BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P53131 (767 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5I8Q-A nrPDB 1593 0.0 5D0U-A nrPDB 1072 0.0 6ID1-V nrPDB 908 0.0 5XDR-A nrPDB 905 0.0 6I3O-A nrPDB 660 0.0 6FA9-A nrPDB 601 e-172 5GM6-Y nrPDB 533 e-151 5VHD-D nrPDB 332 3e-91 5N8S-A nrPDB 330 2e-90 6HEG-A nrPDB 237 1e-62 3I4U-A nrPDB 207 2e-53 3LLM-A nrPDB 130 2e-30 4CBI-A nrPDB 68 2e-11 5WX1-A nrPDB 67 3e-11 5WSO-A nrPDB 63 4e-10 2Z83-A nrPDB 37 0.043 2QEQ-A nrPDB 33 0.33 1QON-A nrPDB 33 0.43 5OVO-B nrPDB 33 0.43 4B0Z-A nrPDB 32 0.79 5GJU-A nrPDB 32 1.2 2V8O-A nrPDB 32 1.2 4NHO-A nrPDB 32 1.5 3JCR-F nrPDB 32 1.5 3S61-A nrPDB 32 1.5 1UIR-A nrPDB 32 1.5 2WV9-A nrPDB 31 1.6 6C2V-A nrPDB 31 1.7 2V6J-A nrPDB 31 2.1 5L3S-B nrPDB 31 2.2 3PEW-A nrPDB 31 2.3 4C7O-A nrPDB 30 5.5 4B3F-X nrPDB 29 6.6 2QAG-A nrPDB 29 6.6 >5I8Q-A nrPDB Length = 767 Score = 1593 bits (4124), Expect = 0.0, Method: Compositional matrix adjust. Identities = 767/767 (100%), Positives = 767/767 (100%) Query: 1 MGSKRRFSSEHPDPVETSIPEQAAEIAEELSKQHPLPSEEPLVHHDAGEFKGLQRHHTSA 60 MGSKRRFSSEHPDPVETSIPEQAAEIAEELSKQHPLPSEEPLVHHDAGEFKGLQRHHTSA Sbjct: 1 MGSKRRFSSEHPDPVETSIPEQAAEIAEELSKQHPLPSEEPLVHHDAGEFKGLQRHHTSA 60 Query: 61 EEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGS 120 EEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGS Sbjct: 61 EEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGS 120 Query: 121 GKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFEN 180 GKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFEN Sbjct: 121 GKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFEN 180 Query: 181 KTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPD 240 KTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPD Sbjct: 181 KTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPD 240 Query: 241 LKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHAT 300 LKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHAT Sbjct: 241 LKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHAT 300 Query: 301 EEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPA 360 EEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPA Sbjct: 301 EEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPA 360 Query: 361 PESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS 420 PESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS Sbjct: 361 PESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS 420 Query: 421 AQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF 480 AQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF Sbjct: 421 AQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF 480 Query: 481 DFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQ 540 DFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQ Sbjct: 481 DFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQ 540 Query: 541 EILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIH 600 EILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIH Sbjct: 541 EILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIH 600 Query: 601 KWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQV 660 KWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQV Sbjct: 601 KWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQV 660 Query: 661 AKKRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIE 720 AKKRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIE Sbjct: 661 AKKRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIE 720 Query: 721 IAPAYYDLSNFQKGDVKLSLERIKEKVDRLNELKQGKNKKKSKHSKK 767 IAPAYYDLSNFQKGDVKLSLERIKEKVDRLNELKQGKNKKKSKHSKK Sbjct: 721 IAPAYYDLSNFQKGDVKLSLERIKEKVDRLNELKQGKNKKKSKHSKK 767 >5D0U-A nrPDB Length = 714 Score = 1072 bits (2772), Expect = 0.0, Method: Compositional matrix adjust. Identities = 504/703 (71%), Positives = 599/703 (85%), Gaps = 3/703 (0%) Query: 58 TSAEEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGE 117 T+A++A+ +ED INP+TG+ + +Y ILK RR+LPV+ QR EFL LY NNQI+VFVGE Sbjct: 3 TTAKQAEAVEDSDINPWTGQRHSERYFKILKARRKLPVNKQRQEFLDLYHNNQILVFVGE 62 Query: 118 TGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIR 177 TGSGKTTQIPQ+VL+DE+PH +ACTQPRRVAAMSVAQRVA+E+DVKLGEEVGYSIR Sbjct: 63 TGSGKTTQIPQYVLYDELPHQTGKLIACTQPRRVAAMSVAQRVADELDVKLGEEVGYSIR 122 Query: 178 FENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKR 237 FENKTS+KT+LKYMTDG LLREAM D D+SRYSCIILDEAHERTLATDILM LLKQ+ +R Sbjct: 123 FENKTSSKTLLKYMTDGQLLREAMHDRDMSRYSCIILDEAHERTLATDILMALLKQLSER 182 Query: 238 RPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQI 297 R DLKII+MSATLDA+KFQ YF +APLLAVPGRT+PVE++YTPE +RDY+++AIRTVLQI Sbjct: 183 RKDLKIIVMSATLDAQKFQSYFFNAPLLAVPGRTHPVEIFYTPEAERDYVEAAIRTVLQI 242 Query: 298 HATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIF 357 HA E GDILLFLTGE+EIEDA R+ISLE D+++RE GP+SVYPLYG+LPPHQQQRIF Sbjct: 243 HACEPEGDILLFLTGEEEIEDACRRISLEVDEMIRESDAGPMSVYPLYGTLPPHQQQRIF 302 Query: 358 EPAPESH--NGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSP 415 E AP+ GRPGRK +++TNIAETSLTIDGIVYVVDPGFSKQK+YNPR RVESLLVSP Sbjct: 303 EKAPQPFRPGGRPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNPRTRVESLLVSP 362 Query: 416 ISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGID 475 ISKASAQQRAGRAGRTRPGKCFRLYTEEAF+KELIEQ+YPEILRSNLS+TVLELKKLG++ Sbjct: 363 ISKASAQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQTYPEILRSNLSNTVLELKKLGVE 422 Query: 476 DLVHFDFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFE 535 DLVHFD MDPPAPETMMRALEELNYLACLDD+G LTPLG LAS+FPLDP LAVMLI S E Sbjct: 423 DLVHFDLMDPPAPETMMRALEELNYLACLDDDGELTPLGNLASEFPLDPALAVMLISSPE 482 Query: 536 FQCSQEILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAY 595 F CS EIL+I ++LSVP +++RP +KRAD+ K FAHPDGDH+TLLN YHA+K EA Sbjct: 483 FYCSNEILSITSLLSVPQIWVRPANARKRADEMKAQFAHPDGDHLTLLNAYHAYKGAEAR 542 Query: 596 EYGIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASG 655 + KWC +H+L+YR LS+ADN+R+QL+++M + +EL +T + Y+ NIR+AL +G Sbjct: 543 GEDMKKWCHEHFLSYRHLSSADNVRAQLKKIMETHGIELVSTPFHDKNYYTNIRRALLAG 602 Query: 656 FFMQVA-KKRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVR 714 FFMQVA ++ S +K Y TVKD Q VLIHPST + EWV+YNEFVLT+K Y+RTVT++R Sbjct: 603 FFMQVAMRESSNSKVYKTVKDEQLVLIHPSTTVTTPYEWVVYNEFVLTTKQYVRTVTNIR 662 Query: 715 PEWLIEIAPAYYDLSNFQKGDVKLSLERIKEKVDRLNELKQGK 757 PEWL+EIAP YYDLS FQKG++K +L R+ EK+ R +K K Sbjct: 663 PEWLLEIAPVYYDLSTFQKGEIKNALTRVAEKIRRQQAMKASK 705 >6ID1-V nrPDB Length = 795 Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/682 (65%), Positives = 547/682 (80%), Gaps = 14/682 (2%) Query: 71 INPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFV 130 INPFT TP+Y DILK R +LPV +D F + +Q V VGETGSGKTTQIPQ+ Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174 Query: 131 LFDEMPHLENTQ--VACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTIL 188 + + M L + VACTQPRRVAAMSVAQRVA+EMDV LG+EVGYSIRFE+ +S KTIL Sbjct: 175 V-EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTIL 233 Query: 189 KYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSA 248 KYMTDGMLLREAM D L RY IILDEAHERTLATDILMG+LK+VV++R DLK+I+MSA Sbjct: 234 KYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSA 293 Query: 249 TLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEA-GDIL 307 TLDA KFQ YF++ PLL +PGRT+PVE++YTPE +RDYL++AIRTV+QIH EE GD+L Sbjct: 294 TLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 353 Query: 308 LFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAP-ESHNG 366 LFLTG++EI++A ++I E D L E G + + PLY +LPP QQQRIFEP P + NG Sbjct: 354 LFLTGQEEIDEACKRIKREVDDLGPE--VGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNG 411 Query: 367 RPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAG 426 GRKVV+STNIAETSLTIDG+V+V+DPGF+KQKVYNPRIRVESLLV+ ISKASAQQRAG Sbjct: 412 AIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAG 471 Query: 427 RAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPP 486 RAGRTRPGKCFRLYTE+A++ E+ + +YPEILRSNL S VL+LKKLGIDDLVHFDFMDPP Sbjct: 472 RAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPP 531 Query: 487 APETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIV 546 APET+MRALE LNYLA L+D+G+LT LG + ++FPLDP LA M+I S ++ CS E+L+I Sbjct: 532 APETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSIT 591 Query: 547 AMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDH 606 AMLSVP F+RPT+ KK AD+AK FAH DGDH+TLLNVYHAFK + +WC D+ Sbjct: 592 AMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESV----QWCYDN 647 Query: 607 YLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAK-KRS 665 ++NYRSL +ADN+R QL R+M+R+NL +TD+ S Y+ NIRKAL +G+FMQVA +R+ Sbjct: 648 FINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERT 707 Query: 666 GAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAY 725 G Y+TVKDNQ V +HPSTVL H EWV+YNEFVLT+KNYIRT T ++PEWL++IAP Y Sbjct: 708 GH--YLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQY 765 Query: 726 YDLSNFQKGDVKLSLERIKEKV 747 YD+SNF + + K L+RI K+ Sbjct: 766 YDMSNFPQCEAKRQLDRIIAKL 787 >5XDR-A nrPDB Length = 690 Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust. Identities = 447/682 (65%), Positives = 547/682 (80%), Gaps = 14/682 (2%) Query: 71 INPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFV 130 INPFT TP+Y DILK R +LPV +D F + +Q V VGETGSGKTTQIPQ+ Sbjct: 10 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 69 Query: 131 LFDEMPHLENTQ--VACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTIL 188 + + M L + VACTQPRRVAAMSVAQRVA+EMDV LG+EVGYSIRFE+ +S KTIL Sbjct: 70 V-EYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTIL 128 Query: 189 KYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSA 248 KYMTDGMLLREAM D L RY IILDEAHERTLATDILMG+LK+VV++R DLK+I+MSA Sbjct: 129 KYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSA 188 Query: 249 TLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEA-GDIL 307 TLDA KFQ YF++ PLL +PGRT+PVE++YTPE +RDYL++AIRTV+QIH EE GD+L Sbjct: 189 TLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLL 248 Query: 308 LFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAP-ESHNG 366 LFLTG++EI++A ++I E D L E G + + PLY +LPP QQQRIFEP P + NG Sbjct: 249 LFLTGQEEIDEACKRIKREVDDLGPE--VGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNG 306 Query: 367 RPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAG 426 GRKVV+STNIAETSLTIDG+V+V+DPGF+KQKVYNPRIRVESLLV+ ISKASAQQRAG Sbjct: 307 AIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAG 366 Query: 427 RAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPP 486 RAGRTRPGKCFRLYTE+A++ E+ + +YPEILRSNL S VL+LKKLGIDDLVHFDFMDPP Sbjct: 367 RAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPP 426 Query: 487 APETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIV 546 APET+MRALE LNYLA L+D+G+LT LG + ++FPLDP LA M+I S ++ CS E+L+I Sbjct: 427 APETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSIT 486 Query: 547 AMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDH 606 AMLSVP F+RPT+ KK AD+AK FAH DGDH+TLLNVYHAFK + +WC D+ Sbjct: 487 AMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESV----QWCYDN 542 Query: 607 YLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAK-KRS 665 ++NYRSL +ADN+R QL R+M+R+NL ++D+ S Y+ NIRKAL +G+FMQVA +R+ Sbjct: 543 FINYRSLMSADNVRQQLSRIMDRFNLPRRSSDFTSRDYYINIRKALVTGYFMQVAHLERT 602 Query: 666 GAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAY 725 G Y+TVKDNQ V +HPSTVL H EWV+YNEFVLT+KNYIRT T ++PEWL++IAP Y Sbjct: 603 G--HYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQY 660 Query: 726 YDLSNFQKGDVKLSLERIKEKV 747 YD+SNF + + K L+RI K+ Sbjct: 661 YDMSNFPQCEAKRQLDRIIAKL 682 >6I3O-A nrPDB Length = 677 Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/661 (50%), Positives = 462/661 (69%), Gaps = 29/661 (4%) Query: 90 RRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPR 149 R LPV RD+ ++ ++NQI++ VGETGSGKTTQ+ Q++ E + + CTQPR Sbjct: 9 RESLPVFQFRDQIIQAVKDNQILIVVGETGSGKTTQVTQYLA--EAGFTKYGMIGCTQPR 66 Query: 150 RVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRY 209 RVAA+SVA+RVAEE+ +LG+EVGY+IRFE+ TS T +KYMTDGML RE + D DL RY Sbjct: 67 RVAAVSVAKRVAEEVGCQLGQEVGYTIRFEDVTSPATKIKYMTDGMLQREILMDPDLKRY 126 Query: 210 SCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPG 269 S I+LDEAHERT+ATD+L LLK+ VKRRPDLK+I+ SATLDAEKF YFN P+ +PG Sbjct: 127 SVIMLDEAHERTIATDVLFALLKKTVKRRPDLKVIVTSATLDAEKFSEYFNSCPIFTIPG 186 Query: 270 RTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQ 329 RT+PVE+ Y+ E + DYL++A+ TV+QIH TE GDIL+FLTG++EI+ A +I E Sbjct: 187 RTFPVEILYSREPEPDYLEAALTTVMQIHLTEPPGDILVFLTGQEEIDTAC-EILYE--- 242 Query: 330 LVREEGCGP----LSVYPLYGSLPPHQQQRIFEPAPESHNGRPG-RKVVISTNIAETSLT 384 R + GP L + P+Y +LP Q RIFEPAP PG RKVVI+TNIAETS+T Sbjct: 243 --RMKALGPSVPELIILPIYSALPSEMQSRIFEPAP------PGSRKVVIATNIAETSIT 294 Query: 385 IDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEA 444 ID I YVVDPGF KQ Y+P++ ++SL+V+PIS+A A QRAGRAGRT PGKCFRLYTE A Sbjct: 295 IDYIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAA 354 Query: 445 FQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACL 504 +Q E++ + P+I R NL++T+L LK +GI+DL+ FDFMDPP TM+ ALEEL L L Sbjct: 355 YQSEMLPTTIPDIQRQNLANTILLLKAMGINDLLRFDFMDPPPVNTMLTALEELYALGAL 414 Query: 505 DDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKR 564 DDEG LT LGR + FP++P L+ +LI S + CS E++TIV+ML++ +F RP +++ Sbjct: 415 DDEGLLTRLGRKMADFPMEPSLSKVLIASVDKGCSDEMVTIVSMLNLQQIFYRPKDKQQQ 474 Query: 565 ADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLE 624 AD K F P GDH+TLLNVY+A+K + Y + WC ++Y+ R++ A ++R Q+ Sbjct: 475 ADQKKAKFHDPTGDHLTLLNVYNAWK-NSGYS---NAWCFENYIQARAMRRARDVRQQIV 530 Query: 625 RLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDNQDVLIHPS 684 ++M R+ + + ++ D IR+AL +GFF A+K +GY T+ + V +HPS Sbjct: 531 KIMERHRHPIISCGRDT----DKIRQALCAGFFRNTARK-DPQEGYKTLTEGTPVYLHPS 585 Query: 685 TVL-GHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSNFQKGDVKLSLERI 743 + L G AEWV+Y+E VLT+K Y+ T++ P+WL+E AP ++ L+ + + ERI Sbjct: 586 SALFGKQAEWVLYHELVLTTKEYMHFTTAIEPKWLVEAAPTFFKLAPTDRLSKRKKAERI 645 Query: 744 K 744 + Sbjct: 646 Q 646 >6FA9-A nrPDB Length = 655 Score = 601 bits (1549), Expect = e-172, Method: Compositional matrix adjust. Identities = 322/649 (49%), Positives = 434/649 (66%), Gaps = 30/649 (4%) Query: 86 ILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVAC 145 I ++R+ LPV+A RD FL + Q+++ VGETGSGKTTQIPQ+ L + N ++AC Sbjct: 24 IQEVRKSLPVYAYRDAFLDAVKEYQVLILVGETGSGKTTQIPQY-LHEAGYTKGNRKIAC 82 Query: 146 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 205 TQPRRVAAMSVA RVA+EM V+LG EVGYSIRFE+ TS KTILKYMTDGMLLRE + D Sbjct: 83 TQPRRVAAMSVAARVADEMGVRLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREMVTSPD 142 Query: 206 LSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLL 265 L+ YSCI++DEAHERT+ TDIL+ L+K + + RP+L++II SATL+AEKF YF+DAP+ Sbjct: 143 LADYSCIMIDEAHERTVHTDILLALIKDLTRARPELRLIISSATLNAEKFSAYFDDAPIF 202 Query: 266 AVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISL 325 VPGR +PVE+YYT + +YL++A+ TV QIHAT+ GDIL+FLTG++EIE A ++ Sbjct: 203 NVPGRVHPVEVYYTSAPESNYLEAALVTVFQIHATQPEGDILVFLTGQEEIERACERV-- 260 Query: 326 EGDQLVREEG--CGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPG-RKVVISTNIAETS 382 +++ R+ G + P+Y ++P Q +IFEP P PG RKVV STNIAETS Sbjct: 261 --EEIRRKLGKRVPEIIALPIYSNMPSEMQAKIFEPTP------PGARKVVFSTNIAETS 312 Query: 383 LTIDGIVYVVDPGFSKQKVYNP--RIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLY 440 LTIDGIVYV+D G+ K+ ++P +L V P S+A+A QR GRAGR +PGKCFRLY Sbjct: 313 LTIDGIVYVIDSGYVKENTFSPVGTTGQSTLAVVPCSRAAANQRMGRAGRVKPGKCFRLY 372 Query: 441 TEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNY 500 T+ A+ E+ E PEI R++LSS VL+LK LGIDDL+ FDF+DPP E ++++L L Sbjct: 373 TKYAYLSEMDESPTPEIQRTSLSSVVLQLKALGIDDLLGFDFLDPPPTELLIKSLNMLYA 432 Query: 501 LACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLS-VPNVFIRPT 559 L L+ G LT +GR +FP +PMLA LI + + C E+LTIV+ML V +F RP Sbjct: 433 LGALNSAGQLTRVGRQMGEFPTEPMLAKALIAATQEGCVSEVLTIVSMLGEVGTLFFRPK 492 Query: 560 KDKKRADDAKNIFAHPD-GDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADN 618 K AD A+ F D GDH+TLLN+Y+ + E W R+++L RSL+ A + Sbjct: 493 DKKVHADSARARFTVRDGGDHLTLLNIYNQWVEAEYSPI----WARENFLAQRSLTRARD 548 Query: 619 IRSQLERLMNRY--NLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDN 676 +R QL +L +R E + +P I +AL + FF+ A+ GY T+K+N Sbjct: 549 VRDQLAKLCDRILDGSEASCGGVNNPT---PILRALTAAFFLNAARLNRAGDGYRTLKNN 605 Query: 677 QDVLIHPSTVL-GHD--AEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIA 722 V +HPS+V+ G D + +IY+E V+TSK Y+R+V V P WL E Sbjct: 606 ITVYVHPSSVVRGMDPPPKVIIYHELVVTSKEYVRSVIPVEPRWLSEFG 654 >5GM6-Y nrPDB Length = 876 Score = 533 bits (1372), Expect = e-151, Method: Compositional matrix adjust. Identities = 290/673 (43%), Positives = 432/673 (64%), Gaps = 49/673 (7%) Query: 82 KYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENT 141 + + I + R+ LPVH +DE L+ + NQ+++ +GETGSGKTTQ+PQ+++ D Sbjct: 212 RILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKL 271 Query: 142 QVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTS-NKTILKYMTDGMLLREA 200 Q+A TQPRRVAA SVA RVA+EM+V LG+EVGY IRFE+KT+ NKT+LKYMTDGMLLRE Sbjct: 272 QIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREF 331 Query: 201 MEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFN 260 + D LS+YSCI++DEAHERTLATDIL+GLLK ++ +RP LK++I SAT++A+KF +F+ Sbjct: 332 LTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFD 391 Query: 261 DAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEA-GDILLFLTGEDEIEDA 319 + P+ VPGR YPV+++YT + + +Y+ +AI T+ QIH T+ GDIL+FLTG++EIE Sbjct: 392 NCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIERT 451 Query: 320 VRKISLEGDQLVREEG--CGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTN 377 K+ ++++ + G + + P+Y +LP QQ +IF+P PE+ RKVV++TN Sbjct: 452 KTKL----EEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPEN-----CRKVVLATN 502 Query: 378 IAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCF 437 IAETSLTIDGI YV+DPGF K+ Y P + LL P S+AS QRAGRAGR PGKCF Sbjct: 503 IAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCF 562 Query: 438 RLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEE 497 R++T+ ++ EL PEI R+NLS+TVL L LG+ DL+ F MD P+ T+ ++LE Sbjct: 563 RIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLEN 622 Query: 498 LNYLACLDDEGNLTPLGRLASQFPLDPMLA-VMLIGSFEFQCS---QEILTIVAML-SVP 552 L L L+ +G +T LG++ +FP +P A V+ + QC +E LTIV+ML P Sbjct: 623 LYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETP 682 Query: 553 NVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRS 612 ++FI ++ D A ++ + + DHI L +++ +++ + WC+DH + +++ Sbjct: 683 SLFI-----GQKRDAAASVLSEVESDHILYLEIFNQWRNSKFS----RSWCQDHKIQFKT 733 Query: 613 LSAADNIRSQLERLMNRYNLELNTTDYESPK------YFD-NIRKALASGFFMQVAKKRS 665 + NIR+QL R + L + D K Y + I + SGF M + + Sbjct: 734 MLRVRNIRNQLFRCSEKVGL-VEKNDQARMKIGNIAGYINARITRCFISGFPMNIVQ--L 790 Query: 666 GAKGYITVKDNQ---DVLIHPSTVL--GHD------AEWVIYNEFVLTSKNYIRTVTSV- 713 G GY T+ + +V +HP+++L H +++V+Y + +LTSK +IR + Sbjct: 791 GPTGYQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLVIP 850 Query: 714 RPEWLIEIAPAYY 726 + EWLI++ P + Sbjct: 851 KEEWLIDMVPQIF 863 >5VHD-D nrPDB Length = 870 Score = 332 bits (852), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 236/728 (32%), Positives = 372/728 (51%), Gaps = 102/728 (14%) Query: 82 KYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVL--FDEMPHLE 139 +Y+++ + R +LP + + E + + N+Q+ V GETG GKTTQ+ QF+L + E Sbjct: 49 RYIEMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGS 108 Query: 140 NTQVACTQPRRVAAMSVAQRVAEEM--DVKLGEEVGYSIRFENKTSNK--TILKYMTDGM 195 ++ CTQPRR++A+SVA+RVA E G GY IR +++ K +IL Y T G+ Sbjct: 109 ACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSIL-YCTTGI 167 Query: 196 LLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKF 255 +L+ D LS S I+LDE HER L +D+LM ++K ++ RPDLK+++MSATL+AEKF Sbjct: 168 ILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKF 227 Query: 256 QRYFNDAPLLAVPGRTYPVELY----------YTPEFQRDYLDSAIRTVLQIHATEE--- 302 YF + P++ +PG T+PV Y Y PE Q+++ + +Q H + Sbjct: 228 SEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPE-QKEHRSQFKKGFMQGHVNRQEKY 286 Query: 303 ----------------------AGDILLFLTGEDE------IEDAVRKISLE---GDQLV 331 A + + +DE I +R I LE G LV Sbjct: 287 YYEAIYKERWPGYLRELRQRYSASTVDVVEMMDDEKVDLNLIAALIRYIVLEEEDGAILV 346 Query: 332 REEGCGPLS------------------VYPLYGSLPPHQQQRIFEPAPESHNGRPG-RKV 372 G +S + PL+ +P Q ++F+ P PG RK+ Sbjct: 347 FLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKRTP------PGVRKI 400 Query: 373 VISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTR 432 VI+TNIAETS+TID +VYV+D G K+ ++ + + ++ +SKA+A+QR GRAGR + Sbjct: 401 VIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQ 460 Query: 433 PGKCFRLYTEEAFQKELIEQ-SYPEILRSNLSSTVLELKKLGIDDLVHF--DFMDPPAPE 489 PG C+ LY + + L++ PEILR+ L L++K L + + HF MDPP+ E Sbjct: 461 PGHCYHLYN--SLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHFLSRLMDPPSNE 518 Query: 490 TMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAML 549 ++ +++ L L LD + LTPLG ++ P++P + M++ F C +LTI A L Sbjct: 519 AVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASL 578 Query: 550 SVPNVFIRPTKDKKRADDAKNIFAH-PDGDHITLLNVYHAFKSDEAYEYGIHK-WCRDHY 607 S + F+ P +K AD + A DH+T++N + ++ + + K +C +++ Sbjct: 579 SFKDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFKGWEKAKQRGFRYEKDYCWEYF 638 Query: 608 LNYRSLSAADNIRSQL-ERLMNR-YNLELNTTDYESPKYFDN---IRKALASGFFMQVA- 661 L+ +L N++ Q E L+ + N D ES DN I+ + +G + +VA Sbjct: 639 LSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPQDPESNINSDNEKIIKAVICAGLYPKVAK 698 Query: 662 ------KKRSGAKGYITVKDNQDVLIHPSTVLGHDAE----WVIYNEFVLTSKNYIRTVT 711 KKR K Y K + V IHP +V E W+IY+ + TS Y+ T Sbjct: 699 IRLNLGKKRKMVKVY--TKTDGVVAIHPKSVNVEQTEFNYNWLIYHLKMRTSSIYLYDCT 756 Query: 712 SVRPEWLI 719 V P L+ Sbjct: 757 EVSPYCLL 764 >5N8S-A nrPDB Length = 944 Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 235/753 (31%), Positives = 365/753 (48%), Gaps = 110/753 (14%) Query: 87 LKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPH--LENTQVA 144 L+ R++LP D+ ++ + NQ+++ VG TG GKTTQ+PQ +L D + + ++ Sbjct: 147 LEARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRII 206 Query: 145 CTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFEN-KTSNKTILKYMTDGMLLREAMED 203 CTQPRR++A+++A+ V+ E LG VGY IR E+ K + + Y T G+LL++ D Sbjct: 207 CTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSD 266 Query: 204 HDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAP 263 + S +ILDE HER++ TD+LMGLLK ++ RPDLK+I+MSAT+ + F YFN+ P Sbjct: 267 PLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCP 326 Query: 264 LLAVPGRTYPVELYYTP--------EFQ-----------------------------RDY 286 + + G +PV++ Y EFQ R+ Sbjct: 327 MFRIEGVMFPVKMLYLEDVLSKTNYEFQKFRDRRPKRDPPERRMKHEAMIEPYLRRIRNS 386 Query: 287 LDSAIRTVLQ-------------------IHATEEAGDILLFLTGEDEIE---DAVRKIS 324 DS + L+ I E G IL+FL G D+I + + K Sbjct: 387 YDSRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLYNILDKPK 446 Query: 325 LEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLT 384 Q R+ ++V+PL+ + +QQ +F P RKV+IST IAETS+T Sbjct: 447 TSKGQRWRDH----MAVFPLHSLMQSGEQQAVFRRPPAGQ-----RKVIISTIIAETSVT 497 Query: 385 IDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEA 444 ID +VYV++ G +K Y+ ++SL ++KA+ QQR GRAGR RPG C+ L++ A Sbjct: 498 IDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRRGRAGRVRPGICYNLFS-RA 556 Query: 445 FQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF--DFMDPPAPETMMRALEELNYLA 502 + + + PEILRS L S +L LK L IDD F ++ P PE + +E L + Sbjct: 557 REDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTLINAPNPEAIKMGVELLKRIE 616 Query: 503 CLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDK 562 LD G LTPLG ++ P+DP + M++ S F C I + A LS + F P + Sbjct: 617 ALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLGKE 676 Query: 563 KRADDAKNIFA-HPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRS 621 R D+ K A + DH+ + N A++ D Y + +C ++L+ +L + +++ Sbjct: 677 SRVDEIKRRMARNMRSDHLMVHNTIIAYR-DSRYSHAERDFCYKNFLSSMTLQQLERMKN 735 Query: 622 QLERLMNRYNL--ELNTTDYESPKYFDNI---RKALASGFFMQVA--------KKRSGAK 668 Q L+ Y N D S K + I R + +G + +A K R A Sbjct: 736 QFSELLYNYKFLASSNCKDAASNKNSEKIPLLRAIIGAGLYPNMAHLRKSRQIKNRVRAI 795 Query: 669 GYITVKDNQDVLIHPSTV----LGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLI----- 719 + D + V HPS+V G D+ + +Y + ++ ++ T V P LI Sbjct: 796 HTMATDDGRRVNFHPSSVNSGESGFDSAYFVYFQRQKSTDLFLLDSTMVFPMALIIFGDG 855 Query: 720 ------------EIAPAYYDLSNFQKGDVKLSL 740 +A YY N + DV + L Sbjct: 856 VEAGVTQNTPYLCVAKTYYFKCNRETADVVIQL 888 >6HEG-A nrPDB Length = 809 Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 164/442 (37%), Positives = 242/442 (54%), Gaps = 19/442 (4%) Query: 93 LPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVA 152 LPV A E L ++ TG+GK+T +P +L P + N ++ +PRR+A Sbjct: 4 LPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAH--PGI-NGKIILLEPRRLA 60 Query: 153 AMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCI 212 A +VAQR+AE ++ K G+ VGY +R +N T L+ +T+G+L R D +LS + Sbjct: 61 ARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGLV 120 Query: 213 ILDEAHERTLATDILMGLLKQVVKR-RPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRT 271 ILDE HER+L D+ + LL V + R DLK++IMSATLD ++ Q+ +AP++ GR+ Sbjct: 121 ILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRS 180 Query: 272 YPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLV 331 +PVE Y P D A+ +E+G +LLFL G EI+ +QL Sbjct: 181 FPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLFLPGVGEIQRV-------QEQLA 233 Query: 332 REEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYV 391 G L + PLYG+L + Q++ PAP+ RKVV++TNIAETSLTI+GI V Sbjct: 234 SRIGSDVL-LCPLYGALSLNDQRKAILPAPQGM-----RKVVLATNIAETSLTIEGIRLV 287 Query: 392 VDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIE 451 VD + ++PR + L+ +S+AS QRAGRAGR PG L +E ++ Sbjct: 288 VDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGISLHLIAKEQAERA-AA 346 Query: 452 QSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDEGNLT 511 QS PEIL+S+LS ++EL + G D ++D P ++ A L L L+ E L+ Sbjct: 347 QSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPVVNLLAAKRLLQMLGALEGE-RLS 405 Query: 512 PLGRLASQFPLDPMLAVMLIGS 533 G+ + DP LA ML+ + Sbjct: 406 AQGQKMAALGNDPRLAAMLVSA 427 >3I4U-A nrPDB Length = 270 Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 111/253 (43%), Positives = 162/253 (64%), Gaps = 11/253 (4%) Query: 489 ETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAM 548 ET++ A+E+L L LDDEG LT LGR ++FPL+PML MLI S CS+E+LTIV+M Sbjct: 18 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 77 Query: 549 LSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYL 608 LSV NVF RP + AD K F +GDH+TLL VY+++K+++ + WC ++++ Sbjct: 78 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFS----NPWCYENFI 133 Query: 609 NYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAK 668 RSL A +IR Q+ +M+R+ L++ + + + ++KA+ SGFF AKK + Sbjct: 134 QARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVR----VQKAICSGFFRNAAKK-DPQE 188 Query: 669 GYITVKDNQDVLIHPSTVL-GHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYD 727 GY T+ D Q V IHPS+ L EWV+Y+E VLT+K Y+R VT++ P WL+E APA++ Sbjct: 189 GYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFK 248 Query: 728 LSNFQ-KGDVKLS 739 + +GD LS Sbjct: 249 VLEVDLQGDHGLS 261 >3LLM-A nrPDB Length = 235 Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 72/185 (38%), Positives = 111/185 (60%), Gaps = 5/185 (2%) Query: 86 ILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVL--FDEMPHLENTQV 143 IL+ R LPV E L+ N +++ G TG GKTTQ+PQF+L F + + Sbjct: 53 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 112 Query: 144 ACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSN-KTILKYMTDGMLLREAME 202 TQPRR++A+SVA+RVA E + G+ GYS+RFE+ + + T G+LLR+ Sbjct: 113 VVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-- 170 Query: 203 DHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDA 262 + + S +I+DE HER + TD L+ +L+ VV+ P+++I++MSAT+D F YF + Sbjct: 171 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNC 230 Query: 263 PLLAV 267 P++ V Sbjct: 231 PIIEV 235 >4CBI-A nrPDB Length = 516 Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 100/416 (24%), Positives = 176/416 (42%), Gaps = 101/416 (24%) Query: 118 TGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIR 177 TG+GKTT++P+ V+ + H +V P R AA SV Q + ++ + +++R Sbjct: 53 TGAGKTTELPRSVIEEIGRH---KRVLVLIPLRAAAESVYQYMRQKH-----PSIAFNLR 104 Query: 178 F-ENKTSN-KTILKYMTDGML-------LREAMEDHDLSRYSCIILDEAHERTLATDILM 228 E K + T + Y + G LR AM + YS I LDE H AT + Sbjct: 105 IGEMKEGDMATGITYASYGYFCQMSQPKLRAAMVE-----YSFIFLDEYH---CATPEQL 156 Query: 229 GLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQR---- 284 ++ ++ + +L+++ M+AT A + G+ +P+E + PE + Sbjct: 157 AIMGKIHRFSENLRVVAMTAT-----------PAGTVTTTGQKHPIEEFIAPEVMKGEDL 205 Query: 285 --DYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVY 342 +YLD A L+I E ++L+F+ + +A +K+ +G S Y Sbjct: 206 GSEYLDIA---GLKIPVEEMKNNMLVFVPTRNMAVEAAKKLKAKGYN----------SGY 252 Query: 343 PLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVY 402 Y P + + +P VV++TN E+ +T+ + VVD G +K Sbjct: 253 -YYSGEDPSNLRVVTSQSP---------YVVVATNAIESGVTLPDLDVVVDTGLKCEK-- 300 Query: 403 NPRIR--------VESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSY 454 RIR V L ++ QR GR GR +PG+ +R Q Sbjct: 301 --RIRLSPKMPFIVTGLKRMAVTIGEQAQRRGRVGRVKPGRYYR------------SQET 346 Query: 455 PEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDEGNL 510 P + + +L+ ++ GI+D ++ + ++ E+NY L +E +L Sbjct: 347 P-VGSKDYHYDLLQAQRYGIEDGIN-----------ITKSFREMNYDWSLYEEDSL 390 >5WX1-A nrPDB Length = 733 Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 99/416 (23%), Positives = 179/416 (43%), Gaps = 101/416 (24%) Query: 118 TGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIR 177 TG+GKTT++P+ V+ + H +V P R AA SV Q + ++ + +++R Sbjct: 278 TGAGKTTELPRSVIEEIGRH---KRVLVLIPLRAAAESVYQYMRQKH-----PSIAFNLR 329 Query: 178 F-ENKTSN-KTILKYMTDGML-------LREAMEDHDLSRYSCIILDEAHERTLATDILM 228 E K + T + Y + G LR AM + YS I LDE H AT + Sbjct: 330 IGEMKEGDMATGITYASYGYFCQMPQPKLRAAMVE-----YSFIFLDEYH---CATPEQL 381 Query: 229 GLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQR---- 284 ++ ++ + +L+++ M+AT A + G+ +P+E + PE + Sbjct: 382 AIMGKIHRFSENLRVVAMTAT-----------PAGTVTTTGQKHPIEEFIAPEVMKGEDL 430 Query: 285 --DYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVY 342 +YLD A L+I E ++L+F+ + + +K+ +G S Y Sbjct: 431 GSEYLDIA---GLKIPVEEMKSNMLVFVPTRNMAVETAKKLKAKGYN----------SGY 477 Query: 343 PLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVY 402 Y P + + +P VV++TN E+ +T+ + VVD G +K Sbjct: 478 -YYSGEDPSNLRVVTSQSP---------YVVVATNAIESGVTLPDLDVVVDTGLKCEK-- 525 Query: 403 NPRIRVES---LLVSPISKASAQ-----QRAGRAGRTRPGKCFRLYTEEAFQKELIEQSY 454 RIR+ S +V+ + + + QR GR GR +PG+ +R Q Sbjct: 526 --RIRLSSKMPFIVTGLKRMAVTIGEQAQRRGRVGRVKPGRYYR------------SQET 571 Query: 455 PEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDEGNL 510 P + + +L+ ++ GI+D ++ + ++ E+NY L +E +L Sbjct: 572 P-VGSKDYHYDLLQAQRYGIEDGIN-----------ITKSFREMNYDWSLYEEDSL 615 >5WSO-A nrPDB Length = 476 Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 84/344 (24%), Positives = 149/344 (43%), Gaps = 77/344 (22%) Query: 118 TGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIR 177 TG+GKTT++P+ V+ + H +V P R AA SV Q M +K + +++R Sbjct: 21 TGAGKTTELPKAVIEEIGRH---KRVLVLIPLRAAAESVYQY----MRLK-HPSISFNLR 72 Query: 178 FENKTSN--KTILKYMTDGML-------LREAMEDHDLSRYSCIILDEAHERTLATDILM 228 + T + Y + G LR AM + YS I LDE H AT + Sbjct: 73 IGDMKEGDMATGITYASYGYFCQMPQPKLRAAMVE-----YSYIFLDEYH---CATPEQL 124 Query: 229 GLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQR---- 284 ++ ++ + ++++ M+AT A + G+ +P+E + PE + Sbjct: 125 AIIGKIHRFSESIRVVAMTAT-----------PAGSVTTTGQKHPIEEFIAPEVMKGEDL 173 Query: 285 --DYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVY 342 +LD A L+I E G++L+F+ + + +K+ +G S Y Sbjct: 174 GSQFLDIA---GLKIPVDEMKGNMLVFVPTRNMAVEVAKKLKAKGYN----------SGY 220 Query: 343 PLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVY 402 Y P + + +P V+++TN E+ +T+ + V+D G +K Sbjct: 221 -YYSGEDPANLRVVTSQSP---------YVIVATNAIESGVTLPDLDTVIDTGLKCEK-- 268 Query: 403 NPRIRVES---LLVSPISKASAQ-----QRAGRAGRTRPGKCFR 438 R+RV S +V+ + + + QR GR GR +PG+ +R Sbjct: 269 --RVRVSSKIPFIVTGLKRMAVTVGEQAQRRGRVGRVKPGRYYR 310 >2Z83-A nrPDB Length = 459 Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust. Identities = 85/343 (24%), Positives = 128/343 (37%), Gaps = 78/343 (22%) Query: 105 LYQNNQIMVFVGETGSGKTTQI-PQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEE 163 + + Q+ V GSGKT +I PQ + + A Q R A ++ + VA E Sbjct: 17 MLRKRQMTVLDLHPGSGKTRKILPQII-----------KDAIQQRLRTAVLAPTRVVAAE 65 Query: 164 MDVKLGEEVGYSIRFENKTSNKT-----ILKYMTDGMLLREAMEDHDLSRYSCIILDEAH 218 M L G +R++ + I+ M L M + + Y+ ++DEAH Sbjct: 66 MAEAL---RGLPVRYQTSAVQREHQGNEIVDVMCHATLTHRLMSPNRVPNYNLFVMDEAH 122 Query: 219 ERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYY 278 A+ G + V+ + I M+AT PG T P Sbjct: 123 FTDPASIAARGYIATKVE-LGEAAAIFMTAT-----------------PPGTTDPFPDSN 164 Query: 279 TP--EFQRDYLDSAIRTVLQIHATEEAGDILLFLTG---EDEIEDAVRKISLEGDQLVRE 333 P + Q + D A + + TE AG + F+ +EI +++ + QL R+ Sbjct: 165 APIHDLQDEIPDRAWSSGYE-WITEYAGKTVWFVASVKMGNEIAMCLQRAGKKVIQLNRK 223 Query: 334 EGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVD 393 S Y P+ NG VI+T+I+E G V+D Sbjct: 224 ------SYDTEY---------------PKCKNG--DWDFVITTDISEMGANF-GASRVID 259 Query: 394 PGFSKQKVYNPRI------RVESLLVSPISKASAQQRAGRAGR 430 +K P I RV SPI+ ASA QR GR GR Sbjct: 260 ----CRKSVKPTILEEGEGRVILGNPSPITSASAAQRRGRVGR 298 >2QEQ-A nrPDB Length = 434 Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 21/146 (14%) Query: 110 QIMVFVGETGSGKTTQI-PQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKL 168 QI V G+GKT +I PQ + + A + R A ++ + VA EM L Sbjct: 3 QITVLDLHPGAGKTRRILPQII-----------KEAINRRLRTAVLAPTRVVAAEMAEAL 51 Query: 169 GEEVGYSIRFENKT-----SNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLA 223 G IR++ + I+ M L M H + Y+ ++DEAH A Sbjct: 52 ---RGLPIRYQTSAVAREHNGNEIVDVMCHATLTHRLMSPHRVPNYNLFVMDEAHFTDPA 108 Query: 224 TDILMGLLKQVVKRRPDLKIIIMSAT 249 + G + V+ + I M+AT Sbjct: 109 SIAARGYISTRVE-LGEAAAIFMTAT 133 >1QON-A nrPDB Length = 585 Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 9/82 (10%) Query: 349 PPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRV 408 PP + R +P P P V+ +T ++ T + Y PGFS ++++NP V Sbjct: 37 PPVEDLRFRKPVP----AEPWHGVLDATGLSATCVQER---YEYFPGFSGEEIWNPNTNV 89 Query: 409 --ESLLVSPISKASAQQRAGRA 428 + L ++ + A A+ R GR Sbjct: 90 SEDCLYINVWAPAKARLRHGRG 111 >5OVO-B nrPDB Length = 99 Score = 33.1 bits (74), Expect = 0.43, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Query: 379 AETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISK--ASAQQRAGRAGRTRPGKC 436 A TSL I G+ GF +QK + P+++VE + + A Q+A GR GK Sbjct: 19 ALTSLGIQGLTVSEVKGFGRQKGFLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKI 78 Query: 437 FRLYTEEAFQ 446 F L +A + Sbjct: 79 FVLDIAQAVR 88 >4B0Z-A nrPDB Length = 229 Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust. Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 538 CSQEILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAH 574 C +E+L + L+ N+F+ PT DK++A A+N+F + Sbjct: 26 CKKELLKLKVELAKQNLFV-PTSDKEKASFARNVFEY 61 >5GJU-A nrPDB Length = 205 Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust. Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 19/125 (15%) Query: 108 NNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVK 167 N + ++ + +TGSGKT +L + P L+ Q+ P R A+ VA+ + + Sbjct: 37 NGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHM 96 Query: 168 LGEEV-------GYSIRFENKTSNKTILKYMTDGMLLREAMEDH------DLSRYSCIIL 214 G V Y ++ I+ T G LL DH DLS+ S ++L Sbjct: 97 RGVNVVALYGGQRYDVQLRALRQGPQIV-VGTPGRLL-----DHLKRGTLDLSKLSGLVL 150 Query: 215 DEAHE 219 DEA E Sbjct: 151 DEADE 155 >2V8O-A nrPDB Length = 444 Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust. Identities = 79/341 (23%), Positives = 129/341 (37%), Gaps = 72/341 (21%) Query: 104 KLYQNNQIMVFVGETGSGKTTQI-PQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAE 162 ++ + Q+ V G+GKT +I PQ + + A + R A ++ + VA Sbjct: 7 EMLKKRQLTVLDLHPGAGKTRRILPQII-----------KDAIQKRLRTAVLAPTRVVAA 55 Query: 163 EMDVKLGEEVGYSIRF-----ENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEA 217 EM L G +R+ + + S I+ M L M + Y+ ++DEA Sbjct: 56 EMAEAL---RGLPVRYLTPAVQREHSGNEIVDVMCHATLTHRLMSPLRVPNYNLFVMDEA 112 Query: 218 HERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELY 277 H A+ G + V+ + I M+AT PG + P Sbjct: 113 HFTDPASIAARGYIATRVE-AGEAAAIFMTAT-----------------PPGTSDPFPDT 154 Query: 278 YTP--EFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEG 335 +P + + D A + + T+ AG + F+ A K+S E Q ++ G Sbjct: 155 NSPVHDVSSEIPDRAWSSGFE-WITDYAGKTVWFV--------ASVKMSNEIAQCLQRAG 205 Query: 336 CGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPG 395 + + ++ P+ NG VI+T+I+E G V+D Sbjct: 206 KRVIQL----------NRKSYDTEYPKCKNG--DWDFVITTDISEMGANF-GASRVID-- 250 Query: 396 FSKQKVYNPRI------RVESLLVSPISKASAQQRAGRAGR 430 +K P I RV + S I+ ASA QR GR GR Sbjct: 251 --CRKSVKPTILDEGEGRVILSVPSAITSASAAQRRGRVGR 289 >4NHO-A nrPDB Length = 488 Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 7/85 (8%) Query: 94 PVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQ--IPQFVLFDEMPHLENTQVACTQPRRV 151 P QR QN I + V ETGSGKT IP V +P ++ + + P + Sbjct: 82 PTPIQRQAIPIGLQNRDI-IGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAI 140 Query: 152 ---AAMSVAQRVAEEMDVKLGEEVG 173 +AQ++ EE +K G+ +G Sbjct: 141 ILAPTRELAQQIEEET-IKFGKPLG 164 >3JCR-F nrPDB Length = 820 Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 6/71 (8%) Query: 108 NNQIMVFVGETGSGKTTQ--IPQFVLFDEMPHLENTQVACTQPRRV---AAMSVAQRVAE 162 N+ ++ V ETGSGKT IP V +P ++ + + P + +AQ++ E Sbjct: 427 QNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEE 486 Query: 163 EMDVKLGEEVG 173 E +K G+ +G Sbjct: 487 ET-IKFGKPLG 496 >3S61-A nrPDB Length = 463 Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Query: 63 AQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMV 113 A L+ +PF F PK+ D++ R HA+R+ L+ Y N V Sbjct: 261 ASALKPADDSPFVNEVFAPKFTDLIYSRE----HAERERLLREYHNTNYSV 307 >1UIR-A nrPDB Length = 314 Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust. Identities = 32/150 (21%), Positives = 67/150 (44%), Gaps = 16/150 (10%) Query: 601 KWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQV 660 +W + + + R++ D+ R+ LER RY++ + D P DN + L + F ++ Sbjct: 123 EWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI--IDLTDPVGEDNPARLLYTVEFYRL 180 Query: 661 AKKRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIE 720 K G + ++ +L H H V++ V + Y+R+ + P + + Sbjct: 181 VKAHLNPGGVMGMQTGMILLTH------HRVHPVVHRT-VREAFRYVRSYKNHIPGFFLN 233 Query: 721 ----IAPAYYDLSNFQKGDVKLSLERIKEK 746 +A +D + F +G ++ RI+E+ Sbjct: 234 FGFLLASDAFDPAAFSEGVIE---ARIRER 260 >2WV9-A nrPDB Length = 673 Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust. Identities = 87/356 (24%), Positives = 134/356 (37%), Gaps = 76/356 (21%) Query: 90 RRELPV-HAQRDEFLKLYQNNQIMVFVGETGSGKTTQI-PQFVLFDEMPHLENTQVACTQ 147 R E PV A E LK Q+ V G+GKT +I PQ + + A + Sbjct: 224 RVEEPVPEAYNPEMLK---KRQLTVLDLHPGAGKTRRILPQII-----------KDAIQK 269 Query: 148 PRRVAAMSVAQRVAEEMDVKLGEEVGYSIRF-----ENKTSNKTILKYMTDGMLLREAME 202 R A ++ + VA EM L G +R+ + + S I+ M L M Sbjct: 270 RLRTAVLAPTRVVAAEMAEAL---RGLPVRYLTPAVQREHSGNEIVDVMCHATLTHRLMS 326 Query: 203 DHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDA 262 + Y+ ++DEAH A+ G + V+ + I M+AT Sbjct: 327 PLRVPNYNLFVMDEAHFTDPASIAARGYIATRVEAG-EAAAIFMTAT------------- 372 Query: 263 PLLAVPGRTYPVELYYTP--EFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAV 320 PG + P +P + + D A + + T+ AG + F+ A Sbjct: 373 ----PPGTSDPFPDTNSPVHDVSSEIPDRAWSSGFE-WITDYAGKTVWFV--------AS 419 Query: 321 RKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAE 380 K+S E Q ++ G + + ++ P+ NG VI+T+I+E Sbjct: 420 VKMSNEIAQCLQRAGKRVIQL----------NRKSYDTEYPKCKNGD--WDFVITTDISE 467 Query: 381 TSLTIDGIVYVVDPGFSKQKVYNPRI------RVESLLVSPISKASAQQRAGRAGR 430 G V+D +K P I RV + S I+ ASA QR GR GR Sbjct: 468 MGANF-GASRVID----CRKSVKPTILDEGEGRVILSVPSAITSASAAQRRGRVGR 518 >6C2V-A nrPDB Length = 115 Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 7/55 (12%) Query: 111 IMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMD 165 I+V VG +G+GKTT DE+ +V + R V A+RVAEE + Sbjct: 4 IVVIVGPSGAGKTT-------LDELARKAKEEVPDAEIRTVTTKEDAKRVAEEAE 51 >2V6J-A nrPDB Length = 431 Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust. Identities = 74/340 (21%), Positives = 130/340 (38%), Gaps = 84/340 (24%) Query: 119 GSGKTTQI-PQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGY-SI 176 G+GKT ++ PQ V L +A P RV A +E + GE + Y + Sbjct: 12 GAGKTRRVLPQLVREAVKKRLRTVILA---PTRVVA-------SETYEALRGEPIRYMTP 61 Query: 177 RFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVK 236 +++ + I+ +M + ++ + Y+ I+DEAH A+ G ++ V Sbjct: 62 AVQSERTGNEIVDFMCHSTFTMKLLQGVRVPNYNLYIMDEAHFLDPASVAARGYIETRVS 121 Query: 237 RRPDLKIIIMSATLDAEKFQRYFNDAPLL----AVPGRTYPVELYYTPEFQRDYLDSAIR 292 D I M+AT +++P++ +P + + + EF R Sbjct: 122 -MGDAGAIFMTATPPGTTEAFPPSNSPIIDEETRIPDKAWNSGYEWITEFDG-------R 173 Query: 293 TVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQ 352 TV +H+ ++ +I L + A +K+ LY Sbjct: 174 TVWFVHSIKQGAEIGTCL------QKAGKKV--------------------LY------L 201 Query: 353 QQRIFE---PAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVE 409 ++ FE P +S VI+T+I+E + F +V +PR ++ Sbjct: 202 NRKTFESEYPKCKSEKW----DFVITTDISE-----------MGANFKADRVIDPRKTIK 246 Query: 410 SLLVS---------PISKASAQQRAGRAGRTRPGKCFRLY 440 +L+ I+ ASA QR GR GR P K +Y Sbjct: 247 PILLDGRVSMQGPIAITPASAAQRRGRIGRN-PEKLGDIY 285 >5L3S-B nrPDB Length = 296 Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 21/154 (13%) Query: 111 IMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGE 170 +++F G G GKTT I + V + +L +T +A + R AA A +++V+L Sbjct: 103 VIIFFGVNGVGKTTTIAKVVNMLKKNNL-STIIAASDTFRAAAQEQLAYHASKLEVQL-- 159 Query: 171 EVGYSIRFENKTSNKTILKYMTD-GMLLREAMEDHDLSRYSCIILDEAHERTLATDILMG 229 IR KY D + +A+ +++D A + +D++ Sbjct: 160 -----IRG----------KYGADPASVAFDAISFAKSRNIDVVLIDTAGRMHIDSDLVEE 204 Query: 230 LLKQVVKRRPDLKIIIMS--ATLDAEKFQRYFND 261 L K + +PD +I+I+ A DA + R+F + Sbjct: 205 LKKVLRIAKPDFRILILDSLAGSDALEQARHFEN 238 >3PEW-A nrPDB Length = 395 Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust. Identities = 69/304 (22%), Positives = 126/304 (41%), Gaps = 55/304 (18%) Query: 112 MVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMD--VKLG 169 M+ ++G+GKT +L P + Q C P R A + V +EM K+ Sbjct: 47 MIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLE-VVQEMGKFTKIT 105 Query: 170 EEVGYSIRFE-NKTSNKTILKYMTDGMLL----REAMEDHDLSRYSCIILDEAHERTLAT 224 ++ FE NK N ++ T G +L R+ M+ L + +LDEA Sbjct: 106 SQLIVPDSFEKNKQINAQVI-VGTPGTVLDLMRRKLMQ---LQKIKIFVLDEAD------ 155 Query: 225 DIL--MGLLKQVVKRR----PDLKIIIMSATLDAEKFQRYFN----DAPLLAVPGRTYPV 274 ++L GL Q ++ + D ++++ SAT A+ ++Y +A L + V Sbjct: 156 NMLDQQGLGDQCIRVKRFLPKDTQLVLFSATF-ADAVRQYAKKIVPNANTLELQTNEVNV 214 Query: 275 ----ELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQL 330 +LY + + D D + +++ G ++F+ + K+ EG + Sbjct: 215 DAIKQLYMDCKNEADKFD----VLTELYGVMTIGSSIIFVATKKTANVLYGKLKSEGHE- 269 Query: 331 VREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGR-KVVISTNIAETSLTIDGIV 389 V L+G L ++ R+ + + R GR KV+I+TN+ + I + Sbjct: 270 ----------VSILHGDLQTQERDRLID------DFREGRSKVLITTNVLARGIDIPTVS 313 Query: 390 YVVD 393 VV+ Sbjct: 314 MVVN 317 >4C7O-A nrPDB Length = 298 Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 23/197 (11%) Query: 77 REFTPKYVDILKIRREL-PVHAQRDEFLKLY-QNNQIMVFVGETGSGKTTQIPQFVLFDE 134 + TP + +R EL + ++ L L Q +++ G G+GKTT + + F Sbjct: 66 KSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLR 125 Query: 135 MPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDG 194 H + V R AA+ + +AE++ V F + K + Sbjct: 126 EKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDF---------FPSDVGQKPV------- 169 Query: 195 MLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQV-VKRRPDLKIIIMSATL--D 251 ++ A+++ L Y +++D A R + +M +KQV P + ++ A D Sbjct: 170 DIVNAALKEAKLKFYDVLLVDTAG-RLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQD 228 Query: 252 AEKFQRYFNDA-PLLAV 267 A + FN+A PL V Sbjct: 229 AANTAKAFNEALPLTGV 245 >4B3F-X nrPDB Length = 646 Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust. Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Query: 97 AQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSV 156 +Q++ L ++ + G G+GKTT + + +L + +V C P +A ++ Sbjct: 193 SQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIIL---QAVKQGLKVLCCAPSNIAVDNL 249 Query: 157 AQRVA 161 +R+A Sbjct: 250 VERLA 254 >2QAG-A nrPDB Length = 361 Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust. Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 11/118 (9%) Query: 80 TPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLE 139 TP YV LP R K ++ ++ VGE+G GK+T I L D P Sbjct: 14 TPGYVGFAN----LPNQVHRKSVKKGFEFT--LMVVGESGLGKSTLINSLFLTDLYPE-R 66 Query: 140 NTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEV----GYSIRFENKTSNKTILKYMTD 193 A + R + + EE VKL V GY + KTI+ Y+ + Sbjct: 67 VIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINCRDCFKTIISYIDE 124 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5I8Q-A nrPDB 1203 0.0 5D0U-A nrPDB 1013 0.0 6ID1-V nrPDB 965 0.0 5XDR-A nrPDB 964 0.0 6I3O-A nrPDB 865 0.0 6FA9-A nrPDB 815 0.0 5GM6-Y nrPDB 761 0.0 5N8S-A nrPDB 723 0.0 5VHD-D nrPDB 706 0.0 6HEG-A nrPDB 462 e-130 3I4U-A nrPDB 337 1e-92 5WX1-A nrPDB 316 2e-86 4CBI-A nrPDB 312 5e-85 5WSO-A nrPDB 308 8e-84 3LLM-A nrPDB 238 5e-63 Sequences not found previously or not previously below threshold: 2P6R-A nrPDB 69 6e-12 2WV9-A nrPDB 64 3e-10 2V8O-A nrPDB 62 1e-09 2ZJO-A nrPDB 60 4e-09 2Z83-A nrPDB 59 1e-08 4OK6-A nrPDB 58 1e-08 4B6E-A nrPDB 58 2e-08 5K8T-A nrPDB 57 3e-08 2QEQ-A nrPDB 56 4e-08 2BMF-A nrPDB 56 8e-08 1HV8-A nrPDB 54 2e-07 6C90-A nrPDB 54 2e-07 2WZQ-A nrPDB 53 4e-07 2VSX-A nrPDB 53 4e-07 4KBG-A nrPDB 52 7e-07 2JLW-A nrPDB 52 1e-06 2V6J-A nrPDB 51 2e-06 5WDX-A nrPDB 51 2e-06 2DB3-A nrPDB 51 3e-06 1OYY-A nrPDB 49 9e-06 3FHO-A nrPDB 48 2e-05 3PEW-A nrPDB 47 3e-05 5IVL-B nrPDB 46 5e-05 1GM5-A nrPDB 46 7e-05 4BRW-A nrPDB 45 2e-04 1YKS-A nrPDB 44 2e-04 5GJU-A nrPDB 43 4e-04 5LBA-B nrPDB 43 4e-04 5LB8-A nrPDB 43 4e-04 3EIQ-A nrPDB 43 5e-04 2VA8-A nrPDB 42 6e-04 6B4I-E nrPDB 42 7e-04 6CRM-A nrPDB 42 0.001 2PL3-A nrPDB 42 0.001 2WWY-A nrPDB 42 0.001 1BR4-A nrPDB 41 0.002 6CZ5-A nrPDB 41 0.002 3MKD-A nrPDB 41 0.003 2JJ9-A nrPDB 41 0.003 1QVA-A nrPDB 41 0.003 3IUY-A nrPDB 40 0.004 3JAX-A nrPDB 40 0.004 5V9X-A nrPDB 40 0.005 6DUE-A nrPDB 40 0.005 5ZBZ-A nrPDB 39 0.008 4B3F-X nrPDB 39 0.009 2ZJ8-A nrPDB 39 0.011 3BER-A nrPDB 38 0.016 4W7S-A nrPDB 38 0.018 5ZWN-y nrPDB 37 0.021 5AGA-A nrPDB 37 0.036 2GXQ-A nrPDB 37 0.045 4CDG-A nrPDB 36 0.051 4NHO-A nrPDB 36 0.053 3BOR-A nrPDB 36 0.062 5L3S-B nrPDB 35 0.083 1WP9-A nrPDB 35 0.091 1Q0U-A nrPDB 35 0.099 2HYI-C nrPDB 35 0.10 6F4A-B nrPDB 35 0.11 2Z0M-A nrPDB 35 0.12 2PX0-A nrPDB 35 0.17 6IC4-I nrPDB 34 0.19 3RC8-A nrPDB 34 0.26 5W1A-A nrPDB 33 0.40 3DKP-A nrPDB 33 0.41 5H53-A nrPDB 33 0.45 3FTQ-A nrPDB 33 0.58 2MYS-A nrPDB 33 0.60 2OUK-A nrPDB 32 0.72 5I4E-A nrPDB 32 0.88 5FHF-A nrPDB 32 1.0 2QAG-A nrPDB 32 1.1 5V7X-A nrPDB 32 1.1 4Q4L-A nrPDB 32 1.1 4C7O-A nrPDB 32 1.2 6AIC-A nrPDB 32 1.2 3JCR-F nrPDB 32 1.3 5GAD-i nrPDB 32 1.4 5GAF-i nrPDB 32 1.4 6N9A-E nrPDB 32 1.4 2J28-9 nrPDB 32 1.4 6C2V-A nrPDB 31 1.6 5OVO-B nrPDB 31 1.6 2KBE-A nrPDB 31 1.8 3I5H-A nrPDB 31 2.1 4ON9-A nrPDB 30 2.7 6QUZ-B nrPDB 30 2.8 4Q7L-A nrPDB 30 2.8 4A7F-C nrPDB 30 2.9 5XZ2-A nrPDB 30 3.5 4BPB-A nrPDB 30 3.8 2GZA-A nrPDB 30 3.9 2V3C-C nrPDB 30 4.3 4BYF-A nrPDB 30 4.3 5YCF-B nrPDB 30 4.6 5L3S-A nrPDB 30 4.7 1QZX-A nrPDB 30 4.7 3CRV-A nrPDB 30 4.8 5FL3-A nrPDB 30 5.0 4GL2-A nrPDB 30 5.3 1C4O-A nrPDB 30 5.4 5X6K-A nrPDB 29 6.4 2D62-A nrPDB 29 6.4 1G29-1 nrPDB 29 6.6 1OFI-A nrPDB 29 7.0 3B6E-A nrPDB 29 7.5 6FRK-x nrPDB 29 7.7 5L3Q-A nrPDB 29 7.7 3JAJ-z nrPDB 29 7.7 >5I8Q-A nrPDB Length = 767 Score = 1203 bits (3113), Expect = 0.0, Method: Composition-based stats. Identities = 767/767 (100%), Positives = 767/767 (100%) Query: 1 MGSKRRFSSEHPDPVETSIPEQAAEIAEELSKQHPLPSEEPLVHHDAGEFKGLQRHHTSA 60 MGSKRRFSSEHPDPVETSIPEQAAEIAEELSKQHPLPSEEPLVHHDAGEFKGLQRHHTSA Sbjct: 1 MGSKRRFSSEHPDPVETSIPEQAAEIAEELSKQHPLPSEEPLVHHDAGEFKGLQRHHTSA 60 Query: 61 EEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGS 120 EEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGS Sbjct: 61 EEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGS 120 Query: 121 GKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFEN 180 GKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFEN Sbjct: 121 GKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFEN 180 Query: 181 KTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPD 240 KTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPD Sbjct: 181 KTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPD 240 Query: 241 LKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHAT 300 LKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHAT Sbjct: 241 LKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHAT 300 Query: 301 EEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPA 360 EEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPA Sbjct: 301 EEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPA 360 Query: 361 PESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS 420 PESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS Sbjct: 361 PESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKAS 420 Query: 421 AQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF 480 AQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF Sbjct: 421 AQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF 480 Query: 481 DFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQ 540 DFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQ Sbjct: 481 DFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQ 540 Query: 541 EILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIH 600 EILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIH Sbjct: 541 EILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIH 600 Query: 601 KWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQV 660 KWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQV Sbjct: 601 KWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQV 660 Query: 661 AKKRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIE 720 AKKRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIE Sbjct: 661 AKKRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIE 720 Query: 721 IAPAYYDLSNFQKGDVKLSLERIKEKVDRLNELKQGKNKKKSKHSKK 767 IAPAYYDLSNFQKGDVKLSLERIKEKVDRLNELKQGKNKKKSKHSKK Sbjct: 721 IAPAYYDLSNFQKGDVKLSLERIKEKVDRLNELKQGKNKKKSKHSKK 767 >5D0U-A nrPDB Length = 714 Score = 1013 bits (2618), Expect = 0.0, Method: Composition-based stats. Identities = 504/703 (71%), Positives = 599/703 (85%), Gaps = 3/703 (0%) Query: 58 TSAEEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGE 117 T+A++A+ +ED INP+TG+ + +Y ILK RR+LPV+ QR EFL LY NNQI+VFVGE Sbjct: 3 TTAKQAEAVEDSDINPWTGQRHSERYFKILKARRKLPVNKQRQEFLDLYHNNQILVFVGE 62 Query: 118 TGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIR 177 TGSGKTTQIPQ+VL+DE+PH +ACTQPRRVAAMSVAQRVA+E+DVKLGEEVGYSIR Sbjct: 63 TGSGKTTQIPQYVLYDELPHQTGKLIACTQPRRVAAMSVAQRVADELDVKLGEEVGYSIR 122 Query: 178 FENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKR 237 FENKTS+KT+LKYMTDG LLREAM D D+SRYSCIILDEAHERTLATDILM LLKQ+ +R Sbjct: 123 FENKTSSKTLLKYMTDGQLLREAMHDRDMSRYSCIILDEAHERTLATDILMALLKQLSER 182 Query: 238 RPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQI 297 R DLKII+MSATLDA+KFQ YF +APLLAVPGRT+PVE++YTPE +RDY+++AIRTVLQI Sbjct: 183 RKDLKIIVMSATLDAQKFQSYFFNAPLLAVPGRTHPVEIFYTPEAERDYVEAAIRTVLQI 242 Query: 298 HATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIF 357 HA E GDILLFLTGE+EIEDA R+ISLE D+++RE GP+SVYPLYG+LPPHQQQRIF Sbjct: 243 HACEPEGDILLFLTGEEEIEDACRRISLEVDEMIRESDAGPMSVYPLYGTLPPHQQQRIF 302 Query: 358 EPAPESH--NGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSP 415 E AP+ GRPGRK +++TNIAETSLTIDGIVYVVDPGFSKQK+YNPR RVESLLVSP Sbjct: 303 EKAPQPFRPGGRPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNPRTRVESLLVSP 362 Query: 416 ISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGID 475 ISKASAQQRAGRAGRTRPGKCFRLYTEEAF+KELIEQ+YPEILRSNLS+TVLELKKLG++ Sbjct: 363 ISKASAQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQTYPEILRSNLSNTVLELKKLGVE 422 Query: 476 DLVHFDFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFE 535 DLVHFD MDPPAPETMMRALEELNYLACLDD+G LTPLG LAS+FPLDP LAVMLI S E Sbjct: 423 DLVHFDLMDPPAPETMMRALEELNYLACLDDDGELTPLGNLASEFPLDPALAVMLISSPE 482 Query: 536 FQCSQEILTIVAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAY 595 F CS EIL+I ++LSVP +++RP +KRAD+ K FAHPDGDH+TLLN YHA+K EA Sbjct: 483 FYCSNEILSITSLLSVPQIWVRPANARKRADEMKAQFAHPDGDHLTLLNAYHAYKGAEAR 542 Query: 596 EYGIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASG 655 + KWC +H+L+YR LS+ADN+R+QL+++M + +EL +T + Y+ NIR+AL +G Sbjct: 543 GEDMKKWCHEHFLSYRHLSSADNVRAQLKKIMETHGIELVSTPFHDKNYYTNIRRALLAG 602 Query: 656 FFMQVA-KKRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVR 714 FFMQVA ++ S +K Y TVKD Q VLIHPST + EWV+YNEFVLT+K Y+RTVT++R Sbjct: 603 FFMQVAMRESSNSKVYKTVKDEQLVLIHPSTTVTTPYEWVVYNEFVLTTKQYVRTVTNIR 662 Query: 715 PEWLIEIAPAYYDLSNFQKGDVKLSLERIKEKVDRLNELKQGK 757 PEWL+EIAP YYDLS FQKG++K +L R+ EK+ R +K K Sbjct: 663 PEWLLEIAPVYYDLSTFQKGEIKNALTRVAEKIRRQQAMKASK 705 >6ID1-V nrPDB Length = 795 Score = 965 bits (2494), Expect = 0.0, Method: Composition-based stats. Identities = 454/735 (61%), Positives = 553/735 (75%), Gaps = 22/735 (2%) Query: 20 PEQAAEIAEELSKQHPLPSEEPLVHHDAGEFKGLQRHHTSAEEAQKLEDGKINPFTGREF 79 P +A+ A H S H A HTS + INPFT Sbjct: 76 PLKASHSAHSTHSAHSTHST-----HSAHSTHAGHAGHTSLPQC-------INPFTNLPH 123 Query: 80 TPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLE 139 TP+Y DILK R +LPV +D F + +Q V VGETGSGKTTQIPQ+ + Sbjct: 124 TPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPG 183 Query: 140 NTQ-VACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLR 198 + VACTQPRRVAAMSVAQRVA+EMDV LG+EVGYSIRFE+ +S KTILKYMTDGMLLR Sbjct: 184 PKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLR 243 Query: 199 EAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRY 258 EAM D L RY IILDEAHERTLATDILMG+LK+VV++R DLK+I+MSATLDA KFQ Y Sbjct: 244 EAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIY 303 Query: 259 FNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEA-GDILLFLTGEDEIE 317 F++ PLL +PGRT+PVE++YTPE +RDYL++AIRTV+QIH EE GD+LLFLTG++EI+ Sbjct: 304 FDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEID 363 Query: 318 DAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAP-ESHNGRPGRKVVIST 376 +A ++I E D L E G + + PLY +LPP QQQRIFEP P + NG GRKVV+ST Sbjct: 364 EACKRIKREVDDLGPEVG--DIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVST 421 Query: 377 NIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKC 436 NIAETSLTIDG+V+V+DPGF+KQKVYNPRIRVESLLV+ ISKASAQQRAGRAGRTRPGKC Sbjct: 422 NIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKC 481 Query: 437 FRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALE 496 FRLYTE+A++ E+ + +YPEILRSNL S VL+LKKLGIDDLVHFDFMDPPAPET+MRALE Sbjct: 482 FRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALE 541 Query: 497 ELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFI 556 LNYLA L+D+G+LT LG + ++FPLDP LA M+I S ++ CS E+L+I AMLSVP F+ Sbjct: 542 LLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFV 601 Query: 557 RPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAA 616 RPT+ KK AD+AK FAH DGDH+TLLNVYHAFK + +WC D+++NYRSL +A Sbjct: 602 RPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESV----QWCYDNFINYRSLMSA 657 Query: 617 DNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDN 676 DN+R QL R+M+R+NL +TD+ S Y+ NIRKAL +G+FMQVA Y+TVKDN Sbjct: 658 DNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTG-HYLTVKDN 716 Query: 677 QDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSNFQKGDV 736 Q V +HPSTVL H EWV+YNEFVLT+KNYIRT T ++PEWL++IAP YYD+SNF + + Sbjct: 717 QVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEA 776 Query: 737 KLSLERIKEKVDRLN 751 K L+RI K+ Sbjct: 777 KRQLDRIIAKLQSKE 791 >5XDR-A nrPDB Length = 690 Score = 964 bits (2492), Expect = 0.0, Method: Composition-based stats. Identities = 443/684 (64%), Positives = 540/684 (78%), Gaps = 10/684 (1%) Query: 71 INPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFV 130 INPFT TP+Y DILK R +LPV +D F + +Q V VGETGSGKTTQIPQ+ Sbjct: 10 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 69 Query: 131 LFDEMPHLENTQ-VACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILK 189 + + VACTQPRRVAAMSVAQRVA+EMDV LG+EVGYSIRFE+ +S KTILK Sbjct: 70 VEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILK 129 Query: 190 YMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSAT 249 YMTDGMLLREAM D L RY IILDEAHERTLATDILMG+LK+VV++R DLK+I+MSAT Sbjct: 130 YMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSAT 189 Query: 250 LDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEA-GDILL 308 LDA KFQ YF++ PLL +PGRT+PVE++YTPE +RDYL++AIRTV+QIH EE GD+LL Sbjct: 190 LDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLL 249 Query: 309 FLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAP-ESHNGR 367 FLTG++EI++A ++I E D L E G + + PLY +LPP QQQRIFEP P + NG Sbjct: 250 FLTGQEEIDEACKRIKREVDDLGPEVG--DIKIIPLYSTLPPQQQQRIFEPPPPKKQNGA 307 Query: 368 PGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGR 427 GRKVV+STNIAETSLTIDG+V+V+DPGF+KQKVYNPRIRVESLLV+ ISKASAQQRAGR Sbjct: 308 IGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGR 367 Query: 428 AGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPA 487 AGRTRPGKCFRLYTE+A++ E+ + +YPEILRSNL S VL+LKKLGIDDLVHFDFMDPPA Sbjct: 368 AGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPA 427 Query: 488 PETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVA 547 PET+MRALE LNYLA L+D+G+LT LG + ++FPLDP LA M+I S ++ CS E+L+I A Sbjct: 428 PETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITA 487 Query: 548 MLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHY 607 MLSVP F+RPT+ KK AD+AK FAH DGDH+TLLNVYHAFK + +WC D++ Sbjct: 488 MLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESV----QWCYDNF 543 Query: 608 LNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGA 667 +NYRSL +ADN+R QL R+M+R+NL ++D+ S Y+ NIRKAL +G+FMQVA Sbjct: 544 INYRSLMSADNVRQQLSRIMDRFNLPRRSSDFTSRDYYINIRKALVTGYFMQVAHLERTG 603 Query: 668 KGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYD 727 Y+TVKDNQ V +HPSTVL H EWV+YNEFVLT+KNYIRT T ++PEWL++IAP YYD Sbjct: 604 -HYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYD 662 Query: 728 LSNFQKGDVKLSLERIKEKVDRLN 751 +SNF + + K L+RI K+ Sbjct: 663 MSNFPQCEAKRQLDRIIAKLQSKE 686 >6I3O-A nrPDB Length = 677 Score = 865 bits (2236), Expect = 0.0, Method: Composition-based stats. Identities = 330/662 (49%), Positives = 456/662 (68%), Gaps = 19/662 (2%) Query: 84 VDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQV 143 + I + R LPV RD+ ++ ++NQI++ VGETGSGKTTQ+ Q++ + + Sbjct: 3 MSIKEQRESLPVFQFRDQIIQAVKDNQILIVVGETGSGKTTQVTQYLAE--AGFTKYGMI 60 Query: 144 ACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMED 203 CTQPRRVAA+SVA+RVAEE+ +LG+EVGY+IRFE+ TS T +KYMTDGML RE + D Sbjct: 61 GCTQPRRVAAVSVAKRVAEEVGCQLGQEVGYTIRFEDVTSPATKIKYMTDGMLQREILMD 120 Query: 204 HDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAP 263 DL RYS I+LDEAHERT+ATD+L LLK+ VKRRPDLK+I+ SATLDAEKF YFN P Sbjct: 121 PDLKRYSVIMLDEAHERTIATDVLFALLKKTVKRRPDLKVIVTSATLDAEKFSEYFNSCP 180 Query: 264 LLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKI 323 + +PGRT+PVE+ Y+ E + DYL++A+ TV+QIH TE GDIL+FLTG++EI+ A + Sbjct: 181 IFTIPGRTFPVEILYSREPEPDYLEAALTTVMQIHLTEPPGDILVFLTGQEEIDTACEIL 240 Query: 324 SLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSL 383 L L + P+Y +LP Q RIFEPAP RKVVI+TNIAETS+ Sbjct: 241 YERMKALG--PSVPELIILPIYSALPSEMQSRIFEPAPPG-----SRKVVIATNIAETSI 293 Query: 384 TIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEE 443 TID I YVVDPGF KQ Y+P++ ++SL+V+PIS+A A QRAGRAGRT PGKCFRLYTE Sbjct: 294 TIDYIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEA 353 Query: 444 AFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLAC 503 A+Q E++ + P+I R NL++T+L LK +GI+DL+ FDFMDPP TM+ ALEEL L Sbjct: 354 AYQSEMLPTTIPDIQRQNLANTILLLKAMGINDLLRFDFMDPPPVNTMLTALEELYALGA 413 Query: 504 LDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKK 563 LDDEG LT LGR + FP++P L+ +LI S + CS E++TIV+ML++ +F RP ++ Sbjct: 414 LDDEGLLTRLGRKMADFPMEPSLSKVLIASVDKGCSDEMVTIVSMLNLQQIFYRPKDKQQ 473 Query: 564 RADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQL 623 +AD K F P GDH+TLLNVY+A+K+ + WC ++Y+ R++ A ++R Q+ Sbjct: 474 QADQKKAKFHDPTGDHLTLLNVYNAWKNSGYS----NAWCFENYIQARAMRRARDVRQQI 529 Query: 624 ERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDNQDVLIHP 683 ++M R+ + + ++ D IR+AL +GFF A+K +GY T+ + V +HP Sbjct: 530 VKIMERHRHPIISCGRDT----DKIRQALCAGFFRNTARK-DPQEGYKTLTEGTPVYLHP 584 Query: 684 STVL-GHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSNFQKGDVKLSLER 742 S+ L G AEWV+Y+E VLT+K Y+ T++ P+WL+E AP ++ L+ + + ER Sbjct: 585 SSALFGKQAEWVLYHELVLTTKEYMHFTTAIEPKWLVEAAPTFFKLAPTDRLSKRKKAER 644 Query: 743 IK 744 I+ Sbjct: 645 IQ 646 >6FA9-A nrPDB Length = 655 Score = 815 bits (2106), Expect = 0.0, Method: Composition-based stats. Identities = 318/649 (48%), Positives = 430/649 (66%), Gaps = 28/649 (4%) Query: 85 DILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVA 144 I ++R+ LPV+A RD FL + Q+++ VGETGSGKTTQIPQ+ L + N ++A Sbjct: 23 TIQEVRKSLPVYAYRDAFLDAVKEYQVLILVGETGSGKTTQIPQY-LHEAGYTKGNRKIA 81 Query: 145 CTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDH 204 CTQPRRVAAMSVA RVA+EM V+LG EVGYSIRFE+ TS KTILKYMTDGMLLRE + Sbjct: 82 CTQPRRVAAMSVAARVADEMGVRLGHEVGYSIRFEDCTSEKTILKYMTDGMLLREMVTSP 141 Query: 205 DLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPL 264 DL+ YSCI++DEAHERT+ TDIL+ L+K + + RP+L++II SATL+AEKF YF+DAP+ Sbjct: 142 DLADYSCIMIDEAHERTVHTDILLALIKDLTRARPELRLIISSATLNAEKFSAYFDDAPI 201 Query: 265 LAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKIS 324 VPGR +PVE+YYT + +YL++A+ TV QIHAT+ GDIL+FLTG++EIE A ++ Sbjct: 202 FNVPGRVHPVEVYYTSAPESNYLEAALVTVFQIHATQPEGDILVFLTGQEEIERACERV- 260 Query: 325 LEGDQLVREEG--CGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETS 382 +++ R+ G + P+Y ++P Q +IFEP P RKVV STNIAETS Sbjct: 261 ---EEIRRKLGKRVPEIIALPIYSNMPSEMQAKIFEPTPPG-----ARKVVFSTNIAETS 312 Query: 383 LTIDGIVYVVDPGFSKQKVYNP--RIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLY 440 LTIDGIVYV+D G+ K+ ++P +L V P S+A+A QR GRAGR +PGKCFRLY Sbjct: 313 LTIDGIVYVIDSGYVKENTFSPVGTTGQSTLAVVPCSRAAANQRMGRAGRVKPGKCFRLY 372 Query: 441 TEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNY 500 T+ A+ E+ E PEI R++LSS VL+LK LGIDDL+ FDF+DPP E ++++L L Sbjct: 373 TKYAYLSEMDESPTPEIQRTSLSSVVLQLKALGIDDLLGFDFLDPPPTELLIKSLNMLYA 432 Query: 501 LACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAML-SVPNVFIRPT 559 L L+ G LT +GR +FP +PMLA LI + + C E+LTIV+ML V +F RP Sbjct: 433 LGALNSAGQLTRVGRQMGEFPTEPMLAKALIAATQEGCVSEVLTIVSMLGEVGTLFFRPK 492 Query: 560 KDKKRADDAKNIFAHPD-GDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADN 618 K AD A+ F D GDH+TLLN+Y+ + E W R+++L RSL+ A + Sbjct: 493 DKKVHADSARARFTVRDGGDHLTLLNIYNQWVEAEYSPI----WARENFLAQRSLTRARD 548 Query: 619 IRSQLERLMNRY--NLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDN 676 +R QL +L +R E + +P I +AL + FF+ A+ GY T+K+N Sbjct: 549 VRDQLAKLCDRILDGSEASCGGVNNPT---PILRALTAAFFLNAARLNRAGDGYRTLKNN 605 Query: 677 QDVLIHPSTVL---GHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIA 722 V +HPS+V+ + +IY+E V+TSK Y+R+V V P WL E Sbjct: 606 ITVYVHPSSVVRGMDPPPKVIIYHELVVTSKEYVRSVIPVEPRWLSEFG 654 >5GM6-Y nrPDB Length = 876 Score = 761 bits (1966), Expect = 0.0, Method: Composition-based stats. Identities = 294/706 (41%), Positives = 433/706 (61%), Gaps = 55/706 (7%) Query: 60 AEEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETG 119 A AQ LE + + + I + R+ LPVH +DE L+ + NQ+++ +GETG Sbjct: 200 ARLAQALETEE----------KRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETG 249 Query: 120 SGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFE 179 SGKTTQ+PQ+++ D Q+A TQPRRVAA SVA RVA+EM+V LG+EVGY IRFE Sbjct: 250 SGKTTQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFE 309 Query: 180 NKT-SNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRR 238 +KT NKT+LKYMTDGMLLRE + D LS+YSCI++DEAHERTLATDIL+GLLK ++ +R Sbjct: 310 DKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQR 369 Query: 239 PDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIH 298 P LK++I SAT++A+KF +F++ P+ VPGR YPV+++YT + + +Y+ +AI T+ QIH Sbjct: 370 PTLKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIH 429 Query: 299 ATEE-AGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIF 357 T+ GDIL+FLTG++EIE K+ +L + + P+Y +LP QQ +IF Sbjct: 430 TTQSLPGDILVFLTGQEEIERTKTKLEEIMSKLGSR--TKQMIITPIYANLPQEQQLKIF 487 Query: 358 EPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPIS 417 +P PE+ RKVV++TNIAETSLTIDGI YV+DPGF K+ Y P + LL P S Sbjct: 488 QPTPEN-----CRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCS 542 Query: 418 KASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDL 477 +AS QRAGRAGR PGKCFR++T+ ++ EL PEI R+NLS+TVL L LG+ DL Sbjct: 543 RASVDQRAGRAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDL 602 Query: 478 VHFDFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVML-IGSFEF 536 + F MD P+ T+ ++LE L L L+ +G +T LG++ +FP +P A +L + Sbjct: 603 IKFPLMDKPSIPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHE 662 Query: 537 QCS---QEILTIVAML-SVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSD 592 QC +E LTIV+ML P++FI ++ D A ++ + + DHI L +++ +++ Sbjct: 663 QCQGVLEECLTIVSMLHETPSLFI-----GQKRDAAASVLSEVESDHILYLEIFNQWRNS 717 Query: 593 EAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFD------ 646 + WC+DH + ++++ NIR+QL R + L + D K + Sbjct: 718 KFS----RSWCQDHKIQFKTMLRVRNIRNQLFRCSEKVGL-VEKNDQARMKIGNIAGYIN 772 Query: 647 -NIRKALASGFFMQVAKKRSGAKGYITVKDNQ---DVLIHPSTVL--------GHDAEWV 694 I + SGF M + + G GY T+ + +V +HP+++L +++V Sbjct: 773 ARITRCFISGFPMNIVQ--LGPTGYQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYV 830 Query: 695 IYNEFVLTSKNYIRTVTSV-RPEWLIEIAPAYYDLSNFQKGDVKLS 739 +Y + +LTSK +IR + + EWLI++ P + K + Sbjct: 831 LYQQLMLTSKEFIRDCLVIPKEEWLIDMVPQIFKDLIDDKTNRGRR 876 >5N8S-A nrPDB Length = 944 Score = 723 bits (1866), Expect = 0.0, Method: Composition-based stats. Identities = 232/753 (30%), Positives = 363/753 (48%), Gaps = 110/753 (14%) Query: 87 LKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPH--LENTQVA 144 L+ R++LP D+ ++ + NQ+++ VG TG GKTTQ+PQ +L D + + ++ Sbjct: 147 LEARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRII 206 Query: 145 CTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFEN-KTSNKTILKYMTDGMLLREAMED 203 CTQPRR++A+++A+ V+ E LG VGY IR E+ K + + Y T G+LL++ D Sbjct: 207 CTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSD 266 Query: 204 HDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAP 263 + S +ILDE HER++ TD+LMGLLK ++ RPDLK+I+MSAT+ + F YFN+ P Sbjct: 267 PLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCP 326 Query: 264 LLAVPGRTYPVELYYTPEFQ-------------------------------------RDY 286 + + G +PV++ Y + R+ Sbjct: 327 MFRIEGVMFPVKMLYLEDVLSKTNYEFQKFRDRRPKRDPPERRMKHEAMIEPYLRRIRNS 386 Query: 287 LDSAIRTVLQ-------------------IHATEEAGDILLFLTGEDEIE---DAVRKIS 324 DS + L+ I E G IL+FL G D+I + + K Sbjct: 387 YDSRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLYNILDKPK 446 Query: 325 LEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLT 384 Q R+ ++V+PL+ + +QQ +F P RKV+IST IAETS+T Sbjct: 447 TSKGQRWRDH----MAVFPLHSLMQSGEQQAVFRRPPAGQ-----RKVIISTIIAETSVT 497 Query: 385 IDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEA 444 ID +VYV++ G +K Y+ ++SL ++KA+ QQR GRAGR RPG C+ L++ A Sbjct: 498 IDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRRGRAGRVRPGICYNLFS-RA 556 Query: 445 FQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF--DFMDPPAPETMMRALEELNYLA 502 + + + PEILRS L S +L LK L IDD F ++ P PE + +E L + Sbjct: 557 REDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTLINAPNPEAIKMGVELLKRIE 616 Query: 503 CLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDK 562 LD G LTPLG ++ P+DP + M++ S F C I + A LS + F P + Sbjct: 617 ALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLGKE 676 Query: 563 KRADDAKNIFA-HPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRS 621 R D+ K A + DH+ + N A++ D Y + +C ++L+ +L + +++ Sbjct: 677 SRVDEIKRRMARNMRSDHLMVHNTIIAYR-DSRYSHAERDFCYKNFLSSMTLQQLERMKN 735 Query: 622 QLERLMNRYNL--ELNTTDYESPKYFDNI---RKALASGFFMQVA--------KKRSGAK 668 Q L+ Y N D S K + I R + +G + +A K R A Sbjct: 736 QFSELLYNYKFLASSNCKDAASNKNSEKIPLLRAIIGAGLYPNMAHLRKSRQIKNRVRAI 795 Query: 669 GYITVKDNQDVLIHPSTVL----GHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLI----- 719 + D + V HPS+V G D+ + +Y + ++ ++ T V P LI Sbjct: 796 HTMATDDGRRVNFHPSSVNSGESGFDSAYFVYFQRQKSTDLFLLDSTMVFPMALIIFGDG 855 Query: 720 ------------EIAPAYYDLSNFQKGDVKLSL 740 +A YY N + DV + L Sbjct: 856 VEAGVTQNTPYLCVAKTYYFKCNRETADVVIQL 888 >5VHD-D nrPDB Length = 870 Score = 706 bits (1823), Expect = 0.0, Method: Composition-based stats. Identities = 234/753 (31%), Positives = 372/753 (49%), Gaps = 107/753 (14%) Query: 82 KYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVL--FDEMPHLE 139 +Y+++ + R +LP + + E + + N+Q+ V GETG GKTTQ+ QF+L + E Sbjct: 49 RYIEMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGS 108 Query: 140 NTQVACTQPRRVAAMSVAQRVAEEM--DVKLGEEVGYSIRFENKTSNKTI-LKYMTDGML 196 ++ CTQPRR++A+SVA+RVA E G GY IR +++ K + Y T G++ Sbjct: 109 ACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGII 168 Query: 197 LREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQ 256 L+ D LS S I+LDE HER L +D+LM ++K ++ RPDLK+++MSATL+AEKF Sbjct: 169 LQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFS 228 Query: 257 RYFNDAPLLAVPGRTYPVELY----------YTPEFQRDYLDSAIRTVLQIHATEEA--- 303 YF + P++ +PG T+PV Y Y PE Q+++ + +Q H + Sbjct: 229 EYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPE-QKEHRSQFKKGFMQGHVNRQEKYY 287 Query: 304 ----------------------GDILLFLTGEDE------IEDAVRKISLE---GDQLVR 332 + + +DE I +R I LE G LV Sbjct: 288 YEAIYKERWPGYLRELRQRYSASTVDVVEMMDDEKVDLNLIAALIRYIVLEEEDGAILVF 347 Query: 333 EEGCGPLS------------------VYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVI 374 G +S + PL+ +P Q ++F+ P RK+VI Sbjct: 348 LPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKRTPPGV-----RKIVI 402 Query: 375 STNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPG 434 +TNIAETS+TID +VYV+D G K+ ++ + + ++ +SKA+A+QR GRAGR +PG Sbjct: 403 ATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPG 462 Query: 435 KCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHF--DFMDPPAPETMM 492 C+ LY L + PEILR+ L L++K L + + HF MDPP+ E ++ Sbjct: 463 HCYHLYNSL-RASLLDDYQLPEILRTPLEELCLQIKILRLGGIAHFLSRLMDPPSNEAVL 521 Query: 493 RALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVP 552 +++ L L LD + LTPLG ++ P++P + M++ F C +LTI A LS Sbjct: 522 LSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFK 581 Query: 553 NVFIRPTKDKKRADDAKNIFA-HPDGDHITLLNVYHAFKSDEAYEYGIHK-WCRDHYLNY 610 + F+ P +K AD + A DH+T++N + ++ + + K +C +++L+ Sbjct: 582 DPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFKGWEKAKQRGFRYEKDYCWEYFLSS 641 Query: 611 RSLSAADNIRSQL-ERLMNR-YNLELNTTDYESPKYFDN---IRKALASGFFMQVA---- 661 +L N++ Q E L+ + N D ES DN I+ + +G + +VA Sbjct: 642 NTLQMLHNMKGQFAEHLLGAGFVSSRNPQDPESNINSDNEKIIKAVICAGLYPKVAKIRL 701 Query: 662 ---KKRSGAKGYITVKDNQDVLIHPSTVLGHDAE----WVIYNEFVLTSKNYIRTVTSVR 714 KKR K Y K + V IHP +V E W+IY+ + TS Y+ T V Sbjct: 702 NLGKKRKMVKVY--TKTDGVVAIHPKSVNVEQTEFNYNWLIYHLKMRTSSIYLYDCTEVS 759 Query: 715 PEWLIEIAPAYYDLSNFQKGDVKLSLERIKEKV 747 P L+ GD+ + + +E + Sbjct: 760 PYCLLFFG-----------GDISIQKDNDQETI 781 >6HEG-A nrPDB Length = 809 Score = 462 bits (1189), Expect = e-130, Method: Composition-based stats. Identities = 163/443 (36%), Positives = 240/443 (54%), Gaps = 19/443 (4%) Query: 92 ELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRV 151 LPV A E L ++ TG+GK+T +P +L N ++ +PRR+ Sbjct: 3 SLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHPG---INGKIILLEPRRL 59 Query: 152 AAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSC 211 AA +VAQR+AE ++ K G+ VGY +R +N T L+ +T+G+L R D +LS Sbjct: 60 AARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGL 119 Query: 212 IILDEAHERTLATDILMGLLKQVVKR-RPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGR 270 +ILDE HER+L D+ + LL V + R DLK++IMSATLD ++ Q+ +AP++ GR Sbjct: 120 VILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGR 179 Query: 271 TYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQL 330 ++PVE Y P D A+ +E+G +LLFL G EI+ +QL Sbjct: 180 SFPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLFLPGVGEIQRV-------QEQL 232 Query: 331 VREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVY 390 G L + PLYG+L + Q++ PAP+ RKVV++TNIAETSLTI+GI Sbjct: 233 ASRIGSDVL-LCPLYGALSLNDQRKAILPAPQGM-----RKVVLATNIAETSLTIEGIRL 286 Query: 391 VVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELI 450 VVD + ++PR + L+ +S+AS QRAGRAGR PG L +E ++ Sbjct: 287 VVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGISLHLIAKEQAERA-A 345 Query: 451 EQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDEGNL 510 QS PEIL+S+LS ++EL + G D ++D P ++ A L L L+ E L Sbjct: 346 AQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPVVNLLAAKRLLQMLGALEGE-RL 404 Query: 511 TPLGRLASQFPLDPMLAVMLIGS 533 + G+ + DP LA ML+ + Sbjct: 405 SAQGQKMAALGNDPRLAAMLVSA 427 >3I4U-A nrPDB Length = 270 Score = 337 bits (864), Expect = 1e-92, Method: Composition-based stats. Identities = 111/256 (43%), Positives = 161/256 (62%), Gaps = 11/256 (4%) Query: 487 APETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIV 546 ET++ A+E+L L LDDEG LT LGR ++FPL+PML MLI S CS+E+LTIV Sbjct: 16 PMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIV 75 Query: 547 AMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDH 606 +MLSV NVF RP + AD K F +GDH+TLL VY+++K+++ + WC ++ Sbjct: 76 SMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFS----NPWCYEN 131 Query: 607 YLNYRSLSAADNIRSQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSG 666 ++ RSL A +IR Q+ +M+R+ L++ + + ++KA+ SGFF AKK Sbjct: 132 FIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTV----RVQKAICSGFFRNAAKK-DP 186 Query: 667 AKGYITVKDNQDVLIHPSTVL-GHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAY 725 +GY T+ D Q V IHPS+ L EWV+Y+E VLT+K Y+R VT++ P WL+E APA+ Sbjct: 187 QEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAF 246 Query: 726 YDLSNFQ-KGDVKLSL 740 + + +GD LS Sbjct: 247 FKVLEVDLQGDHGLSA 262 >5WX1-A nrPDB Length = 733 Score = 316 bits (810), Expect = 2e-86, Method: Composition-based stats. Identities = 94/413 (22%), Positives = 170/413 (41%), Gaps = 93/413 (22%) Query: 117 ETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSI 176 TG+GKTT++P+ V+ + H +V P R AA SV Q + ++ + +++ Sbjct: 277 ATGAGKTTELPRSVIEEIGRH---KRVLVLIPLRAAAESVYQYMRQK-----HPSIAFNL 328 Query: 177 RFENKTSN--KTILKYMTDGML-------LREAMEDHDLSRYSCIILDEAHERTLATDIL 227 R T + Y + G LR AM + YS I LDE H AT Sbjct: 329 RIGEMKEGDMATGITYASYGYFCQMPQPKLRAAMVE-----YSFIFLDEYH---CATPEQ 380 Query: 228 MGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQR--- 284 + ++ ++ + +L+++ M+AT A + G+ +P+E + PE + Sbjct: 381 LAIMGKIHRFSENLRVVAMTAT-----------PAGTVTTTGQKHPIEEFIAPEVMKGED 429 Query: 285 ---DYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSV 341 +YLD A L+I E ++L+F+ + + +K+ +G S Sbjct: 430 LGSEYLDIA---GLKIPVEEMKSNMLVFVPTRNMAVETAKKLKAKGYN----------SG 476 Query: 342 YPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKV 401 Y Y P + + +P VV++TN E+ +T+ + VVD G +K Sbjct: 477 Y-YYSGEDPSNLRVVTSQSP---------YVVVATNAIESGVTLPDLDVVVDTGLKCEKR 526 Query: 402 YNPRIR----VESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEI 457 + V L ++ QR GR GR +PG+ +R Q P + Sbjct: 527 IRLSSKMPFIVTGLKRMAVTIGEQAQRRGRVGRVKPGRYYR------------SQETP-V 573 Query: 458 LRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDEGNL 510 + +L+ ++ GI+D ++ + ++ E+NY L +E +L Sbjct: 574 GSKDYHYDLLQAQRYGIEDGIN-----------ITKSFREMNYDWSLYEEDSL 615 >4CBI-A nrPDB Length = 516 Score = 312 bits (798), Expect = 5e-85, Method: Composition-based stats. Identities = 91/408 (22%), Positives = 169/408 (41%), Gaps = 83/408 (20%) Query: 117 ETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSI 176 TG+GKTT++P+ V+ + H +V P R AA SV Q + ++ + +++ Sbjct: 52 ATGAGKTTELPRSVIEEIGRH---KRVLVLIPLRAAAESVYQYMRQK-----HPSIAFNL 103 Query: 177 RFENKTSN--KTILKYMTDGMLLREAMED--HDLSRYSCIILDEAHERTLATDILMGLLK 232 R T + Y + G + + + YS I LDE H AT + ++ Sbjct: 104 RIGEMKEGDMATGITYASYGYFCQMSQPKLRAAMVEYSFIFLDEYH---CATPEQLAIMG 160 Query: 233 QVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQR------DY 286 ++ + +L+++ M+AT A + G+ +P+E + PE + +Y Sbjct: 161 KIHRFSENLRVVAMTAT-----------PAGTVTTTGQKHPIEEFIAPEVMKGEDLGSEY 209 Query: 287 LDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYG 346 LD A L+I E ++L+F+ + +A +K+ +G S Y Y Sbjct: 210 LDIA---GLKIPVEEMKNNMLVFVPTRNMAVEAAKKLKAKGYN----------SGY-YYS 255 Query: 347 SLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRI 406 P + + +P VV++TN E+ +T+ + VVD G +K Sbjct: 256 GEDPSNLRVVTSQSP---------YVVVATNAIESGVTLPDLDVVVDTGLKCEKRIRLSP 306 Query: 407 R----VESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNL 462 + V L ++ QR GR GR +PG+ +R Q P + + Sbjct: 307 KMPFIVTGLKRMAVTIGEQAQRRGRVGRVKPGRYYR------------SQETP-VGSKDY 353 Query: 463 SSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDEGNL 510 +L+ ++ GI+D ++ + ++ E+NY L +E +L Sbjct: 354 HYDLLQAQRYGIEDGIN-----------ITKSFREMNYDWSLYEEDSL 390 >5WSO-A nrPDB Length = 476 Score = 308 bits (788), Expect = 8e-84, Method: Composition-based stats. Identities = 89/413 (21%), Positives = 166/413 (40%), Gaps = 93/413 (22%) Query: 117 ETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSI 176 TG+GKTT++P+ V+ + H +V P R AA SV Q + + + +++ Sbjct: 20 ATGAGKTTELPKAVIEEIGRH---KRVLVLIPLRAAAESVYQYMRLK-----HPSISFNL 71 Query: 177 RFENKTSN--KTILKYMTDGML-------LREAMEDHDLSRYSCIILDEAHERTLATDIL 227 R + T + Y + G LR AM + YS I LDE H AT Sbjct: 72 RIGDMKEGDMATGITYASYGYFCQMPQPKLRAAMVE-----YSYIFLDEYH---CATPEQ 123 Query: 228 MGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQR--- 284 + ++ ++ + ++++ M+AT A + G+ +P+E + PE + Sbjct: 124 LAIIGKIHRFSESIRVVAMTAT-----------PAGSVTTTGQKHPIEEFIAPEVMKGED 172 Query: 285 ---DYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSV 341 +LD A L+I E G++L+F+ + + +K+ +G S Sbjct: 173 LGSQFLDIA---GLKIPVDEMKGNMLVFVPTRNMAVEVAKKLKAKGYN----------SG 219 Query: 342 YPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKV 401 Y Y P + + +P V+++TN E+ +T+ + V+D G +K Sbjct: 220 Y-YYSGEDPANLRVVTSQSP---------YVIVATNAIESGVTLPDLDTVIDTGLKCEKR 269 Query: 402 YNPRIR----VESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEI 457 + V L ++ QR GR GR +PG+ +R Sbjct: 270 VRVSSKIPFIVTGLKRMAVTVGEQAQRRGRVGRVKPGRYYR-------------SQETAT 316 Query: 458 LRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDEGNL 510 + +L+ ++ GI+D ++ + ++ E+NY L +E +L Sbjct: 317 GSKDYHYDLLQAQRYGIEDGIN-----------VTKSFREMNYDWSLYEEDSL 358 >3LLM-A nrPDB Length = 235 Score = 238 bits (608), Expect = 5e-63, Method: Composition-based stats. Identities = 72/185 (38%), Positives = 111/185 (60%), Gaps = 5/185 (2%) Query: 86 ILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFD--EMPHLENTQV 143 IL+ R LPV E L+ N +++ G TG GKTTQ+PQF+L D + + Sbjct: 53 ILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNI 112 Query: 144 ACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTS-NKTILKYMTDGMLLREAME 202 TQPRR++A+SVA+RVA E + G+ GYS+RFE+ + + T G+LLR+ Sbjct: 113 VVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL-- 170 Query: 203 DHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDA 262 + + S +I+DE HER + TD L+ +L+ VV+ P+++I++MSAT+D F YF + Sbjct: 171 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNC 230 Query: 263 PLLAV 267 P++ V Sbjct: 231 PIIEV 235 >2P6R-A nrPDB Length = 702 Score = 69.4 bits (168), Expect = 6e-12, Method: Composition-based stats. Identities = 75/383 (19%), Positives = 139/383 (36%), Gaps = 55/383 (14%) Query: 84 VDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQV 143 V ILK + + E ++ + + ++ T +GKT ++ + + ++ V Sbjct: 15 VGILKEEGIEELFPPQAEAVEKVFSGKNLLLAMPTAAGKTLLAEMAMVREAIKGGKSLYV 74 Query: 144 ACTQPRRVAAMSVAQRVA--EEMDVKLGEEVG-YSIRFENKTSNKTILKYMTDGMLLREA 200 P R A + E++ +++G G Y R E+ + I+ ++ Sbjct: 75 V---PLRALAGEKYESFKKWEKIGLRIGISTGDYESRDEH-LGDCDIIVTTSEKADSLIR 130 Query: 201 MEDHDLSRYSCIILDEAH----ERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQ 256 + SC+++DE H E+ AT L L+ ++ + L++I +SAT Sbjct: 131 NRASWIKAVSCLVVDEIHLLDSEKRGAT--LEILVTKMRRMNKALRVIGLSATAPNVTEI 188 Query: 257 RYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATE-------EAGDILLF 309 + DA R P+ E + D A T ++ E E G +L+F Sbjct: 189 AEWLDADYYVSDWRPVPLVEGVLCEGTLELFDGAFSTSRRVKFEELVEECVAENGGVLVF 248 Query: 310 LTGEDEIEDAVRKISL------------------EGDQLVREEGCGPLSVYPLYGSLPPH 351 + E K+S ++ R+ + + + Sbjct: 249 ESTRRGAEKTAVKLSAITAKYVENEGLEKAILEENEGEMSRKLAECVRKGAAFHHAGLLN 308 Query: 352 QQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESL 411 Q+R+ E A R KVV++T + + +V + Y+ RI+V Sbjct: 309 GQRRVVEDA----FRRGNIKVVVATPTLAAGVNLPARRVIVRS-LYRFDGYSKRIKVS-- 361 Query: 412 LVSPISKASAQQRAGRAGRTRPG 434 +Q AGRAGR PG Sbjct: 362 --------EYKQMAGRAGR--PG 374 >2WV9-A nrPDB Length = 673 Score = 64.0 bits (154), Expect = 3e-10, Method: Composition-based stats. Identities = 79/386 (20%), Positives = 136/386 (35%), Gaps = 59/386 (15%) Query: 86 ILKIRRELPV-HAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVA 144 + R E PV A E L + Q+ V G+GKT +I ++ D + + + A Sbjct: 220 VQGERVEEPVPEAYNPEML---KKRQLTVLDLHPGAGKTRRILPQIIKDAI--QKRLRTA 274 Query: 145 CTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDH 204 P RV A +A+ + L V + + S I+ M L M Sbjct: 275 VLAPTRVVAAEMAEALRGLPVRYLTPAV------QREHSGNEIVDVMCHATLTHRLMSPL 328 Query: 205 DLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPL 264 + Y+ ++DEAH A+ G + V+ I M+AT Sbjct: 329 RVPNYNLFVMDEAHFTDPASIAARGYIATRVEAGEA-AAIFMTATP-------------- 373 Query: 265 LAVPGRTYPVELYYTP--EFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRK 322 PG + P +P + + D A + + T+ AG + F+ + + Sbjct: 374 ---PGTSDPFPDTNSPVHDVSSEIPDRAWSSGFE-WITDYAGKTVWFVASVKMSNEIAQC 429 Query: 323 ISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETS 382 + G ++++ + YP VI+T+I+E Sbjct: 430 LQRAGKRVIQLNRKSYDTEYP--------------------KCKNGDWDFVITTDISEMG 469 Query: 383 LTIDGIVYVVDPGF-SKQKVYNPRIRVESLLV-SPISKASAQQRAGRAGR--TRPGKCFR 438 G V+D K + + L V S I+ ASA QR GR GR ++ G + Sbjct: 470 ANF-GASRVIDCRKSVKPTILDEGEGRVILSVPSAITSASAAQRRGRVGRNPSQIGDEYH 528 Query: 439 LYTEEAFQKELIEQ-SYPEILRSNLS 463 + ++ + +IL N+ Sbjct: 529 YGGGTSEDDTMLAHWTEAKILLDNIH 554 >2V8O-A nrPDB Length = 444 Score = 61.7 bits (148), Expect = 1e-09, Method: Composition-based stats. Identities = 72/367 (19%), Positives = 130/367 (35%), Gaps = 55/367 (14%) Query: 104 KLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEE 163 ++ + Q+ V G+GKT +I ++ D + + + A P RV A +A+ + Sbjct: 7 EMLKKRQLTVLDLHPGAGKTRRILPQIIKDAI--QKRLRTAVLAPTRVVAAEMAEALRGL 64 Query: 164 MDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLA 223 L V + + S I+ M L M + Y+ ++DEAH A Sbjct: 65 PVRYLTPAV------QREHSGNEIVDVMCHATLTHRLMSPLRVPNYNLFVMDEAHFTDPA 118 Query: 224 TDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTP--E 281 + G + V+ I M+AT PG + P +P + Sbjct: 119 SIAARGYIATRVEAGEA-AAIFMTATP-----------------PGTSDPFPDTNSPVHD 160 Query: 282 FQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSV 341 + D A + + T+ AG + F+ + + + G ++++ + Sbjct: 161 VSSEIPDRAWSSGFE-WITDYAGKTVWFVASVKMSNEIAQCLQRAGKRVIQLNRKSYDTE 219 Query: 342 YPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGF-SKQK 400 YP VI+T+I+E G V+D K Sbjct: 220 YP--------------------KCKNGDWDFVITTDISEMGANF-GASRVIDCRKSVKPT 258 Query: 401 VYNPRIRVESLLV-SPISKASAQQRAGRAGR--TRPGKCFRLYTEEAFQKELIEQ-SYPE 456 + + L V S I+ ASA QR GR GR ++ G + + ++ + + Sbjct: 259 ILDEGEGRVILSVPSAITSASAAQRRGRVGRNPSQIGDEYHYGGGTSEDDTMLAHWTEAK 318 Query: 457 ILRSNLS 463 IL N+ Sbjct: 319 ILLDNIH 325 >2ZJO-A nrPDB Length = 482 Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats. Identities = 57/317 (17%), Positives = 101/317 (31%), Gaps = 72/317 (22%) Query: 110 QIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLG 169 Q+ TGSGK+T++P + +V P A + +++ V Sbjct: 43 QVAHLHAPTGSGKSTKVP------AAYAAQGYKVLVLNPSVAATLGFGAYMSKAHGVDP- 95 Query: 170 EEVGYSIRFENKT-SNKTILKYMTDGMLLREAMEDHDLSR--YSCIILDEAHERTLATDI 226 +IR +T + + Y T G L D S Y I+ DE H T + Sbjct: 96 -----NIRTGVRTITTGAPITYSTYGKFL----ADGGCSGGAYDIIMCDECHSTDSTTIL 146 Query: 227 LMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDY 286 +G + + +++ +AT + VP +P + Sbjct: 147 GIGTVLDQAETAGARLVVLATAT-----------PPGSVTVP---HP-----------NI 181 Query: 287 LDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYG 346 + A+ +I +A I G I +K + D+L + + Y Sbjct: 182 EEIALSNTGEIPFYGKAIPIETIKGGRHLIFCHSKK---KCDELAAKLSALGIHAVAYYR 238 Query: 347 SLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTID-------------GIVYVVD 393 L S G VV++T+ T T D + + +D Sbjct: 239 GLD------------VSVIPASGNVVVVATDALMTGFTGDFDSVIDCNTCVTQTVDFSLD 286 Query: 394 PGFSKQKVYNPRIRVES 410 P F+ + P+ V Sbjct: 287 PTFTIETTTMPQDAVSR 303 >2Z83-A nrPDB Length = 459 Score = 58.6 bits (140), Expect = 1e-08, Method: Composition-based stats. Identities = 71/333 (21%), Positives = 116/333 (34%), Gaps = 56/333 (16%) Query: 104 KLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEE 163 + + Q+ V GSGKT +I ++ D + + + A P RV A +A+ + Sbjct: 16 NMLRKRQMTVLDLHPGSGKTRKILPQIIKDAI--QQRLRTAVLAPTRVVAAEMAEALR-- 71 Query: 164 MDVKLGEEVGYSIR-FENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTL 222 G V Y + + I+ M L M + + Y+ ++DEAH Sbjct: 72 -----GLPVRYQTSAVQREHQGNEIVDVMCHATLTHRLMSPNRVPNYNLFVMDEAHFTDP 126 Query: 223 ATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTP-- 280 A+ G + V+ I M+AT PG T P P Sbjct: 127 ASIAARGYIATKVELGEA-AAIFMTATP-----------------PGTTDPFPDSNAPIH 168 Query: 281 EFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLS 340 + Q + D A + + TE AG + F+ + + G ++++ + Sbjct: 169 DLQDEIPDRAWSSGYE-WITEYAGKTVWFVASVKMGNEIAMCLQRAGKKVIQLNRKSYDT 227 Query: 341 VYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQK 400 YP VI+T+I+E G V+D K Sbjct: 228 EYP--------------------KCKNGDWDFVITTDISEMGANF-GASRVIDC-RKSVK 265 Query: 401 VYNPRIRVESLLV---SPISKASAQQRAGRAGR 430 +++ SPI+ ASA QR GR GR Sbjct: 266 PTILEEGEGRVILGNPSPITSASAAQRRGRVGR 298 >4OK6-A nrPDB Length = 464 Score = 57.8 bits (138), Expect = 1e-08, Method: Composition-based stats. Identities = 67/351 (19%), Positives = 118/351 (33%), Gaps = 66/351 (18%) Query: 110 QIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLG 169 Q+ TGSGK+T++P + +V P A + +++ V Sbjct: 32 QVAHLHAPTGSGKSTKVP------AAYAAQGYKVLVLNPSVAATLGFGAYMSKAHGVDP- 84 Query: 170 EEVGYSIRFENKT-SNKTILKYMTDGMLLREAMEDHDLSR--YSCIILDEAHERTLATDI 226 +IR +T + + + Y T G L D S Y II DE H + + Sbjct: 85 -----NIRTGVRTITTGSPITYSTYGKFL----ADGGCSGGAYDIIICDECHSTDATSIL 135 Query: 227 LMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDY 286 +G + + +++ +AT + V ++P + Sbjct: 136 GIGTVLDQAETAGARLVVLATAT-----------PPGSVTV---SHP-----------NI 170 Query: 287 LDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYG 346 + A+ T +I +A + + G I +K + D+L + ++ Y Sbjct: 171 EEVALSTTGEIPFYGKAIPLEVIKGGRHLIFCHSKK---KCDELAAKLVALGINAVAYYR 227 Query: 347 SLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPG----FSKQKVY 402 L S G VV+ST+ T T V+D + Sbjct: 228 GLD------------VSVIPTNGDVVVVSTDALMTGFT-GDFDSVIDCNTCVTQTVDFSL 274 Query: 403 NPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQS 453 +P +E+ P S QR GR GR +PG +R + + S Sbjct: 275 DPTFTIET-TTLPQDAVSRTQRRGRTGRGKPGI-YRFVAPGERPSGMFDSS 323 >4B6E-A nrPDB Length = 683 Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats. Identities = 57/318 (17%), Positives = 98/318 (30%), Gaps = 74/318 (23%) Query: 110 QIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLG 169 Q+ TGSGK+T++P + +V P A + +++ + Sbjct: 233 QVAHLHAPTGSGKSTKVP------AAYAAQGYKVLVLNPSVAATLGFGAYMSKAHGIDP- 285 Query: 170 EEVGYSIRFENKT-SNKTILKYMTDGMLLREAMEDHDLSR--YSCIILDEAHERTLATDI 226 +IR +T + + Y T G L D S Y II DE H T + Sbjct: 286 -----NIRTGVRTITTGAPVTYSTYGKFL----ADGGCSGGAYDIIICDECHSTDSTTIL 336 Query: 227 LMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDY 286 +G + + +++ +AT + VP +P E Sbjct: 337 GIGTVLDQAETAGARLVVLATAT-----------PPGSVTVP---HP----NIEEVALSN 378 Query: 287 LDSAIRTVLQIHATEEAGDI-LLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLY 345 I G L+F + + ++ K+S G V +SV P Sbjct: 379 TGEIPFYGKAIPIEAIRGGRHLIFCHSKKKCDELAAKLSGLGINAVAYYRGLDVSVIP-- 436 Query: 346 GSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTID-------------GIVYVV 392 G VV++T+ T T D + + + Sbjct: 437 ---------------------TIGDVVVVATDALMTGYTGDFDSVIDCNTCVTQTVDFSL 475 Query: 393 DPGFSKQKVYNPRIRVES 