYGVE---SDLSEVARRGSGSACRS---- 162 + + P +GL SSAA Y + ++ G + DL A G AC S Sbjct: 104 IEIELTKKMPLGSGLGSSAASTVAGVYAINQLLGNKMEVKDLLPFAMEGEFLACGSAHAD 163 Query: 163 -----LYGGFV 168 LYGGFV Sbjct: 164 NVAPCLYGGFV 174 >2Z6H-A nrPDB Length = 644 Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 19/143 (13%) Query: 73 DVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAAGLASSAAGYA 132 D Q +Q CL +R L+ + L +L + +N AAG+ S+ Sbjct: 235 DPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSN---LT 291 Query: 133 CLAY----TLARVYGVESDLSEVARRGSGS--------ACRSLYGGFVEWQMGEQA---- 176 C Y + +V G+E+ + V R G A R L E +M + A Sbjct: 292 CNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLH 351 Query: 177 DGKDSIARQVAPESHWPELRVLI 199 G + + + P SHWP ++ + Sbjct: 352 YGLPVVVKLLHPPSHWPLIKATV 374 >2GL7-A nrPDB Length = 550 Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust. Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 19/140 (13%) Query: 73 DVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAAGLASSAAGYA 132 D Q +Q CL +R L+ + L +L + +N AAG+ S+ Sbjct: 236 DPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSN---LT 292 Query: 133 CLAY----TLARVYGVESDLSEVARRGSGS--------ACRSLYGGFVEWQMGEQA---- 176 C Y + +V G+E+ + V R G A R L E +M + A Sbjct: 293 CNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLH 352 Query: 177 DGKDSIARQVAPESHWPELR 196 G + + + P SHWP ++ Sbjct: 353 YGLPVVVKLLHPPSHWPLIK 372 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3D4J-A nrPDB 617 e-177 3F0N-A nrPDB 571 e-163 1FI4-A nrPDB 492 e-139 2HKE-A nrPDB 401 e-112 5GMD-A nrPDB 371 e-103 3QT5-A nrPDB 351 3e-97 5V2M-A nrPDB 343 7e-95 2HK2-A nrPDB 341 2e-94 3LTO-A nrPDB 276 1e-74 2GS8-A nrPDB 272 3e-73 Sequences not found previously or not previously below threshold: 4RKP-A nrPDB 59 4e-09 4HAC-B nrPDB 43 2e-04 5WAT-A nrPDB 39 0.003 4P52-A nrPDB 38 0.006 2AJ4-A nrPDB 35 0.073 1KKH-A nrPDB 32 0.39 2QJ0-A nrPDB 31 0.81 2QA1-A nrPDB 31 1.0 5WAS-A nrPDB 31 1.0 3EZ1-A nrPDB 31 1.2 5XLU-A nrPDB 31 1.3 3JC6-4 nrPDB 30 1.5 4Y23-A nrPDB 30 1.5 3PZL-A nrPDB 30 1.7 3WY0-A nrPDB 29 2.5 6BGI-A nrPDB 29 2.8 1ZAW-A nrPDB 29 4.4 >3D4J-A nrPDB Length = 400 Score = 617 bits (1590), Expect = e-177, Method: Composition-based stats. Identities = 400/400 (100%), Positives = 400/400 (100%) Query: 1 MASEKPLAAVTCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDF 60 MASEKPLAAVTCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDF Sbjct: 1 MASEKPLAAVTCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDF 60 Query: 61 TEDRIWLNGREEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPT 120 TEDRIWLNGREEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPT Sbjct: 61 TEDRIWLNGREEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPT 120 Query: 121 AAGLASSAAGYACLAYTLARVYGVESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKD 180 AAGLASSAAGYACLAYTLARVYGVESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKD Sbjct: 121 AAGLASSAAGYACLAYTLARVYGVESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKD 180 Query: 181 SIARQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEM 240 SIARQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEM Sbjct: 181 SIARQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEM 240 Query: 241 ARCIRERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKV 300 ARCIRERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKV Sbjct: 241 ARCIRERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKV 300 Query: 301 AYTFDAGPNAVIFTLDDTVAEFVAAVWHGFPPGSNGDTFLKGLQVRPAPLSAELQAALAM 360 AYTFDAGPNAVIFTLDDTVAEFVAAVWHGFPPGSNGDTFLKGLQVRPAPLSAELQAALAM Sbjct: 301 AYTFDAGPNAVIFTLDDTVAEFVAAVWHGFPPGSNGDTFLKGLQVRPAPLSAELQAALAM 360 Query: 361 EPTPGGVKYIIVTQVGPGPQILDDPCAHLLGPDGLPKPAA 400 EPTPGGVKYIIVTQVGPGPQILDDPCAHLLGPDGLPKPAA Sbjct: 361 EPTPGGVKYIIVTQVGPGPQILDDPCAHLLGPDGLPKPAA 400 >3F0N-A nrPDB Length = 414 Score = 571 bits (1470), Expect = e-163, Method: Composition-based stats. Identities = 330/388 (85%), Positives = 350/388 (90%) Query: 10 VTCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFTEDRIWLNG 69 VTCTAPVNIAVIKYWGKRDE L+LPINSSLSVTLHQDQLKTTTT ISKDFTEDRIWLNG Sbjct: 24 VTCTAPVNIAVIKYWGKRDEALILPINSSLSVTLHQDQLKTTTTVAISKDFTEDRIWLNG 83 Query: 70 REEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAAGLASSAA 129 REEDVGQPRLQACLREIR LARKRR++ DGD LP SLS KVHVASVNNFPTAAGLASSAA Sbjct: 84 REEDVGQPRLQACLREIRRLARKRRSTEDGDTLPLSLSYKVHVASVNNFPTAAGLASSAA 143 Query: 130 GYACLAYTLARVYGVESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQVAPE 189 GYACLAYTLA+VYGVE DLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQ+APE Sbjct: 144 GYACLAYTLAQVYGVEGDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQIAPE 203 Query: 190 SHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEMARCIRERDF 249 HWP+LR+LILVVSA+KK TGSTVGM+ SVETS LL+FRAESVVP RM EM RCI+E+DF Sbjct: 204 WHWPQLRILILVVSADKKQTGSTVGMQTSVETSTLLKFRAESVVPERMKEMTRCIQEQDF 263 Query: 250 PSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKVAYTFDAGPN 309 FAQLTMKDSNQFHATCLDTFPPISYLN S RII LVHRFN HHG TKVAYTFDAGPN Sbjct: 264 QGFAQLTMKDSNQFHATCLDTFPPISYLNDTSRRIIQLVHRFNTHHGQTKVAYTFDAGPN 323 Query: 310 AVIFTLDDTVAEFVAAVWHGFPPGSNGDTFLKGLQVRPAPLSAELQAALAMEPTPGGVKY 369 AVIFTL+DTVAEFVAAV H FPP +NGD FLKGLQV P LS EL+AAL +EP+PGGV+Y Sbjct: 324 AVIFTLEDTVAEFVAAVRHSFPPAANGDKFLKGLQVAPVLLSDELKAALVVEPSPGGVQY 383 Query: 370 IIVTQVGPGPQILDDPCAHLLGPDGLPK 397 II TQVGPGPQ+LDD HLLG DGLP+ Sbjct: 384 IIATQVGPGPQVLDDTHDHLLGQDGLPQ 411 >1FI4-A nrPDB Length = 416 Score = 492 bits (1265), Expect = e-139, Method: Composition-based stats. Identities = 187/402 (46%), Positives = 247/402 (61%), Gaps = 10/402 (2%) Query: 2 ASEKPLAAVTCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFT 61 S + + TAPVNIA +KYWGKRD +L LP NSS+SVTL QD L+T T+A + +F Sbjct: 18 GSHMTVYTASVTAPVNIATLKYWGKRDTKLNLPTNSSISVTLSQDDLRTLTSAATAPEFE 77 Query: 62 EDRIWLNGREEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTA 121 D +WLNG + R Q CLR++R L RK S+D LP+ K+H+ S NNFPTA Sbjct: 78 RDTLWLNGEPHSIDNERTQNCLRDLRQL-RKEMESKDAS-LPTLSQWKLHIVSENNFPTA 135 Query: 122 AGLASSAAGYACLAYTLARVYGV---ESDLSEVARRGSGSACRSLYGGFVEWQMGEQADG 178 AGLASSAAG+A L +A++Y + S++S +AR+GSGSACRSL+GG+V W+MG+ DG Sbjct: 136 AGLASSAAGFAALVSAIAKLYQLPQSTSEISRIARKGSGSACRSLFGGYVAWEMGKAEDG 195 Query: 179 KDSIARQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMA 238 DS+A Q+A S WP+++ +LVVS KK ST GM+ +V TS L + R E VVP R Sbjct: 196 HDSMAVQIADSSDWPQMKACVLVVSDIKKDVSSTQGMQLTVATSELFKERIEHVVPKRFE 255 Query: 239 EMARCIRERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDT 298 M + I E+DF +FA+ TM DSN FHATCLD+FPPI Y+N S RII H N +G+T Sbjct: 256 VMRKAIVEKDFATFAKETMMDSNSFHATCLDSFPPIFYMNDTSKRIISWCHTINQFYGET 315 Query: 299 KVAYTFDAGPNAVIFTLDDTVAEFVAAVWHGFPPGSNGDTFLKGLQVRPAPLSAELQAAL 358 VAYTFDAGPNAV++ L + ++ A ++ F D Q+ E Sbjct: 316 IVAYTFDAGPNAVLYYLAENESKLFAFIYKLFGSVPGWDKKFTTEQLEAFNHQFESSNFT 375 Query: 359 AME---PTPGGVKYIIVTQVGPGPQILDDPCAHLLGPDGLPK 397 A E V +I+TQVG GPQ ++ + GLPK Sbjct: 376 ARELDLELQKDVARVILTQVGSGPQETNESL--IDAKTGLPK 415 >2HKE-A nrPDB Length = 380 Score = 401 bits (1030), Expect = e-112, Method: Composition-based stats. Identities = 149/384 (38%), Positives = 216/384 (56%), Gaps = 23/384 (5%) Query: 10 VTCTAPVNIAVIKYWGKRD--EELVLPINSSLSVTLHQDQLKTTTTAVISKDFTEDRIWL 67 VT AP+NIA IKYWGKR+ E L+LP N S S+TL ++ T+ + D D + L Sbjct: 6 VTVEAPINIAFIKYWGKREGGETLILPTNDSFSITLSASPFRSKTSVELRDDIETDTLRL 65 Query: 68 NGREEDVGQ-PRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAAGLAS 126 NG E DVG+ PR+Q+ L +R + ++ KV++ S NNFPTAAG+AS Sbjct: 66 NGTEVDVGKTPRVQSMLLHLRSTCPEELKNK-----------KVNIVSENNFPTAAGMAS 114 Query: 127 SAAGYACLAYTLARVYGVESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQV 186 SA+GY ++ L R + +++S +AR GSGSACRS +GGFV W GE+ DG D +A Q Sbjct: 115 SASGYCAMSAALIRAFKSTTNVSMLARLGSGSACRSAFGGFVIWNKGEKPDGSDCVATQF 174 Query: 187 APESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEMARCIRE 246 E+HWPE++V+ V+ +K ST GM+ S++TSPL++ R VP RM +R I+ Sbjct: 175 VDETHWPEIQVMCAVLKGAQKDVSSTKGMQQSLKTSPLMKKRISETVPERMKIASRAIKA 234 Query: 247 RDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKVAYTFDA 306 RDF +FA++ M +S+ C T P I+Y S+ +I LV +NA G T +AYTFDA Sbjct: 235 RDFATFAEIAMLESDDLQEICATTEPKITYATEDSYAMIRLVKAYNAKKGRTALAYTFDA 294 Query: 307 GPNAVIFTLDDTVAEFVAAVWHGFPPGSNGDTFLKG-----LQVRPAPLSAELQAALAME 361 G N +F L + + E VA + FP + F G +V+ L E + + Sbjct: 295 GANCFLFVLKEDLPEAVAMLMEHFPTP--FEKFFFGDRELLEKVKVVSLPDEYKKLIDHP 352 Query: 362 PTPGGVKYIIVTQVGPGPQILDDP 385 P + ++ + VG G + L Sbjct: 353 KKPFEM--LLQSPVGCGVKYLGPS 374 >5GMD-A nrPDB Length = 325 Score = 371 bits (952), Expect = e-103, Method: Composition-based stats. Identities = 141/384 (36%), Positives = 191/384 (49%), Gaps = 69/384 (17%) Query: 7 LAAVTCTAPVNIAVIKYWGKR-DEELVLPINSSLSVTLHQDQLKTTTTAVISKD---FTE 62 L +VT +AP NIAV+KYWGKR DE L LP+N+SLS+TL DQL T ++ Sbjct: 2 LKSVTVSAPSNIAVVKYWGKRGDERLNLPLNNSLSITL-DDQLSVITKVTLNDKNIVIVN 60 Query: 63 DRIWLNGREEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAA 122 DRI ED + L + + K V V S + FP A Sbjct: 61 DRI----LSEDEMKEYAGRVLDTFKKIVGKE--------------FHVKVESKSKFPINA 102 Query: 123 GLASSAAGYACLAYTLARVYGV---ESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGK 179 GLASSAAG A LA++L + + +LS++AR GSGSACRS++GGFV W GE+ DG+ Sbjct: 103 GLASSAAGIAALAFSLNELLELNLKSEELSKIARLGSGSACRSMFGGFVVWNKGEREDGE 162 Query: 180 DSIARQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAE 239 DS Q+ +W EL +I ++S ++K S GM S ETS L+ R + + E Sbjct: 163 DSYCYQIFRHDYWSELVDIIPILSEKEKKISSRKGMIRSAETSELMECRLK-YIEKTFNE 221 Query: 240 MARCIRERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTK 299 + IR RD F L M+ SN HA LD++P YLN S RI+ +H + K Sbjct: 222 VIEAIRNRDEKKFYYLMMRHSNSMHAVILDSWPSFFYLNDTSIRIMEWIHDYG------K 275 Query: 300 VAYTFDAGPNAVIFTLDDTVAEFVAAVWHGFPPGSNGDTFLKGLQVRPAPLSAELQAALA 359 YTFDAGPN IFT + + + + FLK L+ Sbjct: 276 