BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= P51671
(97 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
1EOT-A nrPDB 153 1e-38
1DOL-A nrPDB 109 3e-25
1ESR-A nrPDB 105 6e-24
1NCV-A nrPDB 104 1e-23
2RA4-A nrPDB 95 7e-21
1EIG-A nrPDB 58 7e-10
2X6L-A nrPDB 58 9e-10
1G2S-A nrPDB 57 1e-09
4ZKB-B nrPDB 57 1e-09
4ZLT-F nrPDB 55 7e-09
2Q8R-E nrPDB 55 7e-09
2Q8T-A nrPDB 55 8e-09
1EQT-A nrPDB 55 1e-08
5YAM-A nrPDB 54 1e-08
1J9O-A nrPDB 53 2e-08
2VXW-A nrPDB 53 3e-08
5UIW-B nrPDB 53 4e-08
1ZXT-A nrPDB 50 2e-07
5EKI-A nrPDB 50 3e-07
5WB2-B nrPDB 49 5e-07
4XT3-B nrPDB 49 5e-07
2L4N-A nrPDB 49 7e-07
4OIK-A nrPDB 46 3e-06
1NR4-A nrPDB 46 4e-06
4MHE-A nrPDB 45 5e-06
5LTL-A nrPDB 45 9e-06
2HCC-A nrPDB 44 2e-05
1G91-A nrPDB 44 2e-05
4RWS-C nrPDB 41 1e-04
1HHV-A nrPDB 41 1e-04
1HA6-A nrPDB 41 1e-04
5L7M-A nrPDB 39 5e-04
2JYO-A nrPDB 37 0.002
5CBA-E nrPDB 35 0.011
2MP1-A nrPDB 33 0.027
4XDX-A nrPDB 31 0.097
5MQ0-T nrPDB 25 5.2
6EHZ-A nrPDB 25 6.2
4LMQ-D nrPDB 25 6.5
2K04-A nrPDB 25 6.9
5CHV-A nrPDB 25 8.8
4V4N-AS nrPDB 25 9.9
>1EOT-A nrPDB
Length = 74
Score = 153 bits (387), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/74 (100%), Positives = 74/74 (100%)
Query: 24 GPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQD 83
GPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQD
Sbjct: 1 GPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQD 60
Query: 84 SMKYLDQKSPTPKP 97
SMKYLDQKSPTPKP
Sbjct: 61 SMKYLDQKSPTPKP 74
>1DOL-A nrPDB
Length = 77
Score = 109 bits (272), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 60/70 (85%)
Query: 27 SVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMK 86
+ P TCC+N NRKI +QRL SYRRITS KCP++AVIFKT +AK+ICADPK+KWVQDSM
Sbjct: 7 NAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMD 66
Query: 87 YLDQKSPTPK 96
+LD+++ TPK
Sbjct: 67 HLDKQTQTPK 76
>1ESR-A nrPDB
Length = 76
Score = 105 bits (261), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 60/72 (83%)
Query: 26 ASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSM 85
S+P TCCFN+ NRKIP+QRLESY RIT+ +CP++AVIFKT+ K++CADPK++WV+DSM
Sbjct: 5 VSIPITCCFNVINRKIPIQRLESYTRITNIQCPKEAVIFKTQRGKEVCADPKERWVRDSM 64
Query: 86 KYLDQKSPTPKP 97
K+LDQ KP
Sbjct: 65 KHLDQIFQNLKP 76
>1NCV-A nrPDB
Length = 76
Score = 104 bits (259), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 57/70 (81%)
Query: 27 SVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMK 86
+ TTCC+ N+KIP QRLESYRR TS CP++AVIFKTKL K+ICADP +KWVQD MK
Sbjct: 6 NTSTTCCYRFINKKIPKQRLESYRRTTSSHCPREAVIFKTKLDKEICADPTQKWVQDFMK 65
Query: 87 YLDQKSPTPK 96
+LD+K+ TPK
Sbjct: 66 HLDKKTQTPK 75
>2RA4-A nrPDB
Length = 76
Score = 94.7 bits (234), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
Query: 27 SVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMK 86
+VP+TCCF +++KI LQRL+SY IT+ +CPQKAVIF+TKL K+ICADPK+KWVQ+ MK
Sbjct: 7 NVPSTCCFTFSSKKISLQRLKSYV-ITTSRCPQKAVIFRTKLGKEICADPKEKWVQNYMK 65
Query: 87 YLDQKSPTPK 96
+L +K+ T K
Sbjct: 66 HLGRKAHTLK 75
>1EIG-A nrPDB
Length = 73
Score = 58.2 bits (139), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 28 VPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKY 87
+P+ CC +++IP R+ SY+ + C + VIF TK + C DPK++WVQ MK
Sbjct: 3 IPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQSCGDPKQEWVQRYMKN 62
Query: 88 LD--QKSPTPK 96
LD QK +P+
Sbjct: 63 LDAKQKKASPR 73
>2X6L-A nrPDB
Length = 69
Score = 58.2 bits (139), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 29 PTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYL 88
PT CCF+ RK+P + Y TS C Q AV+F+TK +K +CADP + WVQ+ + L
Sbjct: 8 PTACCFSYTARKLPRNFVVDYYE-TSSLCSQPAVVFQTKRSKQVCADPSESWVQEYVYDL 66
Query: 89 D 89
+
Sbjct: 67 E 67
>1G2S-A nrPDB
Length = 71
Score = 57.4 bits (137), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 26 ASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSM 85
+ + TCCF +++ +P + SY TS C Q+AVIF TK K +C P+KKWVQ +
Sbjct: 4 SDISKTCCFQYSHKPLPWTWVRSYE-FTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQKYI 62
Query: 86 KYL 88
L
Sbjct: 63 SLL 65
>4ZKB-B nrPDB
Length = 75
Score = 57.4 bits (137), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 26 ASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSM 85
A PT CCF+ +R+IP + Y TS +C + VIF TK ++ +CADP ++WVQ +
Sbjct: 4 ADTPTACCFSYTSRQIPQNFIADYFE-TSSQCSKPGVIFLTKRSRQVCADPSEEWVQKYV 62
