BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P53008 (833 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4J5T-A nrPDB 1665 0.0 5MHF-A nrPDB 311 1e-84 4WVB-A nrPDB 47 4e-05 3W7W-A nrPDB 44 2e-04 2I5G-A nrPDB 32 0.77 5ZI1-A nrPDB 32 1.4 4QIW-A nrPDB 31 2.8 1SJJ-A nrPDB 30 3.5 4UWW-A nrPDB 29 6.6 4QJ3-B nrPDB 29 8.5 3OHM-B nrPDB 29 8.7 >4J5T-A nrPDB Length = 811 Score = 1665 bits (4313), Expect = 0.0, Method: Compositional matrix adjust. Identities = 799/799 (100%), Positives = 799/799 (100%) Query: 35 EEYQKFTNESLLWAPYRSNCYFGMRPRYVHESPLIMGIMWFNSLSQDGLHSLRHFATPQD 94 EEYQKFTNESLLWAPYRSNCYFGMRPRYVHESPLIMGIMWFNSLSQDGLHSLRHFATPQD Sbjct: 5 EEYQKFTNESLLWAPYRSNCYFGMRPRYVHESPLIMGIMWFNSLSQDGLHSLRHFATPQD 64 Query: 95 KLQKYGWEVYDPRIGGKEVFIDEKNNLNLTVYFVKSKNGENWSVRVQGEPLDPKRPSTAS 154 KLQKYGWEVYDPRIGGKEVFIDEKNNLNLTVYFVKSKNGENWSVRVQGEPLDPKRPSTAS Sbjct: 65 KLQKYGWEVYDPRIGGKEVFIDEKNNLNLTVYFVKSKNGENWSVRVQGEPLDPKRPSTAS 124 Query: 155 VVLYFSQNGGEIDGKSSLAMIGHDGPNDMKFFGYSKELGEYHLTVKDNFGHYFKNPEYET 214 VVLYFSQNGGEIDGKSSLAMIGHDGPNDMKFFGYSKELGEYHLTVKDNFGHYFKNPEYET Sbjct: 125 VVLYFSQNGGEIDGKSSLAMIGHDGPNDMKFFGYSKELGEYHLTVKDNFGHYFKNPEYET 184 Query: 215 MEVAPGSDCSKTSHLSLQIPDKEVWKARDVFQSLVSDSIRDILEKEETKQRPADLIPSVL 274 MEVAPGSDCSKTSHLSLQIPDKEVWKARDVFQSLVSDSIRDILEKEETKQRPADLIPSVL Sbjct: 185 MEVAPGSDCSKTSHLSLQIPDKEVWKARDVFQSLVSDSIRDILEKEETKQRPADLIPSVL 244 Query: 275 TIRNLYNFNPGNFHYIQKTFDLTKKDGFQFDITYNKLGTTQSISTREQVTELITWSLNEI 334 TIRNLYNFNPGNFHYIQKTFDLTKKDGFQFDITYNKLGTTQSISTREQVTELITWSLNEI Sbjct: 245 TIRNLYNFNPGNFHYIQKTFDLTKKDGFQFDITYNKLGTTQSISTREQVTELITWSLNEI 304 Query: 335 NARFDKQFSFGEGPDSIESVEVKRRFALETLSNLLGGIGYFYGNQLIDRETEFDESQFTE 394 NARFDKQFSFGEGPDSIESVEVKRRFALETLSNLLGGIGYFYGNQLIDRETEFDESQFTE Sbjct: 305 NARFDKQFSFGEGPDSIESVEVKRRFALETLSNLLGGIGYFYGNQLIDRETEFDESQFTE 364 Query: 395 IKLLNAKEEGPFELFTSVPSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFEMIED 454 IKLLNAKEEGPFELFTSVPSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFEMIED Sbjct: 365 IKLLNAKEEGPFELFTSVPSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFEMIED 424 Query: 455 DSGWIAREIILGNEARSKVPQEFQVQNPNIANPPTLLLAFSEMLSRAIENIGDFNSDSYH 514 DSGWIAREIILGNEARSKVPQEFQVQNPNIANPPTLLLAFSEMLSRAIENIGDFNSDSYH Sbjct: 425 DSGWIAREIILGNEARSKVPQEFQVQNPNIANPPTLLLAFSEMLSRAIENIGDFNSDSYH 484 Query: 515 QVMFNSRTAKFMTNNLEANPGLLTEYAKKIYPKLLKHYNWFRKSQTGLIDEYEEILEDEG 574 QVMFNSRTAKFMTNNLEANPGLLTEYAKKIYPKLLKHYNWFRKSQTGLIDEYEEILEDEG Sbjct: 485 QVMFNSRTAKFMTNNLEANPGLLTEYAKKIYPKLLKHYNWFRKSQTGLIDEYEEILEDEG 544 Query: 575 IWDKIHKNEVYRWVGRTFTHCLPSGMDDYPRAQPPDVAELNVDALAWVGVMTRSMKQIAH 634 IWDKIHKNEVYRWVGRTFTHCLPSGMDDYPRAQPPDVAELNVDALAWVGVMTRSMKQIAH Sbjct: 545 IWDKIHKNEVYRWVGRTFTHCLPSGMDDYPRAQPPDVAELNVDALAWVGVMTRSMKQIAH 604 Query: 635 VLKLTQDEQRYAQIEQEVVENLDLLHWSENDNCYCDISIDPEDDEIREFVCHEGYVSVLP 694 VLKLTQDEQRYAQIEQEVVENLDLLHWSENDNCYCDISIDPEDDEIREFVCHEGYVSVLP Sbjct: 605 VLKLTQDEQRYAQIEQEVVENLDLLHWSENDNCYCDISIDPEDDEIREFVCHEGYVSVLP 664 Query: 695 FALKLIPKNSPKLEKVVALMSDPEKIFSDYGLLSLSRQDDYFGKDENYWRGPIWMNINYL 754 FALKLIPKNSPKLEKVVALMSDPEKIFSDYGLLSLSRQDDYFGKDENYWRGPIWMNINYL Sbjct: 665 FALKLIPKNSPKLEKVVALMSDPEKIFSDYGLLSLSRQDDYFGKDENYWRGPIWMNINYL 724 Query: 755 CLDAMRYYYPEVILDVAGEASNAKKLYQSLKINLSNNIYKVWEEQGYCYENYSPIDGHGT 814 CLDAMRYYYPEVILDVAGEASNAKKLYQSLKINLSNNIYKVWEEQGYCYENYSPIDGHGT Sbjct: 725 CLDAMRYYYPEVILDVAGEASNAKKLYQSLKINLSNNIYKVWEEQGYCYENYSPIDGHGT 784 Query: 815 GAEHFTGWTALVVNILGRF 833 GAEHFTGWTALVVNILGRF Sbjct: 785 GAEHFTGWTALVVNILGRF 803 >5MHF-A nrPDB Length = 795 Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 254/833 (30%), Positives = 359/833 (43%), Gaps = 141/833 (16%) Query: 45 LLWAPYRSNCYFGMRPRYVHESPLIMGIMWFNSLSQDGLHS-LRHFATPQDKLQKYGWEV 103 L W YR + YFGM+ R PL+ G+MW + G LRH D + YGWE Sbjct: 37 LFWGTYRPHVYFGMKTR--SPKPLLTGLMWAQQGATPGTPPKLRHTCEQGDGVGPYGWEF 94 Query: 104 YDPRIGGKEVFIDEKNNLNLTVYFVKSKNGE---NWSVRVQGEPLDPKRPSTASVVLYF- 159 +D R G++ D L LT FVK G+ +WS RV EP PS V L+F Sbjct: 95 HDGRTFGRQHIHD--GALRLTTEFVKRPGGQHGGDWSWRVTVEPQASGTPSFPLVSLFFY 152 Query: 160 -SQNGGEIDGKSSLAMIGHDGPNDMKFFGYSKELGEYHLTVKDNFGHYFKNPEYETMEVA 218 +G E+ L IG G G++ ELG++ LT+ + Sbjct: 153 VVTDGQEV----LLPEIGAKG-QLKSISGHTSELGDFRLTL--------------LPPTS 193 Query: 219 PGSDCSKTSHLSLQIPDKEVWKARDVFQSLVSDSIRDILEKEETKQRPADL------IPS 272 PG K H S + W + L +D ++ L + P +P Sbjct: 194 PGDTVPK--HGSYNV----FWSSNPGLPQL-TDMVKSRLNSWFQHRPPGASPDRYLGLPG 246 Query: 273 VLTIRNLYNFNPGNFHYIQKTFDLTKKDGFQFDITYNKLGTTQSIS--TREQVTELITWS 330 L G F Q T F F+ G Q+ Q+T+ + Sbjct: 247 SLKWEERGPSGQGQFLIQQVTLKAPFSVEFVFESGSAATGGNQASGRLVGSQLTQALESH 306 Query: 331 LNEINARFDKQFSFGEGPDSIESVEVKRRFALETLSNLLGGIGYFYGNQLIDRETEFDES 390 RF+K F E S E ++ LS LLGGIGYFYG L+ +T + S Sbjct: 307 AAAFKERFEKTFQLKEKGLSPE----EQALGQVALSGLLGGIGYFYGQGLVLPDTSMEGS 362 Query: 391 QFTEIKLLNAKEEGPFELFTSVPSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFE 450 + + ++ P LF+ VPSR FFPRGF WDEGFH L + +D L E L W Sbjct: 363 E----QKMDPALFPPVPLFSGVPSRSFFPRGFLWDEGFHQLVVQRWDPHLTREALGHWLG 418 Query: 451 MIEDDSGWIAREIILGNEARSKVPQEFQVQNPNIANPPTLLLAFSEMLSRAIENIGDFNS 510 ++ D GWI RE ILG+EAR++VP EF VQ ANPPTLLL ML G Sbjct: 419 LLNAD-GWIGREQILGDEARARVPPEFLVQRAAHANPPTLLLPVVHMLE------GHDPD 471 Query: 511 DSYHQVMFNSRTAKFMTNNLEANPGLLTEYAKKIYPKLLKHYNWFRKSQTGLIDEYEEIL 570 D + +K +P+L ++W +SQ G + Sbjct: 472 D--------------------------LAFLRKAFPRLHAWFSWLHQSQAGPVPL----- 500 Query: 571 EDEGIWDKIHKNEVYRWVGRTFT-------HCLPSGMDDYPRAQPPDVAELNVDALAWVG 623 YRW GR LPSG+DDYPRA P AE ++D WV Sbjct: 501 -------------SYRWRGRDLALPTLLNPKTLPSGLDDYPRASHPSTAERHLDLRCWVA 547 Query: 624 VMTRSMKQIAHVLKLTQDEQRYAQIEQEVVE--NLDLLHWSENDNCYCD---------IS 672 + R + Q+A L T+ + + E +LD LHW+ + D + Sbjct: 548 LGARVLSQLAEQLGETEAAAELGPLAASLEEPGSLDELHWAPELGVFADFGNHTKAVQLK 607 Query: 673 IDPEDDEIR---------EFVCHEGYVSVLPFALKLIPKNSPKLEKVVALMSDPEKIFSD 723 P +R ++V GYVS+ P L+L+ +SP+L ++ +++D ++S Sbjct: 608 SRPPQGLVRVVGRPPPRLQYVDALGYVSLFPLLLQLLDPSSPRLGPLLDVLADSRHLWSP 667 Query: 724 YGLLSLSRQDDYFGK-----DENYWRGPIWMNINYLCLDAMRYYYPEVILDVAGEAS-NA 777 +GL SLS ++ + D YWRG +W+NINYL L A+ +Y V G A Sbjct: 668 FGLRSLSASSLFYKQRNTEHDPPYWRGAVWLNINYLALGALHHYG-----HVEGPHKVQA 722 Query: 778 KKLYQSLKINLSNNIYKVWEEQGYCYENYSPIDGHGTGAEHFTGWTALVVNIL 830 KLY L+ N+ N+ + ++ G+ +E YS DG G G F GWT+LV+ I+ Sbjct: 723 AKLYHELRANVVRNVRQQYQATGFLWEQYSDQDGRGMGCRPFQGWTSLVLLIM 775 >4WVB-A nrPDB Length = 420 Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 94/471 (19%), Positives = 171/471 (36%), Gaps = 102/471 (21%) Query: 395 IKLLNAKEEGPFELFTSVPSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFEMIED 454 +++L G F +VP+ G +P + WD F L + D++ A++ L F+ + Sbjct: 9 VEVLQRNSRGAF----TVPAHGLYPYQWLWDSAFIALGWTQVDWERAWQELLCLFDYGQG 64 Query: 455 DSGWIAREIILGNEARSKVPQEFQVQNPNIANPPTLLLAFSEMLSRAIENIGDFNSDSYH 514 G + I+ ++R P A P T + +++ + + Sbjct: 65 PDG-MLPHIVFHEQSRDYFPGPDVWGREARAQPATSGITQPPVVATVVRYL--------- 114 Query: 515 QVMFNSRTAKFMTNNLEANPGLLTEYAKKIY--PKLLKHYNW-------FRKSQTGLIDE 565 E +P + Y PKLL + W +R ++ Sbjct: 115 ---------------YEKDPDRDRARERARYLFPKLLAFHRWLYHARDPYRTGLVVIVHP 159 Query: 566 YEEILEDEGIWDKIHKNEVYRWVGRTFTHCLPSGMDDYPRAQPPDVAELNVDALAWVGVM 625 +E +++ WDK + R LP Y R DV +N + Sbjct: 160 WESGMDNSPAWDKP--------LSRVPVENLPP----YERR---DVKHVNPEERPRKEDY 204 Query: 626 TRSMKQIAHVLKLTQDEQR-YAQIEQEVVE-NLDLLHWSENDNCYCDISIDPEDD-EIRE 682 R + + +L D + Y Q +VV+ + + N + Y + ED EI E Sbjct: 205 DRYLSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVLLQEDPYEIEE 264 Query: 683 