BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P53540 (846 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5FM1-B nrPDB 1726 0.0 3RIP-A nrPDB 42 0.001 4M9Z-A nrPDB 32 1.5 1PSW-A nrPDB 31 2.1 3EH1-A nrPDB 31 2.7 6NEQ-I nrPDB 30 4.1 5FLZ-A nrPDB 29 8.7 >5FM1-B nrPDB Length = 846 Score = 1726 bits (4471), Expect = 0.0, Method: Compositional matrix adjust. Identities = 846/846 (100%), Positives = 846/846 (100%) Query: 1 MELEPTLFGIIEALAPQLLSQSHLQTFVSDVVNLLRSSTKSATQLGPLIDFYKLQSLDSP 60 MELEPTLFGIIEALAPQLLSQSHLQTFVSDVVNLLRSSTKSATQLGPLIDFYKLQSLDSP Sbjct: 1 MELEPTLFGIIEALAPQLLSQSHLQTFVSDVVNLLRSSTKSATQLGPLIDFYKLQSLDSP 60 Query: 61 ETTIMWHKIEKFLDALFGIQNTDDMVKYLSVFQSLLPSNYRAKIVQKSSGLNMENLANHE 120 ETTIMWHKIEKFLDALFGIQNTDDMVKYLSVFQSLLPSNYRAKIVQKSSGLNMENLANHE Sbjct: 61 ETTIMWHKIEKFLDALFGIQNTDDMVKYLSVFQSLLPSNYRAKIVQKSSGLNMENLANHE 120 Query: 121 HLLSPVRAPSIYTEASFENMDRFSERRSMVSSPNRYVPSSTYSSVTLRQLSNPYYVNTIP 180 HLLSPVRAPSIYTEASFENMDRFSERRSMVSSPNRYVPSSTYSSVTLRQLSNPYYVNTIP Sbjct: 121 HLLSPVRAPSIYTEASFENMDRFSERRSMVSSPNRYVPSSTYSSVTLRQLSNPYYVNTIP 180 Query: 181 EEDILKYVSYTLLATTSALFPFDHEQIQIPSKIPNFESGLLHLIFEAGLLYQSLGYKVEK 240 EEDILKYVSYTLLATTSALFPFDHEQIQIPSKIPNFESGLLHLIFEAGLLYQSLGYKVEK Sbjct: 181 EEDILKYVSYTLLATTSALFPFDHEQIQIPSKIPNFESGLLHLIFEAGLLYQSLGYKVEK 240 Query: 241 FRMLNISPMKKALIIEISEELQNYTAFVNNLVSSGTVVSLKSLYREIYENIIRLRIYCRF 300 FRMLNISPMKKALIIEISEELQNYTAFVNNLVSSGTVVSLKSLYREIYENIIRLRIYCRF Sbjct: 241 FRMLNISPMKKALIIEISEELQNYTAFVNNLVSSGTVVSLKSLYREIYENIIRLRIYCRF 300 Query: 301 TEHLEELSGDTFLIELNIFKSHGDLTIRKIATNLFNSMISLYYEYLMNWLTKGLLRATYG 360 TEHLEELSGDTFLIELNIFKSHGDLTIRKIATNLFNSMISLYYEYLMNWLTKGLLRATYG Sbjct: 301 TEHLEELSGDTFLIELNIFKSHGDLTIRKIATNLFNSMISLYYEYLMNWLTKGLLRATYG 360 Query: 361 EFFIAENTDTNGTDDDFIYHIPIEFNQERVPAFIPKELAYKIFMIGKSYIFLEKYCKEVQ 420 EFFIAENTDTNGTDDDFIYHIPIEFNQERVPAFIPKELAYKIFMIGKSYIFLEKYCKEVQ Sbjct: 361 EFFIAENTDTNGTDDDFIYHIPIEFNQERVPAFIPKELAYKIFMIGKSYIFLEKYCKEVQ 420 Query: 421 WTNEFSKKYHVLYQSNSYRGISTNFFEIINDQYSEIVNHTNQILNQKFHYRDVVFALKNI 480 WTNEFSKKYHVLYQSNSYRGISTNFFEIINDQYSEIVNHTNQILNQKFHYRDVVFALKNI Sbjct: 421 WTNEFSKKYHVLYQSNSYRGISTNFFEIINDQYSEIVNHTNQILNQKFHYRDVVFALKNI 480 Query: 481 LLMGKSDFMDALIEKANDILATPSDSLPNYKLTRVLQEAVQLSSLRHLMNSPRNSSVING 540 LLMGKSDFMDALIEKANDILATPSDSLPNYKLTRVLQEAVQLSSLRHLMNSPRNSSVING Sbjct: 481 LLMGKSDFMDALIEKANDILATPSDSLPNYKLTRVLQEAVQLSSLRHLMNSPRNSSVING 540 