AGYTFDAGPNPHIFTTERNIGDILE--------------FLKSLE--------------- 306 Query: 360 MEPTPGGVKYIIVTQVGPGPQILD 383 +K IIV++VG GP++L Sbjct: 307 -------IKRIIVSKVGDGPKVLS 323 >3QT5-A nrPDB Length = 332 Score = 351 bits (900), Expect = 3e-97, Method: Composition-based stats. Identities = 105/328 (32%), Positives = 161/328 (49%), Gaps = 25/328 (7%) Query: 7 LAAVTCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFTEDRIW 66 + + A NIA+IKYWGK DE ++P+N+SLSVTL D+ T T DFTED + Sbjct: 7 VKSGKARAHTNIALIKYWGKADETYIIPMNNSLSVTL--DRFYTETKVTFDPDFTEDCLI 64 Query: 67 LNGREEDVG-QPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAAGLA 125 LNG E + + ++Q + +R LA R ++R + S N PTAAGLA Sbjct: 65 LNGNEVNAKEKEKIQNYMNIVRDLAGNRLHAR--------------IESENYVPTAAGLA 110 Query: 126 SSAAGYACLAYTLARVYGV---ESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSI 182 SSA+ YA LA + ++DLS +ARRGSGSA RS++GGF EW+ G D S Sbjct: 111 SSASAYAALAAACNEALSLNLSDTDLSRLARRGSGSASRSIFGGFAEWEKGH--DDLTSY 168 Query: 183 ARQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEMAR 242 A + +L ++ +V++ + K S GM + +TS ++ + V + E Sbjct: 169 AHGINSNGWEKDLSMIFVVINNQSKKVSSRSGMSLTRDTSRFYQYWLDH-VDEDLNEAKE 227 Query: 243 CIRERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKVAY 302 ++ +DF ++ + + HAT L PP +YL S+ + +V + + + Sbjct: 228 AVKNQDFQRLGEVIEANGLRMHATNLGAQPPFTYLVQESYDAMAIVEQ--CRKANLPCYF 285 Query: 303 TFDAGPNAVIFTLDDTVAEFVAAVWHGF 330 T DAGPN + + F Sbjct: 286 TMDAGPNVKVLVEKKNKQAVMEQFLKVF 313 >5V2M-A nrPDB Length = 334 Score = 343 bits (880), Expect = 7e-95, Method: Composition-based stats. Identities = 106/320 (33%), Positives = 161/320 (50%), Gaps = 23/320 (7%) Query: 14 APVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFTEDRIWLNGREED 73 A NIA+IKYWGK +EE +LP+NSSLS+TL D T TT ++ED LNG ++ Sbjct: 11 AHTNIALIKYWGKANEEYILPMNSSLSLTL--DAFYTETTVTFDAHYSEDVFILNGILQN 68 Query: 74 VGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAAGLASSAAGYAC 133 Q + ++E L R++ + + V S N PTAAGLASSA+G A Sbjct: 69 EKQTK---KVKEFLNLVRQQ----------ADCTWFAKVESQNFVPTAAGLASSASGLAA 115 Query: 134 LAYTLARVYGVE---SDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQVAPES 190 LA G+ DLS +ARRGSGSACRS++GGF +W G + S A + + Sbjct: 116 LAGACNVALGLNLSAKDLSRLARRGSGSACRSIFGGFAQWNKGHS--DETSFAENIPANN 173 Query: 191 HWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEMARCIRERDFP 250 EL +L ++++ +K S GM+ +VETS + ++ V ++++ I+ +DFP Sbjct: 174 WENELAMLFILINDGEKDVSSRDGMKRTVETSSFYQGWLDN-VEKDLSQVHEAIKTKDFP 232 Query: 251 SFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKVAYTFDAGPNA 310 ++ + + H T L PP +Y + S + + LV + A +T DAGPN Sbjct: 233 RLGEIIEANGLRMHGTTLGAVPPFTYWSPGSLQAMALVRQ--ARAKGIPCYFTMDAGPNV 290 Query: 311 VIFTLDDTVAEFVAAVWHGF 330 + + + F Sbjct: 291 KVLVEKKNLEALKTFLSEHF 310 >2HK2-A nrPDB Length = 331 Score = 341 bits (875), Expect = 2e-94, Method: Composition-based stats. Identities = 103/327 (31%), Positives = 162/327 (49%), Gaps = 23/327 (7%) Query: 7 LAAVTCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFTEDRIW 66 + + A NIA+IKYWGK+DE L++P+N+S+SVTL ++ T T + T+D+ W Sbjct: 6 IKSGKARAHTNIALIKYWGKKDEALIIPMNNSISVTL--EKFYTETKVTFNDQLTQDQFW 63 Query: 67 LNGREEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAAGLAS 126 LNG E V L+ + + + R R + + + S N PTAAGLAS Sbjct: 64 