FVCH------------EGY------VSVLPFALK----LIP--KNSPKLEKVVALMSDPE 718 ++ G+ V+ P A+K +P +P + L + E Sbjct: 265 WIVRGEVGLEALWDREAGFYFSWDLVAGEPIAVKTSAGFLPLFAGTPHQGRASLLAQEAE 324 Query: 719 KIF--SDYGLLSLSRQDDYFGKDENYWRGPIWMNINYLCLDAMRYYYPEVILDVAGEASN 776 + + Y L S+ +F + YWRGP+W+N+N++ + R Y Sbjct: 325 RWGEKARYLLPSVDPTSPFF-EPGRYWRGPVWINVNWMVAEGFRDY-------------- 369 Query: 777 AKKLYQSLKINLSNNIYKVWEEQGYCYENYSPIDGHGTGAEHFTGWTALVV 827 + +L L + + E +G+ E Y P+ G G G E F+ W+A + Sbjct: 370 ---GFAALAARLKADALALMEREGFR-EYYDPLTGQGRGGEGFS-WSAALA 415 >3W7W-A nrPDB Length = 760 Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 50/223 (22%), Positives = 93/223 (41%), Gaps = 27/223 (12%) Query: 615 NVDALAWVGVMTRSMKQIAHVLKLTQDEQRYAQIEQEVVENLDLLHWSENDNCYCDISID 674 +VD +++ + ++A +L ++ +RY Q+ Q++ + ++ + Y D+ I Sbjct: 550 SVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRI- 608 Query: 675 PEDDEIREFVCHEGYVSVLPFALKLIP-----KNSPKLEKVVALMSDPEKIFSDYGLLSL 729 ED + + V P + VV +M DP++ + L + Sbjct: 609 -EDKPLANGCAGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTA 667 Query: 730 SRQDDYFGKDENYWRGPIWMNINYLCLDAM-RYYYPEVILDVAGE-ASNAKKLYQSLKIN 787 + + FG D YWRG +W++ + L M RY Y + L +A +AK L Sbjct: 668 ALTNPAFGADI-YWRGRVWVDQFWFGLKGMERYGYRDDALKLADTFFRHAKGL------- 719 Query: 788 LSNNIYKVWEEQGYCYENYSPIDGHGTGAEHFTGWTALVVNIL 830 G NY+P+ G GA +F+ W+A + +L Sbjct: 720 ---------TADGPIQANYNPLTGAQQGAPNFS-WSAAHLYML 752 >2I5G-A nrPDB Length = 325 Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust. Identities = 12/34 (35%), Positives = 21/34 (61%) Query: 591 TFTHCLPSGMDDYPRAQPPDVAELNVDALAWVGV 624 ++HCLPSG+ ++PR + + + D +VGV Sbjct: 177 CYSHCLPSGLKEHPRNKSDEELKFIADHGGFVGV 210 >5ZI1-A nrPDB Length = 609 Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust. Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Query: 275 TIRNLYNFNPGNFHYIQKTFDLTKKDGFQFDITYNKLGTTQSISTREQVTELITWSLNEI 334 T N +N+ + + TFDL KD +Q TY+ +S + + V L + +N Sbjct: 328 TTENTFNYGTSSGSTLSHTFDLLSKDIYQ---TYSIAAANKSATWYQAVPLLRLYGINSS 384 Query: 335 NARFDKQFSFGEGPDSIESVEVKRRFALETL 365 N + FSF ++I S + K ++ + L Sbjct: 385 NVLSEDAFSFS---NNIPSSKCKSTYSSDQL 412 >4QIW-A nrPDB Length = 906 Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust. Identities = 44/165 (26%), Positives = 67/165 (40%), Gaps = 37/165 (22%) Query: 193 GEYHLTVKDNFGHYFKNPEYETMEVAPGSDCSKTSHLSLQIPDK-----EVWKARDVFQS 247 G Y LT + G YF E E M + G D ++ L PDK +W + +F Sbjct: 510 GGYLLTRE---GAYFTRYEVEQMLMFAGMDVNE-----LPEPDKYENGEPLWSGKTIFSL 561 Query: 248 LVSDSI----RDILEKEETKQRPAD------LIPSVLTIRNL-YNFNPGNFHYIQKTFDL 296 L+ D + R+ L E + + LIP +R L Y+ F YIQ L Sbjct: 562 LLPDDLTIWYRNKLCDEPERCEALEKLIEEKLIPDPEEVRKLAYD----GFVYIQNGKLL 617 Query: 297 T---------KKDGFQFDITYNKLGTTQSISTREQVTELITWSLN 332 + ++DG DI + G ++ +QVT+L W + Sbjct: 618 SGAVDKKAYGREDGKLLDIIVREYGVERARQFLDQVTKLTIWVIT 662 >1SJJ-A nrPDB Length = 863 Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Query: 296 LTKKDGFQFDITYNKLGTTQSISTREQVTELITWSLNEINARFDKQFSFGEGPDSIESVE 355 L K + F+ D+ ++ Q + +++ EL + +NAR K + D++ ++ Sbjct: 410 LKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQK---ICDQWDNLGALT 466 Query: 356 VKRRFALETLSNLLGGIGYFY 376 KRR ALE LL I Y Sbjct: 467 QKRREALERTEKLLETIDQLY 487 >4UWW-A nrPDB Length = 132 Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Query: 562 LIDEYEEILEDEGIWDKIHK-NEVYRWVGRTFTHCLPSGMDDYPRAQPPDVAELNVDALA 620 I +Y E+E +W + + N V+ W+ + H DDYP+ + V + + L+ Sbjct: 55 FISQYHHGEEEEDVWIGLFRWNSVWAWIDGSKKHYSALDDDDYPKGKHCAVLDESSGFLS 114 Query: 621 W 621 W Sbjct: 115 W 115 >4QJ3-B nrPDB Length = 793 Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust. Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 15/112 (13%) Query: 353 SVEVKRRFALETLSNLLGGIGYFYGNQLIDRETEFDESQFTEIKLLNAKEEGPFELF--- 409 S EV + TL N + + + R F+ S F E K + + P E Sbjct: 483 SSEVNATEEMSTLVNYIEPVKFKSFEAARKRNKCFEMSSFVETKAMEQLTKSPMEFVEYN 542 Query: 410 -----------TSVPSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFE 450 T V S + P+ +W+ G L+ + D+A ++ A FE Sbjct: 543 KQQLSRIYPKGTRVDSSNYMPQ-LFWNVGCQLVALNFQTLDVAMQLNAGVFE 593 >3OHM-B nrPDB Length = 885 Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust. Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 15/112 (13%) Query: 353 SVEVKRRFALETLSNLLGGIGYFYGNQLIDRETEFDESQFTEIKLLNAKEEGPFELF--- 409 S EV + TL N + + + R F+ S F E K + + P E Sbjct: 580 SSEVNATEEMSTLVNYIEPVKFKSFEAARKRNKCFEMSSFVETKAMEQLTKSPMEFVEYN 639 Query: 410 -----------TSVPSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFE 450 T V S + P+ +W+ G L+ + D+A ++ A FE Sbjct: 640 KQQLSRIYPKGTRVDSSNYMPQ-LFWNVGCQLVALNFQTLDVAMQLNAGVFE 690 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4J5T-A nrPDB 1312 0.0 5MHF-A nrPDB 906 0.0 4WVB-A nrPDB 391 e-109 3W7W-A nrPDB 237 2e-62 Sequences not found previously or not previously below threshold: 5OJV-A nrPDB 114 1e-25 5Z6H-A nrPDB 49 8e-06 2WYN-A nrPDB 43 7e-04 6G4G-A nrPDB 37 0.035 1MC3-A nrPDB 35 0.16 3EOQ-A nrPDB 34 0.39 6BHC-A nrPDB 33 0.69 5IAZ-A nrPDB 32 1.3 4U2L-A nrPDB 32 1.5 5GIV-A nrPDB 31 3.0 >4J5T-A nrPDB Length = 811 Score = 1312 bits (3394), Expect = 0.0, Method: Composition-based stats. Identities = 801/802 (99%), Positives = 801/802 (99%), Gaps = 1/802 (0%) Query: 33 EF-EEYQKFTNESLLWAPYRSNCYFGMRPRYVHESPLIMGIMWFNSLSQDGLHSLRHFAT 91 EF EEYQKFTNESLLWAPYRSNCYFGMRPRYVHESPLIMGIMWFNSLSQDGLHSLRHFAT Sbjct: 2 EFMEEYQKFTNESLLWAPYRSNCYFGMRPRYVHESPLIMGIMWFNSLSQDGLHSLRHFAT 61 Query: 92 PQDKLQKYGWEVYDPRIGGKEVFIDEKNNLNLTVYFVKSKNGENWSVRVQGEPLDPKRPS 151 PQDKLQKYGWEVYDPRIGGKEVFIDEKNNLNLTVYFVKSKNGENWSVRVQGEPLDPKRPS Sbjct: 62 PQDKLQKYGWEVYDPRIGGKEVFIDEKNNLNLTVYFVKSKNGENWSVRVQGEPLDPKRPS 121 Query: 152 TASVVLYFSQNGGEIDGKSSLAMIGHDGPNDMKFFGYSKELGEYHLTVKDNFGHYFKNPE 211 TASVVLYFSQNGGEIDGKSSLAMIGHDGPNDMKFFGYSKELGEYHLTVKDNFGHYFKNPE Sbjct: 122 TASVVLYFSQNGGEIDGKSSLAMIGHDGPNDMKFFGYSKELGEYHLTVKDNFGHYFKNPE 181 Query: 212 YETMEVAPGSDCSKTSHLSLQIPDKEVWKARDVFQSLVSDSIRDILEKEETKQRPADLIP 271 YETMEVAPGSDCSKTSHLSLQIPDKEVWKARDVFQSLVSDSIRDILEKEETKQRPADLIP Sbjct: 182 YETMEVAPGSDCSKTSHLSLQIPDKEVWKARDVFQSLVSDSIRDILEKEETKQRPADLIP 241 Query: 272 SVLTIRNLYNFNPGNFHYIQKTFDLTKKDGFQFDITYNKLGTTQSISTREQVTELITWSL 331 SVLTIRNLYNFNPGNFHYIQKTFDLTKKDGFQFDITYNKLGTTQSISTREQVTELITWSL Sbjct: 242 SVLTIRNLYNFNPGNFHYIQKTFDLTKKDGFQFDITYNKLGTTQSISTREQVTELITWSL 301 Query: 332 NEINARFDKQFSFGEGPDSIESVEVKRRFALETLSNLLGGIGYFYGNQLIDRETEFDESQ 391 NEINARFDKQFSFGEGPDSIESVEVKRRFALETLSNLLGGIGYFYGNQLIDRETEFDESQ Sbjct: 302 NEINARFDKQFSFGEGPDSIESVEVKRRFALETLSNLLGGIGYFYGNQLIDRETEFDESQ 361 Query: 392 FTEIKLLNAKEEGPFELFTSVPSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFEM 451 FTEIKLLNAKEEGPFELFTSVPSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFEM Sbjct: 362 FTEIKLLNAKEEGPFELFTSVPSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFEM 421 Query: 452 IEDDSGWIAREIILGNEARSKVPQEFQVQNPNIANPPTLLLAFSEMLSRAIENIGDFNSD 511 IEDDSGWIAREIILGNEARSKVPQEFQVQNPNIANPPTLLLAFSEMLSRAIENIGDFNSD Sbjct: 422 IEDDSGWIAREIILGNEARSKVPQEFQVQNPNIANPPTLLLAFSEMLSRAIENIGDFNSD 481 Query: 512 SYHQVMFNSRTAKFMTNNLEANPGLLTEYAKKIYPKLLKHYNWFRKSQTGLIDEYEEILE 571 SYHQVMFNSRTAKFMTNNLEANPGLLTEYAKKIYPKLLKHYNWFRKSQTGLIDEYEEILE Sbjct: 482 SYHQVMFNSRTAKFMTNNLEANPGLLTEYAKKIYPKLLKHYNWFRKSQTGLIDEYEEILE 541 Query: 572 DEGIWDKIHKNEVYRWVGRTFTHCLPSGMDDYPRAQPPDVAELNVDALAWVGVMTRSMKQ 631 DEGIWDKIHKNEVYRWVGRTFTHCLPSGMDDYPRAQPPDVAELNVDALAWVGVMTRSMKQ Sbjct: 542 DEGIWDKIHKNEVYRWVGRTFTHCLPSGMDDYPRAQPPDVAELNVDALAWVGVMTRSMKQ 601 Query: 632 IAHVLKLTQDEQRYAQIEQEVVENLDLLHWSENDNCYCDISIDPEDDEIREFVCHEGYVS 