Query: 86 KYLD 89
L+
Sbjct: 63 SDLE 66
>4ZLT-F nrPDB
Length = 70
Score = 55.1 bits (131), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 26 ASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSM 85
A PT CCF+ + RKIP Q + +Y TS C Q VIF TK + ICAD K+ WVQ+ +
Sbjct: 6 ADTPTACCFSYS-RKIPRQFIVAYFE-TSSLCSQPGVIFLTKRNRQICADSKETWVQEYI 63
Query: 86 KYLD 89
L+
Sbjct: 64 TDLE 67
>2Q8R-E nrPDB
Length = 66
Score = 55.1 bits (131), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 24 GPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQD 83
GP P+ CCF KIP QR+ Y T+ +C + ++F TK +C +P KWVQD
Sbjct: 1 GPYH-PSECCFTYTTYKIPRQRIMDYYE-TNSQCSKPGIVFITKRGHSVCTNPSDKWVQD 58
Query: 84 SMK 86
+K
Sbjct: 59 YIK 61
>2Q8T-A nrPDB
Length = 74
Score = 54.7 bits (130), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 24 GPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQD 83
GP P+ CCF KIP QR+ Y T+ +C + ++F TK +C +P KWVQD
Sbjct: 9 GPYH-PSECCFTYTTYKIPRQRIMDYYE-TNSQCSKPGIVFITKRGHSVCTNPSDKWVQD 66
Query: 84 SMK 86
+K
Sbjct: 67 YIK 69
>1EQT-A nrPDB
Length = 68
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 24 GPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQD 83
G +S T CCF R +P ++ Y TSGKC AV+F T+ + +CA+P+KKWV++
Sbjct: 2 GYSSDTTPCCFAYIARPMPRAHIKEYF-YTSGKCSNPAVVFVTRKNRQVCANPEKKWVRE 60
Query: 84 SMKYLD 89
+ L+
Sbjct: 61 YINSLE 66
>5YAM-A nrPDB
Length = 69
Score = 53.9 bits (128), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 18 SPQGLAGPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPK 77
SP G S T CCF + +P ++ Y TS KC AV+F T+ + +CA+P+
Sbjct: 2 SPYG-----SDTTPCCFAYLSLALPRAHVKEYF-YTSSKCSNLAVVFVTRRNRQVCANPE 55
Query: 78 KKWVQDSMKYLD 89
KKWVQ+ + YL+
Sbjct: 56 KKWVQEYINYLE 67
>1J9O-A nrPDB
Length = 93
Score = 53.1 bits (126), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 33 CFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYLDQKS 92
C +L +++P+ R+++Y IT G +AVIF TK +CADP+ WV+D ++ +D+KS
Sbjct: 11 CVSLTTQRLPVSRIKTYT-ITEGSL--RAVIFITKRGLKVCADPQATWVRDVVRSMDRKS 67
Query: 93 PT 94
T
Sbjct: 68 NT 69
>2VXW-A nrPDB
Length = 69
Score = 52.8 bits (125), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 26 ASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSM 85
+S + CCF R +P ++ Y TSGKC AV+F T+ + +CA+P+KKWV++ +
Sbjct: 5 SSQSSACCFAYIARPLPRAHIKEYF-YTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYI 63
Query: 86 KYLD 89
L+
Sbjct: 64 NSLE 67
>5UIW-B nrPDB
Length = 75
Score = 52.8 bits (125), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 TCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYLD 89
+CCF R +P ++ Y TSGKC AV+F T+ + +CA+P+KKWV++ + L+
Sbjct: 10 SCCFAYIARPLPRAHIKEYF-YTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLE 67
>1ZXT-A nrPDB
Length = 76
Score = 49.7 bits (117), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 28 VPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKY 87
P +CC+ P+Q L+ + TS CP+ VI TK + ICADP K WV+ M+
Sbjct: 7 TPNSCCYGFQQHPPPVQILKEWYP-TSPACPKPGVILLTKRGRQICADPSKNWVRQLMQR 65
Query: 88 L 88
L
Sbjct: 66 L 66
>5EKI-A nrPDB
Length = 79
Score = 49.7 bits (117), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 32 CCFNLANRKIPLQRLESYRRIT-SGKCPQKAVIF--KTKLAKDICADPKKKWVQDSMKYL 88
CC + RKIP + + SYR+ S C A++F + + ++CADPK+ WVQ M++L
Sbjct: 8 CCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQHL 67
Query: 89 DQKSPTPK 96
D K+P+P+
Sbjct: 68 D-KTPSPQ 74
>5WB2-B nrPDB
Length = 76
Score = 48.9 bits (115), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 40 KIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYLDQKS 92
KIP+ L Y++ C ++A+I +T+ + CADPK++WV+D+M++LD+++
Sbjct: 18 KIPVALLIHYQQ-NQASCGKRAIILETRQHRLFCADPKEQWVKDAMQHLDRQA 69
>4XT3-B nrPDB
Length = 91
Score = 48.9 bits (115), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 40 KIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYLDQKS 92
KIP+ L Y++ C ++A+I +T+ + CADPK++WV+D+M++LD+++
Sbjct: 18 KIPVALLIHYQQ-NQASCGKRAIILETRQHRLFCADPKEQWVKDAMQHLDRQA 69
>2L4N-A nrPDB
Length = 113
Score = 48.5 bits (114), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 32 CCFNLANRKIPLQRLESYRRIT-SGKCPQKAVIF--KTKLAKDICADPKKKWVQDSMKYL 88
CC + RKIP + + SYR+ S C A++F + + ++CADPK+ WVQ M++L
Sbjct: 8 CCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQHL 67
Query: 89 DQKSPTPK 96
D K+P+P+
