BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P50874 (479 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5V8F-E nrPDB 989 0.0 4XGC-E nrPDB 67 1e-11 5UJM-E nrPDB 64 2e-10 5UJ7-E nrPDB 43 3e-04 3PEW-A nrPDB 34 0.13 3FHO-A nrPDB 33 0.21 2KBE-A nrPDB 33 0.30 6MFU-A nrPDB 33 0.38 3EIQ-A nrPDB 30 1.9 5ZBZ-A nrPDB 30 2.0 5U0S-N nrPDB 30 2.5 >5V8F-E nrPDB Length = 479 Score = 989 bits (2557), Expect = 0.0, Method: Compositional matrix adjust. Identities = 479/479 (100%), Positives = 479/479 (100%) Query: 1 MNVTTPEVAFREYQTNCLASYISADPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAV 60 MNVTTPEVAFREYQTNCLASYISADPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAV Sbjct: 1 MNVTTPEVAFREYQTNCLASYISADPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAV 60 Query: 61 WLEPVELVSWKPLLQAIARTVQYKLKTLYPNIPTTDYDPLQVEEPFLLVKTLHNIFVQYE 120 WLEPVELVSWKPLLQAIARTVQYKLKTLYPNIPTTDYDPLQVEEPFLLVKTLHNIFVQYE Sbjct: 61 WLEPVELVSWKPLLQAIARTVQYKLKTLYPNIPTTDYDPLQVEEPFLLVKTLHNIFVQYE 120 Query: 121 SLQEKTCLFLILDGFDSLQDLDAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQRYS 180 SLQEKTCLFLILDGFDSLQDLDAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQRYS Sbjct: 121 SLQEKTCLFLILDGFDSLQDLDAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQRYS 180 Query: 181 THCIPTVMFPRYNVDEVSTILVMSRCGELMEDSCLRKRIIEEQITDCTDDQFQNVAANFI 240 THCIPTVMFPRYNVDEVSTILVMSRCGELMEDSCLRKRIIEEQITDCTDDQFQNVAANFI Sbjct: 181 THCIPTVMFPRYNVDEVSTILVMSRCGELMEDSCLRKRIIEEQITDCTDDQFQNVAANFI 240 Query: 241 HLIVQAFHSYTGNDIFALNDLIDFKWPKYVSRITKENIFEPLALYKSAIKLFLSTDDNLS 300 HLIVQAFHSYTGNDIFALNDLIDFKWPKYVSRITKENIFEPLALYKSAIKLFLSTDDNLS Sbjct: 241 HLIVQAFHSYTGNDIFALNDLIDFKWPKYVSRITKENIFEPLALYKSAIKLFLSTDDNLS 300 Query: 301 ENGQGESAITTNRDDLENSQTYDLSIISKYLLIASYICSYLEPRYDASIFSRKTRIIQGR 360 ENGQGESAITTNRDDLENSQTYDLSIISKYLLIASYICSYLEPRYDASIFSRKTRIIQGR Sbjct: 301 ENGQGESAITTNRDDLENSQTYDLSIISKYLLIASYICSYLEPRYDASIFSRKTRIIQGR 360 Query: 361 AAYGRRKKKEVNPRYLQPSLFAIERLLAIFQAIFPIQGKAESGSLSALREESLMKANIEV 420 AAYGRRKKKEVNPRYLQPSLFAIERLLAIFQAIFPIQGKAESGSLSALREESLMKANIEV Sbjct: 361 AAYGRRKKKEVNPRYLQPSLFAIERLLAIFQAIFPIQGKAESGSLSALREESLMKANIEV 420 Query: 421 FQNLSELHTLKLIATTMNKNIDYLSPKVRWKVNVPWEIIKEISESVHFNISDYFSDIHE 479 FQNLSELHTLKLIATTMNKNIDYLSPKVRWKVNVPWEIIKEISESVHFNISDYFSDIHE Sbjct: 421 FQNLSELHTLKLIATTMNKNIDYLSPKVRWKVNVPWEIIKEISESVHFNISDYFSDIHE 479 >4XGC-E nrPDB Length = 460 Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 112/492 (22%), Positives = 196/492 (39%), Gaps = 64/492 (13%) Query: 6 PEVAFREYQTNCLASYISADPDITPSNLILQGYSGTGKTYTLKKYF---NANPNLHAVWL 62 P RE L I + PS + L G+SGTGKT + + N+ L Sbjct: 10 PLFPCREAAIETLGELIGDSSETYPSAIYLFGHSGTGKTALTRAFLKECGKRQNVRTAHL 69 Query: 63 EPVELVSWKPLLQAIARTVQYKLKTLYPNIPTTDYDPLQVEEPFLLVKTLHNIFVQYESL 122 +E + K +L+ + L +L P+ D L+V+ V+ L Q + Sbjct: 70 NAIECYTTKIMLEIL-------LDSLAPD----QGDALKVDNMLDFVEQLRR---QAATR 115 Query: 123 QEKTCLFLILDGFDSLQDLDAALFNKYIKLNELLPKDSKINIKFIYTMLET----SFLQR 178 E + +D + L+D+DA + ++L EL N+ +L F + Sbjct: 116 