691 IAHVLKLTQDEQRYAQIEQEVVENLDLLHWSENDNCYCDISIDPEDDEIREFVCHEGYVS Sbjct: 602 IAHVLKLTQDEQRYAQIEQEVVENLDLLHWSENDNCYCDISIDPEDDEIREFVCHEGYVS 661 Query: 692 VLPFALKLIPKNSPKLEKVVALMSDPEKIFSDYGLLSLSRQDDYFGKDENYWRGPIWMNI 751 VLPFALKLIPKNSPKLEKVVALMSDPEKIFSDYGLLSLSRQDDYFGKDENYWRGPIWMNI Sbjct: 662 VLPFALKLIPKNSPKLEKVVALMSDPEKIFSDYGLLSLSRQDDYFGKDENYWRGPIWMNI 721 Query: 752 NYLCLDAMRYYYPEVILDVAGEASNAKKLYQSLKINLSNNIYKVWEEQGYCYENYSPIDG 811 NYLCLDAMRYYYPEVILDVAGEASNAKKLYQSLKINLSNNIYKVWEEQGYCYENYSPIDG Sbjct: 722 NYLCLDAMRYYYPEVILDVAGEASNAKKLYQSLKINLSNNIYKVWEEQGYCYENYSPIDG 781 Query: 812 HGTGAEHFTGWTALVVNILGRF 833 HGTGAEHFTGWTALVVNILGRF Sbjct: 782 HGTGAEHFTGWTALVVNILGRF 803 >5MHF-A nrPDB Length = 795 Score = 906 bits (2340), Expect = 0.0, Method: Composition-based stats. Identities = 254/834 (30%), Positives = 359/834 (43%), Gaps = 141/834 (16%) Query: 45 LLWAPYRSNCYFGMRPRYVHESPLIMGIMWFNSLSQDGLHS-LRHFATPQDKLQKYGWEV 103 L W YR + YFGM+ R PL+ G+MW + G LRH D + YGWE Sbjct: 37 LFWGTYRPHVYFGMKTR--SPKPLLTGLMWAQQGATPGTPPKLRHTCEQGDGVGPYGWEF 94 Query: 104 YDPRIGGKEVFIDEKNNLNLTVYFVKSKNGE---NWSVRVQGEPLDPKRPSTASVVLYF- 159 +D R G++ D L LT FVK G+ +WS RV EP PS V L+F Sbjct: 95 HDGRTFGRQHIHD--GALRLTTEFVKRPGGQHGGDWSWRVTVEPQASGTPSFPLVSLFFY 152 Query: 160 -SQNGGEIDGKSSLAMIGHDGPNDMKFFGYSKELGEYHLTVKDNFGHYFKNPEYETMEVA 218 +G E+ L IG G G++ ELG++ LT+ + Sbjct: 153 VVTDGQEV----LLPEIGAKG-QLKSISGHTSELGDFRLTL--------------LPPTS 193 Query: 219 PGSDCSKTSHLSLQIPDKEVWKARDVFQSLVSDSIRDILEKEETKQRPADL------IPS 272 PG K H S + W + L +D ++ L + P +P Sbjct: 194 PGDTVPK--HGSYNV----FWSSNPGLPQL-TDMVKSRLNSWFQHRPPGASPDRYLGLPG 246 Query: 273 VLTIRNLYNFNPGNFHYIQKTFDLTKKDGFQFDITYNKLGTTQSIS--TREQVTELITWS 330 L G F Q T F F+ G Q+ Q+T+ + Sbjct: 247 SLKWEERGPSGQGQFLIQQVTLKAPFSVEFVFESGSAATGGNQASGRLVGSQLTQALESH 306 Query: 331 LNEINARFDKQFSFGEGPDSIESVEVKRRFALETLSNLLGGIGYFYGNQLIDRETEFDES 390 RF+K F E S E ++ LS LLGGIGYFYG L+ +T + S Sbjct: 307 AAAFKERFEKTFQLKEKGLSPE----EQALGQVALSGLLGGIGYFYGQGLVLPDTSMEGS 362 Query: 391 QFTEIKLLNAKEEGPFELFTSVPSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFE 450 + + ++ P LF+ VPSR FFPRGF WDEGFH L + +D L E L W Sbjct: 363 E----QKMDPALFPPVPLFSGVPSRSFFPRGFLWDEGFHQLVVQRWDPHLTREALGHWLG 418 Query: 451 MIEDDSGWIAREIILGNEARSKVPQEFQVQNPNIANPPTLLLAFSEMLSRAIENIGDFNS 510 ++ D GWI RE ILG+EAR++VP EF VQ ANPPTLLL ML G Sbjct: 419 LLNAD-GWIGREQILGDEARARVPPEFLVQRAAHANPPTLLLPVVHMLE------GHDPD 471 Query: 511 DSYHQVMFNSRTAKFMTNNLEANPGLLTEYAKKIYPKLLKHYNWFRKSQTGLIDEYEEIL 570 D + +K +P+L ++W +SQ G + Sbjct: 472 D--------------------------LAFLRKAFPRLHAWFSWLHQSQAGPVPL----- 500 Query: 571 EDEGIWDKIHKNEVYRWVGRTFT-------HCLPSGMDDYPRAQPPDVAELNVDALAWVG 623 YRW GR LPSG+DDYPRA P AE ++D WV Sbjct: 501 -------------SYRWRGRDLALPTLLNPKTLPSGLDDYPRASHPSTAERHLDLRCWVA 547 Query: 624 VMTRSMKQIAHVLKLTQDEQRYAQIEQEVVE--NLDLLHWSENDNCYCD---------IS 672 + R + Q+A L T+ + + E +LD LHW+ + D + Sbjct: 548 LGARVLSQLAEQLGETEAAAELGPLAASLEEPGSLDELHWAPELGVFADFGNHTKAVQLK 607 Query: 673 IDPEDDEIR---------EFVCHEGYVSVLPFALKLIPKNSPKLEKVVALMSDPEKIFSD 723 P +R ++V GYVS+ P L+L+ +SP+L ++ +++D ++S Sbjct: 608 SRPPQGLVRVVGRPPPRLQYVDALGYVSLFPLLLQLLDPSSPRLGPLLDVLADSRHLWSP 667 Query: 724 YGLLSLSRQDDYFGK-----DENYWRGPIWMNINYLCLDAMRYYYPEVILDVAGEAS-NA 777 +GL SLS ++ + D YWRG +W+NINYL L A+ +Y V G A Sbjct: 668 FGLRSLSASSLFYKQRNTEHDPPYWRGAVWLNINYLALGALHHYG-----HVEGPHKVQA 722 Query: 778 KKLYQSLKINLSNNIYKVWEEQGYCYENYSPIDGHGTGAEHFTGWTALVVNILG 831 KLY L+ N+ N+ + ++ G+ +E YS DG G G F GWT+LV+ I+ Sbjct: 723 AKLYHELRANVVRNVRQQYQATGFLWEQYSDQDGRGMGCRPFQGWTSLVLLIMA 776 >4WVB-A nrPDB Length = 420 Score = 391 bits (1005), Expect = e-109, Method: Composition-based stats. Identities = 95/476 (19%), Positives = 172/476 (36%), Gaps = 102/476 (21%) Query: 395 IKLLNAKEEGPFELFTSVPSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFEMIED 454 +++L G F +VP+ G +P + WD F L + D++ A++ L F+ + Sbjct: 9 VEVLQRNSRGAF----TVPAHGLYPYQWLWDSAFIALGWTQVDWERAWQELLCLFDYGQG 64 Query: 455 DSGWIAREIILGNEARSKVPQEFQVQNPNIANPPTLLLAFSEMLSRAIENIGDFNSDSYH 514 G + I+ ++R P A P T + +++ + + Sbjct: 65 PDG-MLPHIVFHEQSRDYFPGPDVWGREARAQPATSGITQPPVVATVVRYL--------- 114 Query: 515 QVMFNSRTAKFMTNNLEANPGLLTEYAKKIY--PKLLKHYNW-------FRKSQTGLIDE 565 E +P + Y PKLL + W +R ++ Sbjct: 115 ---------------YEKDPDRDRARERARYLFPKLLAFHRWLYHARDPYRTGLVVIVHP 159 Query: 566 YEEILEDEGIWDKIHKNEVYRWVGRTFTHCLPSGMDDYPRAQPPDVAELNVDALAWVGVM 625 +E +++ WDK + R LP Y R DV +N + Sbjct: 160 WESGMDNSPAWDKP--------LSRVPVENLPP----YERR---DVKHVNPEERPRKEDY 204 Query: 626 TRSMKQIAHVLKLTQDEQR-YAQIEQEVVE-NLDLLHWSENDNCYCDISIDPEDD-EIRE 682 R + + +L D + Y Q +VV+ + + N + Y + ED EI E Sbjct: 205 DRYLSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVLLQEDPYEIEE 264 Query: 683 FVCH------------EGY------VSVLPFALK----LIP--KNSPKLEKVVALMSDPE 718 ++ G+ V+ P A+K +P +P + L + E Sbjct: 265 WIVRGEVGLEALWDREAGFYFSWDLVAGEPIAVKTSAGFLPLFAGTPHQGRASLLAQEAE 324 Query: 719 KIF--SDYGLLSLSRQDDYFGKDENYWRGPIWMNINYLCLDAMRYYYPEVILDVAGEASN 776 + + Y L S+ +F + YWRGP+W+N+N++ + R Y Sbjct: 325 RWGEKARYLLPSVDPTSPFF-EPGRYWRGPVWINVNWMVAEGFRDYG------------- 370 Query: 777 AKKLYQSLKINLSNNIYKVWEEQGYCYENYSPIDGHGTGAEHFTGWTALVVNILGR 832 + +L L + + E +G+ E Y P+ G G G E F+ W+A + R Sbjct: 371 ----FAALAARLKADALALMEREGFR-EYYDPLTGQGRGGEGFS-WSAALALFWTR 420 >3W7W-A nrPDB Length = 760 Score = 237 bits (603), Expect = 2e-62, Method: Composition-based stats. Identities = 57/277 (20%), Positives = 112/277 (40%), Gaps = 32/277 (11%) Query: 566 YEEILEDEGIWDKIHKNEVYRWVGRTFTHCLPSGMDDYPRAQPP-----DVAELNVDALA 620 +E +D ++ I K ++ ++V + R+Q + + +VD + Sbjct: 496 WESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQAS 555 Query: 621 WVGVMTRSMKQIAHVLKLTQDEQRYAQIEQEVVENLDLLHWSENDNCYCDISIDPEDDEI 680 ++ + ++A +L ++ +RY Q+ Q++ + ++ + Y D+ I ED + Sbjct: 556 YMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRI--EDKPL 613 Query: 681 REFVCHEGYVSVLPFALKLIP-----KNSPKLEKVVALMSDPEKIFSDYGLLSLSRQDDY 735 + V P + VV +M DP++ + L + + + Sbjct: 614 ANGCAGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPA 673 Query: 736 FGKDENYWRGPIWMNINYLCLDAM-RYYYPEVILDVAGE-ASNAKKLYQSLKINLSNNIY 793 FG D YWRG +W++ + L M RY Y + L +A +AK L Sbjct: 674 FGADI-YWRGRVWVDQFWFGLKGMERYGYRDDALKLADTFFRHAKGL------------- 719 Query: 794 KVWEEQGYCYENYSPIDGHGTGAEHFTGWTALVVNIL 830 G NY+P+ G GA +F+ W+A + +L Sbjct: 720 ---TADGPIQANYNPLTGAQQGAPNFS-WSAAHLYML 752 >5OJV-A nrPDB Length = 448 Score = 114 bits (286), Expect = 1e-25, Method: Composition-based stats. Identities = 67/463 (14%), Positives = 136/463 (29%), Gaps = 106/463 (22%) Query: 417 FFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFEMIEDDSGWIAREIILGNEARSKVPQE 476 +P + WD F + + + A L + + +G + I+ N P Sbjct: 37 LYPHMWSWDAAFVAIGLAPLSVERAVVELDTLLS-AQWRNG-MIPHIVFANGVDGYFPGP 94 Query: 477 FQVQNPNIANPP-----TLLLAFSEMLSRAIENIGDFNSDSYHQVMFNSRTAKFMTNNLE 531 + +A+ T + + + A++ I + ++RT T + Sbjct: 95 ARWATATLADNAPRNRLTSGITQPPVHAIAVQRI-----------LEHARTRGRSTRAVA 143 Query: 532 ANPGLLTEYAKKIYPKLLKHYNWF-------RKSQTGLIDEYEEILEDEGIWDKIHKNEV 584 + + + L++ + W + + L +E +++ WD + N V Sbjct: 144 E------AFLDRRWGDLMRWHRWLAECRDRNERGRITLYHGWESGMDNSPRWDSAYANVV 197 Query: 585 YRWVGRTFTHCLPSGMDDYPRAQPPDVAELNVDALAWVGVMTRSMKQIAHVLKLTQDEQR 644 P + +Y RA +V + G R + + + + D++R Sbjct: 198 ------------PGKLPEYQRAD--NVIITDPSQRPSDGEYDRYLWLLEEMKAVRYDDER 243 Query: 645 YAQ-IEQEVVENLDLLHWSENDNCYCDISIDPEDD------------------------- 678 + +V + +S +I D + Sbjct: 244 