410 DP F+ + P+ V Sbjct: 476 DPTFTIETTTVPQDAVSR 493 >5K8T-A nrPDB Length = 458 Score = 57.1 bits (136), Expect = 3e-08, Method: Composition-based stats. Identities = 73/357 (20%), Positives = 124/357 (34%), Gaps = 61/357 (17%) Query: 88 KIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQ 147 + E PV L + Q+ V G+GKT ++ ++ + + + Sbjct: 6 RREEETPVECFEPSML---KKKQLTVLDLHPGAGKTRRVLPEIVREAI--KTRLRTVILA 60 Query: 148 PRRVAAMSVAQRVAEEMDVKL-GEEVGYSIRFENKTSNKT-ILKYMTDGMLLREAMEDHD 205 P RV VA EM+ L G V Y N T + T I+ M ++ Sbjct: 61 PTRV--------VAAEMEEALRGLPVRYMTTAVNVTHSGTEIVDLMCHATFTSRLLQPIR 112 Query: 206 LSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLL 265 + Y+ I+DEAH ++ G + V+ I M+AT + +++P++ Sbjct: 113 VPNYNLYIMDEAHFTDPSSIAARGYISTRVEMGEA-AAIFMTATPPGTRDAFPDSNSPIM 171 Query: 266 AVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGE---DEIEDAVRK 322 VE+ +R + T+ +G + F+ +EI + K Sbjct: 172 DTE-----VEV-----PERAWSSGFDW------VTDHSGKTVWFVPSVRNGNEIAACLTK 215 Query: 323 ISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETS 382 QL R+ F+ V++T+I+E Sbjct: 216 AGKRVIQLSRKTFETE------------------FQKTKHQEWDF-----VVTTDISEMG 252 Query: 383 LTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGR--TRPGKCF 437 V+D + V RV P++ ASA QR GR GR +PG + Sbjct: 253 ANFKA-DRVIDSRRCLKPVILDGERVILAGPMPVTHASAAQRRGRIGRNPNKPGDEY 308 >2QEQ-A nrPDB Length = 434 Score = 56.3 bits (134), Expect = 4e-08, Method: Composition-based stats. Identities = 69/333 (20%), Positives = 111/333 (33%), Gaps = 64/333 (19%) Query: 108 NNQIMVFVGETGSGKTTQI-PQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDV 166 QI V G+GKT +I PQ + L + A P RV A +A+ + Sbjct: 1 KKQITVLDLHPGAGKTRRILPQIIKEAINRRL---RTAVLAPTRVVAAEMAEALR----- 52 Query: 167 KLGEEVGYSIRFENKT-----SNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERT 221 G IR++ + I+ M L M H + Y+ ++DEAH Sbjct: 53 ------GLPIRYQTSAVAREHNGNEIVDVMCHATLTHRLMSPHRVPNYNLFVMDEAHFTD 106 Query: 222 LATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTP- 280 A+ G + V+ I M+AT PG + P P Sbjct: 107 PASIAARGYISTRVELGEA-AAIFMTATP-----------------PGTSDPFPESNAPI 148 Query: 281 -EFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPL 339 + Q + D A + + TE G + F+ + + G ++++ Sbjct: 149 SDLQTEIPDRAWNSGYE-WITEYIGKTVWFVPSVKMGNEIALCLQRAGKKVIQLNRKSYE 207 Query: 340 SVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQ 399 + YP V++T+I+E V+D S + Sbjct: 208 TEYP--------------------KCKNDDWDFVVTTDISEMGANFKASR-VIDSRKSVK 246 Query: 400 KVYNPRIRVESLLVSP--ISKASAQQRAGRAGR 430 +L P ++ ASA QR GR GR Sbjct: 247 PTIITEGEGRVILGEPSAVTAASAAQRRGRTGR 279 >2BMF-A nrPDB Length = 451 Score = 55.5 bits (132), Expect = 8e-08, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 114/334 (34%), Gaps = 58/334 (17%) Query: 104 KLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEE 163 +++ ++ + G+GKT + ++ + + + P RV VA E Sbjct: 14 DIFRKKRLTIMDLHPGAGKTKRYLPAIVREAIKR--GLRTLILAPTRV--------VAAE 63 Query: 164 MDVKL-GEEVGYS---IRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHE 219 M+ L G + Y IR E+ + + I+ M + + Y+ II+DEAH Sbjct: 64 MEEALRGLPIRYQTPAIRAEH--TGREIVDLMCHATFTMRLLSPIRVPNYNLIIMDEAHF 121 Query: 220 RTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYT 279 A+ G + V+ I M+AT + ++AP++ E Sbjct: 122 TDPASIAARGYISTRVEMGEAAG-IFMTATPPGSRDPFPQSNAPIMD--------EEREI 172 Query: 280 PEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPL 339 PE + + G + F+ D + G +++ Sbjct: 173 PERSWNSGHEWVTDF--------KGKTVWFVPSIKAGNDIAACLRKNGKKVI-------- 216 Query: 340 SVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQ 399 Q R + V++T+I+E V+DP Sbjct: 217 ------------QLSRKTFDSEYIKTRTNDWDFVVTTDISEMGANFKAER-VIDP-RRCM 262 Query: 400 KVYNPRIRVESLLV---SPISKASAQQRAGRAGR 430 K E +++ P++ +SA QR GR GR Sbjct: 263 KPVILTDGEERVILAGPMPVTHSSAAQRRGRVGR 296 >1HV8-A nrPDB Length = 367 Score = 54.0 bits (128), Expect = 2e-07, Method: Composition-based stats. Identities = 63/348 (18%), Positives = 121/348 (34%), Gaps = 57/348 (16%) Query: 112 MVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEE 171 +V TGSGKT ++ + + T P R A+ VA + K + Sbjct: 47 IVAQARTGSGKTASFAIPLIELVNENNGIEAIILT-PTRELAIQVADEIESLKGNKNLKI 105 Query: 172 V----GYSIRFENKTSNKTILKYMTDGMLLREAMEDHD-LSRYSCIILDEAHERTLATDI 226 G +I + K + T G +L L ILDEA E + Sbjct: 106 AKIYGGKAIYPQIKALKNANIVVGTPGRILDHINRGTLNLKNVKYFILDEADEM-----L 160 Query: 227 LMGLLKQVVKR----RPDLKIIIMSATLDAEKF---QRYFNDAPLLAVPGRTYPVELYYT 279 MG +K V K D +I++ SAT+ E ++Y D +E Y Sbjct: 161 NMGFIKDVEKILNACNKDKRILLFSATMPREILNLAKKYMGDY-SFIKAKINANIEQSYV 219 Query: 280 PEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPL 339 + + ++ R + L+F + + ++ + + + G Sbjct: 220 EVNENERFEALCRL-----LKNKEFYGLVFCKTKRDTKELASMLR----DIGFKAGA--- 267 Query: 340 SVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQ 399 ++G L Q++++ + +++I+T++ + ++ + V+ Sbjct: 268 ----IHGDLSQSQREKVIR-----LFKQKKIRILIATDVMSRGIDVNDLNCVI------- 311 Query: 400 KVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQK 447 + P+ P S R GRAG + GK + ++K Sbjct: 312 NYHLPQN--------PESYMHRIGRTGRAG--KKGKAISIINRREYKK 349 >6C90-A nrPDB Length = 734 Score = 54.0 bits (128), Expect = 2e-07, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 85/218 (38%), Gaps = 32/218 (14%) Query: 77 REFTPKYVDILKIRRELP--VHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDE 134 P+ + K +E P + A + E ++ NNQ ++ T +GKT ++ + Sbjct: 56 LPLKPR---VGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTV-CAEYAIALA 111 Query: 135 MPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDG 194 + E +V T P + + + + EE ++VG + + + MT Sbjct: 112 LR--EKQRVIFTSPIKALSNQKYREMYEEF-----QDVGL-MTGDVTINPTASCLVMTTE 163 Query: 195 MLLREAMEDHD-LSRYSCIILDEAH-----ERTLATDILMGLLKQVVKRRPDLKIIIMSA 248 +L + + + +I DE H ER + + + LL ++ + +SA Sbjct: 164 ILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPD------NVHYVFLSA 217 Query: 249 TL-DAEKFQRYF-----NDAPLLAVPGRTYPVELYYTP 280 T+ +A +F + ++ R P++ Y P Sbjct: 218 TIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFP 255 >2WZQ-A nrPDB Length = 619 Score = 53.2 bits (126), Expect = 4e-07, Method: Composition-based stats. Identities = 61/337 (18%), Positives = 108/337 (32%), Gaps = 64/337 (18%) Query: 104 KLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEE 163 +++ ++ + G+GKT +I ++ + + + P RV VA E Sbjct: 182 DIFRKKRLTIMDLHPGAGKTKRILPSIVREALKR--RLRTLILAPTRV--------VAAE 231 Query: 164 MDVKLGEEVGYSIRFEN--KTSNKTI---LKYMTDGMLLREAMEDHDLSRYSCIILDEAH 218 M+ L G IR++ S+ T + M + + Y+ I++DEAH Sbjct: 232 MEEALR---GLPIRYQTPAVKSDHTGREIVDLMCHATFTTRLLSSTRVPNYNLIVMDEAH 288 Query: 219 ERTLATDILMGLLKQVVKRRP--DLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVEL 276 + + R + I M+AT P P+E Sbjct: 289 FTD---PCSVAARGYISTRVEMGEAAAIFMTAT----------PPGSTDPFPQSNSPIED 335 Query: 277 YYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGC 336 +R + T T+ G + F+ D + G +++ Sbjct: 336 IEREIPERSW-----NTGFD-WITDYQGKTVWFVPSIKAGNDIANCLRKSGKRVI----- 384 Query: 337 GPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGF 396 Q R V++T+I+E V+DP Sbjct: 385 ---------------QLSRKTFDTEYPKTKLTDWDFVVTTDISEMGANFRAGR-VIDP-R 427 Query: 397 SKQKVYNPRIRVESLLV---SPISKASAQQRAGRAGR 430 K E +++ P++ ASA QR GR GR Sbjct: 428 RCLKPVILTDGPERVILAGPIPVTPASAAQRRGRIGR 464 >2VSX-A nrPDB Length = 395 Score = 53.2 bits (126), Expect = 4e-07, Method: Composition-based stats. Identities = 50/309 (16%), Positives = 110/309 (35%), Gaps = 28/309 (9%) Query: 94 PVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAA 153 P Q+ + + + + ++ ++G+GKT L ++ Q P R A Sbjct: 45 PSAIQQRAIMPIIEGHDVLA-QAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELA 103 Query: 154 MSVAQRV---AEEMDVKLGEEVGYSIRFENKTS-NKTILKYMTDGMLLREAMEDH-DLSR 208 + + + V A MD+K+ +G + E+ + T G + + Sbjct: 104 LQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGLRDAQIVVGTPGRVFDNIQRRRFRTDK 163 Query: 209 YSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVP 268 ILDEA E L++ + + P +++++SAT+ + + + Sbjct: 164 IKMFILDEADE-MLSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDVLE--------VTTK 214 Query: 269 GRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKI----S 324 PV + ++D L ++ EE D I I Sbjct: 215 FMRNPVRIL----VKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVTQAVIFCNTR 270 Query: 325 LEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLT 384 + ++L + +V +Y LP ++ I + +++IST++ + Sbjct: 271 RKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMK-----EFRSGSSRILISTDLLARGID 325 Query: 385 IDGIVYVVD 393 + + V++ Sbjct: 326 VQQVSLVIN 334 >4KBG-A nrPDB Length = 365 Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats. Identities = 64/339 (18%), Positives = 117/339 (34%), Gaps = 50/339 (14%) Query: 74 FTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFD 133 F P+ ++ L R + L L + ++ TG+GKT + Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAER 62 Query: 134 EMP---HLENTQVACTQPRRVAAMSVA----------QRVAEEMDVKLGEEVGYSIRFEN 180 P + P R A+ VA + VA G++ +R + Sbjct: 63 LAPSQERGRKPRALVLTPTRELALQVASELTAVAPHLKVVAVYGGTGYGKQKEALLRGAD 122 Query: 181 --KTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHER-TLATDILMGLLKQVVKR 237 + L Y+ G+L DLSR +LDEA E ++ + + L Sbjct: 123 AVVATPGRALDYLRQGVL--------DLSRVEVAVLDEADEMLSMGFEEEVEALLSATP- 173 Query: 238 RPDLKIIIMSATLD--AEKFQRYFNDAPLLAVPGRTYPV--ELYYTPEFQRDYLDSAIRT 293 P + ++ SATL A++ + P+L + PV E P R L+ Sbjct: 174 -PSRQTLLFSATLPSWAKRLAERYMKNPVLINVIKDEPVTYEEEAVPAPVRGRLEVL--- 229 Query: 294 VLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQ 353 LL++ D + E +++ + L+G L ++ Sbjct: 230 -----------SDLLYVASPDRAM-VFTRTKAETEEIAQGLLRLGHPAQALHGDLSQGER 277 Query: 354 QRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVV 392 +R+ + +V+++T++A L I + VV Sbjct: 278 ERVL-----GAFRQGEVRVLVATDVAARGLDIPQVDLVV 311 >2JLW-A nrPDB Length = 451 Score = 51.7 bits (122), Expect = 1e-06, Method: Composition-based stats. Identities = 61/337 (18%), Positives = 109/337 (32%), Gaps = 64/337 (18%) Query: 104 KLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEE 163 +++ ++ + G+GKT +I ++ + + + P RV VA E Sbjct: 14 DIFRKKRLTIMDLHPGAGKTKRILPSIVREALKR--RLRTLILAPTRV--------VAAE 63 Query: 164 MDVKLGEEVGYSIRFEN--KTSNKTI---LKYMTDGMLLREAMEDHDLSRYSCIILDEAH 218 M+ L G IR++ S+ T + M + + Y+ I++DEAH Sbjct: 64 MEEALR---GLPIRYQTPAVKSDHTGREIVDLMCHATFTTRLLSSTRVPNYNLIVMDEAH 120 Query: 219 ERTLATDILMGLLKQVVKRRP--DLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVEL 276 + + R + I M+AT + P P+E Sbjct: 121 FTD---PCSVAARGYISTRVEMGEAAAIFMTAT----------PPGSIDPFPQSNSPIED 167 Query: 277 YYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGC 336 +R + T T+ G + F+ D + G +++ Sbjct: 168 IEREIPERSW-----NTGFD-WITDYQGKTVWFVPSIKAGNDIANCLRKSGKRVI----- 216 Query: 337 GPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGF 396 Q R V++T+I+E V+DP Sbjct: 217 ---------------QLSRKTFDTEYPKTKLTDWDFVVTTDISEMGANFRAGR-VIDP-R 259 Query: 397 SKQKVYNPRIRVESLLV---SPISKASAQQRAGRAGR 430 K E +++ P++ ASA QR GR GR Sbjct: 260 RCLKPVILTDGPERVILAGPIPVTPASAAQRRGRIGR 296 >2V6J-A nrPDB Length = 431 Score = 50.9 bits (120), Expect = 2e-06, Method: Composition-based stats. Identities = 63/314 (20%), Positives = 113/314 (35%), Gaps = 51/314 (16%) Query: 119 GSGKTTQI-PQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIR 177 G+GKT ++ PQ V L + P RV A + + E + V Sbjct: 12 GAGKTRRVLPQLVREAVKKRL---RTVILAPTRVVASETYEALRGEPIRYMTPAV----- 63 Query: 178 FENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLLKQVVKR 237 +++ + I+ +M + ++ + Y+ I+DEAH A+ G ++ V Sbjct: 64 -QSERTGNEIVDFMCHSTFTMKLLQGVRVPNYNLYIMDEAHFLDPASVAARGYIETRVSM 122 Query: 238 RPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQI 297 D I M+AT +++P++ E P D A + + Sbjct: 123 -GDAGAIFMTATPPGTTEAFPPSNSPIID--------EETRIP-------DKAWNSGYE- 165 Query: 298 HATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIF 357 TE G + F+ + + + G +++ S YP Sbjct: 166 WITEFDGRTVWFVHSIKQGAEIGTCLQKAGKKVLYLNRKTFESEYP-------------- 211 Query: 358 EPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFS-KQKVYNPRIRVESLLVSPI 416 VI+T+I+E V+DP + K + + R+ ++ + I Sbjct: 212 ------KCKSEKWDFVITTDISEMGANFKA-DRVIDPRKTIKPILLDGRVSMQGPI--AI 262 Query: 417 SKASAQQRAGRAGR 430 + ASA QR GR GR Sbjct: 263 TPASAAQRRGRIGR 276 >5WDX-A nrPDB Length = 649 Score = 50.9 bits (120), Expect = 2e-06, Method: Composition-based stats. Identities = 48/290 (16%), Positives = 88/290 (30%), Gaps = 58/290 (20%) Query: 107 QNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDV 166 Q Q+ TGSGK+T++P + +V P A + +++ + Sbjct: 213 QTYQVGYLHAPTGSGKSTKVP------VAYAAQGYKVLVLNPSVAATLGFGAYLSKAHGI 266 Query: 167 KLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDI 226 G T + Y T G L + Y II DE H + + Sbjct: 267 NPNIRTGVRT---VMTGEA--ITYSTYGKFLADGGCASG--AYDIIICDECHAVDATSIL 319 Query: 227 LMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYP--VELYYTPEFQR 284 +G + + ++ +AT + P +P E+ E + Sbjct: 320 GIGTVLDQAETAGVRLTVLATAT-----------PPGSVTTP---HPDIEEVGLGREGEI 365 Query: 285 DYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPL 344 + AI + + G L+F + + ++ + G V +S+ P Sbjct: 366 PFYGRAIPL-----SCIKGGRHLIFCHSKKKCDELAAALRGMGLNAVAYYRGLDVSIIP- 419 Query: 345 YGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDP 394 G VV++T+ T T V+D Sbjct: 420 ----------------------AQGDVVVVATDALMTGYT-GDFDSVIDC 446 >2DB3-A nrPDB Length = 434 Score = 50.5 bits (119), Expect = 3e-06, Method: Composition-based stats. Identities = 77/394 (19%), Positives = 145/394 (36%), Gaps = 83/394 (21%) Query: 103 LKLYQNNQIMVFVGETGSGKTTQ--IPQFVLFDEMPH---LENTQVACTQPRRVAAMSV- 156 + + + + ++ +TGSGKT +P E PH L QV P R A+ + Sbjct: 87 IPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIF 146 Query: 157 --AQRVAEEMDVKLGEEVG-YSIRFEN-KTSNKTILKYMTDGMLL----REAMEDHDLSR 208 A++ A E +K+G G S R +N + + T G LL R + D Sbjct: 147 NEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDTR- 205 Query: 209 YSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVP 268 ++LDEA +R L + D++ I+ T+ E F+ Sbjct: 206 --FVVLDEA-DRMLD-----------MGFSEDMRRIMTHVTMRPEHQTLMFSA------- 244 Query: 269 GRTYPVEL-YYTPEFQRDYLDSAI-----------RTVLQIHATEEAGDILLFLTGEDEI 316 T+P E+ EF ++Y+ AI +T+ +++ + ++ L+ + + Sbjct: 245 --TFPEEIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVNKYAKRSKLIEILSEQADG 302 Query: 317 EDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVIST 376 + D L ++G Q+++ KV+I+T Sbjct: 303 TIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALR-----DFKNGSMKVLIAT 357 Query: 377 NIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTR-PGK 435 ++A L I I +V++ Y+ +++ + R GR GR G+ Sbjct: 358 SVASRGLDIKNIKHVIN--------YDMPSKIDDYV----------HRIGRTGRVGNNGR 399 Query: 436 CFRLYTEEAFQKELIE---------QSYPEILRS 460 + E + + Q+ P+ LR+ Sbjct: 400 ATSFFDPEKDRAIAADLVKILEGSGQTVPDFLRT 433 >1OYY-A nrPDB Length = 523 Score = 48.6 bits (114), Expect = 9e-06, Method: Composition-based stats. Identities = 70/350 (20%), Positives = 126/350 (36%), Gaps = 68/350 (19%) Query: 99 RDEFLKLYQNNQIMVFVGETGSGKTT--QIPQFVLF------DEMPHLENTQVACTQPRR 150 ++E + + + + V TG GK+ QIP +L + L QV Q Sbjct: 30 QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANG 89 Query: 151 VAA--MSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSR 208 VAA ++ Q ++++V G G IR + M D L A + L Sbjct: 90 VAAACLNSTQTREQQLEVMTGCRTG-QIRLLYIAPER----LMLDNFLEHLAHWNPVL-- 142 Query: 209 YSCIILDEAHERT-LATDI--LMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFN----D 261 + +DEAH + D L Q+ +R P L + ++AT D Q + Sbjct: 143 ---LAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLN 199 Query: 262 APLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAG-DILLFLTGEDEIEDAV 320 PL+ + P Y E + LD +R + E+ G +++ ++ED Sbjct: 200 DPLIQISSFDRPNIRYMLMEKFKP-LDQLMR-----YVQEQRGKSGIIYCNSRAKVEDTA 253 Query: 321 RKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAE 380 ++ +G +S + L + + + + R ++V++T Sbjct: 254 ARLQSKG-----------ISAAAYHAGLENNVRADV-----QEKFQRDDLQIVVATVAFG 297 Query: 381 TSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGR 430 + + +VV ++ +ES Q GRAGR Sbjct: 298 MGINKPNVRFVV--------HFDIPRNIESYY----------QETGRAGR 329 >3FHO-A nrPDB Length = 508 Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats. Identities = 65/369 (17%), Positives = 127/369 (34%), Gaps = 41/369 (11%) Query: 97 AQRDEFLKLYQNNQIMVFVGET--GSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAM 154 +++ L L +N +G++ G+GKT +L + Q C P R A Sbjct: 144 KIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFALTMLSRVDASVPKPQAICLAPSRELAR 203 Query: 155 SVAQRVAEEMDVKLGEEVGYSIRFENKTSNK--TILKYMTDGMLLREAM-EDHDLSRYSC 211 + V EM + + I+ K + T G ++ D Sbjct: 204 QIMD-VVTEMGKYTEVKTAFGIKDSVPKGAKIDAQIVIGTPGTVMDLMKRRQLDARDIKV 262 Query: 212 IILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDA--EKFQRYFNDAPLLAVPG 269 +LDEA + ++ + +I++ SAT EK+ F Sbjct: 263 FVLDEADNMLDQQGLGDQSMRIKHLLPRNTQIVLFSATFSERVEKYAERFAP----NANE 318 Query: 270 RTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVR--KISLEG 327 E ++ Y+D + E ++L+ L G I ++ K Sbjct: 319 IRLKTEELSVEGIKQLYMDC--------QSEEHKYNVLVELYGLLTIGQSIIFCKKKDTA 370 Query: 328 DQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDG 387 +++ R +V L G+L Q+ I + KV+++TN+ + + Sbjct: 371 EEIARRMTADGHTVACLTGNLEGAQRDAIMD-----SFRVGTSKVLVTTNVIARGIDVSQ 425 Query: 388 IVYVV--DPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAF 445 + VV D + +P+ + + R GR GR F ++ ++++ Sbjct: 426 VNLVVNYDMPLDQAGRPDPQTYLHRIG-----------RTGRFGRVGVSINF-VHDKKSW 473 Query: 446 QKELIEQSY 454 ++ Q Y Sbjct: 474 EEMNAIQEY 482 >3PEW-A nrPDB Length = 395 Score = 46.7 bits (109), Expect = 3e-05, Method: Composition-based stats. Identities = 81/370 (21%), Positives = 134/370 (36%), Gaps = 71/370 (19%) Query: 94 PVHAQRDEFLKLYQNNQI-MVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVA 152 P Q L N M+ ++G+GKT +L P + Q C P R Sbjct: 28 PSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSREL 87 Query: 153 AMSVAQRVAEEMD--VKLGEEVGYSIRFENKTSNKTILKYMTDGMLL----REAMEDHDL 206 A + V +EM K+ ++ FE + T G +L R+ M L Sbjct: 88 ARQTLE-VVQEMGKFTKITSQLIVPDSFEKNKQINAQVIVGTPGTVLDLMRRKLM---QL 143 Query: 207 SRYSCIILDEAHERTLATDILMGLLKQVVKRRP-DLKIIIMSATLDAEKFQRY----FND 261 + +LDEA + L L +V + P D ++++ SAT A+ ++Y + Sbjct: 144 QKIKIFVLDEA-DNMLDQQGLGDQCIRVKRFLPKDTQLVLFSATF-ADAVRQYAKKIVPN 201 Query: 262 APLLAVPGRTYPVE----LYYTPEFQRDYLDS--AIRTVLQIHATEEAGDILLFLTGEDE 315 A L + V+ LY + + D D + V+ I G ++F+ + Sbjct: 202 ANTLELQTNEVNVDAIKQLYMDCKNEADKFDVLTELYGVMTI------GSSIIFVATKKT 255 Query: 316 IEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGR-KVVI 374 K+ EG ++ L+G L ++ R+ + + R GR KV+I Sbjct: 256 ANVLYGKLKSEGHEVSI-----------LHGDLQTQERDRLID------DFREGRSKVLI 298 Query: 375 STNIAETSLTIDGIVYVVD-------PGFSKQKVYNPRIRVESLLVSPISKASAQQRAGR 427 +TN+ + I + VV+ G + Y RI R GR Sbjct: 299 TTNVLARGIDIPTVSMVVNYDLPTLANGQADPATYIHRIG----------------RTGR 342 Query: 428 AGRTRPGKCF 437 GR F Sbjct: 343 FGRKGVAISF 352 >5IVL-B nrPDB Length = 429 Score = 46.3 bits (108), Expect = 5e-05, Method: Composition-based stats. Identities = 78/427 (18%), Positives = 162/427 (37%), Gaps = 74/427 (17%) Query: 108 NNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVK 167 N+ ++ +TG+GKT ++ Q P R A+ V++ + + VK Sbjct: 38 QNKDVIGQAQTGTGKTAAFGIPIVEKVDVKNGAIQALVVAPTRELAIQVSEELYKIGAVK 97 Query: 168 L--------GEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD-LSRYSCIILDEAH 218 G+++ IR + T G ++ L ++LDEA Sbjct: 98 RVRVLPIYGGQDIERQIRA---LKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEAD 154 Query: 219 ERTLATDILMGLLKQ---VVKRRP-DLKIIIMSATLDA--EKFQRYFNDAP-LLAVPGR- 270 E + MG ++ ++ P + + ++ SAT+ + F + P L+ V + Sbjct: 155 EM-----LNMGFIEDIEAILSHVPAERQTLLFSATMPDPIRRIAERFMNEPELVKVKAKE 209 Query: 271 -TYP-VELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGD 328 T P ++ YY ++ D + +L I A E A ++F + +++ ++L G Sbjct: 210 MTVPNIQQYYLEVHEKKKFDI-LTRLLDIQAPELA---IVFGRTKRRVDELAEALNLRGY 265 Query: 329 QLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGI 388 + ++G L ++ + E +++++T++A L I G+ Sbjct: 266 -----------AAEGIHGDLSQAKRLSVLRKFKEGAI-----EILVATDVAARGLDISGV 309 Query: 389 VYVVDPGFSKQ-KVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQK 447 +V + + + Y RI R GRAG+T F E Sbjct: 310 THVYNFDIPQDPESYVHRIG----------------RTGRAGKTGVAMTFVTPREIGQLH 353 Query: 448 ELIEQSYPEILRSN---LSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACL 504 + + ++ R L + +++ I+ L++ ++ RA EEL L Sbjct: 354 HIERTTKRKMERMKPPTLDEALEGQQRIAIEKLLN--VVETENLSFYKRAAEEL-----L 406 Query: 505 DDEGNLT 511 ++ ++T Sbjct: 407 EEHDSVT 413 >1GM5-A nrPDB Length = 780 Score = 45.9 bits (107), Expect = 7e-05, Method: Composition-based stats. Identities = 56/330 (16%), Positives = 116/330 (35%), Gaps = 51/330 (15%) Query: 113 VFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAE---EMDVKLG 169 + G+ GSGKT +L + Q A P + A+ +R E + ++ + Sbjct: 393 LLQGDVGSGKTVVAQLAILDNY---EAGFQTAFMVPTSILAIQHYRRTVESFSKFNIHVA 449 Query: 170 EEVGYSIRFENKTSNKTILKYMTDGMLL---REAMEDHDLSRYSCIILDEAHERTLATDI 226 +G + E K K+ L+ +++ ED +I+DE H + Sbjct: 450 LLIGATTPSE-KEKIKSGLRNGQIDVVIGTHALIQEDVHFKNLGLVIIDEQHRFGVKQRE 508 Query: 227 LMGLLKQVVKRRPDLKIIIMSAT-LDAEKFQRYFNDAPLLAV----PGRTYPVELYYTPE 281 + ++V ++MSAT + ++ D + + PGR + + Sbjct: 509 ALMNKGKMVD------TLVMSATPIPRSMALAFYGDLDVTVIDEMPPGRKEVQTMLVPMD 562 Query: 282 FQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSV 341 + + + V++ G + +E + K ++E + + +E + Sbjct: 563 RVNEVYEFVRQEVMRG------GQAFIVYPLIEESDKLNVKSAVEMYEYLSKEVFPEFKL 616 Query: 342 YPLYGSLPPHQQQRIFEPAPESHNGRPGRK-VVISTNIAETSLTIDGIVYVVDPGFSKQK 400 ++G L ++ R+ GR +++ST + E + + +V Sbjct: 617 GLMHGRLSQEEKDRVM------LEFAEGRYDILVSTTVIEVGIDVPRANVMV-------- 662 Query: 401 VYNPRIRVESLLVSPISKASAQQRAGRAGR 430 + NP A Q GR GR Sbjct: 663 IENPE---------RFGLAQLHQLRGRVGR 683 >4BRW-A nrPDB Length = 377 Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats. Identities = 64/338 (18%), Positives = 123/338 (36%), Gaps = 62/338 (18%) Query: 112 MVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEE 171 ++ + G+GKT L P L Q P R A+ +Q V + G Sbjct: 41 ILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQ-VVRTLGKHCGIS 99 Query: 172 V-----GYSIRFENKTSNKTI-LKYMTDGMLLREAMED-HDLSRYSCIILDEAHERTLAT 224 G ++R + N+T+ + T G +L A DLS S I+DEA ++ L+ Sbjct: 100 CMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEA-DKMLSR 158 Query: 225 DILMGLLKQVVKR-RPDLKIIIMSAT--LDAEKFQRYFNDAPL-------LAVPGRTYPV 274 D +++Q++ P + ++ SAT L ++F P L + G + Sbjct: 159 