Sbjct: 68 D-KTPSPQ 74
>4OIK-A nrPDB
Length = 74
Score = 46.2 bits (108), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 30 TTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYLD 89
+ CCF+ A ++IPL+ + YR TS C + +IFK K K+ CA WVQ K L
Sbjct: 9 SRCCFSFAEQEIPLRAILCYRN-TSSICSNEGLIFKLKRGKEACALDTVGWVQRHRKMLR 67
Query: 90 Q 90
Sbjct: 68 H 68
>1NR4-A nrPDB
Length = 71
Score = 45.8 bits (107), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 23 AGPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQ 82
A +V CC IPL++L+++ + TS C + A++F T + IC+DP K V+
Sbjct: 1 ARGTNVGRECCLEYFKGAIPLRKLKTWYQ-TSEDCSRDAIVFVTVQGRAICSDPNNKRVK 59
Query: 83 DSMKYL 88
+++KYL
Sbjct: 60 NAVKYL 65
>4MHE-A nrPDB
Length = 70
Score = 45.4 bits (106), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 32 CCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQ 82
CC + +IP + + Y TS +CP+ VI TK + ICADP KKWVQ
Sbjct: 11 CCLVYTSWQIPQKFIVDYSE-TSPQCPKPGVILLTKRGRQICADPNKKWVQ 60
>5LTL-A nrPDB
Length = 100
Score = 44.7 bits (104), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 26 ASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSM 85
+ P+TCC + +P + + YR+ + P A+IF TK +++C +P WVQ+ +
Sbjct: 11 VNTPSTCCLKYYEKVLPRRLVVGYRKALNCHLP--AIIFVTKRNREVCTNPNDDWVQEYI 68
Query: 86 K 86
K
Sbjct: 69 K 69
>2HCC-A nrPDB
Length = 66
Score = 43.5 bits (101), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 32 CCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYL 88
CC + ++ IP ++SY TS +C + VIF TK + +CA P VQD MK L
Sbjct: 6 CCTSYISQSIPCSLMKSYFE-TSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 61
>1G91-A nrPDB
Length = 77
Score = 43.5 bits (101), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 32 CCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYL 88
CC + R IP LESY T+ +C + VIF TK + CA+P K VQ M+ L
Sbjct: 11 CCISYTPRSIPCSLLESYFE-TNSECSKPGVIFLTKKGRRFCANPSDKQVQVCMRML 66
>4RWS-C nrPDB
Length = 80
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 22 LAGPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWV 81
L P CC R +P L S+ TS C + VIF TK + +CAD K WV
Sbjct: 1 LGASCHRPDKCCLGYQKRPLPQVLLSSWYP-TSQLCSKPGVIFLTKRGRQVCADKSKDWV 59
Query: 82 QDSMKYL 88
+ M+ L
Sbjct: 60 KKLMQQL 66
>1HHV-A nrPDB
Length = 74
Score = 40.8 bits (94), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 29 PTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYL 88
P CC R +P L S+ TS C + VIF TK + +CAD K WV+ M+ L
Sbjct: 11 PDKCCLGYQKRPLPQVLLSSWY-PTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKLMQQL 69
>1HA6-A nrPDB
Length = 70
Score = 40.8 bits (94), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 32 CCFNLANRKIPLQRLESY-RRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYL 88
CC + +P + + + R++ C A+IF TK K +CADPK+ WV+ ++ L
Sbjct: 6 CCLSYIQTPLPSRAIVGFTRQMADEACDINAIIFHTKKRKSVCADPKQNWVKRAVNLL 63
>5L7M-A nrPDB
Length = 88
Score = 38.9 bits (89), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 57 CPQKAVIFKTKLAKDICADPKKKWVQDSMKYLDQKSPTPKP 97
CP+ V+ TK+ K IC +P+ KW+Q ++++ KS + P
Sbjct: 38 CPKTEVVIWTKMKKVICVNPRAKWLQRLLRHVQSKSLSSTP 78
>2JYO-A nrPDB
Length = 70
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 32 CCFNLANRKIPLQRLESY-RRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYLDQ 90
CC +R + + + + R++ + C A+IF TK +CA+PK+ WV+ ++ L +
Sbjct: 6 CCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVRLLSK 65
Query: 91 K 91
K
Sbjct: 66 K 66
>5CBA-E nrPDB
Length = 88
Score = 34.7 bits (78), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 57 CPQKAVIFKTKLAKDICADPKKKWVQDSMKYLDQKSPTPKP 97
CP+K +I K +C DP+ +W+Q M+ L ++S + P
Sbjct: 39 CPRKEIIVWKKNKSIVCVDPQAEWIQRMMEVLRKRSSSTLP 79
>2MP1-A nrPDB
Length = 77
Score = 33.1 bits (74), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 32 CCFNLANRKIP--LQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYLD 89
CC ++ + IP + R Y I G C AV+F T + +CA P + WV+ ++ L
Sbjct: 8 CCLSVTQKPIPGYIVRNFHYLLIKDG-CRVPAVVFTTLRGRQLCAPPDQPWVERIIQRLQ 66
Query: 90 QKS 92
+ S
Sbjct: 67 RTS 69
>4XDX-A nrPDB
Length = 70
Score = 31.2 bits (69), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 46 LESYRRITSG-KCPQKAVIFKTKLAKDICADPKKKWVQ 82
++ R I SG C +I K +++C DPK+ WVQ
Sbjct: 20 IKELRVIESGPHCANTEIIVKLSDGRELCLDPKENWVQ 57
>5MQ0-T nrPDB
Length = 877
Score = 25.4 bits (54), Expect = 5.2, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