Query: 541 LDARVLDLGHGSVGWDVFTLDYILYPPLSLVLNVNRPFGRKEYLRIFNFLWRFKKNNYFY 600 LDARVLDLGHGSVGWDVFTLDYILYPPLSLVLNVNRPFGRKEYLRIFNFLWRFKKNNYFY Sbjct: 541 LDARVLDLGHGSVGWDVFTLDYILYPPLSLVLNVNRPFGRKEYLRIFNFLWRFKKNNYFY 600 Query: 601 QKEMLKSNDIIRSFKKIRGYNPLIRDIINKLSRISILRTQFQQFNSKMESYYLNCIIEEN 660 QKEMLKSNDIIRSFKKIRGYNPLIRDIINKLSRISILRTQFQQFNSKMESYYLNCIIEEN Sbjct: 601 QKEMLKSNDIIRSFKKIRGYNPLIRDIINKLSRISILRTQFQQFNSKMESYYLNCIIEEN 660 Query: 661 FKEMTRKLQRTENKSQNQFDLIRLNNGTIELNGILTPKAEVLTKSSSSKPQKHAIEKTLN 720 FKEMTRKLQRTENKSQNQFDLIRLNNGTIELNGILTPKAEVLTKSSSSKPQKHAIEKTLN Sbjct: 661 FKEMTRKLQRTENKSQNQFDLIRLNNGTIELNGILTPKAEVLTKSSSSKPQKHAIEKTLN 720 Query: 721 IDELESVHNTFLTNILSHKLFATNTSEISVGDYSGQPYPTSLVLLLNSVYEFVKVYCNLN 780 IDELESVHNTFLTNILSHKLFATNTSEISVGDYSGQPYPTSLVLLLNSVYEFVKVYCNLN Sbjct: 721 IDELESVHNTFLTNILSHKLFATNTSEISVGDYSGQPYPTSLVLLLNSVYEFVKVYCNLN 780 Query: 781 DIGYEIFIKMNLNDHEASNGLLGKFNTNLKEIVSQYKNFKDRLYIFRADLKNDGDEELFL 840 DIGYEIFIKMNLNDHEASNGLLGKFNTNLKEIVSQYKNFKDRLYIFRADLKNDGDEELFL Sbjct: 781 DIGYEIFIKMNLNDHEASNGLLGKFNTNLKEIVSQYKNFKDRLYIFRADLKNDGDEELFL 840 Query: 841 LSKSLR 846 LSKSLR Sbjct: 841 LSKSLR 846 >3RIP-A nrPDB Length = 677 Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust. Identities = 68/389 (17%), Positives = 138/389 (35%), Gaps = 72/389 (18%) Query: 327 IRKIATNLFNSMISLYYEYLMNWLTKGLLRATYGEFFIAE-----NTDTNGTDDDFIYHI 381 +R + + Y+ L W+ GLL + EFFI + N +D+ I Sbjct: 168 VRSALEKILAVCHGVMYKQLSAWMLHGLLLDQHEEFFIKQGPSSGNVSAQPEEDEEDLGI 227 Query: 382 ----------------------------PIEFNQERVPAFIPKELAYKIFMIGKSYIFLE 413 E +P++IP +A KI +G+S E Sbjct: 228 GGLTGKQLRELQDLRLIEEENMLAPSLKQFSLRVEILPSYIPVRVAEKILFVGESVQMFE 287 Query: 414 KYCKEVQWTNE----------FSKKYHVLYQSNSYRGISTNFFEIINDQYSEIVNHTNQI 463 + V T + F+ + H L Q + + +F ++++ S + H ++ Sbjct: 288 N--QNVNLTRKGSILKNQEDTFAAELHRLKQQPLFSLV--DFEQVVDRIRSTVAEHLWKL 343 Query: 464 LNQKFHYRDVVFALKNILLMGKSDFMDALIEKANDILATPSDSLPNYKLTRVLQEAVQLS 523 + ++ + +K+ L+G+ + A I+ A +L TP ++ + + Q++ Sbjct: 344 MVEESDLLGQLKIIKDFYLLGRGELFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQSAHKV 403 Query: 524 SLR--------------HLMNSPRNSSVINGLDARVLDLGHGSVGWDVFTLDYILYPPLS 569 L H + G + GW L Y + PL Sbjct: 404 LLDDDNLLPLLHLTIEYHGKEHKDATQAREGPSRETSPREAPASGWAALGLSYKVQWPLH 463 Query: 570 LVLNVNRPFGRKEYLRIFNFLWRFKKNN--------YFYQKEMLKSNDIIRSFKKIRGYN 621 ++ P ++Y +F +L ++ Q++ LKSN ++R + Sbjct: 