VEDQGFLIAVDNAERLRDMDANVLPVLLRLQEL------TNLNLCVILLSQLPFEKFYNK 169 Query: 179 YSTHCIPTVMFPRYNVDEVSTIL---VMSRCGELMEDSCLRKRIIEEQITDCTDDQFQNV 235 I + +YN E IL +L+E K+ +E T+D + N Sbjct: 170 TGLSEIVCLHLAQYNKAETQRILGSDFQQVRNQLLEQFAQDKKRLEICQEAVTEDFYNNY 229 Query: 236 AANFIHLIVQAFHSYTGNDIFALNDLIDFKWPKY--------VSRITKENIFEPLALYKS 287 F+ + +A + A L + P +SR+ + +I PL +S Sbjct: 230 LNLFLSVFYKACRDVPELQLTARKCLSTYLEPVLDGTVDATDISRLWR-HIAGPL---RS 285 Query: 288 AIKLFLSTDDNLSENGQGESAITTNRDDLENSQTYDLSIISKYLLIASYICSYLEPRYDA 347 A+ + +E + +AI ++ + +Q+ +L +K+LLIA+++ S+ + D Sbjct: 286 ALTQIYMRIEKPAEEVEDFTAI-EDQSVRKLAQSLELPYYAKFLLIAAFLASHNAAKQDK 344 Query: 348 SIFSRKTRIIQGR--AAYGRRKKKEVNPRYLQPSLFAIERLLAIFQAIFPIQGKAESGSL 405 +F + + R R K E L P F+I+RLLAIF AI Sbjct: 345 RLFVKHHGKQRKRMQTVNARAKTTEKMSTTLGPKSFSIDRLLAIFYAI------------ 392 Query: 406 SALREESLMKANIEVFQNLSELHTLKLIA-TTMNKNIDYLSPKVRWKVNVPWEIIKEISE 464 L E+ + N+ +S L L L++ + +NI + R + + E + +I + Sbjct: 393 --LEEKVGLTCNL--LSQISTLVHLNLLSFVSGEQNI--MEGSARLQCTIGLEFVLQIGK 446 Query: 465 SVHFNISDYFSD 476 V FN+ Y D Sbjct: 447 VVGFNVRQYLCD 458 >5UJM-E nrPDB Length = 435 Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 110/491 (22%), Positives = 198/491 (40%), Gaps = 87/491 (17%) Query: 8 VAFREYQTNCLASYISADPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAVWLEPVEL 67 V RE Q + L S + ++ + G++ +GKTY + L V++ VE Sbjct: 8 VLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKT-LELPHVFVNCVEC 66 Query: 68 VSWKPLLQAIARTVQYKLKTLYPNIPTTDYDPLQVE---EPFLLVKTLHNIFVQYESLQE 124 + + LL+ I + N ++ D E E F L E+L++ Sbjct: 67 FTLRLLLEQILNKL---------NHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKD 117 Query: 125 KTCLFLILDGFDSLQDLDAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQRYSTHCI 184 +T ++++LD + L+D++A L +++L EL D + + F+ ++ F R +T C Sbjct: 118 QT-VYIVLDKAEYLRDMEANLLPGFLRLQEL--ADRNVTVLFLSEIVWEKF--RPNTGCF 172 Query: 185 -PTVM-FPRYNVDEVSTILVMSRCGELMEDSCLRKRIIEEQITDCTDDQFQNVAANFIHL 242 P V+ FP Y++ + IL E D A +I++ Sbjct: 173 EPFVLYFPDYSIGNLQKILSHDHPPEYSAD----------------------FYAAYINI 210 Query: 243 IVQAFHSYTGNDIFALNDLIDFKWPKYVSRITKENIFEPLALYKSAIKLFLSTDDNLSEN 302 ++ F++ D+ L L +PKY + K E + KL+ + + +L + Sbjct: 211 LLGVFYT-VCRDLKELRHLAVLNFPKYCEPVVKGEASE-----RDTRKLWRNIEPHLKKA 264 Query: 303 GQ--------GESAITTNRDDLENSQTYDLSI--------ISKYLLIASYICSYLEPRYD 346 Q +DD + Q LS SK++LIA+Y+ SY R D Sbjct: 265 MQTVYLREISSSQWEKLQKDDTDPGQLKGLSAHTHVELPYYSKFILIAAYLASYNPARTD 324 Query: 347 ASIFSRKTRIIQGRAAYGRRKKKEVNPRYLQPSLFAIERLLAIFQAIFPIQGKAESGSLS 406 F + I+ + + ++ +K N L P F ++RLLAI +I Sbjct: 325 KRFFLKHHGKIK-KTNFLKKHEKTSN-HLLGPKPFPLDRLLAILYSIV------------ 370 Query: 407 ALREESLMKANIEVFQNL-SELHTLKLIATTMNKNIDYLSPKVRWKVNVPWEIIKEISES 465 +S + +F + S + L + +D PK +K V + I+ I+ + Sbjct: 371 ----DSRVAPTANIFSQITSLVTLQLLTLVGHDDQLD--GPK--YKCTVSLDFIRAIART 422 Query: 466 VHFNISDYFSD 476 V+F+I Y D Sbjct: 423 VNFDIIKYLYD 433 >5UJ7-E nrPDB Length = 284 Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 61/273 (22%), Positives = 113/273 (41%), Gaps = 43/273 (15%) Query: 8 VAFREYQTNCLASYISADPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAVWLEPVEL 67 V RE Q + L S + ++ + G++ +GKTY + L V++ VE Sbjct: 8 VLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKT-LELPHVFVNCVEC 66 Query: 68 VSWKPLLQAIARTVQYKLKTLYPNIPTTDYDPLQVE---EPFLLVKTLHNIFVQYESLQE 124 + + LL+ I + N ++ D E E F L E+L++ Sbjct: 67 FTLRLLLEQILNKL---------NHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKD 117 Query: 125 KTCLFLILDGFDSLQDLDAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQRYSTHCI 184 +T ++++LD + L+D++A L +++L EL D + + F+ ++ F R +T C Sbjct: 118 QT-VYIVLDKAEYLRDMEANLLPGFLRLQEL--ADRNVTVLFLSEIVWEKF--RPNTGCF 172 Query: 185 -PTVM-FPRYNVDEVSTILVMSRCGELMEDSCLRKRIIEEQITDCTDDQFQNVAANFIHL 242 P V+ FP Y++ + IL E D A +I++ Sbjct: 173 EPFVLYFPDYSIGNLQKILSHDHPPEYSAD----------------------FYAAYINI 210 Query: 243 IVQAFHSYTGNDIFALNDLIDFKWPKYVSRITK 275 ++ F++ D+ L L +PKY + K Sbjct: 211 LLGVFYT-VCRDLKELRHLAVLNFPKYCEPVVK 242 >3PEW-A nrPDB Length = 395 Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust. Identities = 36/178 (20%), Positives = 82/178 (46%), Gaps = 17/178 (9%) Query: 30 PSNLILQGYSGTGKT--YTLKKYFNANP---NLHAVWLEPVELVSWKPL--LQAIARTVQ 82 P N+I Q SGTGKT ++L NP + A+ L P ++ + L +Q + + + Sbjct: 44 PRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFTK 103 Query: 83 YKLKTLYPNIPTTDYDPLQVEEPFLLVKTLHNI--FVQYESLQEKTCLFLILDGFDSLQD 140 + + P+ ++ + ++V T + ++ + +Q + +LD D++ D Sbjct: 104 ITSQLIVPD----SFEKNKQINAQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLD 159 Query: 141 LDAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQRYSTHCIPTVMFPRYNVDEVS 198 L ++ I++ LPKD+++ +++ +++Y+ +P +EV+ Sbjct: 160 -QQGLGDQCIRVKRFLPKDTQL---VLFSATFADAVRQYAKKIVPNANTLELQTNEVN 213 >3FHO-A nrPDB Length = 508 Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust. Identities = 36/180 (20%), Positives = 81/180 (45%), Gaps = 21/180 (11%) Query: 30 PSNLILQGYSGTGKTYT-----LKKYFNANPNLHAVWLEPVELVSWKPLLQAIARTVQY- 83 P N+I Q SGTGKT L + + P A+ L P ++ + ++ + +Y Sbjct: 158 PRNMIGQSQSGTGKTAAFALTMLSRVDASVPKPQAICLAPSRELA-RQIMDVVTEMGKYT 216 Query: 84 KLKTLYP---NIPTTDYDPLQVEEPFLLVKTLHNI--FVQYESLQEKTCLFLILDGFDSL 138 ++KT + ++P Q+ ++ T + ++ L + +LD D++ Sbjct: 217 EVKTAFGIKDSVPKGAKIDAQI-----VIGTPGTVMDLMKRRQLDARDIKVFVLDEADNM 271 Query: 139 QDLDAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQRYSTHCIPTVMFPRYNVDEVS 198 D L ++ +++ LLP++++I +++ + +++Y+ P R +E+S Sbjct: 272 LD-QQGLGDQSMRIKHLLPRNTQI---VLFSATFSERVEKYAERFAPNANEIRLKTEELS 327 >2KBE-A nrPDB Length = 226 Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust. Identities = 34/165 (20%), Positives = 78/165 (47%), Gaps = 17/165 (10%) Query: 30 PSNLILQGYSGTGKT--YTLKKYFNANP---NLHAVWLEPVELVSWKPL--LQAIARTVQ 82 P N+I Q SGTGKT ++L NP + A+ L P ++ + L +Q + + + Sbjct: 61 PRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFTK 120 Query: 83 YKLKTLYPNIPTTDYDPLQVEEPFLLVKTLHNI--FVQYESLQEKTCLFLILDGFDSLQD 140 + + P+ ++ + ++V T + ++ + +Q + +LD