Query: 47 ESYRRITSGKCPQKAVIFKTKLAK--------DICADPKKKWVQDSMKYLD 89
E + R +G P K + LAK D C D KK +Q +++Y D
Sbjct: 288 EEFMRQMNGIYPDKWLFLILSLAKYYISRGRLDSCGDLLKKSLQQTLRYSD 338
>6EHZ-A nrPDB
Length = 98
Score = 25.4 bits (54), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 70 KDICADPKKKWVQDSMK 86
+ +C DPK KW+Q+ ++
Sbjct: 47 RQVCIDPKLKWIQEYLE 63
>4LMQ-D nrPDB
Length = 61
Score = 25.4 bits (54), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 70 KDICADPKKKWVQDSMK 86
+ +C DPK KW+Q+ ++
Sbjct: 40 RQVCIDPKLKWIQEYLE 56
>2K04-A nrPDB
Length = 70
Score = 25.0 bits (53), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 70 KDICADPKKKWVQDSMK 86
+ +C DPK KW+Q+ ++
Sbjct: 49 RQVCIDPKLKWIQEYLE 65
>5CHV-A nrPDB
Length = 323
Score = 24.6 bits (52), Expect = 8.8, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 18 SPQGLAGPASVPTTCCFN 35
SP GL G ++ TCC N
Sbjct: 2 SPHGLVGLHNIGQTCCLN 19
>4V4N-AS nrPDB
Length = 150
Score = 24.6 bits (52), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 67 KLAKDICADPKKKWVQDSMKYLDQ----KSPTP 95
KLA ++C + + + D+++YLD K P P
Sbjct: 25 KLAVEVCRELRGMMLNDALRYLDDVIALKRPVP 57
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
1NCV-A nrPDB 105 5e-24
1EOT-A nrPDB 105 6e-24
1ESR-A nrPDB 103 2e-23
1DOL-A nrPDB 99 3e-22
2RA4-A nrPDB 95 7e-21
4ZKB-B nrPDB 93 2e-20
1EQT-A nrPDB 91 8e-20
4ZLT-F nrPDB 91 1e-19
2Q8R-E nrPDB 91 2e-19
2Q8T-A nrPDB 90 2e-19
2X6L-A nrPDB 90 3e-19
5YAM-A nrPDB 87 1e-18
2VXW-A nrPDB 87 2e-18
5UIW-B nrPDB 86 3e-18
1EIG-A nrPDB 86 4e-18
4RWS-C nrPDB 84 1e-17
1HHV-A nrPDB 84 1e-17
4MHE-A nrPDB 81 1e-16
5LTL-A nrPDB 81 1e-16
1G2S-A nrPDB 81 1e-16
1NR4-A nrPDB 80 2e-16
1G91-A nrPDB 79 3e-16
1ZXT-A nrPDB 78 7e-16
2JYO-A nrPDB 75 8e-15
2HCC-A nrPDB 74 1e-14
1HA6-A nrPDB 72 4e-14
4OIK-A nrPDB 72 4e-14
5EKI-A nrPDB 72 6e-14
1J9O-A nrPDB 71 2e-13
2L4N-A nrPDB 70 2e-13
4XT3-B nrPDB 69 5e-13
5WB2-B nrPDB 67 2e-12
5L7M-A nrPDB 56 3e-09
Sequences not found previously or not previously below threshold:
2MP1-A nrPDB 64 2e-11
4XDX-A nrPDB 49 3e-07
5CBA-E nrPDB 47 1e-06
6EHZ-A nrPDB 40 2e-04
1ROD-A nrPDB 38 9e-04
2K04-A nrPDB 37 0.002
6CWS-A nrPDB 37 0.003
4LMQ-D nrPDB 35 0.005
2N55-A nrPDB 35 0.005
4HCS-A nrPDB 34 0.011
2MGS-A nrPDB 33 0.026
1MI2-A nrPDB 32 0.063
1F9P-A nrPDB 32 0.078
2KUM-A nrPDB 31 0.10
1NAP-A nrPDB 31 0.14
1LV9-A nrPDB 30 0.18
1RJT-A nrPDB 30 0.18
1PLF-A nrPDB 30 0.19
1MSH-A nrPDB 30 0.28
2A6A-A nrPDB 28 1.1
5OB5-A nrPDB 27 1.3
2R3Z-A nrPDB 27 1.7
1PFN-A nrPDB 27 1.8
5CHV-A nrPDB 27 2.2
2ZZE-A nrPDB 27 2.8
1Y8C-A nrPDB 26 4.8
>1NCV-A nrPDB
Length = 76
Score = 105 bits (261), Expect = 5e-24, Method: Composition-based stats.
Identities = 47/72 (65%), Positives = 57/72 (79%)
Query: 25 PASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDS 84
+ TTCC+ N+KIP QRLESYRR TS CP++AVIFKTKL K+ICADP +KWVQD
Sbjct: 4 GINTSTTCCYRFINKKIPKQRLESYRRTTSSHCPREAVIFKTKLDKEICADPTQKWVQDF 63
Query: 85 MKYLDQKSPTPK 96
MK+LD+K+ TPK
Sbjct: 64 MKHLDKKTQTPK 75
>1EOT-A nrPDB
Length = 74
Score = 105 bits (261), Expect = 6e-24, Method: Composition-based stats.
Identities = 74/74 (100%), Positives = 74/74 (100%)
Query: 24 GPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQD 83
GPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQD
Sbjct: 1 GPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQD 60
Query: 84 SMKYLDQKSPTPKP 97
SMKYLDQKSPTPKP
Sbjct: 61 SMKYLDQKSPTPKP 74
>1ESR-A nrPDB
Length = 76
Score = 103 bits (256), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/73 (63%), Positives = 60/73 (82%)
Query: 25 PASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDS 84
S+P TCCFN+ NRKIP+QRLESY RIT+ +CP++AVIFKT+ K++CADPK++WV+DS
Sbjct: 4 SVSIPITCCFNVINRKIPIQRLESYTRITNIQCPKEAVIFKTQRGKEVCADPKERWVRDS 63
Query: 85 MKYLDQKSPTPKP 97
MK+LDQ KP
Sbjct: 64 MKHLDQIFQNLKP 76
>1DOL-A nrPDB
Length = 77
Score = 99.4 bits (246), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/70 (68%), Positives = 60/70 (85%)
Query: 27 SVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMK 86
+ P TCC+N NRKI +QRL SYRRITS KCP++AVIFKT +AK+ICADPK+KWVQDSM
Sbjct: 7 NAPVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQDSMD 66
Query: 87 YLDQKSPTPK 96
+LD+++ TPK
Sbjct: 67 HLDKQTQTPK 76
>2RA4-A nrPDB
Length = 76
Score = 94.8 bits (234), Expect = 7e-21, Method: Composition-based stats.