464 ILFT---PAVLEKYNVVFKYLLSVRRVQAELQHCWALQMQRKHLKSNQTDAIKWRLRNHM 520 Query: 622 PLIRDIINKLSRISILRTQFQQFNSKMES 650 + D + ++ +L +QF Q ++ S Sbjct: 521 AFLVDNLQYYLQVDVLESQFSQLLHQINS 549 >4M9Z-A nrPDB Length = 549 Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust. Identities = 13/31 (41%), Positives = 20/31 (64%) Query: 22 SHLQTFVSDVVNLLRSSTKSATQLGPLIDFY 52 S + T + + N LR + A++LGPLIDF+ Sbjct: 45 SKMSTRLERIANFLRIYRRQASELGPLIDFF 75 >1PSW-A nrPDB Length = 348 Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust. Identities = 13/38 (34%), Positives = 21/38 (55%) Query: 770 YEFVKVYCNLNDIGYEIFIKMNLNDHEASNGLLGKFNT 807 Y + ++ L D GY++ + + DHEA N +L NT Sbjct: 200 YHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNT 237 >3EH1-A nrPDB Length = 751 Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust. Identities = 14/24 (58%), Positives = 15/24 (62%) Query: 36 RSSTKSATQLGPLIDFYKLQSLDS 59 RSSTK LGP DFYK +LD Sbjct: 315 RSSTKVVQHLGPATDFYKKLALDC 338 >6NEQ-I nrPDB Length = 396 Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust. Identities = 42/211 (19%), Positives = 88/211 (41%), Gaps = 49/211 (23%) Query: 417 KEVQWTNEFSKKYHVLYQSNSYRGISTNFFEIINDQYSEIVN--------HTNQILNQKF 468 + VQW E + +H L+ Y G +++ ++++ Y ++++ + ++K Sbjct: 136 RAVQW-GEDGRPFHFLF----YTG-KQSYYSLMHEAYGKVLHAEERQDQLRAKGLFSEKS 189 Query: 469 HYRDVVFALKNILLMGKSDFMDALIEKAND------------ILATPSDSLPNYKLTRVL 516 +D++ + I K + + L+EK +D + A P D+ + R Sbjct: 190 KSKDLIGSRWLI----KEELEEMLVEKLSDQDYAQFIRLLERLSALPCDAAEEEFVGR-F 244 Query: 517 QEAVQLSSLRHL----------MNSPRNSSVINGLDARVLDLGHGSVGWDVFTLDYILYP 566 + V + S +HL M +A + GHGS ++ +DY+LY Sbjct: 245 RRTVTVQSKKHLIEPLQYDEQGMAFSTGQGKRKTANAEAVVYGHGSGKIEINGVDYLLYF 304 Query: 567 PLSLVLNVNRPFGRKEYLRIFNFLWRFKKNN 597 P++ R++ + F+FL R K++ Sbjct: 305 PVTQ--------DREQLMFPFHFLDRLGKHD 327 >5FLZ-A nrPDB Length = 823 Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust. Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%) Query: 318 IFKSHGDLTIRKIATNLFNSMISLYYEYLMNWLTKGLLRATYGEFFIAENTDTNGTDDD 376 I ++ GD + L N++ Y L WLT+G+L Y EF + D G D+ Sbjct: 255 ILENLGDRSSVMFLKKLLNNISQDYCTMLYEWLTQGILNDPYQEFMTYD--DLEGKTDN 311 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5FM1-B nrPDB 1545 0.0 3RIP-A nrPDB 452 e-127 Sequences not found previously or not previously below threshold: 5FLZ-A nrPDB 37 0.053 5WLC-LH nrPDB 