DFK-TIIEQILSFLPPTHQSLLFSATFPLTVDEFMDKHLHKPYEINLMEELTLKG----I 213 Query: 275 ELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREE 334 YY +R L ++ + ++F + +E +KI+ G Sbjct: 214 TQYYAFVEERQKLHCLNTLFSKLQINQA----IIFCNSTNRVELLAKKITDLGY------ 263 Query: 335 GCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDP 394 S Y + + ++ ++F + + ++ +++ + I + V++ Sbjct: 264 -----SCYYSHARMKQQERNKVFHEFRQGKV-----RTLVCSDLLTRGIDIQAVNVVINF 313 Query: 395 GFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTR 432 F P+ L R GR+GR Sbjct: 314 DF-------PKTAETYL-----------HRIGRSGRFG 333 >1YKS-A nrPDB Length = 440 Score = 44.4 bits (103), Expect = 2e-04, Method: Composition-based stats. Identities = 63/338 (18%), Positives = 102/338 (30%), Gaps = 69/338 (20%) Query: 105 LYQNNQIMVFVGETGSGKTTQ-IPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEE 163 + + V G+GKT + +PQ + L + P RV V E Sbjct: 4 MLKKGMTTVLDFHPGAGKTRRFLPQILAECARRRL---RTLVLAPTRV--------VLSE 52 Query: 164 MDVKLGEEVGYSIRFENKT-----SNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAH 218 M G ++F + S + ++ M L +E + + II+DEAH Sbjct: 53 MKEAFH---GLDVKFHTQAFSAHGSGREVIDAMCHATLTYRMLEPTRVVNWEVIIMDEAH 109 Query: 219 ERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYY 278 A+ G + I+M+AT F G V+ Sbjct: 110 FLDPASIAARGWAAHRARANES-ATILMTATPPGT--SDEFP-----HSNGEIEDVQTDI 161 Query: 279 TPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGP 338 E D + FL + G +V Sbjct: 162 PSEPWNTGHDWILADK------RPTA---WFLPSIRAANVMAASLRKAGKSVVVLN---- 208 Query: 339 LSVYPLYGSLPPHQQQRIFEPA-PESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFS 397 ++ FE P +P +++T+IAE + V+ Sbjct: 209 ---------------RKTFEREYPTIKQKKPD--FILATDIAEMGANL-----CVERVLD 246 Query: 398 KQKVYNPRIRVESLLVS-----PISKASAQQRAGRAGR 430 + + P + E V+ IS +SA QR GR GR Sbjct: 247 CRTAFKPVLVDEGRKVAIKGPLRISASSAAQRRGRIGR 284 >5GJU-A nrPDB Length = 205 Score = 43.2 bits (100), Expect = 4e-04, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 14/144 (9%) Query: 99 RDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQ 158 + E + N + ++ + +TGSGKT +L + P L+ Q+ P R A+ VA+ Sbjct: 28 QAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAE 87 Query: 159 RVAEEMDVKLGEEV-------GYSIRFENKTSNKTILKYMTDGMLLREAMEDH-DLSRYS 210 + + G V Y ++ + T G LL DLS+ S Sbjct: 88 AMTDFSKHMRGVNVVALYGGQRYDVQLRA-LRQGPQIVVGTPGRLLDHLKRGTLDLSKLS 146 Query: 211 CIILDEAHERTLATDILMGLLKQV 234 ++LDEA E + MG ++ V Sbjct: 147 GLVLDEADEM-----LRMGFIEDV 165 >5LBA-B nrPDB Length = 445 Score = 43.2 bits (100), Expect = 4e-04, Method: Composition-based stats. Identities = 62/375 (16%), Positives = 130/375 (34%), Gaps = 60/375 (16%) Query: 98 QRDEFLKLYQNNQIMVFVGETGSGKTT--QIPQFVLFDEMPHLENTQVACTQPRRVAAMS 155 Q + + + N+ + TG+GK+ Q+P +L + + + +A Q + ++ Sbjct: 26 QESATMAVVKGNKDVFVCMPTGAGKSLCYQLP-ALLAKGITIVVSPLIALIQDQVDHLLT 84 Query: 156 VAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGM-----LLREAMEDHDLSRYS 210 + RV+ +E + + +T + Y+T M S Sbjct: 85 LKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLS 144 Query: 211 CIILDEAH-----ERTLATDIL-MGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPL 264 +++DEAH D L +G L+ + P + ++AT + + F L Sbjct: 145 YLVVDEAHCVSQWGHDFRPDYLRLGALRSRLGHAP---CVALTATATPQVQEDVFAALHL 201 Query: 265 LAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGE--DEIEDAVR- 321 PV ++ TP F+ + + ++ G++ F E + + Sbjct: 202 ------KKPVAIFKTPCFRANLFYD---VQFKELISDPYGNLKDFCLKALGQEADKGLSG 252 Query: 322 ------KISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVIS 375 + +QL E C ++ + L ++ + ++ V+++ Sbjct: 253 CGIVYCRTREACEQLAIELSCRGVNAKAYHAGLKASERTLV-----QNDWMEEKVPVIVA 307 Query: 376 TNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRT-RPG 434 T + + +V +K S A Q +GRAGR +P Sbjct: 308 TISFGMGVDKANVRFVAHWNIAK------------------SMAGYYQESGRAGRDGKPS 349 Query: 435 KCFRLYTEEAFQKEL 449 C RLY + ++ Sbjct: 350 WC-RLYYSRNDRDQV 363 >5LB8-A nrPDB Length = 518 Score = 43.2 bits (100), Expect = 4e-04, Method: Composition-based stats. Identities = 62/375 (16%), Positives = 130/375 (34%), Gaps = 60/375 (16%) Query: 98 QRDEFLKLYQNNQIMVFVGETGSGKTT--QIPQFVLFDEMPHLENTQVACTQPRRVAAMS 155 Q + + + N+ + TG+GK+ Q+P +L + + + +A Q + ++ Sbjct: 26 QESATMAVVKGNKDVFVCMPTGAGKSLCYQLP-ALLAKGITIVVSPLIALIQDQVDHLLT 84 Query: 156 VAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGM-----LLREAMEDHDLSRYS 210 + RV+ +E + + +T + Y+T M S Sbjct: 85 LKVRVSSLNSKLSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLS 144 Query: 211 CIILDEAH-----ERTLATDIL-MGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPL 264 +++DEAH D L +G L+ + P + ++AT + + F L Sbjct: 145 YLVVDEAHCVSQWGHDFRPDYLRLGALRSRLGHAP---CVALTATATPQVQEDVFAALHL 201 Query: 265 LAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGE--DEIEDAVR- 321 PV ++ TP F+ + + ++ G++ F E + + Sbjct: 202 ------KKPVAIFKTPCFRANLFYD---VQFKELISDPYGNLKDFCLKALGQEADKGLSG 252 Query: 322 ------KISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVIS 375 + +QL E C ++ + L ++ + ++ V+++ Sbjct: 253 CGIVYCRTREACEQLAIELSCRGVNAKAYHAGLKASERTLV-----QNDWMEEKVPVIVA 307 Query: 376 TNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRT-RPG 434 T + + +V +K S A Q +GRAGR +P Sbjct: 308 TISFGMGVDKANVRFVAHWNIAK------------------SMAGYYQESGRAGRDGKPS 349 Query: 435 KCFRLYTEEAFQKEL 449 C RLY + ++ Sbjct: 350 WC-RLYYSRNDRDQV 363 >3EIQ-A nrPDB Length = 414 Score = 42.8 bits (99), Expect = 5e-04, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 109/312 (34%), Gaps = 32/312 (10%) Query: 94 PVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAA 153 P Q+ L + + + ++G+GKT +L L+ TQ P R A Sbjct: 63 PSAIQQRAILPCIKGYDV-IAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELA 121 Query: 154 MSVAQRVAEEMDVKLGEEV-----GYSIRFE--NKTSNKTILKYMTDGMLLREAMEDHDL 206 + Q+V + +G G ++R E + T G + + Sbjct: 122 QQI-QKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLS 180 Query: 207 SRY-SCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLL 265 +Y +LDEA E L+ + K + +++++SAT+ ++ + + Sbjct: 181 PKYIKMFVLDEADE-MLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLE--------V 231 Query: 266 AVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGED--EIEDAVRKI 323 P+ + +++ L I+ E + + I AV I Sbjct: 232 TKKFMRDPIRIL----VKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFI 287 Query: 324 --SLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAET 381 + D L + +V ++G + ++ I +V+I+T++ Sbjct: 288 NTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMR-----EFRSGSSRVLITTDLLAR 342 Query: 382 SLTIDGIVYVVD 393 + + + V++ Sbjct: 343 GIDVQQVSLVIN 354 >2VA8-A nrPDB Length = 715 Score = 42.4 bits (98), Expect = 6e-04, Method: Composition-based stats. Identities = 81/505 (16%), Positives = 162/505 (32%), Gaps = 90/505 (17%) Query: 73 PFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQ----NNQIMVFVGETGSGKTTQIPQ 128 P + ++I+K R + + + ++ TGSGKT I + Sbjct: 9 PIEDLKLPSNVIEIIKKRG---IKKLNPPQTEAVKKGLLEGNRLLLTSPTGSGKTL-IAE 64 Query: 129 FVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTIL 188 + + + T P R A++ + + + +G +V + + ++ L Sbjct: 65 MGIISFLLKNGGKAIYVT-PLR--ALTNEKYLTFKDWELIGFKVA--MTSGDYDTDDAWL 119 Query: 189 K-----YMTDGMLLREAMEDHD-LSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLK 242 K T L + L+ + +LDE H L +++ V R Sbjct: 120 KNYDIIITTYEKLDSLWRHRPEWLNEVNYFVLDELH--YLNDPERGPVVESVTIRAKRRN 177 Query: 243 IIIMSATLDAEKFQRYFNDAPLLAVPGRTYP-VELYYTPEFQRDYLDSAIR--TVLQIHA 299 ++ +SAT+ K + A +A R P +E PE ++ + + T ++H Sbjct: 178 LLALSATISNYKQIAKWLGAEPVATNWRPVPLIEGVIYPERKKKEYNVIFKDNTTKKVHG 237 Query: 300 TE-----------EAGDILLFLTGEDEIEDAVRKIS-----LEGDQLVREEGCGPLSVYP 343 + + G +L+F E KI+ + D+ E L Sbjct: 238 DDAIIAYTLDSLSKNGQVLVFRNSRKMAESTALKIANYMNFVSLDENALSEILKQLDDIE 297 Query: 344 LYGSLPPHQQQRIFEPAPESHNGRPGR---------------KVVISTNIAETSLTIDGI 388 GS + + H+ + KV+++T + + Sbjct: 298 EGGSDEKELLKSLISKGVAYHHAGLSKALRDLIEEGFRQRKIKVIVATPTLAAGVNLPAR 357 Query: 389 VYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKE 448 ++ +Y ++ I +Q +GRAGR PG Sbjct: 358 TVIIG------DIYRFNKKIAGYYDE-IPIMEYKQMSGRAGR--PG-------------- 394 Query: 449 LIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNY--LACLDD 506 + ++ + KK + D+ E+ + + L L Sbjct: 395 FDQIGESIVVVRDKEDVDRVFKKYVLSDV--------EPIESKLGSERAFYTFLLGILSA 446 Query: 507 EGNLTPLGRLASQFPLDPMLAVMLI 531 EGNL+ + F + +LA L+ Sbjct: 447 EGNLSE--KQLENFAYESLLAKQLV 469 >6B4I-E nrPDB Length = 430 Score = 42.4 bits (98), Expect = 7e-04, Method: Composition-based stats. Identities = 59/341 (17%), Positives = 119/341 (34%), Gaps = 56/341 (16%) Query: 110 QIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLG 169 Q ++ ++G+GKT +L P + Q C P A+ + + + Sbjct: 83 QNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPE 142 Query: 170 EEVGYSIRFENKTSNKTI---LKYMTDGMLLREA--MEDHDLSRYSCIILDEAHERTLAT 224 ++ Y++R + I + T G +L ++ D + +LDEA Sbjct: 143 LKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEA------- 195 Query: 225 DILMGLLK------QVVKRRP-DLKIIIMSATLDAE--KFQRYFNDAPLLAVPGRTY--- 272 D+++ ++ + P + ++++ SAT + KF + P + R Sbjct: 196 DVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETL 255 Query: 273 -PVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLV 331 ++ YY RD A+ + +A ++F ++S EG Q+ Sbjct: 256 DTIKQYYVLCSSRDEKFQALCNLYGAITIAQA---MIFCHTRKTASWLAAELSKEGHQVA 312 Query: 332 REEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYV 391 G + Q+ + E E KV+++TN+ + ++ + V Sbjct: 313 LLSGE-----------MMVEQRAAVIERFREGKE-----KVLVTTNVCARGIDVEQVSVV 356 Query: 392 VDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTR 432 ++ K NP + R GR GR Sbjct: 357 INFDLPVDKDGNPDNE------------TYLHRIGRTGRFG 385 >6CRM-A nrPDB Length = 541 Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats. Identities = 65/389 (16%), Positives = 126/389 (32%), Gaps = 81/389 (20%) Query: 102 FLKLYQNNQIMVFVGETGSGKTT--QIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQR 159 + + + V TG GK+ QIP V + + + V Q Sbjct: 53 IIDAVLEGRDCLVVMPTGGGKSLCYQIPALV-------KTGLTIVVSPLISLMKDQVDQL 105 Query: 160 VAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLL------REAMEDHDLSRYSC-- 211 +A + +++ + +L G + M D+ + Sbjct: 106 LANGVAAACLNST------QSREEQQAVLAGCRTGQVRLLYIAPERLMMDNFIDTLGYWD 159 Query: 212 ---IILDEAHERT-LATDI--LMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFN----D 261 + +DEAH + D L Q+ R P + + ++AT D + D Sbjct: 160 LAMVAVDEAHCISQWGHDFRPEYAALGQLRARFPAVPFMALTATADDTTRRDIVRLLGLD 219 Query: 262 APLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAG-DILLFLTGEDEIEDAV 320 PL+ + P Y E + LD +R + E+ G +++ ++ED Sbjct: 220 DPLIEISSFDRPNIRYMLMEKFKP-LDQLMR-----YVQEQRGKSGIIYCNSRAKVEDTA 273 Query: 321 RKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAE 380 ++ G +S + L + + + R ++V++T Sbjct: 274 ARLQSRG-----------ISAAAYHAGLEHEVRASV-----QEKFQRDDLQIVVATVAFG 317 Query: 381 TSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTR-PGKCFRL 439 + + +VV ++ +ES Q GRAGR P + Sbjct: 318 MGINKPNVRFVV--------HFDIPRNIESYY----------QETGRAGRDGLPAEAMLF 359 Query: 440 Y--TEEAFQKELIEQSYP----EILRSNL 462 Y + A+ + +E+ P +I R L Sbjct: 360 YDPADMAWLRRCLEEKAPGPLQDIERHKL 388 >2PL3-A nrPDB Length = 236 Score = 41.7 bits (96), Expect = 0.001, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 17/199 (8%) Query: 64 QKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKT 123 +K+ +I F+ + K + L+ + V + + + L + ++ +TGSGKT Sbjct: 17 EKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKT 76 Query: 124 TQIPQFVLFDEMP----HLENTQVACTQPRRVAA---MSVAQRVAEEMDVKLGEEV-GYS 175 VL + V P R A V ++V + D G + G Sbjct: 77 LAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKD 136 Query: 176 IRFENKTSNKTILKYMTDGMLLREA--MEDHDLSRYSCIILDEAHERTLA---TDILMGL 230 ++ E + N + T G LL+ + ++LDEA +R L D + + Sbjct: 137 LKHEAERINNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEA-DRILDMGFADTMNAV 195 Query: 231 LKQVVKRRPDLKIIIMSAT 249 ++ + K+R L + SAT Sbjct: 196 IENLPKKRQTL---LFSAT 211 >2WWY-A nrPDB Length = 591 Score = 41.7 bits (96), Expect = 0.001, Method: Composition-based stats. Identities = 75/405 (18%), Positives = 145/405 (35%), Gaps = 79/405 (19%) Query: 52 GLQRHHTSAEEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRD---EFLKLYQN 108 G + S+ A ED P++G K DIL+ +L R E + + Sbjct: 9 GASNEYDSSPAAWNKEDF---PWSG-----KVKDILQNVFKL--EKFRPLQLETINVTMA 58 Query: 109 NQIMVFVGETGSGKTT--QIPQF------VLFDEMPHLENTQVACTQPRRVAAMSVAQRV 160 + + V TG GK+ Q+P ++ + L Q+ + ++A + Sbjct: 59 GKEVFLVMPTGGGKSLCYQLPALCSDGFTLVICPLISLMEDQLMVLKQLGISATMLNASS 118 Query: 161 AEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAH-- 218 ++E + E+ + E K T K M + + ++ R++ I +DE H Sbjct: 119 SKEHVKWVHAEM-VNKNSELKLIYVTPEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCC 177 Query: 219 ---ERTLATDI-LMGLLKQVVKRRPDLKIIIMSAT------LDAEKF---QRYFNDAPLL 265 D +G+LK ++ P+ +I ++AT DA+K ++ F Sbjct: 178 SQWGHDFRPDYKALGILK---RQFPNASLIGLTATATNHVLTDAQKILCIEKCFTFTASF 234 Query: 266 AVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISL 325 P Y E+ P D+++ I ++ ++G I F + E ++++ Sbjct: 235 NRPNLYY--EVRQKPSNTEDFIED-IVKLINGRYKGQSGIIYCFSQKDSE------QVTV 285 Query: 326 EGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTI 385 L G + +L P + + + +VV++T + Sbjct: 286 SLQNLGIHAGA-------YHANLEPEDKTTVHRKWSANEI-----QVVVATVAFGMGIDK 333 Query: 386 DGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGR 430 + +V+ SK S + Q +GRAGR Sbjct: 334 PDVRFVIHHSMSK------------------SMENYYQESGRAGR 360 >1BR4-A nrPDB Length = 820 Score = 40.9 bits (94), Expect = 0.002, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 15/90 (16%) Query: 71 INPFTGRE-FTPKYVDILK--IRRELPVH-------AQRDEFLKLYQNNQIMVFVGETGS 120 INP+ ++ K +D+ K R E+P H A R + +Q ++ GE+G+ Sbjct: 123 INPYKQLPIYSEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQD--REDQSILCTGESGA 180 Query: 121 GK---TTQIPQFVLFDEMPHLENTQVACTQ 147 GK T ++ Q++ H + TQ Sbjct: 181 GKTENTKKVIQYLAVVASSHKGKKDTSITQ 210 >6CZ5-A nrPDB Length = 480 Score = 40.5 bits (93), Expect = 0.002, Method: Composition-based stats. Identities = 56/384 (14%), Positives = 119/384 (30%), Gaps = 77/384 (20%) Query: 84 VDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDE--------- 134 +++ + R PV + + + + ++ +TG GKT +L Sbjct: 68 IELTRYTRPTPVQKHA---IPIIKEKRDLMACAQTGCGKTAAFLLPILSQIYSDGPGEAL 124 Query: 135 ---------MPHLENTQVACTQPRRVAAMSVAQ---RVAEEMDVKL-----GEEVGYSIR 177 + P R A+ + + + + V+ G ++G IR Sbjct: 125 RAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIR 184 Query: 178 FENKTSNKTILKYMTDGMLLREAMEDH-DLSRYSCIILDEAH---ERTLATDILMGLLKQ 233 L T G L+ L ++LDEA + I + + Sbjct: 185 ---DLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQD 241 Query: 234 VVKRRPDLKIIIMSATL--DAEKFQRYFNDAPLLAVPGRTYPVELYYTPE---FQRDYLD 288 + + ++ SAT + + R F D + GR T + + Sbjct: 242 TMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKR 301 Query: 289 SAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSL 348 S + +L AT + L+F+ + + + EG + ++G Sbjct: 302 SFLLDLLN--ATGKDSLTLVFVETKKGADSLEDFLYHEGY-----------ACTSIHGDR 348 Query: 349 PPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRV 408 ++ + ++++T +A L I + +V++ ++ + Sbjct: 349 SQRDREEALHQFRSGKSP-----ILVATAVAARGLDISNVKHVIN--------FDLPSDI 395 Query: 409 ESLLVSPISKASAQQRAGRAGRTR 432 E + R GR GR Sbjct: 396 EEYV----------HRIGRTGRVG 409 >3MKD-A nrPDB Length = 692 Score = 40.5 bits (93), Expect = 0.003, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 15/90 (16%) Query: 71 INPFTGRE-FTPKYVDILKIRRELPVH---------AQRDEFLKLYQNNQIMVFVGETGS 120 +NPF +T + VDI K RR V A R + NQ ++ GE+G+ Sbjct: 125 VNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDD--RQNQSLLITGESGA 182 Query: 121 GK---TTQIPQFVLFDEMPHLENTQVACTQ 147 GK T ++ Q++ + N Q Sbjct: 183 GKTENTKKVIQYLASVAGRNQANGSGVLEQ 212 >2JJ9-A nrPDB Length = 788 Score = 40.5 bits (93), Expect = 0.003, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 15/90 (16%) Query: 71 INPFTGRE-FTPKYVDILKIRRELPVH---------AQRDEFLKLYQNNQIMVFVGETGS 120 +NPF +T + VDI K RR V A R + NQ ++ GE+G+ Sbjct: 137 VNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDD--RQNQSLLITGESGA 194 Query: 121 GK---TTQIPQFVLFDEMPHLENTQVACTQ 147 GK T ++ Q++ + N Q Sbjct: 195 GKTENTKKVIQYLASVAGRNQANGSGVLEQ 224 >1QVA-A nrPDB Length = 223 Score = 40.5 bits (93), Expect = 0.003, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 65/165 (39%), Gaps = 7/165 (4%) Query: 94 PVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAA 153 P Q+ + + + + ++ ++G+GKT L ++ Q P R A Sbjct: 44 PSAIQQRAIMPIIEGHDVLA-QAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELA 102 Query: 154 MSVAQRV---AEEMDVKLGEEVGYSIRFENKTS-NKTILKYMTDGMLLREAMEDH-DLSR 208 + + + V A MD+K+ +G + E+ + T G + + Sbjct: 103 LQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGLRDAQIVVGTPGRVFDNIQRRRFRTDK 162 Query: 209 YSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAE 253 ILDEA E L++ + + P +++++SAT+ + Sbjct: 163 IKMFILDEADE-MLSSGFKEQIYQIFTLLPPTTQVVLLSATMPND 206 >3IUY-A nrPDB Length = 228 Score = 40.1 bits (92), Expect = 0.004, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 14/150 (9%) Query: 112 MVFVGETGSGKTTQ--IPQFVLFDEMPHLENTQ----VACTQPRRVAAMSVAQRVAEEMD 165 ++ V +TG+GKT +P F+ D P + + P R A+ V ++ Sbjct: 60 LIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGMLVLTPTRELALHVEAECSKYSY 119 Query: 166 VKLGEEVGYSIR-----FENKTSNKTILKYMTDGMLLREAMEDH-DLSRYSCIILDEAHE 219 L Y R E+ + I+ T G L M + +L + +++DEA + Sbjct: 120 KGLKSICIYGGRNRNGQIEDISKGVDII-IATPGRLNDLQMNNSVNLRSITYLVIDEA-D 177 Query: 220 RTLATDILMGLLKQVVKRRPDLKIIIMSAT 249 + L + + K ++ RPD + ++ SAT Sbjct: 178 KMLDMEFEPQIRKILLDVRPDRQTVMTSAT 207 >3JAX-A nrPDB Length = 974 Score = 39.7 bits (91), Expect = 0.004, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 15/90 (16%) Query: 71 INPFTGRE-FTPKYVDILK--IRRELPVH-------AQRDEFLKLYQNNQIMVFVGETGS 120 INP+ ++ K +D+ K R E+P H A R + +Q ++ GE+G+ Sbjct: 124 INPYKQLPIYSEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQD--REDQSILCTGESGA 181 Query: 121 GK---TTQIPQFVLFDEMPHLENTQVACTQ 147 GK T ++ Q++ H + TQ Sbjct: 182 GKTENTKKVIQYLAVVASSHKGKKDTSITQ 211 >5V9X-A nrPDB Length = 877 Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats. Identities = 67/398 (16%), Positives = 129/398 (32%), Gaps = 90/398 (22%) Query: 94 PVHAQRDEFLKLYQNNQIMVFVGETGSGKT----TQIPQFVLFDEMPHLENTQVACTQPR 149 P AQ D + + + TGSGKT + + TQV P Sbjct: 48 PTPAQADAW-SAISEGNNTLVIAPTGSGKTLAAFLWAIDRLADPAREPSQGTQVLYVSPL 106 Query: 150 RVAAMSVAQ----------RVAEEMDVKLGEEVGYSIRFENKTSNKTILKYM-------- 191 + A+ V + RVAE + + +R + N+ Sbjct: 107 KALAVDVERNLRTPLTGITRVAERHGL-PAPSITVGVRSGDTPPNQRRAMIANPPDVLIT 165 Query: 192 ---TDGMLLREAMEDHDLSRYSCIILDEAH-----ERTLATDILMGLLKQVVKRRPDLKI 243 + ++L A + L+ +I+DE H +R + + L Q++ P + Sbjct: 166 TPESLFLMLTSAARET-LTSVRTVIVDEVHAVAATKRGAHLALSLERLDQLLD-TPAQR- 222 Query: 244 IIMSATLDAEKFQRYF--NDAPLLAV---PGRTYPVELYYTPEFQRDYLDSAIRTVLQ-- 296 I +SAT+ + F AP V +T+ + + + +++I ++ Sbjct: 223 IGLSATVRPPEEVARFLSGQAPTTIVCPPAAKTFDLSVQVPVPDMANLDNNSIWPDVEER 282 Query: 297 -IHATEEAGDILLFLTGEDEIEDAVRKISLEGDQL------------------------V 331 + E ++F E +++ + Sbjct: 283 IVDLVEAHNSSIVFANSRRLAERLTSRLNEIHAERSGIELPAGPNPEVGGGAPAHLMGSG 342 Query: 332 REEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYV 391 + G PL +GS+ Q+ ++ E + V++T+ E + + + V Sbjct: 343 QANGAPPLLARAHHGSVSKEQRAQV-----EDDLKSGRLRAVVATSSLELGIDMGAVDLV 397 Query: 392 VDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAG 429 + + +P S AS QR GRAG Sbjct: 398 IQ------------------VEAPPSVASGLQRVGRAG 417 >6DUE-A nrPDB Length = 787 Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats. Identities = 26/156 (16%), Positives = 52/156 (33%), Gaps = 15/156 (9%) Query: 71 INPFTGREFTP-----KYVDILKIRRELP----VHAQRDEFLKLYQNNQIMVFVGETGSG 121 INPF T +Y D + + P + + L +Q ++ GE+G+G Sbjct: 139 INPFRDLGNTTLDWIVRYRDTFDLSKLAPHVFYTARRALDNLHAVNKSQTIIVSGESGAG 198 Query: 122 KTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENK 181 K T+ + ++ + Q +AA V + ++ + + Sbjct: 199 K-TEATKQIMRYFAAAKTGSMDLRIQNAIMAANPVLEAFGNAKTIRNNNSSRFGRFMQLD 257 Query: 182 TSNKTILKYMTDGMLL----REAMEDHDLSRYSCII 213 + +K+ + L R +D Y I Sbjct: 258 VGREGGIKFGSVVAFLLEKSRVLTQDEQERSY-HIF 292 >5ZBZ-A nrPDB Length = 220 Score = 39.0 bits (89), Expect = 0.008, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 64/168 (38%), Gaps = 11/168 (6%) Query: 94 PVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAA 153 P Q+ L + + + ++G+GKT +L L+ TQ P R A Sbjct: 37 PSAIQQRAILPCIKGYDV-IAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELA 95 Query: 154 MSVAQRVAEEMDVKLGEEV-----GYSIRFE--NKTSNKTILKYMTDGMLLREAMEDHDL 206 + Q+V + +G G ++R E + T G + + Sbjct: 96 QQI-QKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLS 154 Query: 207 SRY-SCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAE 253 +Y +LDEA E L+ + K + +++++SAT+ ++ Sbjct: 155 PKYIKMFVLDEADE-MLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSD 201 >4B3F-X nrPDB Length = 646 Score = 39.0 bits (89), Expect = 0.009, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 5/76 (6%) Query: 97 AQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSV 156 +Q++ L ++ + G G+GKTT + + +L + +V C P +A ++ Sbjct: 193 SQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAV---KQGLKVLCCAPSNIAVDNL 249 Query: 157 AQRVA--EEMDVKLGE 170 +R+A ++ ++LG Sbjct: 250 VERLALCKQRILRLGH 265 >2ZJ8-A nrPDB Length = 720 Score = 38.6 bits (88), Expect = 0.011, Method: Composition-based stats. Identities = 86/521 (16%), Positives = 171/521 (32%), Gaps = 72/521 (13%) Query: 77 REFTPKYVDILKIRRELPVHAQRDEFLKL-YQNNQIMVFVGETGSGKTTQIPQFVLFDEM 135 + LK R + + E LK + + T SGKT ++ + Sbjct: 6 LRVDERIKSTLKERGIESFYPPQAEALKSGILEGKNALISIPTASGKTLIAEIAMVHRIL 65 Query: 136 PHLENTQVACTQPRRVAAMSVAQRVAE--EMDVKLGEEVGYSIRFENKTSNKTILKYMTD 193 + + P + A Q + ++ +++ G + I+ + Sbjct: 66 --TQGGKAVYIVPLKALAEEKFQEFQDWEKIGLRVAMATGDYDSKDEWLGKYDIIIATAE 123 Query: 194 GM--LLREAMEDHDLSRYSCIILDEAH-----ERTLATDILMG-LLKQVVKRRPDLKIII 245 LLR + ++ DE H +R ++++ +L + II Sbjct: 124 KFDSLLRH--GSSWIKDVKILVADEIHLIGSRDRGATLEVILAHMLGKAQ-------IIG 174 Query: 246 MSATLDAEKFQRYFNDAPLLAVPGRTYPVEL--------YYTPEFQRDYLDSAIRTVLQI 297 +SAT+ + + +A L+ R PV+L + T E S+ ++ Sbjct: 175 LSATIGNPEELAEWLNAELIVSDWR--PVKLRRGVFYQGFVTWEDGSIDRFSSWEELVYD 232 Query: 298 HATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQ--R 355 ++ G L+F+ + E ++S + L+ + L+ P ++ + Sbjct: 233 AIRKKKGA-LIFVNMRRKAERVALELSKKVKSLLTKPEIRALNELADSLEENPTNEKLAK 291 Query: 356 IFEPAPESHNGRPGR--KVVISTN----IAETSLTIDGIVYVVDPGFSKQKVYNPRIRVE 