D++ D Sbjct: 121 ITSQLIVPD----SFEKNKQINAQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLD 176 Query: 141 LDAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQRYSTHCIP 185 L ++ I++ LPKD+++ +++ +++Y+ +P Sbjct: 177 -QQGLGDQCIRVKRFLPKDTQL---VLFSATFADAVRQYAKKIVP 217 >6MFU-A nrPDB Length = 225 Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust. Identities = 14/32 (43%), Positives = 20/32 (62%) Query: 25 DPDITPSNLILQGYSGTGKTYTLKKYFNANPN 56 +PD+ L++ G SGTGK+ LK F + PN Sbjct: 14 NPDVVNRPLVICGPSGTGKSTLLKTLFESQPN 45 >3EIQ-A nrPDB Length = 414 Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 12/140 (8%) Query: 26 PDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAVWLEPVELVSWKPLLQAIARTV---- 81 P I ++I Q SGTGKT T L + + L + L Q I + V Sbjct: 73 PCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALG 132 Query: 82 QYKLKTLYPNIPTT----DYDPLQVEEPFLLVKTLHNIF--VQYESLQEKTCLFLILDGF 135 Y + + I T + LQ+E P ++V T +F + L K +LD Sbjct: 133 DYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEA 192 Query: 136 DSL--QDLDAALFNKYIKLN 153 D + + +++ + KLN Sbjct: 193 DEMLSRGFKDQIYDIFQKLN 212 >5ZBZ-A nrPDB Length = 220 Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 12/140 (8%) Query: 26 PDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAVWLEPVELVSWKPLLQAIARTVQ--- 82 P I ++I Q SGTGKT T L + + L + L Q I + V Sbjct: 47 PCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALG 106 Query: 83 -YKLKTLYPNIPTT----DYDPLQVEEPFLLVKTLHNIF--VQYESLQEKTCLFLILDGF 135 Y + + I T + LQ+E P ++V T +F + L K +LD Sbjct: 107 DYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEA 166 Query: 136 DSL--QDLDAALFNKYIKLN 153 D + + +++ + KLN Sbjct: 167 DEMLSRGFKDQIYDIFQKLN 186 >5U0S-N nrPDB Length = 931 Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust. Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 1/82 (1%) Query: 169 TMLETSFLQRYSTHCIPTVMFPRYNVDEVSTILVMSRCGELMEDSCLRKRIIEEQITDCT 228 ++E F T C+ +M P N D + + V + G+L+ DS ++ ++ + T+ Sbjct: 592 ALIEDDFTTYVQTGCL-CIMMPSSNEDMLPVVFVRAHDGQLIFDSRIKGKLPYQSETETE 650 Query: 229 DDQFQNVAANFIHLIVQAFHSY 250 + + + I + VQ F S+ Sbjct: 651 KNCYIDWRTGRITIRVQNFSSF 672 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5V8F-E nrPDB 643 0.0 4XGC-E nrPDB 479 e-136 5UJM-E nrPDB 459 e-129 5UJ7-E nrPDB 306 1e-83 Sequences not found previously or not previously below threshold: 2QBY-A nrPDB 43 2e-04 2QBY-B nrPDB 34 0.19 2V1U-A nrPDB 32 0.65 4P4S-B nrPDB 31 0.90 5WDH-A nrPDB 30 2.5 3ZM5-A nrPDB 30 2.8 3B6V-A nrPDB 30 2.9 1OFI-A nrPDB 30 3.0 1IM2-A nrPDB 29 4.0 3ZYS-B nrPDB 29 4.1 3TPF-A nrPDB 29 4.1 1E94-E nrPDB 29 4.5 5GTM-A nrPDB 29 4.8 6MFU-A nrPDB 28 7.8 4GKR-A nrPDB 28 8.5 >5V8F-E nrPDB Length = 479 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 479/479 (100%), Positives = 479/479 (100%) Query: 1 MNVTTPEVAFREYQTNCLASYISADPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAV 60 MNVTTPEVAFREYQTNCLASYISADPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAV Sbjct: 1 