33 0.44 4M9Z-A nrPDB 33 0.62 3EH1-A nrPDB 32 1.6 5UOT-0 nrPDB 30 3.4 1TT5-A nrPDB 30 4.2 1PSW-A nrPDB 30 4.3 4E4J-A nrPDB 30 4.5 6DQW-A nrPDB 30 4.8 3IUG-A nrPDB 30 6.0 5NTU-A nrPDB 30 6.4 5IJ6-A nrPDB 29 7.6 2BS9-A nrPDB 29 8.3 CONVERGED! >5FM1-B nrPDB Length = 846 Score = 1545 bits (4000), Expect = 0.0, Method: Composition-based stats. Identities = 846/846 (100%), Positives = 846/846 (100%) Query: 1 MELEPTLFGIIEALAPQLLSQSHLQTFVSDVVNLLRSSTKSATQLGPLIDFYKLQSLDSP 60 MELEPTLFGIIEALAPQLLSQSHLQTFVSDVVNLLRSSTKSATQLGPLIDFYKLQSLDSP Sbjct: 1 MELEPTLFGIIEALAPQLLSQSHLQTFVSDVVNLLRSSTKSATQLGPLIDFYKLQSLDSP 60 Query: 61 ETTIMWHKIEKFLDALFGIQNTDDMVKYLSVFQSLLPSNYRAKIVQKSSGLNMENLANHE 120 ETTIMWHKIEKFLDALFGIQNTDDMVKYLSVFQSLLPSNYRAKIVQKSSGLNMENLANHE Sbjct: 61 ETTIMWHKIEKFLDALFGIQNTDDMVKYLSVFQSLLPSNYRAKIVQKSSGLNMENLANHE 120 Query: 121 HLLSPVRAPSIYTEASFENMDRFSERRSMVSSPNRYVPSSTYSSVTLRQLSNPYYVNTIP 180 HLLSPVRAPSIYTEASFENMDRFSERRSMVSSPNRYVPSSTYSSVTLRQLSNPYYVNTIP Sbjct: 121 HLLSPVRAPSIYTEASFENMDRFSERRSMVSSPNRYVPSSTYSSVTLRQLSNPYYVNTIP 180 Query: 181 EEDILKYVSYTLLATTSALFPFDHEQIQIPSKIPNFESGLLHLIFEAGLLYQSLGYKVEK 240 EEDILKYVSYTLLATTSALFPFDHEQIQIPSKIPNFESGLLHLIFEAGLLYQSLGYKVEK Sbjct: 181 EEDILKYVSYTLLATTSALFPFDHEQIQIPSKIPNFESGLLHLIFEAGLLYQSLGYKVEK 240 Query: 241 FRMLNISPMKKALIIEISEELQNYTAFVNNLVSSGTVVSLKSLYREIYENIIRLRIYCRF 300 FRMLNISPMKKALIIEISEELQNYTAFVNNLVSSGTVVSLKSLYREIYENIIRLRIYCRF Sbjct: 241 FRMLNISPMKKALIIEISEELQNYTAFVNNLVSSGTVVSLKSLYREIYENIIRLRIYCRF 300 Query: 301 TEHLEELSGDTFLIELNIFKSHGDLTIRKIATNLFNSMISLYYEYLMNWLTKGLLRATYG 360 TEHLEELSGDTFLIELNIFKSHGDLTIRKIATNLFNSMISLYYEYLMNWLTKGLLRATYG Sbjct: 301 TEHLEELSGDTFLIELNIFKSHGDLTIRKIATNLFNSMISLYYEYLMNWLTKGLLRATYG 360 Query: 361 EFFIAENTDTNGTDDDFIYHIPIEFNQERVPAFIPKELAYKIFMIGKSYIFLEKYCKEVQ 420 EFFIAENTDTNGTDDDFIYHIPIEFNQERVPAFIPKELAYKIFMIGKSYIFLEKYCKEVQ Sbjct: 361 EFFIAENTDTNGTDDDFIYHIPIEFNQERVPAFIPKELAYKIFMIGKSYIFLEKYCKEVQ 420 Query: 421 WTNEFSKKYHVLYQSNSYRGISTNFFEIINDQYSEIVNHTNQILNQKFHYRDVVFALKNI 480 WTNEFSKKYHVLYQSNSYRGISTNFFEIINDQYSEIVNHTNQILNQKFHYRDVVFALKNI Sbjct: 421 WTNEFSKKYHVLYQSNSYRGISTNFFEIINDQYSEIVNHTNQILNQKFHYRDVVFALKNI 480 Query: 481 LLMGKSDFMDALIEKANDILATPSDSLPNYKLTRVLQEAVQLSSLRHLMNSPRNSSVING 540 LLMGKSDFMDALIEKANDILATPSDSLPNYKLTRVLQEAVQLSSLRHLMNSPRNSSVING Sbjct: 481 LLMGKSDFMDALIEKANDILATPSDSLPNYKLTRVLQEAVQLSSLRHLMNSPRNSSVING 540 Query: 541 