409 H+ GR +V++ N I + + + ++ + + + R Sbjct: 292 AIRGGVAFHHAGLGRDERVLVEENFRKGIIKAVVATPTLSAGINTPAFRVIIRDI-WRYS 350 Query: 410 SLLVSPISKASAQQRAGRAGRTR---------------P---------GKCFRLYTEEAF 445 + I Q GRAGR + P GK +L+++ + Sbjct: 351 DFGMERIPIIEVHQMLGRAGRPKYDEVGEGIIVSTSDDPREVMNHYIFGKPEKLFSQLSN 410 Query: 446 QKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRA-----LEELNY 500 + L Q I S TV E+ K + + D + E +R LE Sbjct: 411 ESNLRSQVLALIATFGYS-TVEEILKFISNTFYAYQRKDTYSLEEKIRNILYFLLENEFI 469 Query: 501 LACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQE 541 L+D+ LG ++ +DP A M E Sbjct: 470 EISLEDKIRPLSLGIRTAKLYIDPYTAKMFKDKMEEVVKDP 510 >3BER-A nrPDB Length = 249 Score = 37.8 bits (86), Expect = 0.016, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 75/214 (35%), Gaps = 19/214 (8%) Query: 50 FKGLQRHHTSAEEAQK-LEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQN 108 F+ ++ H + E +Q +E+ + F T + + E + L Sbjct: 20 FQSMEEHDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQ 79 Query: 109 NQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKL 168 + ++ + ETGSGKT +L + + P R A ++++ L Sbjct: 80 GRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQF-----EAL 134 Query: 169 GEEVGYS----------IRFENKTSNKTILKYMTDGMLLREAMEDHD--LSRYSCIILDE 216 G +G + + K + T G L+ L +++DE Sbjct: 135 GSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDE 194 Query: 217 AHERTLATDILMGLLKQVVKRRPDLKIIIMSATL 250 A +R L D + K + D K + SAT+ Sbjct: 195 A-DRILNMDFETEVDKILKVIPRDRKTFLFSATM 227 >4W7S-A nrPDB Length = 463 Score = 37.8 bits (86), Expect = 0.018, Method: Composition-based stats. Identities = 68/410 (16%), Positives = 136/410 (33%), Gaps = 56/410 (13%) Query: 38 SEEPLVHHDAGEFKGLQRHHTSAEEAQKLEDGKINPFTGREFTPK---YVDILKIRRELP 94 +E+ L + +++ L+ + + +E+ N + P+ V I ++R P Sbjct: 14 TEKSLHEMNERDWRILKEDYAIVTKGGTVENPLRN-WEELNIIPRDLLRVIIQELRFPSP 72 Query: 95 VHAQRDEFLKL--YQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLE---------NTQV 143 QR + + + + V TGSGKT +L + Sbjct: 73 TPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGPKA 132 Query: 144 ACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTI------------LKYM 191 P R + Q+ +++ +E Y + + ++ + Sbjct: 133 LILAPTRELVQQI-QKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILVA 191 Query: 192 TDGMLLREAMEDHD-LSRYSCIILDEAHE------RTLATDILMGLLKQVVKRRPDLKII 244 T G L+ + + ++LDEA + T+IL + + + Sbjct: 192 TPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKV--DINADSAVNRQT 249 Query: 245 IM-SATLDA--EKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATE 301 +M +AT+ EK + P+ A G E + D L+ + Sbjct: 250 LMFTATMTPVIEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDKFKKLKPIVAK 309 Query: 302 EAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAP 361 I++F+ + + K E + V L+GS Q++ + Sbjct: 310 YDPPIIIFINYKQTADWLAEKFQKET----------NMKVTILHGSKSQEQREHSLQ--- 356 Query: 362 ESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQ-KVYNPRIRVES 410 +++I+TN+A L I + VV+ SK+ Y RI Sbjct: 357 --LFRTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTG 404 >5ZWN-y nrPDB Length = 588 Score = 37.4 bits (85), Expect = 0.021, Method: Composition-based stats. Identities = 73/428 (17%), Positives = 144/428 (33%), Gaps = 60/428 (14%) Query: 20 PEQAAEIAEELSKQHPLPSEEPLVHHDAGEFKGLQRHHTSAEEAQKLEDGKINPFTGREF 79 P+ AAE + + K +E+ L + +++ L+ + + +E+ N + Sbjct: 125 PKNAAE-SSYMGKHW---TEKSLHEMNERDWRILKEDYAIVTKGGTVENPLRN-WEELNI 179 Query: 80 TPK---YVDILKIRRELPVHAQRDEFLKL--YQNNQIMVFVGETGSGKTTQIPQFVLFDE 134 P+ V I ++R P QR + + + + V TGSGKT +L Sbjct: 180 IPRDLLRVIIQELRFPSPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKM 239 Query: 135 MPHLE---------NTQVACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNK 185 + P R + Q+ +++ +E Y + + Sbjct: 240 SRSPPRPPSLKIIDGPKALILAPTRELVQQI-QKETQKVTKIWSKESNYDCKVISIVGGH 298 Query: 186 TI------------LKYMTDGMLLREAMEDHD-LSRYSCIILDEAHE------RTLATDI 226 ++ + T G L+ + + ++LDEA + T+I Sbjct: 299 SLEEISFSLSEGCDILVATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNI 358 Query: 227 LMGLLKQVVKRRPDLKIIIM-SATLDA--EKFQRYFNDAPLLAVPGRTYPVELYYTPEFQ 283 L + + + +M +AT+ EK + P+ A G E + Sbjct: 359 LTKV--DINADSAVNRQTLMFTATMTPVIEKIAAGYMQKPVYATIGVETGSEPLIQQVVE 416 Query: 284 RDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYP 343 D L+ + I++F+ + + K E + V Sbjct: 417 YADNDEDKFKKLKPIVAKYDPPIIIFINYKQTADWLAEKFQKET----------NMKVTI 466 Query: 344 LYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQ-KVY 402 L+GS Q++ + +++I+TN+A L I + VV+ SK+ Y Sbjct: 467 LHGSKSQEQREHSLQ-----LFRTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDY 521 Query: 403 NPRIRVES 410 RI Sbjct: 522 IHRIGRTG 529 >5AGA-A nrPDB Length = 830 Score = 36.6 bits (83), Expect = 0.036, Method: Composition-based stats. Identities = 65/405 (16%), Positives = 135/405 (33%), Gaps = 76/405 (18%) Query: 91 RELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRR 150 +++ L + +V+ T +GKT +L + + P Sbjct: 26 KKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAELLILKRVL--EMRKKALFILPF- 82 Query: 151 VAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTI------LKYMT----DGMLLREA 200 +SVA+ + L +EVG + +++ + + T +G++ R Sbjct: 83 ---VSVAKEKKYYL-QSLFQEVGIKVDGYMGSTSPSRHFSSLDIAVCTIERANGLINR-L 137 Query: 201 MEDHDLSRYSCIILDEAH-----ERTLATDILMGLLKQVVKRRPD------------LKI 243 +E++ + +++DE H R ++L+ + + ++ ++I Sbjct: 138 IEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYITRKSASCQADLASSLSNAVQI 197 Query: 244 IIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQ-IHATEE 302 + MSATL + + +A L R PV L + + DS+++ V + + Sbjct: 198 VGMSATLPNLELVASWLNAELYHTDFR--PVPLLESVKVGNSIYDSSMKLVREFEPMLQV 255 Query: 303 AGD-----------------ILLFLTGEDEIEDAVRKISLEGDQLVRE-EGCGPLSVYPL 344 GD +LLF + E I+ E L + EG S P Sbjct: 256 KGDEDHVVSLCYETICDNHSVLLFCPSKKWCEKLADIIAREFYNLHHQAEGLVKPSECPP 315 Query: 345 YGSLPPHQQQRI--FEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSK---- 398 + + P + + V LT + +++ F + Sbjct: 316 VILEQKELLEVMDQLRRLPSGLDSVLQKTVPWGVAFHHAGLTFEERD-IIEGAFRQGLIR 374 Query: 399 ----QKVYNPRIRVESLLVS---------PISKASAQQRAGRAGR 430 + + + + V P+ + +Q GRAGR Sbjct: 375 VLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGR 419 >2GXQ-A nrPDB Length = 207 Score = 36.6 bits (83), Expect = 0.045, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 74/211 (35%), Gaps = 28/211 (13%) Query: 74 FTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFD 133 F P+ ++ L R + L L + ++ TG+GKT + Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAER 62 Query: 134 EMP---HLENTQVACTQPRRVAAMSVA----------QRVAEEMDVKLGEEVGYSIRFEN 180 P + P R A+ VA + VA G++ +R + Sbjct: 63 LAPSQERGRKPRALVLTPTRELALQVASELTAVAPHLKVVAVYGGTGYGKQKEALLRGAD 122 Query: 181 --KTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHER-TLATDILMGLLKQVVKR 237 + L Y+ G+L DLSR +LDEA E ++ + + L Sbjct: 123 AVVATPGRALDYLRQGVL--------DLSRVEVAVLDEADEMLSMGFEEEVEALLSATP- 173 Query: 238 RPDLKIIIMSATLD--AEKFQRYFNDAPLLA 266 P + ++ SATL A++ + P+L Sbjct: 174 -PSRQTLLFSATLPSWAKRLAERYMKNPVLI 203 >4CDG-A nrPDB Length = 673 Score = 36.3 bits (82), Expect = 0.051, Method: Composition-based stats. Identities = 52/393 (13%), Positives = 119/393 (30%), Gaps = 77/393 (19%) Query: 78 EFTPKYVDILKIRRELPVHAQRDEFLKLYQNN---QIMVFVGETGSGKTT--QIPQFVLF 132 T + + I ++ +H R L+ + + TG GK+ Q+P V Sbjct: 17 PHTKEMMKI--FHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACV-- 72 Query: 133 DEMPHLENTQVACTQPRRVAAMSVAQRV------AEEMDVKLGEEVGYSIRFE-NKTSNK 185 P R + Q++ A + + +I + +K Sbjct: 73 ------SPGVTVVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPI 126 Query: 186 TILKYMT------DGMLLREAMEDHDLSRYSCIILDEAH-----ERTLATDILMGLLKQV 234 L Y+T L+ ++ + ++DEAH D + + Sbjct: 127 IKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKR--MNML 184 Query: 235 VKRRPDLKIIIMSATLDAEKFQRYFNDAPL-----LAVPGRTYPVELYYTPEFQRDYLDS 289 ++ P + ++ ++AT + + + ++ + ++ Y P+ + Sbjct: 185 RQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFD 244 Query: 290 AIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLP 349 + + + H +++ E + + +G L+ + L Sbjct: 245 CLEWIRKHH---PYDSGIIYCLSRRECDTMADTLQRDG-----------LAALAYHAGLS 290 Query: 350 PHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVE 409 + + + + G +V+ +T + + +V+ K Sbjct: 291 DSARDEV----QQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPK----------- 335 Query: 410 SLLVSPISKASAQQRAGRAGRTRP-GKCFRLYT 441 S Q +GRAGR C YT Sbjct: 336 -------SVEGYYQESGRAGRDGEISHCLLFYT 361 >4NHO-A nrPDB Length = 488 Score = 36.3 bits (82), Expect = 0.053, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 149/445 (33%), Gaps = 95/445 (21%) Query: 71 INPFTGREFTPKYVDILKI---RRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKT---- 123 I + P ++++ + P+ Q + + N+ ++ V ETGSGKT Sbjct: 58 IRSWKDSSLPPHILEVIDKCGYKEPTPIQRQA---IPIGLQNRDIIGVAETGSGKTAAFL 114 Query: 124 -------TQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQ-----------RVAEEMD 165 T +P+ +E P R A + + R + Sbjct: 115 IPLLVWITTLPKIDRIEESDQGPYA--IILAPTRELAQQIEEETIKFGKPLGIRTVAVIG 172 Query: 166 VKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD-LSRYSCIILDEAHERTLAT 224 E+ G+ +R + T G L+ + LSR + ++LDEA +R + Sbjct: 173 GISREDQGFRLRMG------CEIVIATPGRLIDVLENRYLVLSRCTYVVLDEA-DRMID- 224 Query: 225 DILMGLLKQVVKRRPDLKIIIMSA-TLDAEKFQRYFND--------APLLAVPGRTYPVE 275 MG V K + + T +AE ++ + + P Sbjct: 225 ---MGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAV 281 Query: 276 LYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQ------ 329 + R I + + H E +FL E E + I +G Sbjct: 282 ERLARSYLRRPAVVYIGSAGKPHERVEQK---VFLMSESEKRKKLLAILEQGFDPPIIIF 338 Query: 330 LVREEGCGPLS---------VYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAE 380 + +++GC L+ L+G Q++ + + ++++T++A Sbjct: 339 VNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALS-----NLKAGAKDILVATDVAG 393 Query: 381 TSLTIDGIVYVVDPGFSKQ-KVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRL 439 + I + VV+ +K + Y RI R GRAG++ F Sbjct: 394 RGIDIQDVSMVVNYDMAKNIEDYIHRIG----------------RTGRAGKSGVAITFLT 437 Query: 440 YTEEAFQKELIEQSYPEILRSNLSS 464 + A EL + IL S +SS Sbjct: 438 KEDSAVFYELKQ----AILESPVSS 458 >3BOR-A nrPDB Length = 237 Score = 35.9 bits (81), Expect = 0.062, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 67/171 (39%), Gaps = 17/171 (9%) Query: 94 PVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAA 153 P Q+ + + + + ++G+GKT +L + TQ P R A Sbjct: 53 PSAIQQRAIIPCIKGYDV-IAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELA 111 Query: 154 MSVAQRVAEEMDVKLGEEV-----GYSIRFENKT--SNKTILKYMTDG----MLLREAME 202 + Q+V + +G G ++R E + + + T G ML R + Sbjct: 112 QQI-QKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLS 170 Query: 203 DHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAE 253 + + +LDEA E L+ + + K ++++++SAT+ + Sbjct: 171 PKWIKMF---VLDEADE-MLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTD 217 >5L3S-B nrPDB Length = 296 Score = 35.5 bits (80), Expect = 0.083, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 89/221 (40%), Gaps = 40/221 (18%) Query: 59 SAEEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQ-------- 110 S E +K+ + N G++ + + + E+ ++ + ++ NQ Sbjct: 40 SYEVTEKILEDLKNNLIGKKVSRR-----EEVEEIVINTLKKSITEILTKNQKTDLIEKI 94 Query: 111 --------IMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAE 162 +++F G G GKTT I + V+ + +T +A + R AA A Sbjct: 95 RSSGKKPFVIIFFGVNGVGKTTTIAK-VVNMLKKNNLSTIIAASDTFRAAAQEQLAYHAS 153 Query: 163 EMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTL 222 +++V+L IR + ++ +A+ +++D A + Sbjct: 154 KLEVQL-------IRGKYGADPASVAF---------DAISFAKSRNIDVVLIDTAGRMHI 197 Query: 223 ATDILMGLLKQVVKRRPDLKIIIMS--ATLDAEKFQRYFND 261 +D++ L K + +PD +I+I+ A DA + R+F + Sbjct: 198 DSDLVEELKKVLRIAKPDFRILILDSLAGSDALEQARHFEN 238 >1WP9-A nrPDB Length = 494 Score = 35.5 bits (80), Expect = 0.091, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 59/167 (35%), Gaps = 29/167 (17%) Query: 282 FQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSV 341 + D L IR LQ ++ I++F + + V ++ +G + R G Sbjct: 343 PKMDKLKEIIREQLQ---RKQNSKIIVFTNYRETAKKIVNELVKDGIKAKRFVGQASKEN 399 Query: 342 YPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKV 401 L +Q+ I + V+++T++ E L + + VV Sbjct: 400 ---DRGLSQREQKLILDEFARGEFN-----VLVATSVGEEGLDVPEVDLVV--------F 443 Query: 402 YNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKE 448 Y P P + S QR GR GR PG+ L + + Sbjct: 444 YEP---------VPSAIRSI-QRRGRTGRHMPGRVIILMAKGTRDEA 480 Score = 34.7 bits (78), Expect = 0.14, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 69/189 (36%), Gaps = 10/189 (5%) Query: 90 RRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPR 149 RR+L E + + V TG GKT + ++ + +V P Sbjct: 4 RRDLIQPRIYQEVIYAKCKETNCLIVLPTGLGKT--LIAMMIAEYRLTKYGGKVLMLAPT 61 Query: 150 RVAAMSVAQRVAEEMDVKLGEEVGY----SIRFENKTSNKTILKYMTDGMLLREAMEDH- 204 + + A+ ++ + V S +K + + T + + + Sbjct: 62 KPLVLQHAESFRRLFNLPPEKIVALTGEKSPEERSKAWARAKVIVATPQTIENDLLAGRI 121 Query: 205 DLSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDA--EKFQRYFNDA 262 L S I+ DEAH R + + + ++ ++ + +I ++A+ + EK N+ Sbjct: 122 SLEDVSLIVFDEAH-RAVGNYAYVFIAREYKRQAKNPLVIGLTASPGSTPEKIMEVINNL 180 Query: 263 PLLAVPGRT 271 + + R+ Sbjct: 181 GIEHIEYRS 189 >1Q0U-A nrPDB Length = 219 Score = 35.5 bits (80), Expect = 0.099, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 77/225 (34%), Gaps = 55/225 (24%) Query: 74 FTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFD 133 FT F P ++ +K R ++ + + MV +TG+GKT ++ Sbjct: 6 FTRFPFQPFIIEAIKTLRFYKPTEIQERIIPGALRGESMVGQSQTGTGKTHAYLLPIMEK 65 Query: 134 EMPHLENTQVACTQPRRVAAMSVA---------------------------QRVAEEMDV 166 P Q T P R A + Q+ E+++V Sbjct: 66 IKPERAEVQAVITAPTRELATQIYHETLKITKFCPKDRMIVARCLIGGTDKQKALEKLNV 125 Query: 167 KLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDI 226 + +G R + +RE D + +++DEA L D Sbjct: 126 QPHIVIGTPGRIND---------------FIREQALDVHTAHI--LVVDEA---DLMLD- 164 Query: 227 LMGLLKQV----VKRRPDLKIIIMSATLDA--EKFQRYFNDAPLL 265 MG + V + DL++++ SAT+ + F + + + P Sbjct: 165 -MGFITDVDQIAARMPKDLQMLVFSATIPEKLKPFLKKYMENPTF 208 >2HYI-C nrPDB Length = 413 Score = 35.1 bits (79), Expect = 0.10, Method: Composition-based stats. Identities = 62/345 (17%), Positives = 118/345 (34%), Gaps = 48/345 (13%) Query: 97 AQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSV 156 A + +K + ++ ++G+GKT VL + TQ P R A+ + Sbjct: 63 AIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQI 122 Query: 157 AQRV--------AEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSR 208 + + + G VG IR K + T G + +R Sbjct: 123 QKGLLALGDYMNVQCHACIGGTNVGEDIR---KLDYGQHVVAGTPGRVFDMIRRRSLRTR 179 Query: 209 -YSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAV 267 ++LDEA E L + P +++++SATL E + + Sbjct: 180 AIKMLVLDEADE-MLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILE--------MTN 230 Query: 268 PGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVR--KISL 325 T P+ + + L+ + + + E D L L I AV Sbjct: 231 KFMTDPIRILVKRDELT--LEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKR 288 Query: 326 EGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTI 385 + D L + +V ++G +P +++ I + +V+IST++ L + Sbjct: 289 KVDWLTEKMREANFTVSSMHGDMPQKERESIMK-----EFRSGASRVLISTDVWARGLDV 343 Query: 386 DGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGR 430 + +++ Y+ E + R GR+GR Sbjct: 344 PQVSLIIN--------YDLPNNRELYI----------HRIGRSGR 370 >6F4A-B nrPDB Length = 644 Score = 35.1 bits (79), Expect = 0.11, Method: Composition-based stats. Identities = 61/330 (18%), Positives = 120/330 (36%), Gaps = 68/330 (20%) Query: 111 IMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEM---DVK 167 I++ VG T SGKT + Q + + + P R+ A V ++ E ++ Sbjct: 161 IIMHVGPTNSGKTFRSLQKLKAADRGYYAG-------PLRLLAREVYEKFKHENVRCNLL 213 Query: 168 LGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDIL 227 GEEV I+ ++ N+ L T M+ + ++LDE Sbjct: 214 TGEEV---IKDLDEMGNEANLTSGTIEMI-------PLNQNFDVVVLDEIQ--------- 254 Query: 228 MGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQRDYL 287 ++ + + + L K + +P VE+ +Y Sbjct: 255 --MMADLDRGW------AWTNALLGAKAKEVHCCGEASTIPLIKKIVEMTGDKLTINEYE 306 Query: 288 DSAIRTVLQIHATE-----EAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVY 342 V + T+ + GD ++ + + A+ + LE ++ L Sbjct: 307 RMGKLVVEEEALTKGYHSLKKGDCVVAFS-----KKAILDLKLEIEKKT------ELKAA 355 Query: 343 PLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVY 402 +YGSLPP + + + ++I+++ L + I VV F+ K + Sbjct: 356 VIYGSLPPETRVK-----QANLFNSGEFDILIASDAIGMGLNL-SIDRVV---FTTSKKF 406 Query: 403 NPRIRVESLLVSPISKASAQQRAGRAGRTR 432 + R V+ ++ ++ +Q GRAGR + Sbjct: 407 DGRDMVD------MTSSAIKQIGGRAGRFK 430 >2Z0M-A nrPDB Length = 337 Score = 35.1 bits (79), Expect = 0.12, Method: Composition-based stats. Identities = 67/367 (18%), Positives = 128/367 (34%), Gaps = 69/367 (18%) Query: 97 AQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSV 156 + + + L + +V +TGSGKT +L M + P R V Sbjct: 19 EVQSKTIPLMLQGKNVVVRAKTGSGKTAAYAIPILELGM------KSLVVTPTRELTRQV 72 Query: 157 AQRVAE---EMDVKLGEEV-GYSIRFENKTSNKTILKYMTDGMLLR-EAMEDHDLSRYSC 211 A + + MD K+ E G + + + T G LL + DLS + Sbjct: 73 ASHIRDIGRYMDTKVAEVYGGMPYKAQINRVRNADIVVATPGRLLDLWSKGVIDLSSFEI 132 Query: 212 IILDEAHERTLATDILMGL-----LKQVVKRRPDLKII-IMSATLDAE---KFQRYFNDA 262 +I+DEA D++ + +K ++ + + KI + SAT+ E + + + Sbjct: 133 VIIDEA-------DLMFEMGFIDDIKIILAQTSNRKITGLFSATIPEEIRKVVKDFITNY 185 Query: 263 PLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRK 322 + VE + ++ R+ +Q + +++F+ + + VR Sbjct: 186 EEIEACIGLANVEHKFV------HVKDDWRSKVQALRENKDKGVIVFVRTRNRVAKLVRL 239 Query: 323 ISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETS 382 + L G LP + R + E ++I+T++A Sbjct: 240 FDNAIE---------------LRGDLPQSVRNRNIDAFREGEYD-----MLITTDVASRG 279 Query: 383 LTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTE 442 L I + V++ + R + + R GR GR F + E Sbjct: 280 LDIPLVEKVINF----DAPQDLRTYIHRIG-----------RTGRMGRKGEAITF-ILNE 323 Query: 443 EAFQKEL 449 +KE+ Sbjct: 324 YWLEKEV 330 >2PX0-A nrPDB Length = 296 Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 24/145 (16%) Query: 112 MVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEE 171 +V G TG+GKTT + + + + T R+AA+ + AE + Sbjct: 108 IVLFGSTGAGKTTTLAKLAAISMLEKHKKIAFITTDTYRIAAVEQLKTYAELL------- 160 Query: 172 VGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAHERTLATDILMGLL 231 + L+ ++A E S Y + +D A R + L Sbjct: 161 -------------QAPLEVCYTKEEFQQAKE--LFSEYDHVFVDTA-GRNFKDPQYIDEL 204 Query: 232 KQVVKRRPDLK-IIIMSATLDAEKF 255 K+ + ++ +++SAT E Sbjct: 205 KETIPFESSIQSFLVLSATAKYEDM 229 >6IC4-I nrPDB Length = 233 Score = 34.3 bits (77), Expect = 0.19, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 78/219 (35%), Gaps = 36/219 (16%) Query: 100 DEFLKLYQNNQIMVFVGETGSGKTTQIPQ---FVLFDEMPHLENTQVACTQPRRVAAMS- 155 D + QI +G +G+GKTT + ++ D+ L + + R+ A M Sbjct: 18 DNISLNIRRGQITAIMGPSGTGKTTLLRLIGGQLVPDQGEVLLDGKDIAQMSRQRARMGM 77 Query: 156 VAQRVAEEMDVKLGEEVGYSIRF----ENKTSNKTILKYMTDGM---------------- 195 + Q A D+ + E V + IR EN + LK + G+ Sbjct: 78 LFQSGALFTDMSVYENVAFPIRAHTLSENLIAELVALKLESVGLRGTEQLMPTELSGGMN 137 Query: 196 ----LLREAMEDHDLSRYSCIILDE--AHERTLATDILMGLLKQVVKRRPDLKIIIMSAT 249 L R D DL I+ DE A + + +L L++ + + II+ Sbjct: 138 RRVALARAIALDPDL-----IMYDEPFAGQDPIVKGVLTRLIRSLREALDLTTIIVSHDV 192 Query: 250 LDAEKFQRYFNDAPLLAVPGRTYPVELY-YTPEFQRDYL 287 + Y + G P EL Y F + +L Sbjct: 193 PETLSIADYIYVVAEGKIQGEGTPEELQAYASPFVKQFL 231 >3RC8-A nrPDB Length = 677 Score = 34.0 bits (76), Expect = 0.26, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 70/168 (41%), Gaps = 15/168 (8%) Query: 324 SLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSL 383 + + R+ L +YGSLPP + A + ++ K++++T+ L Sbjct: 330 KNDIYSVSRQIEIRGLESAVIYGSLPPGTKLA---QAKKFNDPNDPCKILVATDAIGMGL 386 Query: 384 TIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAG----RTRPGKCFRL 439 + I ++ K + R + PI+ + A Q AGRAG R + G+ + Sbjct: 387 NL-SIRRIIFYSLIKPSINEKGER----ELEPITTSQALQIAGRAGRFSSRFKEGEVTTM 441 Query: 440 YTEE-AFQKELIEQSYPEILRSNLSSTV--LELKKLGIDDLVHFDFMD 484 E+ + KE++++ I + L T +E+ + D + +D Sbjct: 442 NHEDLSLLKEILKRPVDPIRAAGLHPTAEQIEMFAYHLPDATLSNLID 489 >5W1A-A nrPDB Length = 810 Score = 33.2 bits (74), Expect = 0.40, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 8/79 (10%) Query: 71 INPFTGRE-FTPKYVDIL--KIRRELPVHAQR---DEFLKLYQN--NQIMVFVGETGSGK 122 INP+ +T + + K R E+P H ++ + N NQ M+ GE+G+GK Sbjct: 126 INPYKRYPVYTNRCAKMYRGKRRNEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGK 185 Query: 123 TTQIPQFVLFDEMPHLENT 141 T + + + Sbjct: 186 TENTKKVIAYFATVGASKK 204 >3DKP-A nrPDB Length = 245 Score = 33.2 bits (74), Expect = 0.41, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 58/148 (39%), Gaps = 23/148 (15%) Query: 85 DILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTT--QIPQFVLFDEMPHLENTQ 142 +IL ++P Q + + ++ TGSGKT IP ++ + P + + Sbjct: 43 NILDAGFQMPTPIQMQAIPVMLHGRE-LLASAPTGSGKTLAFSIP-ILMQLKQPANKGFR 100 Query: 143 VACTQPRRVAAMSVAQRVAEEMDVKLGEEVGYSI-----------RFENKTSNKTILKYM 191 P R A + + + +K+ E G+ I +F K+S K + Sbjct: 101 ALIISPTRELASQIHREL-----IKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVT 155 Query: 192 TDGMLLREAMEDH---DLSRYSCIILDE 216 T L+ +D DL+ +++DE Sbjct: 156 TPNRLIYLLKQDPPGIDLASVEWLVVDE 183 >5H53-A nrPDB Length = 845 Score = 33.2 bits (74), Expect = 0.45, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 8/70 (11%) Query: 71 INPFTGRE-FTPKYVDIL--KIRRELPVHAQ-----RDEFLKLYQNNQIMVFVGETGSGK 122 +NP+ + P+ V K R+E P H +F+ ++NQ ++ GE+G+GK Sbjct: 126 VNPYKWLPVYNPEVVTAYRGKKRQEAPPHIFSISDNAYQFMLTDRDNQSILITGESGAGK 185 Query: 123 TTQIPQFVLF 132 T + + + Sbjct: 186 TVNTKRVIQY 195 >3FTQ-A nrPDB Length = 274 Score = 32.8 bits (73), Expect = 0.58, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 86/223 (38%), Gaps = 23/223 (10%) Query: 112 MVFVGETGSGKTTQIPQFVLFDEMPH----LENTQVACTQPRRVAAMSVAQRVAEEMDVK 167 ++ VGE+G GK+T I L D P ++ T + + + +R ++ + Sbjct: 8 LMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEER-GVKLRLT 66 Query: 168 LGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAH--------E 219 + + GY + KTI+ Y+ D R ++ L+R II + H Sbjct: 67 VVDTPGYGDAINCRDCFKTIISYI-DEQFERYLHDESGLNR-RHIIDNRVHCCFYFISPF 124 Query: 220 RTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYT 279 + + +K + + + +I + TL ++ +R + + +++Y+ Sbjct: 125 GHGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKERERLKKR---ILDEIEEHSIKIYHL 181 Query: 280 PEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRK 322 P+ + D + + I + G +++ +A K Sbjct: 182 PDAESDEDED-----FKEQTRLLKASIPFSVVGSNQLIEAKGK 219 >2MYS-A nrPDB Length = 843 Score = 32.8 bits (73), Expect = 0.60, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 8/70 (11%) Query: 71 INPFTGRE-FTPKYVDIL--KIRRELPVHAQ-----RDEFLKLYQNNQIMVFVGETGSGK 122 +NP+ + PK V K R+E P H +F+ + NQ ++ GE+G+GK Sbjct: 126 VNPYKWLPVYNPKVVLAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGK 185 Query: 123 TTQIPQFVLF 132 T + + + Sbjct: 186 TVNTKRVIQY 195 >2OUK-A nrPDB Length = 263 Score = 32.4 bits (72), Expect = 0.72, Method: Composition-based stats. Identities = 8/48 (16%), Positives = 23/48 (47%) Query: 79 FTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQI 126 + +D+ ++++ + +++V +G +GSGK+T + Sbjct: 20 HMLQMIDVHQLKKSFGSLEVLKGINVHIREGEVVVVIGPSGSGKSTFL 67 >5I4E-A nrPDB Length = 980 Score = 32.0 bits (71), Expect = 0.88, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 15/84 (17%) Query: 71 INPFTGRE-FTPKYVDIL--KIRRELPVH-------AQRDEFLKLYQNNQIMVFVGETGS 120 INP+ +T V++ K R E+P H A R + +Q ++ GE+G+ Sbjct: 99 INPYKQLPIYTEAIVEMYRGKKRHEVPPHVYAVTEGAYRSMLQD--REDQSILCTGESGA 156 Query: 121 GK---TTQIPQFVLFDEMPHLENT 141 GK T ++ Q++ Sbjct: 157 GKTENTKKVIQYLAHVASSPKGRK 180 >5FHF-A nrPDB Length = 433 Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 79/198 (39%), Gaps = 29/198 (14%) Query: 100 DEFLKLYQNNQIMVFV-GETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQ 158 + + L Q+++ VFV G+ GSGKTT + ++++ P +AA++ Sbjct: 11 QKIMNLIQDDENNVFVTGKAGSGKTTFL-KYLIE-----KSGKNCIVAAPTGIAAINAGG 64 Query: 159 -RVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEA 217 + + G Y R ENK S Y + +L E + ++S ILD Sbjct: 65 VTLHSLFGIPFGPITPYD-RLENKFSE-----YKVELLLKMELLIIDEISMVRPDILDTI 118 Query: 218 HERTL----ATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQR-----YFNDAPLLAVP 268 +R L +D G + QVV ++ ++ + E +F +A + Sbjct: 119 -DRKLRWVYESDEPFGGV-QVVMFGDLFQLPPVTKKQEREILSDFYDGFFFFNALVFKRT 176 Query: 269 GRTYPVE---LYYTPEFQ 283 G + VE ++ E + Sbjct: 177 GF-HIVELTKIFRQTEPE 193 >2QAG-A nrPDB Length = 361 Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 86/223 (38%), Gaps = 23/223 (10%) Query: 112 MVFVGETGSGKTTQIPQFVLFDEMPH----LENTQVACTQPRRVAAMSVAQRVAEEMDVK 167 ++ VGE+G GK+T I L D P ++ T + + + +R ++ + Sbjct: 40 LMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEER-GVKLRLT 98 Query: 168 LGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAH--------E 219 + + GY + KTI+ Y+ D R ++ L+R II + H Sbjct: 99 VVDTPGYGDAINCRDCFKTIISYI-DEQFERYLHDESGLNR-RHIIDNRVHCCFYFISPF 156 Query: 220 RTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYT 279 + + +K + + + +I + TL ++ +R + + +++Y+ Sbjct: 157 GHGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKERERLKKR---ILDEIEEHNIKIYHL 213 Query: 280 PEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRK 322 P+ + D + + I + G +++ +A K Sbjct: 214 PDAESDEDED-----FKEQTRLLKASIPFSVVGSNQLIEAKGK 251 >5V7X-A nrPDB Length = 752 Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 8/61 (13%) Query: 71 INPFTGRE-FTPKYVDILKIR---RELP-VHAQRDEFLKLY---QNNQIMVFVGETGSGK 122 +NP+ ++P+ V+ + R P + A DE + +Q ++ GE+G+GK Sbjct: 55 VNPYRSLPIYSPEKVEDYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGK 114 Query: 123 T 123 T Sbjct: 115 T 115 >4Q4L-A nrPDB Length = 485 Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 54/154 (35%), Gaps = 22/154 (14%) Query: 281 EFQRDYLDSAIRTV-LQIHATEEAGDILLF--------LTGEDEIEDAVRKISLEGDQ-- 329 E + L A+ + + H +E D+L F L G + R S G Q Sbjct: 236 EPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPT 295 Query: 330 LVREEGCGPLSVYPLYGSLPPHQQQR------IFEPAPESHNGRPGRKVVISTNIAETSL 383 L E G + Q + +P+P + G VV+S +IA + Sbjct: 296 LAEEMGKLQERITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGI 355 Query: 384 -----TIDGIVYVVDPGFSKQKVYNPRIRVESLL 412 +D +DP ++ Y+ RV+ L Sbjct: 356 YPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTL 389 >4C7O-A nrPDB Length = 298 Score = 31.6 bits (70), Expect = 1.2, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 47/110 (42%), Gaps = 4/110 (3%) Query: 65 KLEDGKINPFTGREFTP--KYVDILKIRRELPVHAQRDEFLKLYQNNQ-IMVFVGETGSG 121 ++++ + + TP ++V I++ + + ++ L L +++ G G+G Sbjct: 54 RVKEKAVGHEVNKSLTPGQEFVKIVR-NELVAAMGEENQTLNLAAQPPAVVLMAGLQGAG 112 Query: 122 KTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEE 171 KTT + + F H + V R AA+ + +AE++ V Sbjct: 113 KTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPS 162 >6AIC-A nrPDB Length = 214 Score = 31.6 bits (70), Expect = 1.2, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 40/102 (39%), Gaps = 14/102 (13%) Query: 307 LLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNG 366 L+ + ++ + R +G ++V+ G +P +Q + + P+ G Sbjct: 73 LILAPTRELAMQVAEQLR----EFSRGQGVQVVTVF---GGMPIERQIKALKKGPQIVVG 125 Query: 367 RPGRKV------VISTNIAETSLTIDGIVYVVDPGFSKQKVY 402 PGR + + T+ T L +D +++ GF + Sbjct: 126 TPGRVIDHLNRRTLKTDGIHT-LILDEADEMMNMGFIDDMRF 166 >3JCR-F nrPDB Length = 820 Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats. Identities = 81/445 (18%), Positives = 147/445 (33%), Gaps = 95/445 (21%) Query: 71 INPFTGREFTPKYVDILKI---RRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKT---- 123 I + P ++++ + P+ Q + + N+ ++ V ETGSGKT Sbjct: 390 IRSWKDSSLPPHILEVIDKCGYKEPTPIQRQA---IPIGLQNRDIIGVAETGSGKTAAFL 446 Query: 124 -------TQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQ-----------RVAEEMD 165 T +P+ +E P R A + + R + Sbjct: 447 IPLLVWITTLPKIDRIEESDQGPYA--IILAPTRELAQQIEEETIKFGKPLGIRTVAVIG 504 Query: 166 VKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD-LSRYSCIILDEAHERTLAT 224 E+ G+ +R + T G L+ + LSR + ++LDEA Sbjct: 505 GISREDQGFRLRMG------CEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRM---- 554 Query: 225 DILMGLLKQVVKRRPDLKIIIMSA-TLDAEKFQRYFND--------APLLAVPGRTYPVE 275 I MG V K + + T +AE ++ + + P Sbjct: 555 -IDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAV 613 Query: 276 LYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQ------ 329 + R I + + H E +FL E E + I +G Sbjct: 614 ERLARSYLRRPAVVYIGSAGKPHERVEQK---VFLMSESEKRKKLLAILEQGFDPPIIIF 670 Query: 330 LVREEGCGPLS---------VYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAE 380 + +++GC L+ L+G Q++ + + ++++T++A Sbjct: 671 VNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALS-----NLKAGAKDILVATDVAG 725 Query: 381 TSLTIDGIVYVVDPGFSKQ-KVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRL 439 + I + VV+ +K + Y RI R GRAG++ F Sbjct: 726 RGIDIQDVSMVVNYDMAKNIEDYIHRIG----------------RTGRAGKSGVAITFLT 769 Query: 440 YTEEAFQKELIEQSYPEILRSNLSS 464 + A EL + IL S +SS Sbjct: 770 KEDSAVFYELKQ----AILESPVSS 790 >5GAD-i nrPDB Length = 450 Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 47/110 (42%), Gaps = 4/110 (3%) Query: 65 KLEDGKINPFTGREFTP--KYVDILKIRRELPVHAQRDEFLKLYQNNQ-IMVFVGETGSG 121 ++++ + + TP ++V I++ + + ++ L L +++ G G+G Sbjct: 51 RVKEKAVGHEVNKSLTPGQEFVKIVR-NELVAAMGEENQTLNLAAQPPAVVLMAGLQGAG 109 Query: 122 KTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEE 171 KTT + + F H + V R AA+ + +AE++ V Sbjct: 110 KTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPS 159 >5GAF-i nrPDB Length = 398 Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 47/110 (42%), Gaps = 4/110 (3%) Query: 65 KLEDGKINPFTGREFTP--KYVDILKIRRELPVHAQRDEFLKLYQNNQ-IMVFVGETGSG 121 ++++ + + TP ++V I++ + + ++ L L +++ G G+G Sbjct: 54 RVKEKAVGHEVNKSLTPGQEFVKIVR-NELVAAMGEENQTLNLAAQPPAVVLMAGLQGAG 112 Query: 122 KTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEE 171 KTT + + F H + V R AA+ + +AE++ V Sbjct: 113 KTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPS 162 >6N9A-E nrPDB Length = 162 Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 58/146 (39%), Gaps = 12/146 (8%) Query: 102 FLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQ--R 159 + + ++++ G G+GKTT + + + T M+V + Sbjct: 22 LTENLKGGEVVILSGNLGAGKTTFVKGMIRAIGLDEKMVKSPTFTL------MNVYPGLK 75 Query: 160 VAEEMDVKLGEEVGY-SIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEAH 218 +D+ ++ + S+ E+ ++ + + G L + + + I DE+H Sbjct: 76 TIYHLDLYRLQDTDFLSLDVEDILEDEDGIMVVEWGDLFDGFWPEDSI-KVKIEIADESH 134 Query: 219 ERT--LATDILMGLLKQVVKRRPDLK 242 L + + L++++ + R +L+ Sbjct: 135 RNVEILIPEEVNFLVEKIERYRKELQ 160 >2J28-9 nrPDB Length = 430 Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 47/110 (42%), Gaps = 4/110 (3%) Query: 65 KLEDGKINPFTGREFTP--KYVDILKIRRELPVHAQRDEFLKLYQNNQ-IMVFVGETGSG 121 ++++ + + TP ++V I++ + + ++ L L +++ G G+G Sbjct: 53 RVKEKAVGHEVNKSLTPGQEFVKIVR-NELVAAMGEENQTLNLAAQPPAVVLMAGLQGAG 111 Query: 122 KTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGEE 171 KTT + + F H + V R AA+ + +AE++ V Sbjct: 112 KTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPS 161 >6C2V-A nrPDB Length = 115 Score = 31.3 bits (69), Expect = 1.6, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 7/62 (11%) Query: 111 IMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGE 170 I+V VG +G+GKTT DE+ +V + R V A+RVAEE + + + Sbjct: 4 IVVIVGPSGAGKTT-------LDELARKAKEEVPDAEIRTVTTKEDAKRVAEEAERRNAD 56 Query: 171 EV 172 V Sbjct: 57 IV 58 Score = 28.9 bits (63), Expect = 8.2, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 19/86 (22%) Query: 61 EEAQKLEDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGS 120 + +++ D +I T +E + + + R N I+V VG +GS Sbjct: 24 KAKEEVPDAEIRTVTTKEDAKRVAEEAERR-----------------NADIVVIVGPSGS 66 Query: 121 GKTTQIPQFVLFDEMPHLENTQVACT 146 GK+T ++ + + T Sbjct: 67 GKSTLA--KIVKKIIARAGAKTIEVT 90 >5OVO-B nrPDB Length = 99 Score = 31.3 bits (69), Expect = 1.6, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%) Query: 379 AETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLV--SPISKASAQQRAGRAGRTRPGKC 436 A TSL I G+ GF +QK + P+++VE + A Q+A GR GK Sbjct: 19 ALTSLGIQGLTVSEVKGFGRQKGFLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKI 78 Query: 437 FRLYTEEAFQKELIEQSY 454 F L +A + E + Sbjct: 79 FVLDIAQAVRIRTGETNT 96 >2KBE-A nrPDB Length = 226 Score = 31.3 bits (69), Expect = 1.8, Method: Composition-based stats. Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 12/145 (8%) Query: 112 MVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMD--VKLG 169 M+ ++G+GKT +L P + Q C P R A + V +EM K+ Sbjct: 64 MIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLE-VVQEMGKFTKIT 122 Query: 170 EEVGYSIRFENKTSNKTILKYMTDGMLL----REAMEDHDLSRYSCIILDEAHERTLATD 225 ++ FE + T G +L R+ M L + +LDEA + L Sbjct: 123 SQLIVPDSFEKNKQINAQVIVGTPGTVLDLMRRKLM---QLQKIKIFVLDEA-DNMLDQQ 178 Query: 226 ILMGLLKQVVKRRP-DLKIIIMSAT 249 L +V + P D ++++ SAT Sbjct: 179 GLGDQCIRVKRFLPKDTQLVLFSAT 203 >3I5H-A nrPDB Length = 839 Score = 30.9 bits (68), Expect = 2.1, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 8/61 (13%) Query: 71 INPFTGRE-FTPKYVDIL--KIRRELPVHAQ-----RDEFLKLYQNNQIMVFVGETGSGK 122 INP+ +T VD K R E+P H +++ + NQ M+ GE+G+GK Sbjct: 123 INPYRRLPIYTQGLVDKYRGKRRAEMPPHLFSIADNAYQYMLQDRENQSMLITGESGAGK 182 Query: 123 T 123 T Sbjct: 183 T 183 >4ON9-A nrPDB Length = 580 Score = 30.5 bits (67), Expect = 2.7, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 97/302 (32%), Gaps = 58/302 (19%) Query: 67 EDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQI 126 E N ++ F P+ + LP ++ + TG GK T + Sbjct: 18 EVSDTNLYS--PFKPRNYQLELA---LPAMKGKN-----------TIICAPTGCGK-TFV 60 Query: 127 PQFVLFD---EMPHLENTQVACT---QPRRVAAMSVAQRVAEEMDVK---LGEEVGYSIR 177 + + P + +V P SV + E + + ++ Sbjct: 61 SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVP 120 Query: 178 FENKTSNKTILKYMTDGMLLREAMED--HDLSRYSCIILDEAHERTLATDILMGLLKQVV 235 E N I+ +T +L+ + LS ++ +I DE H + M + + Sbjct: 121 VEQIVENNDII-ILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLD 179 Query: 236 KR-----RPDLKIIIMSATL---DAEKFQRYFN---------DAPLLAVPGRTYPVELY- 277 ++ P ++I ++A++ DA+ + DA ++A + +E Sbjct: 180 QKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT--VKHNLEELE 237 Query: 278 ---YTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREE 334 Y P+ ++S I + + D E + + + RE Sbjct: 238 QVVYKPQKFFRKVESRISDKFKYIIAQLMRD------TESLAKRICKDLENLSQIQNREF 291 Query: 335 GC 336 G Sbjct: 292 GT 293 >6QUZ-B nrPDB Length = 599 Score = 30.5 bits (67), Expect = 2.8, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 3/34 (8%) Query: 91 RELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTT 124 ++ PV + + Q + VG TGSGKTT Sbjct: 366 KKKPVLK---DITFHIKPGQKVALVGPTGSGKTT 396 >4Q7L-A nrPDB Length = 256 Score = 30.5 bits (67), Expect = 2.8, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 3/34 (8%) Query: 91 RELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTT 124 ++ PV + + Q + VG TGSGKTT Sbjct: 16 KKKPVLK---DITFHIKPGQKVALVGPTGSGKTT 46 >4A7F-C nrPDB Length = 697 Score = 30.5 bits (67), Expect = 2.9, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 11/79 (13%) Query: 67 EDGKINPFTGREFTPKY-VDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKT-- 123 ++ I + G +Y ++ L A R ++ Q NQ ++ GE+G+GKT Sbjct: 58 KESDIKAYNG-----RYKYEMPPHMYALANDAYRS--MRQSQENQCVIISGESGAGKTEA 110 Query: 124 -TQIPQFVLFDEMPHLENT 141 +I QF+ F N Sbjct: 111 SKKIMQFLTFVSSNQSPNG 129 >5XZ2-A nrPDB Length = 196 Score = 30.1 bits (66), Expect = 3.5, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 19/41 (46%) Query: 104 KLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVA 144 +N +I+ VG GSGK TQ + V HL + + Sbjct: 5 DKIKNAKIVFVVGGPGSGKGTQCEKIVAKYGYTHLSSGDLL 45 >4BPB-A nrPDB Length = 698 Score = 30.1 bits (66), Expect = 3.8, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 97/302 (32%), Gaps = 58/302 (19%) Query: 67 EDGKINPFTGREFTPKYVDILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQI 126 E N ++ F P+ + LP ++ + TG GK T + Sbjct: 2 EVSDTNLYS--PFKPRNYQLELA---LPAMKGKN-----------TIICAPTGCGK-TFV 44 Query: 127 PQFVLFD---EMPHLENTQVACT---QPRRVAAMSVAQRVAEEMDVK---LGEEVGYSIR 177 + + P + +V P SV + E + + ++ Sbjct: 45 SLLICEHHLKKFPQGQKGKVVFFANQIPVYEQNKSVFSKYFERHGYRVTGISGATAENVP 104 Query: 178 FENKTSNKTILKYMTDGMLLREAMED--HDLSRYSCIILDEAHERTLATDILMGLLKQVV 235 E N I+ +T +L+ + LS ++ +I DE H + M + + Sbjct: 105 VEQIVENNDII-ILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLD 163 Query: 236 KR-----RPDLKIIIMSATL---DAEKFQRYFN---------DAPLLAVPGRTYPVELY- 277 ++ P ++I ++A++ DA+ + DA ++A + +E Sbjct: 164 QKLGGSSGPLPQVIGLTASVGVGDAKTTDEALDYICKLCASLDASVIAT--VKHNLEELE 221 Query: 278 ---YTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREE 334 Y P+ ++S I + + D E + + + RE Sbjct: 222 QVVYKPQKFFRKVESRISDKFKYIIAQLMRD------TESLAKRICKDLENLSQIQNREF 275 Query: 335 GC 336 G Sbjct: 276 GT 277 >2GZA-A nrPDB Length = 361 Score = 30.1 bits (66), Expect = 3.9, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 98 QRDEFLKLYQNNQIMVFVGETGSGKTT 124 + Q +++V GETGSGKTT Sbjct: 164 YMSFLRRAVQLERVIVVAGETGSGKTT 190 >2V3C-C nrPDB Length = 432 Score = 30.1 bits (66), Expect = 4.3, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 69/170 (40%), Gaps = 28/170 (16%) Query: 107 QNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDV 166 + +++ VG GSGKTT + + + +P +AA + + A E Sbjct: 97 KKQNVILLVGIQGSGKTTTAAKLARYIQKRG--------LKPALIAADT-YRPAAYEQLK 147 Query: 167 KLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCIILDEA--HERTLAT 224 +L E++ I + ++T K+ + + +GM + +I+D A H+ Sbjct: 148 QLAEKIHVPI-YGDETRTKSPVDIVKEGM--------EKFKKADVLIIDTAGRHKEEKGL 198 Query: 225 DILMGLLKQVVKRRPDLKIIIMSAT------LDAEKFQRYFNDAPLLAVP 268 M +K++ PD I+++ T + A+ F+ + + V Sbjct: 199 LEEMKQIKEITN--PDEIILVIDGTIGQQAGIQAKAFKEAVGEIGSIIVT 246 >4BYF-A nrPDB Length = 725 Score = 29.7 bits (65), Expect = 4.3, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 16/92 (17%) Query: 71 INPFT-----GREFTPKYVDILKIRRELPVHAQRDEFLKLYQ---NNQIMVFVGETGSGK 122 +NP+ R+ +Y + + A D + + +Q ++ GE+G+GK Sbjct: 52 VNPYRDLQIYSRQHMERYRGVSFYEVPPHLFAVADTVYRALRTERRDQAVMISGESGAGK 111 Query: 123 TTQIPQFVLFDEMPHLENTQVACTQPRRVAAM 154 T+ + +L C P R A+ Sbjct: 112 -TEATKRLLQFYAET-------CPAPERGGAV 135 >5YCF-B nrPDB Length = 193 Score = 29.7 bits (65), Expect = 4.6, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 19/41 (46%) Query: 104 KLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVA 144 ++ +I+ VG GSGK TQ + V HL + + Sbjct: 3 DKIKDAKIIFVVGGPGSGKGTQCEKIVAKYGYTHLSSGDLL 43 >5L3S-A nrPDB Length = 298 Score = 29.7 bits (65), Expect = 4.7, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 9/66 (13%) Query: 111 IMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGE 170 I++ VG GSGKTT + F + + V A V + A + ++LG Sbjct: 104 IIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLV---------AADVYRPAAYDQLLQLGN 154 Query: 171 EVGYSI 176 ++G + Sbjct: 155 QIGVQV 160 >1QZX-A nrPDB Length = 440 Score = 29.7 bits (65), Expect = 4.7, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 9/66 (13%) Query: 111 IMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRVAEEMDVKLGE 170 I++ VG GSGKTT + F + + V A V + A + ++LG Sbjct: 106 IIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLV---------AADVYRPAAYDQLLQLGN 156 Query: 171 EVGYSI 176 ++G + Sbjct: 157 QIGVQV 162 >3CRV-A nrPDB Length = 551 Score = 29.7 bits (65), Expect = 4.8, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 16/27 (59%) Query: 97 AQRDEFLKLYQNNQIMVFVGETGSGKT 123 +D+ ++ +NN ++ TGSGKT Sbjct: 10 KLKDKVIEGLRNNFLVALNAPTGSGKT 36 >5FL3-A nrPDB Length = 368 Score = 29.7 bits (65), Expect = 5.0, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 1/44 (2%) Query: 105 LYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQP 148 + +++ G TGSGK+T + ++ H + P Sbjct: 129 AAKERGLILVTGPTGSGKSTTLA-ALIDHINLHYAKNIITIEDP 171 >4GL2-A nrPDB Length = 699 Score = 29.7 bits (65), Expect = 5.3, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 55/145 (37%), Gaps = 17/145 (11%) Query: 93 LPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLEN----TQVACTQP 148 L + + E + + ++ TG GK T++ ++ D + + +V Sbjct: 6 LQLRPYQMEVAQPALEGKNIIICLPTGCGK-TRVAVYIAKDHLDKKKKASEPGKVIVLVN 64 Query: 149 RRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYM----TDGMLLREAMEDH 204 + + + ++ + K +G S + K S ++K + +L ++ + Sbjct: 65 KVLLVEQLFRKEFQPFLKKWYRVIGLSGDTQLKISFPEVVKSCDIIISTAQILENSLLNL 124 Query: 205 D--------LSRYSCIILDEAHERT 221 + LS +S II+DE H Sbjct: 125 ENGEDAGVQLSDFSLIIIDECHHTN 149 >1C4O-A nrPDB Length = 664 Score = 29.7 bits (65), Expect = 5.4, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 44/111 (39%), Gaps = 11/111 (9%) Query: 102 FLKLYQNNQIMV-FVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVAAMSVAQRV 160 ++ ++ + V +G TG+GKT + + + P P ++ A AQ Sbjct: 20 LVEALRDGERFVTLLGATGTGKTVTMAKVIEALGRPA------LVLAPNKILA---AQLA 70 Query: 161 AEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSC 211 AE ++ V Y I + + + + D + ++A + ++ R Sbjct: 71 AEFRELFPENAVEYFISYYDYYQPEAYVP-GKDLYIEKDASINPEIERLRH 120 >5X6K-A nrPDB Length = 195 Score = 29.3 bits (64), Expect = 6.4, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 19/41 (46%) Query: 104 KLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVA 144 ++ +I+ VG GSGK TQ + V HL + + Sbjct: 5 DKIKDAKIIFVVGGPGSGKGTQCEKVVAKYGYTHLSSGDLL 45 >2D62-A nrPDB Length = 375 Score = 29.3 bits (64), Expect = 6.4, Method: Composition-based stats. Identities = 7/27 (25%), Positives = 15/27 (55%) Query: 100 DEFLKLYQNNQIMVFVGETGSGKTTQI 126 + ++ + +V +G +G GKTT + Sbjct: 23 KDLSLEIKDGEFLVLLGPSGCGKTTTL 49 >1G29-1 nrPDB Length = 372 Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 15/26 (57%) Query: 101 EFLKLYQNNQIMVFVGETGSGKTTQI 126 E ++ + M+ +G +G GKTT + Sbjct: 21 EMSLEVKDGEFMILLGPSGCGKTTTL 46 >1OFI-A nrPDB Length = 310 Score = 29.3 bits (64), Expect = 7.0, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 5/73 (6%) Query: 261 DAPLLAVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAV 320 +AP + V + Y E D I A E+ G ++F+ DEI+ Sbjct: 75 NAPFIKVEATKFTEVGYVGKEVDSIIRDLTDSAGGAIDAVEQNG--IVFI---DEIDKIC 129 Query: 321 RKISLEGDQLVRE 333 +K G + RE Sbjct: 130 KKGEYSGADVSRE 142 >3B6E-A nrPDB Length = 216 Score = 28.9 bits (63), Expect = 7.5, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 57/146 (39%), Gaps = 17/146 (11%) Query: 92 ELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLEN----TQVACTQ 147 EL + + E + + ++ TGSGK T++ ++ D + + +V Sbjct: 31 ELQLRPYQMEVAQPALEGKNIIICLPTGSGK-TRVAVYIAKDHLDKKKKASEPGKVIVLV 89 Query: 148 PRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYM----TDGMLLREAMED 203 + + + ++ + K +G S + K S ++K + +L ++ + Sbjct: 90 NKVLLVEQLFRKEFQPFLKKWYRVIGLSGDTQLKISFPEVVKSCDIIISTAQILENSLLN 149 Query: 204 HD--------LSRYSCIILDEAHERT 221 + LS +S II+DE H Sbjct: 150 LENGEDAGVQLSDFSLIIIDECHHTN 175 >6FRK-x nrPDB Length = 504 Score = 28.9 bits (63), Expect = 7.7, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 12/75 (16%) Query: 90 RRELPVHAQRDEFLKLYQ-----------NNQIMVFVGETGSGKTTQIPQFVLFDEMPHL 138 +R++ HA E +KL +++FVG GSGKTT + + + Sbjct: 71 KRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGW 130 Query: 139 ENTQVACTQPRRVAA 153 + + C R A Sbjct: 131 KTCLI-CADTFRAGA 144 >5L3Q-A nrPDB Length = 442 Score = 28.9 bits (63), Expect = 7.7, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 12/75 (16%) Query: 90 RRELPVHAQRDEFLKLYQ-----------NNQIMVFVGETGSGKTTQIPQFVLFDEMPHL 138 +R++ HA E +KL +++FVG GSGKTT + + + Sbjct: 77 KRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGW 136 Query: 139 ENTQVACTQPRRVAA 153 + + C R A Sbjct: 137 KTCLI-CADTFRAGA 150 >3JAJ-z nrPDB Length = 426 Score = 28.9 bits (63), Expect = 7.7, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 12/75 (16%) Query: 90 RRELPVHAQRDEFLKLYQ-----------NNQIMVFVGETGSGKTTQIPQFVLFDEMPHL 138 +R++ HA E +KL +++FVG GSGKTT + + + Sbjct: 68 KRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGW 127 Query: 139 ENTQVACTQPRRVAA 153 + + C R A Sbjct: 128 KTCLI-CADTFRAGA 141 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.128 0.328 Lambda K H 0.267 0.0393 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,478,315 Number of Sequences: 36641 Number of extensions: 1060843 Number of successful extensions: 4275 Number of sequences better than 10.0: 130 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 131 Number of HSP's that attempted gapping in prelim test: 3991 Number of HSP's gapped (non-prelim): 226 length of query: 767 length of database: 10,336,785 effective HSP length: 105 effective length of query: 662 effective length of database: 6,489,480 effective search space: 4296035760 effective search space used: 4296035760 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 63 (28.9 bits)