LPSVMSFQVEDVFFSAIFSVACQVLAEIGEDYKRPHADVKDLYLWAERFRAGVVETTDQR 303 Query: 679 ---------EIREFVCHEGYVSVLPFALKLIPKNSPKLEKVVALMSDPEKIFSD---YGL 726 +++ E P +P + + ++ L+ P YGL Sbjct: 304 TGAARDFDVLAEKWLVTETAAQFAPLLCGGLPHDRER--ALLKLLEGPRFCGHPDLKYGL 361 Query: 727 -LSLSRQDDYFGKDENYWRGPIWMNINYLCLDAMRYYYPEVILDVAGEASNAKKLYQSLK 785 S S F + YWRGP+W + +L A++ + + Sbjct: 362 IPSTSPVSRDF-RPREYWRGPVWPVLTWLFSWCF-----------------ARRGWAE-R 402 Query: 786 INLSNNIYKVWEEQGYCYENYSPIDGHGTGAEHFTGWTALVVN 828 L G Y P G G+ WTA V Sbjct: 403 ARLLRQEGLRQASDGSFAAYYEPFTGEPLGSMQ-QSWTAAAVL 444 >5Z6H-A nrPDB Length = 563 Score = 49.1 bits (115), Expect = 8e-06, Method: Composition-based stats. Identities = 58/406 (14%), Positives = 123/406 (30%), Gaps = 51/406 (12%) Query: 405 PFELFTSVPSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFEMIEDDSGWIAREII 464 P VP G F +YWD F +L + E D + F D G I Sbjct: 149 PLPKPYVVPG-GRFREVYYWDSYFTMLGLAESDHWDKISDMVDNFAYEIDTFGHIPNGNR 207 Query: 465 LGNEARSKVPQEFQVQNPNIA-NPPTLLLAFSEMLSRAIENIGDFNSDSYHQVMFNSRTA 523 +RS+ P F + +A + L + + + D A Sbjct: 208 SYYLSRSQ-PPFFSMMVELLATHDSDALKKYRPQMEKEYAYWMDGVD------ALQPGQA 260 Query: 524 KFMTNNLEANPGLLTEYAKKIYPKLLKHYNWFRKSQTGLIDEYEEILEDEGIWDKIHKNE 583 L+ L + + P+ + +++ EI D + Sbjct: 261 NKRVVKLDDGAILNRYWDDRDTPRPESWLDDVNTAKSNPNRPATEIYRDLRSAAASGWDF 320 Query: 584 VYRWVGRTFTHCLPSGMDDYPR-AQPPDVAELNVDALAWVGVMTRSMKQIAHVLKLTQDE 642 RW MDD + + + VD A + M + + + + Sbjct: 321 SSRW------------MDDPQKLGTIRTTSIVPVDLNALMFKMEKLLARASQESGDAASA 368 Query: 643 QRYAQIEQEVVENLDLLHWSENDNCYCDISIDPEDDEIREFVCHEGYVSVLPFALKLIPK 702 +Y + + ++ W++ + Y D + + ++R + ++ P +K Sbjct: 369 SKYEALATARQKAIESHLWNDKEGWYADYDL--KSKKVRNQLTAA---ALFPLYVK--AA 421 Query: 703 NSPKLEKVVALMSDPEKIFSDYGLLSLSRQDDYFGKDENYWRGPI-WMNINYLCLDAMRY 761 + +KV + ++ G+ + + W P W + ++ + ++ Sbjct: 422 AQDRADKVA--AATSSRLLKPGGIATTTVNS------GQQWDAPNGWAPLQWVAAEGLQN 473 Query: 762 YYPEVILDVAGEASNAKKLYQSLKINLSNNIYKVWEEQGYCYENYS 807 Y E K+ + N+ ++ + E Y Sbjct: 474 YGQE-------------KVSMDVTWRFLKNVQHTYDREKKLVEKYD 506 >2WYN-A nrPDB Length = 535 Score = 42.5 bits (98), Expect = 7e-04, Method: Composition-based stats. Identities = 58/428 (13%), Positives = 130/428 (30%), Gaps = 73/428 (17%) Query: 405 PFELFTSVPSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEILASWFEMIEDDSGWIAREII 464 P VP G F +YWD F +L + E W + + D A EI Sbjct: 111 PLPEPYVVPG-GRFREVYYWDSYFTMLGLAES---------GHW-DKVADMVANFAHEI- 158 Query: 465 LGNEARSKVPQEFQVQNPNIANPPTLLLAFSEMLSRAIENIGDFNSDSYHQVM------- 517 + +P + + + PP L M+ ++ GD Y M Sbjct: 159 ---DTYGHIPNGNRSYYLSRSQPPFFAL----MVELLAQHEGDAALKQYLPQMQKEYAYW 211 Query: 518 ------FNSRTAKFMTNNLEANPGLLTEYAKKIYPKLLKHYNWFRKSQTGLIDEYEEILE 571 + + L+ L + + P+ +++ EI Sbjct: 212 MDGVENLQAGQQEKRVVKLQDGTLLNRYWDDRDTPRPESWVEDIATAKSNPNRPATEIYR 271 Query: 572 DEGIWDKIHKNEVYRWVGRTFTHCLPSGMDDYPRAQPPDVAELNVDALAWVGVMTRSMKQ 631 D + RW+ P ++ + + VD + + M + + + Sbjct: 272 DLRSAAASGWDFSSRWMDN------PQQLN-----TLRTTSIVPVDLNSLMFKMEKILAR 320 Query: 632 IAHVLKLTQDEQRYAQIEQEVVENLDLLHWSENDNCYCDISIDPEDDEIREFVCHEGYVS 691 + +Y + + ++ W++ Y D + +R + + Sbjct: 321 ASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDLKSHK--VRNQLTAA---A 375 Query: 692 VLPFALKLIPKNSPKLEKVVALMSDPE-KIFSDYGLLSLSRQDDYFGKDENYWRGPI-WM 749 + P + N+ ++ + + + + GL + S + W P W Sbjct: 376 LFPLYV-----NAAAKDRANKMATATKTHLLQPGGLNTTSVKS------GQQWDAPNGWA 424 Query: 750 NINYLCLDAMRYYYPEVI---------LDVAGEASNAKKLYQSLKINLSNNIYKVWE--- 797 + ++ + ++ Y + + +V KKL + ++ + E Sbjct: 425 PLQWVATEGLQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPL 484 Query: 798 EQGYCYEN 805 + G+ + N Sbjct: 485 QDGFGWTN 492 >6G4G-A nrPDB Length = 840 Score = 37.1 bits (84), Expect = 0.035, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 7/64 (10%) Query: 