LDARVLDLGHGSVGWDVFTLDYILYPPLSLVLNVNRPFGRKEYLRIFNFLWRFKKNNYFY 600 LDARVLDLGHGSVGWDVFTLDYILYPPLSLVLNVNRPFGRKEYLRIFNFLWRFKKNNYFY Sbjct: 541 LDARVLDLGHGSVGWDVFTLDYILYPPLSLVLNVNRPFGRKEYLRIFNFLWRFKKNNYFY 600 Query: 601 QKEMLKSNDIIRSFKKIRGYNPLIRDIINKLSRISILRTQFQQFNSKMESYYLNCIIEEN 660 QKEMLKSNDIIRSFKKIRGYNPLIRDIINKLSRISILRTQFQQFNSKMESYYLNCIIEEN Sbjct: 601 QKEMLKSNDIIRSFKKIRGYNPLIRDIINKLSRISILRTQFQQFNSKMESYYLNCIIEEN 660 Query: 661 FKEMTRKLQRTENKSQNQFDLIRLNNGTIELNGILTPKAEVLTKSSSSKPQKHAIEKTLN 720 FKEMTRKLQRTENKSQNQFDLIRLNNGTIELNGILTPKAEVLTKSSSSKPQKHAIEKTLN Sbjct: 661 FKEMTRKLQRTENKSQNQFDLIRLNNGTIELNGILTPKAEVLTKSSSSKPQKHAIEKTLN 720 Query: 721 IDELESVHNTFLTNILSHKLFATNTSEISVGDYSGQPYPTSLVLLLNSVYEFVKVYCNLN 780 IDELESVHNTFLTNILSHKLFATNTSEISVGDYSGQPYPTSLVLLLNSVYEFVKVYCNLN Sbjct: 721 IDELESVHNTFLTNILSHKLFATNTSEISVGDYSGQPYPTSLVLLLNSVYEFVKVYCNLN 780 Query: 781 DIGYEIFIKMNLNDHEASNGLLGKFNTNLKEIVSQYKNFKDRLYIFRADLKNDGDEELFL 840 DIGYEIFIKMNLNDHEASNGLLGKFNTNLKEIVSQYKNFKDRLYIFRADLKNDGDEELFL Sbjct: 781 DIGYEIFIKMNLNDHEASNGLLGKFNTNLKEIVSQYKNFKDRLYIFRADLKNDGDEELFL 840 Query: 841 LSKSLR 846 LSKSLR Sbjct: 841 LSKSLR 846 >3RIP-A nrPDB Length = 677 Score = 452 bits (1164), Expect = e-127, Method: Composition-based stats. Identities = 68/389 (17%), Positives = 138/389 (35%), Gaps = 72/389 (18%) Query: 327 IRKIATNLFNSMISLYYEYLMNWLTKGLLRATYGEFFIAE-----NTDTNGTDDDFIYHI 381 +R + + Y+ L W+ GLL + EFFI + N +D+ I Sbjct: 168 VRSALEKILAVCHGVMYKQLSAWMLHGLLLDQHEEFFIKQGPSSGNVSAQPEEDEEDLGI 227 Query: 382 ----------------------------PIEFNQERVPAFIPKELAYKIFMIGKSYIFLE 413 E +P++IP +A KI +G+S E Sbjct: 228 GGLTGKQLRELQDLRLIEEENMLAPSLKQFSLRVEILPSYIPVRVAEKILFVGESVQMFE 287 Query: 414 KYCKEVQWTNE----------FSKKYHVLYQSNSYRGISTNFFEIINDQYSEIVNHTNQI 463 + V T + F+ + H L Q + + +F ++++ S + H ++ Sbjct: 288 N--QNVNLTRKGSILKNQEDTFAAELHRLKQQPLFSLV--DFEQVVDRIRSTVAEHLWKL 343 Query: 464 LNQKFHYRDVVFALKNILLMGKSDFMDALIEKANDILATPSDSLPNYKLTRVLQEAVQLS 523 + ++ + +K+ L+G+ + A I+ A +L TP ++ + + Q++ Sbjct: 344 MVEESDLLGQLKIIKDFYLLGRGELFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQSAHKV 403 Query: 524 SLR--------------HLMNSPRNSSVINGLDARVLDLGHGSVGWDVFTLDYILYPPLS 569 L H + G + GW L Y + PL Sbjct: 404 LLDDDNLLPLLHLTIEYHGKEHKDATQAREGPSRETSPREAPASGWAALGLSYKVQWPLH 463 Query: 570 LVLNVNRPFGRKEYLRIFNFLWRFKKNN--------YFYQKEMLKSNDIIRSFKKIRGYN 621 ++ P ++Y +F +L ++ Q++ LKSN ++R + Sbjct: 464 