MNVTTPEVAFREYQTNCLASYISADPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAV 60 Query: 61 WLEPVELVSWKPLLQAIARTVQYKLKTLYPNIPTTDYDPLQVEEPFLLVKTLHNIFVQYE 120 WLEPVELVSWKPLLQAIARTVQYKLKTLYPNIPTTDYDPLQVEEPFLLVKTLHNIFVQYE Sbjct: 61 WLEPVELVSWKPLLQAIARTVQYKLKTLYPNIPTTDYDPLQVEEPFLLVKTLHNIFVQYE 120 Query: 121 SLQEKTCLFLILDGFDSLQDLDAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQRYS 180 SLQEKTCLFLILDGFDSLQDLDAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQRYS Sbjct: 121 SLQEKTCLFLILDGFDSLQDLDAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQRYS 180 Query: 181 THCIPTVMFPRYNVDEVSTILVMSRCGELMEDSCLRKRIIEEQITDCTDDQFQNVAANFI 240 THCIPTVMFPRYNVDEVSTILVMSRCGELMEDSCLRKRIIEEQITDCTDDQFQNVAANFI Sbjct: 181 THCIPTVMFPRYNVDEVSTILVMSRCGELMEDSCLRKRIIEEQITDCTDDQFQNVAANFI 240 Query: 241 HLIVQAFHSYTGNDIFALNDLIDFKWPKYVSRITKENIFEPLALYKSAIKLFLSTDDNLS 300 HLIVQAFHSYTGNDIFALNDLIDFKWPKYVSRITKENIFEPLALYKSAIKLFLSTDDNLS Sbjct: 241 HLIVQAFHSYTGNDIFALNDLIDFKWPKYVSRITKENIFEPLALYKSAIKLFLSTDDNLS 300 Query: 301 ENGQGESAITTNRDDLENSQTYDLSIISKYLLIASYICSYLEPRYDASIFSRKTRIIQGR 360 ENGQGESAITTNRDDLENSQTYDLSIISKYLLIASYICSYLEPRYDASIFSRKTRIIQGR Sbjct: 301 ENGQGESAITTNRDDLENSQTYDLSIISKYLLIASYICSYLEPRYDASIFSRKTRIIQGR 360 Query: 361 AAYGRRKKKEVNPRYLQPSLFAIERLLAIFQAIFPIQGKAESGSLSALREESLMKANIEV 420 AAYGRRKKKEVNPRYLQPSLFAIERLLAIFQAIFPIQGKAESGSLSALREESLMKANIEV Sbjct: 361 AAYGRRKKKEVNPRYLQPSLFAIERLLAIFQAIFPIQGKAESGSLSALREESLMKANIEV 420 Query: 421 FQNLSELHTLKLIATTMNKNIDYLSPKVRWKVNVPWEIIKEISESVHFNISDYFSDIHE 479 FQNLSELHTLKLIATTMNKNIDYLSPKVRWKVNVPWEIIKEISESVHFNISDYFSDIHE Sbjct: 421 FQNLSELHTLKLIATTMNKNIDYLSPKVRWKVNVPWEIIKEISESVHFNISDYFSDIHE 479 >4XGC-E nrPDB Length = 460 Score = 479 bits (1233), Expect = e-136, Method: Composition-based stats. Identities = 112/492 (22%), Positives = 196/492 (39%), Gaps = 64/492 (13%) Query: 6 PEVAFREYQTNCLASYISADPDITPSNLILQGYSGTGKTYTLKKYF---NANPNLHAVWL 62 P RE L I + PS + L G+SGTGKT + + N+ L Sbjct: 10 PLFPCREAAIETLGELIGDSSETYPSAIYLFGHSGTGKTALTRAFLKECGKRQNVRTAHL 69 Query: 63 EPVELVSWKPLLQAIARTVQYKLKTLYPNIPTTDYDPLQVEEPFLLVKTLHNIFVQYESL 122 +E + K +L+ + L +L P+ D L+V+ V+ L Q + Sbjct: 70 NAIECYTTKIMLEIL-------LDSLAPD----QGDALKVDNMLDFVEQLRR---QAATR 115 Query: 123 QEKTCLFLILDGFDSLQDLDAALFNKYIKLNELLPKDSKINIKFIYTMLET----SFLQR 178 E + +D + L+D+DA + ++L EL N+ +L F + Sbjct: 116 VEDQGFLIAVDNAERLRDMDANVLPVLLRLQEL------TNLNLCVILLSQLPFEKFYNK 169 Query: 179 YSTHCIPTVMFPRYNVDEVSTIL---VMSRCGELMEDSCLRKRIIEEQITDCTDDQFQNV 235 I + +YN E IL +L+E K+ +E T+D + N Sbjct: 170 TGLSEIVCLHLAQYNKAETQRILGSDFQQVRNQLLEQFAQDKKRLEICQEAVTEDFYNNY 229 Query: 236 AANFIHLIVQAFHSYTGNDIFALNDLIDFKWPKY--------VSRITKENIFEPLALYKS 287 F+ + +A + A L + P +SR+ + +I PL +S Sbjct: 230 LNLFLSVFYKACRDVPELQLTARKCLSTYLEPVLDGTVDATDISRLWR-HIAGPL---RS 285 Query: 288 AIKLFLSTDDNLSENGQGESAITTNRDDLENSQTYDLSIISKYLLIASYICSYLEPRYDA 347 A+ + +E + +AI ++ + +Q+ +L +K+LLIA+++ S+ + D Sbjct: 286 ALTQIYMRIEKPAEEVEDFTAI-EDQSVRKLAQSLELPYYAKFLLIAAFLASHNAAKQDK 344 Query: 348 SIFSRKTRIIQGR--AAYGRRKKKEVNPRYLQPSLFAIERLLAIFQAIFPIQGKAESGSL 