720 IFSDYGLLSLSRQDDYFGKDENYWRG-PIWMNINYLCLDAMRYYYPEVILDVAGEASNAK 778 + ++ L S+ + + +W G PIW+ Y L A YY+P + V G N Sbjct: 190 LNKNFSLSSVEKSNPA------WWSGQPIWLTAMYQGLKAASYYWPGSDVAVNGSFPNIY 243 Query: 779 KLYQ 782 + Y Sbjct: 244 RNYS 247 >1MC3-A nrPDB Length = 296 Score = 34.8 bits (78), Expect = 0.16, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 8/79 (10%) Query: 65 ESPLIMG-IMWFNSLSQDGLHSLRHFATPQDKLQKYGWEVYDPRIGGKEVFIDEKNNLNL 123 S L++G ++F LRH A + +G++V DP G F D ++L Sbjct: 104 PSCLVLGDNIFFGQGFSP---KLRHVAARTEGATVFGYQVMDPERFGVVEFDDNFRAISL 160 Query: 124 TVYFVKSKNGENWSVRVQG 142 + + V G Sbjct: 161 E----EKPKQPKSNWAVTG 175 >3EOQ-A nrPDB Length = 406 Score = 33.7 bits (75), Expect = 0.39, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 66/201 (32%), Gaps = 27/201 (13%) Query: 530 LEANPGLLT-EYAKKIYPKLLKHYNWFRKSQTGLIDEYEEILEDEGIWDKIHKNEVYRWV 588 + PG + E+A+ + + N ++ + E + + KN V Sbjct: 129 YQDRPGFMAYEWARARFFQGHPLGNSVLGTRESITALTREGMAAYHRRRYLPKNMVLAAT 188 Query: 589 GRT-----------FTHCLPSGMDDYPRAQPPDVAELNVDALAWVGVMTRSMKQIAHVLK 637 GR T P G + RA PP V+ + + + + Sbjct: 189 GRVDFDRLLAEAERLTEAWPEG--EAERAYPPLTPAFGVEERPYEKARALYLVALFPGVA 246 Query: 638 LTQDEQRYAQIEQEV--VENLDLLHWSENDNCYCDISIDPEDDEIREFVCHEGYVSVLPF 695 ++ + Q+ + E LH++ D +++ ++ R H YV P Sbjct: 247 YQEEARFPGQVLAHLLGEEGSGRLHFALVDKGLAEVASFGLEEADRAGTFHA-YVQADP- 304 Query: 696 ALKLIPKNSPKLEKVVALMSD 716 + +V+A++ + Sbjct: 305 ---------ARKGEVLAVLQE 316 >6BHC-A nrPDB Length = 438 Score = 32.5 bits (72), Expect = 0.69, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 46/110 (41%), Gaps = 6/110 (5%) Query: 596 LPSGMDDYPRAQPPDVAELNVDALAWVGVMTRSMKQIAHVLKLTQDEQRYAQIEQEVVEN 655 LP+ D+ P + + ++ + + +R ++Q+A L +R + + + Sbjct: 292 LPNPFDENPELKEREYTRADLPRIPFRSPYSRGLQQLASCLLNPNPSERILISDAKGI-- 349 Query: 656 LDLLHWSENDNCY----CDISIDPEDDEIREFVCHEGYVSVLPFALKLIP 701 L L W ++ + S+ + ++ ++ + + ++ FA K + Sbjct: 350 LQCLLWGPREDLFQTFTACPSLVQRNTLLQNWLDIKRTLLMIKFAEKSLD 399 >5IAZ-A nrPDB Length = 122 Score = 31.7 bits (70), Expect = 1.3, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 4/60 (6%) Query: 179 GPNDMKFFGYSKELGEYHLTVKDNFGHYFKNPEYETMEV----APGSDCSKTSHLSLQIP 234 G + G ++ EYH +K+ + PE+ T +V APG S S P Sbjct: 1 GSHMRTVSGVCADVSEYHPNIKNWQIESYGEPEFHTAKVHLKCAPGQTISAIKFASFGTP 60 >4U2L-A nrPDB Length = 510 Score = 31.7 bits (70), Expect = 1.5, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 5/88 (5%) Query: 388 DESQFTEIKLLNAKEEGPFELFTSV---PSRGFFPRGFYWDEGFHLLQIMEYDFDLAFEI 444 D S F EI + A E L+ ++ P RG F D L A Sbjct: 350 DSSVFAEIAPMPAGLETWVSLYLAITKNPQRGTFVYDAATDRA--KLNWTRDQNAPAVNA 407 Query: 445 LASWFEMIEDDSGWIAREIILGNEARSK 472 + F+ I +G I R + G + ++ Sbjct: 408 AKALFDRINKANGTIYRYDLFGTQLKAF 435 >5GIV-A nrPDB Length = 503 Score = 30.6 bits (67), Expect = 3.0, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 21/56 (37%) Query: 498 LSRAIENIGDFNSDSYHQVMFNSRTAKFMTNNLEANPGLLTEYAKKIYPKLLKHYN 553 L G + N +A+F ANPGL ++A+K + +L Sbjct: 405 LQDVHWYFGPIGGSFQGYTIGNVLSAQFYAAAEAANPGLEADFARKDFSRLHGWLR 460 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.305 0.119 0.316 Lambda K H 0.267 0.0358 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,758,521 Number of Sequences: 36641 Number of extensions: 1181677 Number of successful extensions: 3170 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 27 Number of HSP's that attempted gapping in prelim test: 3095 Number of HSP's gapped (non-prelim): 52 length of query: 833 length of database: 10,336,785 effective HSP length: 105 effective length of query: 728 effective length of database: 6,489,480 effective search space: 4724341440 effective search space used: 4724341440 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 63 (29.1 bits)