ILFT---PAVLEKYNVVFKYLLSVRRVQAELQHCWALQMQRKHLKSNQTDAIKWRLRNHM 520 Query: 622 PLIRDIINKLSRISILRTQFQQFNSKMES 650 + D + ++ +L +QF Q ++ S Sbjct: 521 AFLVDNLQYYLQVDVLESQFSQLLHQINS 549 >5FLZ-A nrPDB Length = 823 Score = 36.6 bits (83), Expect = 0.053, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 70/182 (38%), Gaps = 16/182 (8%) Query: 313 LIELNIFKSHGDLTIRKIATNLFNSMISLYYEYLMNWLTKGLLRATYGEFFIAENTDTNG 372 + + I ++ GD + L N++ Y L WLT+G+L Y EF ++ + Sbjct: 250 IFQQKILENLGDRSSVMFLKKLLNNISQDYCTMLYEWLTQGILNDPYQEFMTYDDLEGK- 308 Query: 373 TDDDFI-----YHIPIEFNQERV----PAFIPKELAYKIFMIGKSYIFLEKYCKEVQWTN 423 TD+ F + ++ + + K L +K+ G I L+ +Q Sbjct: 309 TDNIFDTRDRAWDTQYFIRKDVLLRDCDSEEDKNLLFKMLRTG---ILLKVVRASLQIPT 365 Query: 424 EFSKKYHVLYQS-NSYRGI--STNFFEIINDQYSEIVNHTNQILNQKFHYRDVVFALKNI 480 S + Q N + + +N ++ YS ++ Q + +V+ L+ I Sbjct: 366 IPSNSSDITIQEINDFADLMEGSNLELYVDKCYSRANEIFLKLFFQGYDLINVLKHLQQI 425 Query: 481 LL 482 L Sbjct: 426 FL 427 >5WLC-LH nrPDB Length = 896 Score = 33.5 bits (75), Expect = 0.44, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 24/139 (17%) Query: 637 LRTQFQQFNSKMESYYLNCII---EENFKEMTRKLQRTENKSQNQFDLIRLN----NGTI 689 L T QQF ++ ++C + + N+ + LQ TEN S + + + LN + Sbjct: 326 LETNSQQFLPRLNGIIIDCQVLGPQGNYYSLI--LQMTENNSNSDYQFLLLNASDLTSKL 383 Query: 690 ELNG-----------ILTPKAEVLTKSSSSKPQKHAIEKTLNIDELESVHNTFLTNI--- 735 +NG I P + + TK+S+S + +K + ++S F TN+ Sbjct: 384 SINGPLPVFNSTIKHIQQPISAMNTKNSNSITSLNHSKKKQSRKLIKSRRQDFTTNVEIN 443 Query: 736 -LSHKLFATNTSEISVGDY 753 ++ L+ + S + + D+ Sbjct: 444 PINKNLYFPHISAVQIFDF 462 >4M9Z-A nrPDB Length = 549 Score = 32.7 bits (73), Expect = 0.62, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 20/31 (64%) Query: 22 SHLQTFVSDVVNLLRSSTKSATQLGPLIDFY 52 S + T + + N LR + A++LGPLIDF+ Sbjct: 45 SKMSTRLERIANFLRIYRRQASELGPLIDFF 75 >3EH1-A nrPDB Length = 751 Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats. Identities = 14/23 (60%), Positives = 15/23 (65%) Query: 36 RSSTKSATQLGPLIDFYKLQSLD 58 RSSTK LGP DFYK +LD Sbjct: 315 RSSTKVVQHLGPATDFYKKLALD 337 >5UOT-0 nrPDB Length = 619 Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats. Identities = 53/381 (13%), Positives = 129/381 (33%), Gaps = 65/381 (17%) Query: 315 ELNIFKSH---------GDLTIRKIATNLFNSMISLYYEYLMNWLTKGLLRATYGEFFIA 365 E+ F++H G T+ ++A L +I + L +G +R ++ + Sbjct: 254 EITFFQTHPYFRVLLEEGSATVPRLAERLTTELI--MHIQKSLPLLEGQIRESHQK---- 