405 +F + + R R K E L P F+I+RLLAIF AI Sbjct: 345 RLFVKHHGKQRKRMQTVNARAKTTEKMSTTLGPKSFSIDRLLAIFYAI------------ 392 Query: 406 SALREESLMKANIEVFQNLSELHTLKLIA-TTMNKNIDYLSPKVRWKVNVPWEIIKEISE 464 L E+ + N+ +S L L L++ + +NI + R + + E + +I + Sbjct: 393 --LEEKVGLTCNL--LSQISTLVHLNLLSFVSGEQNI--MEGSARLQCTIGLEFVLQIGK 446 Query: 465 SVHFNISDYFSD 476 V FN+ Y D Sbjct: 447 VVGFNVRQYLCD 458 >5UJM-E nrPDB Length = 435 Score = 459 bits (1181), Expect = e-129, Method: Composition-based stats. Identities = 109/491 (22%), Positives = 197/491 (40%), Gaps = 87/491 (17%) Query: 8 VAFREYQTNCLASYISADPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAVWLEPVEL 67 V RE Q + L S + ++ + G++ +GKTY + L V++ VE Sbjct: 8 VLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKT-LELPHVFVNCVEC 66 Query: 68 VSWKPLLQAIARTVQYKLKTLYPNIPTTDYDPLQVE---EPFLLVKTLHNIFVQYESLQE 124 + + LL+ I + N ++ D E E F L E+L++ Sbjct: 67 FTLRLLLEQILNKL---------NHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKD 117 Query: 125 KTCLFLILDGFDSLQDLDAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQRYSTHCI 184 +T ++++LD + L+D++A L +++L EL D + + F+ ++ F R +T C Sbjct: 118 QT-VYIVLDKAEYLRDMEANLLPGFLRLQEL--ADRNVTVLFLSEIVWEKF--RPNTGCF 172 Query: 185 -PTVM-FPRYNVDEVSTILVMSRCGELMEDSCLRKRIIEEQITDCTDDQFQNVAANFIHL 242 P V+ FP Y++ + IL E D A +I++ Sbjct: 173 EPFVLYFPDYSIGNLQKILSHDHPPEYSAD----------------------FYAAYINI 210 Query: 243 IVQAFHSYTGNDIFALNDLIDFKWPKYVSRITKENIFEPLALYKSAIKLFLSTDDNLSEN 302 ++ F++ D+ L L +PKY + K E + KL+ + + +L + Sbjct: 211 LLGVFYT-VCRDLKELRHLAVLNFPKYCEPVVKGEASE-----RDTRKLWRNIEPHLKKA 264 Query: 303 GQ--------GESAITTNRDDLENSQTYD--------LSIISKYLLIASYICSYLEPRYD 346 Q +DD + Q L SK++LIA+Y+ SY R D Sbjct: 265 MQTVYLREISSSQWEKLQKDDTDPGQLKGLSAHTHVELPYYSKFILIAAYLASYNPARTD 324 Query: 347 ASIFSRKTRIIQGRAAYGRRKKKEVNPRYLQPSLFAIERLLAIFQAIFPIQGKAESGSLS 406 F + I+ + + ++ +K N L P F ++RLLAI +I Sbjct: 325 KRFFLKHHGKIK-KTNFLKKHEKTSN-HLLGPKPFPLDRLLAILYSIV------------ 370 Query: 407 ALREESLMKANIEVFQNL-SELHTLKLIATTMNKNIDYLSPKVRWKVNVPWEIIKEISES 465 +S + +F + S + L + +D PK +K V + I+ I+ + Sbjct: 371 ----DSRVAPTANIFSQITSLVTLQLLTLVGHDDQLD--GPK--YKCTVSLDFIRAIART 422 Query: 466 VHFNISDYFSD 476 V+F+I Y D Sbjct: 423 VNFDIIKYLYD 433 >5UJ7-E nrPDB Length = 284 Score = 306 bits (784), Expect = 1e-83, Method: Composition-based stats. Identities = 67/320 (20%), Positives = 126/320 (39%), Gaps = 56/320 (17%) Query: 8 VAFREYQTNCLASYISADPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAVWLEPVEL 67 V RE Q + L S + ++ + G++ +GKTY + L V++ VE Sbjct: 8 VLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKT-LELPHVFVNCVEC 66 Query: 68 VSWKPLLQAIARTVQYKLKTLYPNIPTTDYDPLQVE---EPFLLVKTLHNIFVQYESLQE 124 + + LL+ I + N ++ D E E F L E+L++ Sbjct: 67 FTLRLLLEQILNKL---------NHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKD 117 Query: 125 KTCLFLILDGFDSLQDLDAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQRYSTHCI 184 +T ++++LD + L+D++A L +++L EL D + + F+ ++ F R +T C Sbjct: 118 