Identities = 44/70 (62%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
Query: 27 SVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMK 86
+VP+TCCF +++KI LQRL+SY IT+ +CPQKAVIF+TKL K+ICADPK+KWVQ+ MK
Sbjct: 7 NVPSTCCFTFSSKKISLQRLKSYV-ITTSRCPQKAVIFRTKLGKEICADPKEKWVQNYMK 65
Query: 87 YLDQKSPTPK 96
+L +K+ T K
Sbjct: 66 HLGRKAHTLK 75
>4ZKB-B nrPDB
Length = 75
Score = 93.2 bits (230), Expect = 2e-20, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 26 ASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSM 85
A PT CCF+ +R+IP + Y TS +C + VIF TK ++ +CADP ++WVQ +
Sbjct: 4 ADTPTACCFSYTSRQIPQNFIADYFE-TSSQCSKPGVIFLTKRSRQVCADPSEEWVQKYV 62
Query: 86 KYLD 89
L+
Sbjct: 63 SDLE 66
>1EQT-A nrPDB
Length = 68
Score = 91.3 bits (225), Expect = 8e-20, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 24 GPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQD 83
G +S T CCF R +P ++ Y TSGKC AV+F T+ + +CA+P+KKWV++
Sbjct: 2 GYSSDTTPCCFAYIARPMPRAHIKEYF-YTSGKCSNPAVVFVTRKNRQVCANPEKKWVRE 60
Query: 84 SMKYLD 89
+ L+
Sbjct: 61 YINSLE 66
>4ZLT-F nrPDB
Length = 70
Score = 90.9 bits (224), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 18 SPQGLAGPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPK 77
+P G A PT CCF+ +RKIP Q + +Y TS C Q VIF TK + ICAD K
Sbjct: 2 APYG----ADTPTACCFSY-SRKIPRQFIVAYFE-TSSLCSQPGVIFLTKRNRQICADSK 55
Query: 78 KKWVQDSMKYLD 89
+ WVQ+ + L+
Sbjct: 56 ETWVQEYITDLE 67
>2Q8R-E nrPDB
Length = 66
Score = 90.5 bits (223), Expect = 2e-19, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 24 GPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQD 83
GP P+ CCF KIP QR+ Y T+ +C + ++F TK +C +P KWVQD
Sbjct: 1 GPYH-PSECCFTYTTYKIPRQRIMDYYE-TNSQCSKPGIVFITKRGHSVCTNPSDKWVQD 58
Query: 84 SMKYLDQ 90
+K + +
Sbjct: 59 YIKDMKE 65
>2Q8T-A nrPDB
Length = 74
Score = 89.8 bits (221), Expect = 2e-19, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 24 GPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQD 83
GP P+ CCF KIP QR+ Y T+ +C + ++F TK +C +P KWVQD
Sbjct: 9 GPYH-PSECCFTYTTYKIPRQRIMDYYE-TNSQCSKPGIVFITKRGHSVCTNPSDKWVQD 66
Query: 84 SMKYLDQ 90
+K + +
Sbjct: 67 YIKDMKE 73
>2X6L-A nrPDB
Length = 69
Score = 89.8 bits (221), Expect = 3e-19, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 25 PASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDS 84
+ PT CCF+ RK+P + Y TS C Q AV+F+TK +K +CADP + WVQ+
Sbjct: 4 GSDPPTACCFSYTARKLPRNFVVDYYE-TSSLCSQPAVVFQTKRSKQVCADPSESWVQEY 62
Query: 85 MKYLD 89
+ L+
Sbjct: 63 VYDLE 67
>5YAM-A nrPDB
Length = 69
Score = 87.1 bits (214), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 18 SPQGLAGPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPK 77
SP G S T CCF + +P ++ Y TS KC AV+F T+ + +CA+P+
Sbjct: 2 SPYG-----SDTTPCCFAYLSLALPRAHVKEYF-YTSSKCSNLAVVFVTRRNRQVCANPE 55
Query: 78 KKWVQDSMKYLD 89
KKWVQ+ + YL+
Sbjct: 56 KKWVQEYINYLE 67
>2VXW-A nrPDB
Length = 69
Score = 86.7 bits (213), Expect = 2e-18, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 26 ASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSM 85
+S + CCF R +P ++ Y TSGKC AV+F T+ + +CA+P+KKWV++ +
Sbjct: 5 SSQSSACCFAYIARPLPRAHIKEYF-YTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYI 63
Query: 86 KYLD 89
L+
Sbjct: 64 NSLE 67
>5UIW-B nrPDB
Length = 75
Score = 86.3 bits (212), Expect = 3e-18, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 31 TCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYLD 89
+CCF R +P ++ Y TSGKC AV+F T+ + +CA+P+KKWV++ + L+
Sbjct: 10 SCCFAYIARPLPRAHIKEYF-YTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLE 67
>1EIG-A nrPDB
Length = 73
Score = 85.9 bits (211), Expect = 4e-18, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 28 VPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKY 87
+P+ CC +++IP R+ SY+ + C + VIF TK + C DPK++WVQ MK
Sbjct: 3 IPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQSCGDPKQEWVQRYMKN 62
Query: 88 LDQKSPTPKP 97
LD K P
Sbjct: 63 LDAKQKKASP 72
>4RWS-C nrPDB
Length = 80
Score = 84.4 bits (207), Expect = 1e-17, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 22 LAGPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWV 81
L P CC R +P L S+ TS C + VIF TK + +CAD K WV
Sbjct: 1 LGASCHRPDKCCLGYQKRPLPQVLLSSWYP-TSQLCSKPGVIFLTKRGRQVCADKSKDWV 59
Query: 82 QDSMKYL 88
+ M+ L
Sbjct: 60 KKLMQQL 66
>1HHV-A nrPDB
Length = 74
Score = 84.0 bits (206), Expect = 1e-17, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 22 LAGPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWV 81
L P CC R +P L S+ TS C + VIF TK + +CAD K WV
Sbjct: 4 LGASWHRPDKCCLGYQKRPLPQVLLSSWYP-TSQLCSKPGVIFLTKRGRQVCADKSKDWV 62
Query: 82 QDSMKYL 88
+ M+ L
Sbjct: 63 KKLMQQL 69
>4MHE-A nrPDB
Length = 70