307 Query: 366 ENTDTNGTDDDFIYHIPIEFNQERVPAFIPKELAYKIFMIGKSYIFLEKYCKEVQWTNEF 425 T++ R A IP + A K+F + + + +++ E Sbjct: 308 ------ATEE-----------LRRCGADIPSQEADKMFFLIEKIKMFNQDIEKLVEGEEV 350 Query: 426 SKKYHVLYQSNSYRGISTNFFEIINDQYSEIVNHTNQILNQKFHYRDVVFALKNILLMGK 485 ++ ++ Y I +F + + I++++ + + K +L Sbjct: 351 VRE----NETRLYNKIREDFKNWVG-ILATNTQKVKNIIHEEVEKYEKQYRGKELLGFVN 405 Query: 486 SDFMDALIEKANDILATPSDSLPNYKLTRVLQEAVQLSSLRHLMNSPRNSSVINGLDARV 545 + ++ + L P+ S+ K ++Q+A + +H + + Sbjct: 406 YKTFEIIVHQYIQQLVEPALSMLQ-KAMEIIQQAFINVAKKHFGEFFNLNQTVQS-TIED 463 Query: 546 LDLGHGSVGWDVFTLDYILYPPLSL---VLNVNRPFGRKEYLRIFNFLWRFKKNNYFYQK 602 + + H + ++ L + + + + +V R+E IFN L +N Sbjct: 464 IKVKHTAKAENMIQLQFRMEQMVFCQDQIYSVVLKKVREE---IFNPLGTPSQNMKL--N 518 Query: 603 EMLKSNDI----------------IRSFKKIRGYNPLIRDIINKLSRISILRTQFQQFNS 646 SN+ + + K++ P I L+ Q Sbjct: 519 SHFPSNESSVSSFTEIGIHLNAYFLETSKRLANQIPFIIQYFMLRENGDSLQKAMMQILQ 578 Query: 647 KMESYYLNCIIEENFKEMTRK 667 + Y + +++E + T++ Sbjct: 579 EKNRY--SWLLQEQSETATKR 597 >1TT5-A nrPDB Length = 531 Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 47/117 (40%), Gaps = 22/117 (18%) Query: 564 LYPPLSLVLNVNRPFGRKEYLRIF------------NFLWRFKKNNYFYQ-KEMLKSNDI 610 + + L + R +G Y+RI N L + + F + +E +S D+ Sbjct: 144 VLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKPFPELREHFQSYDL 203 Query: 611 IRSFKKIRGYNPLIRDIINKLSRISILRTQFQQFNSKMESYYLNCIIEENFKEMTRK 667 KK + P I I L++ + + N ++ Y +E+F+++ R+ Sbjct: 204 DHMEKKDHSHTPWIVIIAKYLAQ------WYSETNGRIPKTYKE---KEDFRDLIRQ 251 >1PSW-A nrPDB Length = 348 Score = 30.0 bits (66), Expect = 4.3, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 21/38 (55%) Query: 770 YEFVKVYCNLNDIGYEIFIKMNLNDHEASNGLLGKFNT 807 Y + ++ L D GY++ + + DHEA N +L NT Sbjct: 200 YHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNT 237 >4E4J-A nrPDB Length = 433 Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats. Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 22/154 (14%) Query: 572 LNVNRPFGRKEYLRIFN-FLWRFKKNNYFYQKEMLKSNDIIRSFKKIRGYNPLIRDIIN- 629 L+ P +KE + +L F ++M+ I+ + I+ NPLI D + Sbjct: 124 LDEALPVLKKEIRPVVKDYLLSFPTVQ--MVRKMMSG--ILANELNIKQDNPLIIDGMPN 179 Query: 630 -KLSRISILRTQFQQFNSKMESYYLNCIIEENFKE---MTRKLQRTENKSQNQ---FDLI 682 +R F S +NC+ K +R + K +N FD++ Sbjct: 180 LYFTR--------DPFASMGNGVSINCMKYPTRKREVIFSRFVFTNNPKYKNTPRYFDIV 