QT-VYIVLDKAEYLRDMEANLLPGFLRLQEL--ADRNVTVLFLSEIVWEKF--RPNTGCF 172 Query: 185 -PTVM-FPRYNVDEVSTILVMSRCGELMEDSCLRKRIIEEQITDCTDDQFQNVAANFIHL 242 P V+ FP Y++ + IL E D A +I++ Sbjct: 173 EPFVLYFPDYSIGNLQKILSHDHPPEYSAD----------------------FYAAYINI 210 Query: 243 IVQAFHSYTGNDIFALNDLIDFKWPKYVSRITKENIFEPLALYKSAIKLFLSTDDNLSEN 302 ++ F++ D+ L L +PKY + K E + KL+ + + +L + Sbjct: 211 LLGVFYT-VCRDLKELRHLAVLNFPKYCEPVVKGEASE-----RDTRKLWRNIEPHLKKA 264 Query: 303 GQ--------GESAITTNRD 314 Q +D Sbjct: 265 MQTVYLREISSSQWEKLQKD 284 >2QBY-A nrPDB Length = 386 Score = 43.2 bits (100), Expect = 2e-04, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 83/209 (39%), Gaps = 35/209 (16%) Query: 7 EVAFREYQTNCLASYISADP-DITPSNLILQGYSGTGKTYTLKKYFNANP-----NLHAV 60 E+ RE Q +AS ++ + P+N+ + G +GTGKT +K + V Sbjct: 21 ELPHREDQIRKIASILAPLYREEKPNNIFIYGLTGTGKTAVVKFVLSKLHKKFLGKFKHV 80 Query: 61 WLEPVELVSWKPLLQAIARTVQYKLKTLYPNIPTTDYDPLQVEEPFLLVKTLHNIFVQYE 120 ++ ++ + +L + ++ K+ + L + E L + L Y Sbjct: 81 YINTRQIDTPYRVLADLLESLDVKVP----------FTGLSIAE---LYRRLVKAVRDYG 127 Query: 121 SLQEKTCLFLILDGFD-SLQDLDAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQ-- 177 S + ++LD D ++ + + K ++N + K I FI + F+ Sbjct: 128 SQ-----VVIVLDEIDAFVKKYNDDILYKLSRINSEVNKSK---ISFIGITNDVKFVDLL 179 Query: 178 ----RYSTHCIPTVMFPRYNVDEVSTILV 202 + S ++FP YN +E+ IL Sbjct: 180 DPRVKSSLSE-EEIIFPPYNAEELEDILT 207 >2QBY-B nrPDB Length = 384 Score = 33.6 bits (75), Expect = 0.19, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 73/210 (34%), Gaps = 37/210 (17%) Query: 7 EVAFREYQT--NCLASYISADPDITPSNLILQGYSGTGKTYTLKKYFNANPN-------- 56 E+ FRE +A ++ SNL L G +GTGKT+ K FN Sbjct: 21 EIPFREDILRDAAIAIRYFVKNEVKFSNLFL-GLTGTGKTFVSKYIFNEIEEVKKEDEEY 79 Query: 57 --LHAVWLEPVELVSWKPLLQAIARTVQYKLKTLYPNIPTTDYDPLQVEEPFLLVKTLHN 114 + ++ E+ QA+ ++ KL + + + E +K Sbjct: 80 KDVKQAYVNCREVGGTP---QAVLSSLAGKLTGF-----SVPKHGINLGEYIDKIKNGTR 131 Query: 115 IFVQYESLQEKTCLFLILDGFDSLQDLDAALFNKYIKLNELLPKDSKINIKFIYTMLETS 174 + LD D+L I L +LL D+ I++ I + Sbjct: 132 NIRA----------IIYLDEVDTLVKRRG----GDIVLYQLLRSDANISVIMISNDINVR 177 Query: 175 FLQRYS--THCIPTVMFPRYNVDEVSTILV 202 + P+V+F Y+ +++ IL Sbjct: 178 DYMEPRVLSSLGPSVIFKPYDAEQLKFILS 207 >2V1U-A nrPDB Length = 387 Score = 31.7 bits (70), Expect = 0.65, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 75/203 (36%), Gaps = 22/203 (10%) Query: 8 VAFREYQTNCLASYIS-ADPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAVWLEPVE 66 + RE + LA ++ A PSN +L G +GTGKT + A Sbjct: 21 LPHREAELRRLAEVLAPALRGEKPSNALLYGLTGTGKTAVARLVLR-RLEARAS------ 73 Query: 67 LVSWKPLLQAIARTVQYKLKTLYPNIPTTDYDPLQVEEPFLLVKTLHNIFVQYESLQEKT 126 S L++ I +++ + ++V L V ++ V+ S + Sbjct: 74 --SLGVLVKPIYVNARHRETPYRVASAIAEAVGVRVPFTGLSVGEVYERLVKRLSRL-RG 130 Query: 127 CLFLILDGFDSL--QDLDAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQ------R 178 ++LD D L + L + ++N+ L ++ + + F++ + Sbjct: 131 IYIIVLDEIDFLPKRPGGQDLLYRITRINQELG--DRVWVSLVGITNSLGFVENLEPRVK 188 Query: 179 YSTHCIPTVMFPRYNVDEVSTIL 201 S + V FP Y ++ IL