LNG--EKVSGKELEKISKYMD-IVRNR----------AGIDWYAEIESDNFVPTAAGLAS 110 Query: 127 SAAGYACLAYTLARVYGV---ESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIA 183 SA+ YA LA + + + DLS +AR GSGSA RS+YGGF EW+ G + S A Sbjct: 111 SASAYAALAAACNQALDMQLSDKDLSRLARIGSGSASRSIYGGFAEWEKGYS--DETSYA 168 Query: 184 RQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEMARC 243 + +L ++ +V++ K S GM + TS ++ + + +AE Sbjct: 169 VPLESNHFEDDLAMIFVVINQHSKKVPSRYGMSLTRNTSRFYQYWLDH-IDEDLAEAKAA 227 Query: 244 IRERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKVAYT 303 I+++DF ++ ++ + HAT L + PP +YL S+ ++ LVH +T Sbjct: 228 IQDKDFKRLGEVIEENGLRMHATNLGSTPPFTYLVQESYDVMALVHE--CREAGYPCYFT 285 Query: 304 FDAGPNAVIFTLDDTVAEFVAAVWHGF 330 DAGPN I + + + F Sbjct: 286 MDAGPNVKILVEKKNKQQIIDKLLTQF 312 >3LTO-A nrPDB Length = 323 Score = 276 bits (705), Expect = 1e-74, Method: Composition-based stats. Identities = 92/321 (28%), Positives = 141/321 (43%), Gaps = 49/321 (15%) Query: 14 APVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFTEDRIW----LNG 69 AP NIA+IKY GK+DE LP NSSLS TL ++ + K T+ IW + G Sbjct: 7 APANIALIKYMGKKDENSNLPDNSSLSYTLSN----LLSSVKLEKLPTKKDIWEPLTIPG 62 Query: 70 REEDVGQPRLQACLREIRCLAR-KRRNSRDGDPLPSSLSCKVHVASVNNFPTAAGLA--- 125 E ++A R I L R K G L + S NNFP ++GLA Sbjct: 63 APE--FNLSVEAQKRFIDHLVRLKEYFGYVGGFL---------IQSSNNFPHSSGLASSA 111 Query: 126 ------SSAAGYACLAYTLARVYGVESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGK 179 + A A T + ++ ++++R GSGS+CRS Y + W G++ Sbjct: 112 SSFAALTKCASIALSELTQKPLPSIDEQ-AQLSRLGSGSSCRSFYAPWALW-TGDKVSAI 169 Query: 180 DSIARQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAE 239 D + + + ++V+S+++K S V + V+TSP R+E A + Sbjct: 170 DLPYKDLLHQ---------VIVISSQEKEIPSRVAHKL-VKTSPFYETRSERA-EANLKL 218 Query: 240 MARCIRERDFPSFAQL---TMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHG 296 + +D+ S Q+ D +Q TC P SY+ + I+ ++ +F G Sbjct: 219 LLNAFENKDWTSIYQICWHEFLDMHQLFKTCEK---PFSYITDNTLHILSVIEKFWNEKG 275 Query: 297 DTKVAYTFDAGPNAVIFTLDD 317 D V T DAGPN + D Sbjct: 276 DGPVV-TMDAGPNVHLLYRSD 295 >2GS8-A nrPDB Length = 317 Score = 272 bits (694), Expect = 3e-73, Method: Composition-based stats. Identities = 88/326 (26%), Positives = 156/326 (47%), Gaps = 35/326 (10%) Query: 10 VTCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQDQLKTTTTAVISKDFTEDRIWLNG 69 +T T+ NIA+IKYWGK ++ ++P SS+S+TL ++ TT+ + + T D+ ++NG Sbjct: 9 ITVTSYANIAIIKYWGKENQAKMIPSTSSISLTL-ENMFTTTSVSFLPDTATSDQFYING 67 Query: 70 -REEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAAGLASSA 128 + D ++ A + + R + G V + + NN PTAAGL+SS+ Sbjct: 68 ILQNDEEHTKISAIIDQFR---------QPGQAF-------VKMETQNNMPTAAGLSSSS 111 Query: 129 AGYACLAYTLARVYGVESD---LSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQ 185 +G + L +++ + D L++ A+ SGS+ RS +G W KDS A Sbjct: 112 SGLSALVKACDQLFDTQLDQKALAQKAKFASGSSSRSFFGPVAAW-------DKDSGA-- 162 Query: 186 VAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLL-RFRAESVVPARMAEMARCI 244 + ++ +++LV++A KK S GM+ +TS ++ +S + + M + Sbjct: 163 IYKVETDLKMAMIMLVLNAAKKPISSREGMKLCRDTSTTFDQWVEQSAIDYQ--HMLTYL 220 Query: 245 RERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKVAYTF 304 + +F QLT ++ HAT PP SYL S++ + V +T Sbjct: 221 KTNNFEKVGQLTEANALAMHATTKTANPPFSYLTKESYQAMEAVKEL--RQEGFACYFTM 278 Query: 305 DAGPNAVIFTLDDTVAEFVAAVWHGF 330 