231 Query: 683 RLNNGTIELNGILTPKAEVLTKSSSSKPQKHAIE 716 NNGTIE I ++ L +S + AIE Sbjct: 232 G-NNGTIEGGDIFIYNSKTLVIGNSERTNFAAIE 264 >6DQW-A nrPDB Length = 585 Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats. Identities = 9/66 (13%), Positives = 25/66 (37%) Query: 457 VNHTNQILNQKFHYRDVVFALKNILLMGKSDFMDALIEKANDILATPSDSLPNYKLTRVL 516 V H +Q+ Q+ + + ++ ++ +++ + L + R++ Sbjct: 491 VQHMSQLTQQEKDVFKTFKEISQLEIVQQAGIRQKFVDQGQSLNLNIPAELAIKDVNRLM 550 Query: 517 QEAVQL 522 EA Q Sbjct: 551 IEAWQQ 556 >3IUG-A nrPDB Length = 229 Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 24/49 (48%) Query: 53 KLQSLDSPETTIMWHKIEKFLDALFGIQNTDDMVKYLSVFQSLLPSNYR 101 KL + P + + EKF DA+ + + ++K V Q L P +YR Sbjct: 99 KLYFRELPNPLLTYQLYEKFSDAVSAATDEERLIKIHDVIQQLPPPHYR 147 >5NTU-A nrPDB Length = 335 Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 30/54 (55%) Query: 11 IEALAPQLLSQSHLQTFVSDVVNLLRSSTKSATQLGPLIDFYKLQSLDSPETTI 64 IEA+ Q+LS+ L+T + +++R A L LID Y +Q DS + ++ Sbjct: 13 IEAIKIQILSKLRLETAPNISKDVIRQLLPKAPPLRELIDQYDVQRDDSSDGSL 66 >5IJ6-A nrPDB Length = 355 Score = 29.3 bits (64), Expect = 7.6, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 5/52 (9%) Query: 313 LIELNIFKSHGDLTIRKIATNLFNSMISLYYEYLMNWLTKGLLRATYGEFFI 364 +IEL I+ GD +K T + +++ + Y+Y W + L + ++F+ Sbjct: 296 IIELTIY---GDYFAKKETTEIVAALLGVDYQYSSIW--QALAAFNFEDYFV 342 >2BS9-A nrPDB Length = 503 Score = 29.3 bits (64), Expect = 8.3, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Query: 574 VNRPF-GRKEYLRIFNFLWRFKKNNYFYQKE---MLKSNDIIRSFKKIRGYNPLIRDIIN 629 VN P GR+++ + + F + QKE LK F+ IRG+ L+ D + Sbjct: 4 VNVPSNGREKFKKNWKFCVGTGRLGLALQKEYLDHLKLVQEKIGFRYIRGH-GLLSDDVG 62 Query: 630 KLSRISI 636 + I Sbjct: 63 IYREVEI 69 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.317 0.134 0.364 Lambda K H 0.267 0.0411 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,020,461 Number of Sequences: 36641 Number of extensions: 1324164 Number of successful extensions: 3622 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 3585 Number of HSP's gapped (non-prelim): 48 length of query: 846 length of database: 10,336,785 effective HSP length: 105 effective length of query: 741 effective length of database: 6,489,480 effective search space: 4808704680 effective search space used: 4808704680 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 63 (28.9 bits)