Score = 80.9 bits (198), Expect = 1e-16, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 32 CCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYL 88
CC + +IP + + Y TS +CP+ VI TK + ICADP KKWVQ + L
Sbjct: 11 CCLVYTSWQIPQKFIVDYSE-TSPQCPKPGVILLTKRGRQICADPNKKWVQKYISDL 66
>5LTL-A nrPDB
Length = 100
Score = 80.5 bits (197), Expect = 1e-16, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 26 ASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSM 85
+ P+TCC + +P + + YR+ + C A+IF TK +++C +P WVQ+ +
Sbjct: 11 VNTPSTCCLKYYEKVLPRRLVVGYRKALN--CHLPAIIFVTKRNREVCTNPNDDWVQEYI 68
Query: 86 KY 87
K
Sbjct: 69 KD 70
>1G2S-A nrPDB
Length = 71
Score = 80.5 bits (197), Expect = 1e-16, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 24 GPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQD 83
+ + TCCF +++ +P + SY TS C Q+AVIF TK K +C P+KKWVQ
Sbjct: 2 RGSDISKTCCFQYSHKPLPWTWVRSY-EFTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQK 60
Query: 84 SMKYLDQKSP 93
+ L
Sbjct: 61 YISLLKTPKQ 70
>1NR4-A nrPDB
Length = 71
Score = 79.8 bits (195), Expect = 2e-16, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 23 AGPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQ 82
A +V CC IPL++L+++ + TS C + A++F T + IC+DP K V+
Sbjct: 1 ARGTNVGRECCLEYFKGAIPLRKLKTWYQ-TSEDCSRDAIVFVTVQGRAICSDPNNKRVK 59
Query: 83 DSMKYLDQ 90
+++KYL
Sbjct: 60 NAVKYLQS 67
>1G91-A nrPDB
Length = 77
Score = 79.4 bits (194), Expect = 3e-16, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 28 VPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKY 87
CC + R IP LESY T+ +C + VIF TK + CA+P K VQ M+
Sbjct: 7 TSADCCISYTPRSIPCSLLESYFE-TNSECSKPGVIFLTKKGRRFCANPSDKQVQVCMRM 65
Query: 88 L 88
L
Sbjct: 66 L 66
>1ZXT-A nrPDB
Length = 76
Score = 78.2 bits (191), Expect = 7e-16, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 26 ASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSM 85
+ P +CC+ P+Q L+ + TS CP+ VI TK + ICADP K WV+ M
Sbjct: 5 SYTPNSCCYGFQQHPPPVQILKEWYP-TSPACPKPGVILLTKRGRQICADPSKNWVRQLM 63
Query: 86 KYL 88
+ L
Sbjct: 64 QRL 66
>2JYO-A nrPDB
Length = 70
Score = 74.8 bits (182), Expect = 8e-15, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 32 CCFNLANRKIPLQRLESY-RRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYLDQ 90
CC +R + + + + R++ + C A+IF TK +CA+PK+ WV+ ++ L +
Sbjct: 6 CCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVRLLSK 65
Query: 91 KSPT 94
K
Sbjct: 66 KVKN 69
>2HCC-A nrPDB
Length = 66
Score = 74.0 bits (180), Expect = 1e-14, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 32 CCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYL 88
CC + ++ IP ++SY TS +C + VIF TK + +CA P VQD MK L
Sbjct: 6 CCTSYISQSIPCSLMKSYFE-TSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 61
>1HA6-A nrPDB
Length = 70
Score = 72.4 bits (176), Expect = 4e-14, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 32 CCFNLANRKIPLQRLESY-RRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYLD 89
CC + +P + + + R++ C A+IF TK K +CADPK+ WV+ ++ L
Sbjct: 6 CCLSYIQTPLPSRAIVGFTRQMADEACDINAIIFHTKKRKSVCADPKQNWVKRAVNLLS 64
>4OIK-A nrPDB
Length = 74
Score = 72.4 bits (176), Expect = 4e-14, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 30 TTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYLD 89
+ CCF+ A ++IPL+ + YR TS C + +IFK K K+ CA WVQ K L
Sbjct: 9 SRCCFSFAEQEIPLRAILCYRN-TSSICSNEGLIFKLKRGKEACALDTVGWVQRHRKMLR 67
Query: 90 Q 90
Sbjct: 68 H 68
>5EKI-A nrPDB
Length = 79
Score = 72.1 bits (175), Expect = 6e-14, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 32 CCFNLANRKIPLQRLESYRRIT-SGKCPQKAVIFKTKL--AKDICADPKKKWVQDSMKYL 88
CC + RKIP + + SYR+ S C A++F + ++CADPK+ WVQ M++L
Sbjct: 8 CCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQHL 67
Query: 89 DQKSPTPK 96
D K+P+P+
Sbjct: 68 D-KTPSPQ 74
>1J9O-A nrPDB
Length = 93
Score = 70.5 bits (171), Expect = 2e-13, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 33 CFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYLDQKS 92
C +L +++P+ R+++Y T + +AVIF TK +CADP+ WV+D ++ +D+KS
Sbjct: 11 CVSLTTQRLPVSRIKTY---TITEGSLRAVIFITKRGLKVCADPQATWVRDVVRSMDRKS 67
Query: 93 PT 94
T
Sbjct: 68 NT 69
>2L4N-A nrPDB
Length = 113
Score = 70.1 bits (170), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 32 CCFNLANRKIPLQRLESYRRIT-SGKCPQKAVIFKTKL--AKDICADPKKKWVQDSMKYL 88
CC + RKIP + + SYR+ S C A++F + ++CADPK+ WVQ M++L
Sbjct: 8 CCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQHL 67
Query: 89 DQKSPTPK 96
D K+P+P+
Sbjct: 68 D-KTPSPQ 74
>4XT3-B nrPDB
Length = 91
Score = 69.0 bits (167), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 30 TTC---CFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMK 86
T C C + + KIP+ L Y++ C ++A+I +T+ + CADPK++WV+D+M+
Sbjct: 6 TKCNITCSKMTS-KIPVALLIHYQQ-NQASCGKRAIILETRQHRLFCADPKEQWVKDAMQ 63
Query: 87 YLDQKSPTPK 96