DAGPN + L+ +A+ + + Sbjct: 279 DAGPNVKVLCLEKDLAQLAERLGKNY 304 >4RKP-A nrPDB Length = 337 Score = 58.7 bits (140), Expect = 4e-09, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 103/324 (31%), Gaps = 34/324 (10%) Query: 5 KPLAAVTCTAPVNIAVIKYWGKRDEELVLPINSSLSVTLHQD--QLKTTTTAVISKDFTE 62 ++ TA I V+ G + P+++S + +++ T + + T Sbjct: 20 MTYRSIGSTAYPTIGVVLLGGIANPVTRTPLHTSAGIAYSDSCGSIRSETRI-YADEATH 78 Query: 63 DRIWLNGREEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNFPTAA 122 I+ NG E ++ L + + ++ S NF + Sbjct: 79 --IYFNGTESTDDNRSVRRVLDRYSSVFEEAFGTKTVSY------------SSQNFGILS 124 Query: 123 GLASSAAGYACLAYTLARVYGVE-SDLSEVARRGSGSACRSLYGGFVE-WQMGEQADGKD 180 G +S A + A L ++ D+ R S SA RSL+GG W DG Sbjct: 125 G-SSDAGAASIGAAILGLKPDLDPHDVENDLRAVSESAGRSLFGGLTITWS-----DGFH 178 Query: 181 SIARQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESVVPARMAEM 240 + ++ + ++ ++ S V + V S L R + + Sbjct: 179 AYTEKILDPEAFSGYSIVAFAFDYQRN--PSDVIHQNIVR-SDLYPARKKHA-DEHAHMI 234 Query: 241 ARCIRERDFPSFAQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKV 300 + D L +D+ ++H+ +N I + L+ D Sbjct: 235 KEYAKTNDIKGIFDLAQEDTEEYHSILRGVG-----VNVIRENMQKLISYLKLIRKDYWN 289 Query: 301 AYTFDAGPNAVIFTLDDTVAEFVA 324 AY G N + + + Sbjct: 290 AYIVTGGSNVYVAVESENADRLFS 313 >4HAC-B nrPDB Length = 321 Score = 43.3 bits (100), Expect = 2e-04, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 48/148 (32%), Gaps = 27/148 (18%) Query: 47 QLKTTTTAVISKDFTEDRIWLNGREEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSL 106 +L+T A ++ T + P + A + ++R Sbjct: 50 ELRTRVRAELNDSITIQSQIGRTGLDFEKHPYVSAVIEKMRKSIP--------------- 94 Query: 107 SCKVHVASVNNFPTAAGLASSAAGYACLAYTLARVYGVESDLSEVARRG-------SGSA 159 V + ++ P +GL SSAA L ++G L E+A+ G G+A Sbjct: 95 INGVFLTVDSDIPVGSGLGSSAAVTIASIGALNELFGFGLSLQEIAKLGHEIEIKVQGAA 154 Query: 160 CR-----SLYGGFVEWQMGEQADGKDSI 182 S +GG V + D Sbjct: 155 SPTDTYVSTFGGVVTIPERRKLKTPDCG 182 >5WAT-A nrPDB Length = 315 Score = 39.1 bits (89), Expect = 0.003, Method: Composition-based stats. Identities = 51/278 (18%), Positives = 79/278 (28%), Gaps = 32/278 (11%) Query: 59 DFTEDRIWLNGREEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNF 118 D E I +G E +V + L K R G + + V NN Sbjct: 37 DTVEVEIIPSGLEVEVFGEGQGEVPLDGSHLVVKAI--RAGLKAADAEVPGLRVVCHNNI 94 Query: 119 PTAAGLASSAAGYACLAYTLARVYGVESDLSEVARRGSG------SACRSLYGGFVEWQM 172 P + GL SSAA + ++ + S +A S+ GG V Sbjct: 95 PQSRGLGSSAAAAVAGVAAANGLADFPLTQEQIVQLSSAFEGHPDNAAASVLGGAVVSWT 154 Query: 173 GEQADGKDSIARQVAPESHWPELRVLILVVSAEKKLTGSTVGMRASVETSPLLRFRAESV 232 DGK P +R LV + ST +R + T Sbjct: 155 NLSIDGKSQPQYAAVPLEVQDNIRATALVPNFH----ASTEAVRRVLPTEVTH------- 203 Query: 233 VPARMAEMARCIRERDFPSFAQLT-MKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRF 291 + AR + L ++ H PI+ V+R Sbjct: 204 IDARFNVSRVAVMIVALQQRPDLLWEGTRDRLHQPYRAEVLPIT---------SEWVNRL 254 Query: 292 NAHHGDTKVAYTFDAGPNAVIFTLDDTVAEFVAAVWHG 329 AY AGP A++ + + + + Sbjct: 255 RNR---GYAAYLSGAGPTAMVLSTEPIPDKVLEDARES 289 >4P52-A nrPDB Length = 331 Score = 38.3 bits (87), Expect = 0.006, Method: Composition-based stats. Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 12/72 (16%) Query: 110 VHVASVNNFPTAAGLASSAAGYACLAYTLARVYGVE---SDLSEVARRGSGSACRS---- 162 + + P +GL SSAA Y + ++ G + DL A G AC S Sbjct: 104 IEIELTKKMPLGSGLGSSAASTVAGVYAINQLLGNKMEVKDLLPFAMEGEFLACGSAHAD 163 Query: 163 -----LYGGFVE 169 LYGGFV Sbjct: 164 NVAPCLYGGFVL 175 >2AJ4-A nrPDB Length = 548 Score = 34.8 bits (78), Expect = 0.073, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 38/107 (35%), Gaps = 6/107 (5%) Query: 40 SVTLHQDQLKTTTTAVISKDFTEDRIWLN--GREEDVGQPRLQACLREIR---CLARKRR 94 +V + ++ + T F + + L G + P + + +A Sbjct: 100 AVKVLNEKNPSITLINADPKFAQRKFDLPLDGSYVTID-PSVSDWSNYFKCGLHVAHSFL 158 Query: 95 NSRDGDPLPSSLSCKVHVASVNNFPTAAGLASSAAGYACLAYTLARV 141 + S+ + V + PT +GL+SSAA +A + + Sbjct: 159 KKLAPERFASAPLAGLQVFCEGDVPTGSGLSSSAAFICAVALAVVKA 205 >1KKH-A nrPDB Length = 317 Score = 32.1 bits (71), Expect = 0.39, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 16/116 (13%) Query: 51 TTTAVISKDFTEDRIWLNGREEDVGQPRLQACLREIRCLARKRR-----------NSRDG 99 T+ + K+ ED I LN + L L EI+ + N+ D Sbjct: 35 LTSTIEIKETQEDEIILN---LNDLNKSLGLNLNEIKNINPNNFGDFKYCLCAIKNTLDY 91 Query: 100 DPLPSSLSCKVHVASVNNFPTAAGLASSAAGYACLAYTLARVYGVESDLSEVARRG 155 + K++++S P + GL SSA+ ++ Y E E+A+ G Sbjct: 92 LNIEPKTGFKINISSK--IPISCGLGSSASITIGTIKAVSGFYNKELKDDEIAKLG 145 >2QJ0-A nrPDB Length = 982 Score = 31.4 bits (69), Expect = 0.81, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 5/111 (4%) Query: 157 GSACRSLYGGFVEWQMGEQADGKDSIA-RQVAPESHWPELRVLILVVSAEKKLTGSTVGM 215 GS S+ GG QMG ++ + A + + P ++ +E+ GST+G+ Sbjct: 1 GSHMASMTGG---QQMGRGSEFRSMTAIEDILQITTDPSDTRGYSLLKSEEVPQGSTLGV 57 Query: 216 RASVETSPLLRFRAESVVPARMAEMARCIRERDFPSFAQLTMKDSNQFHAT 266 ++T L + + + C R ++ H+T Sbjct: 58 DF-IDTLLLYQLTENEKLDKPFEYLNDCFRRNQQQKRITKNKPNAESLHST 107 >2QA1-A nrPDB Length = 500 Score = 31.0 bits (68), Expect = 1.0, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Query: 340 LKGLQVRPAPLSAELQAALAM-EPTPGGVKYIIVTQVGPGPQILDDP 385 +KG++++P + L + M P PGG+ IIV + G PQ + P Sbjct: 189 IKGVELQPRMIGETLPGGMVMVGPLPGGITRIIVCERGTPPQRRETP 235 >5WAS-A nrPDB Length = 185 Score = 31.0 bits (68), Expect = 1.0, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 47/151 (31%), Gaps = 8/151 (5%) Query: 59 DFTEDRIWLNGREEDVGQPRLQACLREIRCLARKRRNSRDGDPLPSSLSCKVHVASVNNF 118 D E I +G E +V + L K R G + + V NN Sbjct: 37 DTVEVEIIPSGLEVEVFGEGQGEVPLDGSHLVVKAI--RAGLKAADAEVPGLRVVCHNNI 94 Query: 119 PTAAGLASSAAGYACLAYTLARVYGVESDLSEVARRGSG------SACRSLYGGFVEWQM 172 P + GL SSAA + ++ + S +A S+ GG V Sbjct: 95 PQSRGLGSSAAAAVAGVAAANGLADFPLTQEQIVQLSSAFEGHPDNAAASVLGGAVVSWT 154 Query: 173 GEQADGKDSIARQVAPESHWPELRVLILVVS 203 DGK P +R LV + Sbjct: 155 NLSIDGKSQPQYAAVPLEVQDNIRATALVPN 185 >3EZ1-A nrPDB Length = 423 Score = 30.6 bits (67), Expect = 1.2, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 50/158 (31%), Gaps = 14/158 (8%) Query: 253 AQLTMKDSNQFHATCLDTFPPISYLNAISWRIIHLVHRFNAHHGDTKVAYTFDAGPNAVI 312 + + + A P + ++R+ HLV A + V DAG Sbjct: 187 GETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNF-VVLARDAGYPDRA 245 Query: 313 FTLDDTVAEFVAAVWHGFPPGSN----GDTFLKGLQVRPAPLSAELQAALAMEPTPGGVK 368 F T A GF S + G Q + + + PGG++ Sbjct: 246 FVFASTSKITFAGAGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLE 305 Query: 369 YII---VTQVGPGPQILDDPCAHLLGPDG------LPK 397 ++ + P + +D+ LG G LPK Sbjct: 306 GLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPK 343 >5XLU-A nrPDB Length = 398 Score = 30.6 bits (67), Expect = 1.3, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 