+LD+++
Sbjct: 64 HLDRQAAALT 73
>5WB2-B nrPDB
Length = 76
Score = 66.7 bits (161), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 40 KIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYLDQKSPTPK 96
KIP+ L Y++ C ++A+I +T+ + CADPK++WV+D+M++LD+++
Sbjct: 18 KIPVALLIHYQQ-NQASCGKRAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALT 73
>2MP1-A nrPDB
Length = 77
Score = 63.6 bits (153), Expect = 2e-11, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 25 PASVPTTCCFNLANRKIPLQRLESY-RRITSGKCPQKAVIFKTKLAKDICADPKKKWVQD 83
+ CC ++ + IP + ++ + C AV+F T + +CA P + WV+
Sbjct: 1 GTNDAEDCCLSVTQKPIPGYIVRNFHYLLIKDGCRVPAVVFTTLRGRQLCAPPDQPWVER 60
Query: 84 SMKYLDQKSPTPK 96
++ L + S K
Sbjct: 61 IIQRLQRTSAKMK 73
>5L7M-A nrPDB
Length = 88
Score = 56.3 bits (134), Expect = 3e-09, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 55 GKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYLDQKSPTPKP 97
CP+ V+ TK+ K IC +P+ KW+Q ++++ KS + P
Sbjct: 36 NGCPKTEVVIWTKMKKVICVNPRAKWLQRLLRHVQSKSLSSTP 78
>4XDX-A nrPDB
Length = 70
Score = 49.3 bits (116), Expect = 3e-07, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 33 CFNLANRKIPLQRLESYRRITSG-KCPQKAVIFKTKLAKDICADPKKKWVQDSMKYLDQK 91
C ++ + ++ R I SG C +I K +++C DPK+ WVQ ++ ++
Sbjct: 7 CIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPKENWVQRVVEKFLKR 66
Query: 92 SPTP 95
+
Sbjct: 67 AENS 70
>5CBA-E nrPDB
Length = 88
Score = 47.4 bits (111), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 28 VPTTC-CFNLANRKIPLQRLESYRRITSG-KCPQKAVIFKTKLAKDICADPKKKWVQDSM 85
C C ++ IP + ++ + + G CP+K +I K +C DP+ +W+Q M
Sbjct: 8 TSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIVWKKNKSIVCVDPQAEWIQRMM 67
Query: 86 KYLDQKSPTPKP 97
+ L ++S + P
Sbjct: 68 EVLRKRSSSTLP 79
>6EHZ-A nrPDB
Length = 98
Score = 40.1 bits (92), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 26/62 (41%)
Query: 25 PASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDS 84
P S+ C I ++ + + + C + V + +C DPK KW+Q+
Sbjct: 2 PVSLSYRCPCRFFESHIARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEY 61
Query: 85 MK 86
++
Sbjct: 62 LE 63
>1ROD-A nrPDB
Length = 72
Score = 38.2 bits (87), Expect = 9e-04, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 33 CFNLANRKIPLQRLESYRRITSG-KCPQKAVIFKTKLAKDICADPKKKWVQDSMKYL 88
C ++ + ++ R I SG C +I K +++C DP V+ ++ +
Sbjct: 9 CIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPASPIVKKIIEKM 65
>2K04-A nrPDB
Length = 70
Score = 36.6 bits (83), Expect = 0.002, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 26/62 (41%)
Query: 25 PASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDS 84
P S+ C + ++ + + + C + V + +C DPK KW+Q+
Sbjct: 4 PVSLSYRCPCRFFESHVARANVKHLKILNTPNCACQIVARLKNNNRQVCIDPKLKWIQEY 63
Query: 85 MK 86
++
Sbjct: 64 LE 65
>6CWS-A nrPDB
Length = 108
Score = 36.6 bits (83), Expect = 0.003, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Query: 28 VPTTCCFN---LANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDS 84
+ ++CC +R++ + + G C AVI K + IC P V+
Sbjct: 7 IASSCCTEVSHHISRRLLERVNMCRIQRADGDCDLAAVILHVKR-RRICVSPHNHTVKQW 65
Query: 85 MKYLDQKSP 93
MK K
Sbjct: 66 MKVQAAKKN 74
>4LMQ-D nrPDB
Length = 61
Score = 35.5 bits (80), Expect = 0.005, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 23/56 (41%)
Query: 31 TCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMK 86
C + ++ + + + C + V + +C DPK KW+Q+ ++
Sbjct: 1 RCPCRFFESHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKLKWIQEYLE 56
>2N55-A nrPDB
Length = 70
Score = 35.5 bits (80), Expect = 0.005, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 25/62 (40%)
Query: 25 PASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDS 84
P S+ C + ++ + + + C + V + +C DPK KW Q+
Sbjct: 4 PVSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIVARLKNNNRQVCIDPKCKWCQEY 63
Query: 85 MK 86
++
Sbjct: 64 LE 65
>4HCS-A nrPDB
Length = 81
Score = 34.3 bits (77), Expect = 0.011, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 33 CFNLANRKIPLQRLE-SYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYLDQK 91
CF + K P ++ Y + C + V+F + C DP W+ + + L +K
Sbjct: 15 CFKVLTTKEPKANIKRCYNLPKTNNCLK-CVLFVDASNRMKCIDPNASWLAERLYRLKEK 73
Query: 92 SPTPK 96
T +
Sbjct: 74 GVTCR 78
>2MGS-A nrPDB
Length = 78
Score = 33.1 bits (74), Expect = 0.026, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Query: 21 GLAGPASVPTTC-CFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKK 79
G A C C P +C + V+ K K+IC DP+
Sbjct: 2 GPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAP 61
Query: 80 WVQDSMKYL 88
+++ ++ +
Sbjct: 62 FLKKVIQKI 70
>1MI2-A nrPDB
Length = 73
Score = 32.0 bits (71), Expect = 0.063, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 55 GKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYLDQK 91