15/85 (17%) Query: 19 AVIKYWG-KRDEELVLPINSSLSVTLHQDQLKTTTTAV---------ISKDFTEDRIWLN 68 A K WG K+ E+L+ P S+ L ++ + +SK +D + Sbjct: 152 AAHKKWGTKKMEDLISP-----SIKLTEEGFPIDSVLADAIKDHQDKLSKTAAKDIFLPD 206 Query: 69 GREEDVGQPRLQACLREIRCLARKR 93 G G +Q L + L RK Sbjct: 207 GEPLKEGDILVQKDLAKTFKLIRKE 231 >3JC6-4 nrPDB Length = 933 Score = 30.2 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 26/70 (37%), Gaps = 5/70 (7%) Query: 207 KLTGSTVGMRASVETSPLLRFRAESVVPARMAEMARCIRERDFPSFAQLTMKDSNQFHAT 266 K R V+TS + + ++ V E R I ++D ++ ++ ++ Sbjct: 467 KKVSDK---RLDVDTSTIEQELMQNKVDHNEVEEVRQITDQDLAKIREVAARE--DLYSL 521 Query: 267 CLDTFPPISY 276 + P Y Sbjct: 522 LARSIAPSIY 531 >4Y23-A nrPDB Length = 585 Score = 30.2 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 15/85 (17%) Query: 19 AVIKYWG-KRDEELVLPINSSLSVTLHQDQLKTTTTAV---------ISKDFTEDRIWLN 68 A K WG K+ E+L+ P S+ L ++ + +SK +D + Sbjct: 152 AAHKKWGTKKMEDLISP-----SIKLTEEGFPIDSVLADAIKDHQDKLSKTAAKDIFLPD 206 Query: 69 GREEDVGQPRLQACLREIRCLARKR 93 G G +Q + + L RK Sbjct: 207 GEPLKEGDILVQKDMAKTFKLIRKE 231 >3PZL-A nrPDB Length = 313 Score = 30.2 bits (66), Expect = 1.7, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 32/71 (45%) Query: 141 VYGVESDLSEVARRGSGSACRSLYGGFVEWQMGEQADGKDSIARQVAPESHWPELRVLIL 200 V+G+ D + RRGS A S+ G +V + E + G D +A +A E + Sbjct: 39 VFGIPFDNTSSYRRGSKYAPDSIRGAYVNLESYEYSYGIDLLASGMADLGDMEESEDVEY 98 Query: 201 VVSAEKKLTGS 211 V+ + + + Sbjct: 99 VIDTVESVVSA 109 >3WY0-A nrPDB Length = 417 Score = 29.4 bits (64), Expect = 2.5, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 1/43 (2%) Query: 105 SLSCKVHVASVNNFPTAAGLASSAAGYACLAYTLARVYGVESD 147 S + + + N P+ G A GYA L G+ +D Sbjct: 308 SSTPSLALEEKNYVPSNYGWAVHPGGYAVLVAAQD-ALGLTAD 349 >6BGI-A nrPDB Length = 912 Score = 29.4 bits (64), Expect = 2.8, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 14/84 (16%) Query: 42 TLHQDQLKTTTTAVISKDFTEDRIWLN------GREEDVGQPRLQACLREIRCLARKRRN 95 T+ A + + ++ LN G EE+ PR + R + RK Sbjct: 409 TVFFSVFMALWAATFMEHWKRKQMRLNYRWDLTGFEEEEDHPRAEYEARVLEKSLRKESR 468 Query: 96 SRDGDPLPSSLSCKVHVASVNNFP 119 +++ D KV + + FP Sbjct: 469 NKETD--------KVKLTWRDRFP 484 >1ZAW-A nrPDB Length = 180 Score = 28.7 bits (62), Expect = 4.4, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 35/82 (42%) Query: 294 HHGDTKVAYTFDAGPNAVIFTLDDTVAEFVAAVWHGFPPGSNGDTFLKGLQVRPAPLSAE 353 + + + F GP AV++ + E V +++ + + LKG + +AE Sbjct: 68 KNAEYEGYEEFLKGPTAVLYVTEGDPVEAVKIIYNFYKDKKADLSRLKGGFLEGKKFTAE 127 Query: 354 LQAALAMEPTPGGVKYIIVTQV 375 +A P+ + ++V +V Sbjct: 128 EVENIAKLPSKEELYAMLVGRV 149 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.307 0.119 0.298 Lambda K H 0.267 0.0363 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,024,263 Number of Sequences: 36641 Number of extensions: 455194 Number of successful extensions: 1218 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 22 Number of HSP's that attempted gapping in prelim test: 1114 Number of HSP's gapped (non-prelim): 56 length of query: 400 length of database: 10,336,785 effective HSP length: 99 effective length of query: 301 effective length of database: 6,709,326 effective search space: 2019507126 effective search space used: 2019507126 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 60 (27.9 bits)