C Q VI K + +C DP+ VQ ++ + K
Sbjct: 33 PHCAQTEVIATLKGGQKVCLDPEAPLVQKIIQKILNK 69
>1F9P-A nrPDB
Length = 85
Score = 31.6 bits (70), Expect = 0.078, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 56 KCPQKAVIFKTKLAKDICADPKKKWVQDSMK 86
C Q VI K + IC DP ++ ++
Sbjct: 45 HCNQVEVIATLKDGRKICLDPDAPRIKKIVQ 75
>2KUM-A nrPDB
Length = 88
Score = 31.2 bits (69), Expect = 0.10, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 27/73 (36%), Gaps = 5/73 (6%)
Query: 29 PTTCCFNLANRKIPLQRLESYRRI----TSGKCPQKAVIFKTKLAKDICADPKKKWVQDS 84
T CC L + + + L ++ G C +A + + IC P+ +
Sbjct: 6 STACCTQLYRKPLSDKLLRKVIQVELQEADGDCHLQAFVLHLAQ-RSICIHPQNPSLSQW 64
Query: 85 MKYLDQKSPTPKP 97
++ ++K P
Sbjct: 65 FEHQERKLHGTLP 77
>1NAP-A nrPDB
Length = 70
Score = 30.8 bits (68), Expect = 0.14, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 56 KCPQKAVIFKTKLAKDICADPKKKWVQDSMK 86
C Q VI K + IC DP ++ ++
Sbjct: 30 HCNQVEVIATLKDGRKICLDPDAPRIKKIVQ 60
>1LV9-A nrPDB
Length = 77
Score = 30.5 bits (67), Expect = 0.18, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Query: 25 PASVPTTC-CFNLANRKI-PLQRLESYRRITSGKCPQKAVIFK-TKLAKDICADPKKKWV 81
P S C C +++N+ + P + S CP+ +I K + C +P+ K +
Sbjct: 2 PLSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPESKAI 61
Query: 82 QDSMKYLDQKSPTPKP 97
++ +K + ++ P
Sbjct: 62 KNLLKAVSKEMSKRSP 77
>1RJT-A nrPDB
Length = 73
Score = 30.5 bits (67), Expect = 0.18, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 54 SGKCPQKAVIFKTKLAK-DICADPKKKWVQDSMKYLDQK 91
S C + VI K K C +PK K + +K +++K
Sbjct: 33 SNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKKVERK 71
>1PLF-A nrPDB
Length = 72
Score = 30.5 bits (67), Expect = 0.19, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 19/66 (28%), Gaps = 1/66 (1%)
Query: 24 GPASVPTTC-CFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQ 82
G C C + P CP +I K + IC D + +
Sbjct: 4 GGEDEDLQCVCLKTTSGINPRHISSLEVIGAGLHCPSPQLIATLKTGRKICLDQQNPLYK 63
Query: 83 DSMKYL 88
+K L
Sbjct: 64 KIIKRL 69
>1MSH-A nrPDB
Length = 72
Score = 29.7 bits (65), Expect = 0.28, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 17/56 (30%)
Query: 33 CFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYL 88
C P + C Q VI K + C +P V+ ++ +
Sbjct: 11 CLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVKKIIEKM 66
>2A6A-A nrPDB
Length = 218
Score = 27.8 bits (60), Expect = 1.1, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Query: 41 IPLQRLESYRRITSGKCPQKAVIFKTKLAKD---ICA 74
IP+ L S +T+ CP V+ + A+ CA
Sbjct: 98 IPVAPLNS-FEMTAKSCPADGVVLVARRARKGYHYCA 133
>5OB5-A nrPDB
Length = 63
Score = 27.4 bits (59), Expect = 1.3, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 55 GKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYL 88
C Q VI K + C +P V+ ++ +
Sbjct: 28 PHCAQTEVIATLKNGQKACLNPASPMVKKIIEKM 61
>2R3Z-A nrPDB
Length = 68
Score = 27.4 bits (59), Expect = 1.7, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 52 ITSGKCPQKAVIFKTKLA-KDICADPKKKWVQDSMK 86
S CP+ +I K + C +P+ K +++ MK
Sbjct: 31 PASLSCPRVEIIATMKKNDEQRCLNPESKTIKNLMK 66
>1PFN-A nrPDB
Length = 68
Score = 27.0 bits (58), Expect = 1.8, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 18/56 (32%)
Query: 33 CFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWVQDSMKYL 88
C ++ P CP +I K + IC D + + +K L
Sbjct: 10 CVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKIIKKL 65
>5CHV-A nrPDB
Length = 323
Score = 26.6 bits (57), Expect = 2.2, Method: Composition-based stats.
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 18 SPQGLAGPASVPTTCCFN 35
SP GL G ++ TCC N
Sbjct: 2 SPHGLVGLHNIGQTCCLN 19
>2ZZE-A nrPDB
Length = 752
Score = 26.6 bits (57), Expect = 2.8, Method: Composition-based stats.
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 9 WLLLIAAAFSPQGLAGPASVP 29
W++L A AF P+G P
Sbjct: 540 WVILDATAFYPEGGGQPYDTG 560
>1Y8C-A nrPDB
Length = 246
Score = 25.8 bits (55), Expect = 4.8, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 31 TCCFNLANRKIPLQRLESYRRITSGKCPQKAV-IF 64
TCC + N I L+ Y + S + V IF
Sbjct: 106 TCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF 140
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.310 0.131 0.414
Lambda K H
0.267 0.0395 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,753,387
Number of Sequences: 36641
Number of extensions: 121044
Number of successful extensions: 393
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 254
Number of HSP's gapped (non-prelim): 105
length of query: 97
length of database: 10,336,785
effective HSP length: 65
effective length of query: 32
effective length of database: 7,955,120
effective search space: 254563840
effective search space used: 254563840
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 52 (24.7 bits)