Sbjct: 189 SSLGEVELV-FPPYTAPQLRDIL 210 >4P4S-B nrPDB Length = 346 Score = 31.3 bits (69), Expect = 0.90, Method: Composition-based stats. Identities = 46/324 (14%), Positives = 105/324 (32%), Gaps = 30/324 (9%) Query: 22 ISADPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAVWLEPVELVSWKPLLQAIARTV 81 + + D+ + + G +GK+ L+ + + LV L+ + Sbjct: 20 LGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLV---LKLKKLVNED 76 Query: 82 QYKLKTLYPNIPTTDYDPLQVEEPFLLVKTLHNIFVQYESLQEKTCLFLILDGFDSLQDL 141 +++ K Y + D +VE+ + + E + L + + DL Sbjct: 77 KWRGKVSYQDYEIEISDASEVEKEINKAQN----AIAGEGMGISHELITLEISSRDVPDL 132 Query: 142 DAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQRYSTHCIPTVMFPRYNVDEVSTIL 201 + + + +I + L ++QR T I V+ P + L Sbjct: 133 TLIDLPGITR---VAVGNQPADIGYKIKTLIKKYIQRQET--ISLVVVPSNVDIATTEAL 187 Query: 202 VMSRCGELMEDSCLRKRIIEEQITDCTDDQFQNVAANFIHLIVQAFHSYTGNDIFALNDL 261 M++ + D + + + T+D+ +V N + + + + + D Sbjct: 188 SMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKKGYMIVKCRGQQEIQDQ 247 Query: 262 IDFKWPKYVSRITKENIFEPLALYKSAIKLFLSTDDNLSENGQGE--------------S 307 + +I FE ++ ++ +T +L+E E Sbjct: 248 LSLSEALQREKIF----FENHPYFRDLLEEGKATVPSLAEKLTSELITHISKSLPLLENQ 303 Query: 308 AITTNRDDLENSQTYDLSIISKYL 331 T++ E Q Y +K+L Sbjct: 304 IKETHQRITEELQKYGGDPKAKFL 327 >5WDH-A nrPDB Length = 376 Score = 29.8 bits (65), Expect = 2.5, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%) Query: 16 NCLASYISADPDITPSNLILQGYSGTGKTYTLKKYFNANPNL 57 +A + + D P + G +G+GKT+T++ +P L Sbjct: 102 EEIAMLVQSALDGYPVCIFAYGQTGSGKTFTMEGGPGGDPQL 143 >3ZM5-A nrPDB Length = 465 Score = 29.8 bits (65), Expect = 2.8, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 50/134 (37%), Gaps = 15/134 (11%) Query: 292 FLSTDDNLSENGQGESAITTNRDDLENS---------QTYDLSIISKYLLIASYICSYLE 342 +L D + GQG T+ + ++S Q DL + KY + I SY+ Sbjct: 226 YLPIDKKVVRFGQGAELEITDLVERKDSLTFKANFLEQALDLPVTGKYNATNAMIASYVA 285 Query: 343 -----PRYDASIFSRKTRIIQGRAAYGRRKK-KEVNPRYLQPSLFAIERLLAIFQAIFPI 396 + + + + R + + ++ + A++ +L F AI Sbjct: 286 LQEGVSEEQIRLAFQHLELTRNRTEWKKAANGADILSDVYNANPTAMKLILETFSAIPAN 345 Query: 397 QGKAESGSLSALRE 410 +G + L+ ++E Sbjct: 346 EGGKKIAVLADMKE 359 >3B6V-A nrPDB Length = 395 Score = 29.8 bits (65), Expect = 2.9, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 32 NLILQGYSGTGKTYTLKKYFNANPNLHAVWLEPVE 66 + G +GTGKTYT++ + P L V E Sbjct: 104 TVFAYGQTGTGKTYTMQGTW-VEPELRGVIPNAFE 137 >1OFI-A nrPDB Length = 310 Score = 29.8 bits (65), Expect = 3.0, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 25 DPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAVWLEPVE 66 ++TP N+++ G +G GKT ++ N + +E + Sbjct: 45 RHEVTPKNILMIGPTGVGKTEIARR-LAKLANAPFIKVEATK 85 >1IM2-A nrPDB Length = 444 Score = 29.4 bits (64), Expect = 4.0, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 25 DPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAVWLEPVE 66 ++TP N+++ G +G GKT ++ N + +E + Sbjct: 45 RHEVTPKNILMIGPTGVGKTEIARR-LAKLANAPFIKVEATK 85 >3ZYS-B nrPDB Length = 662 Score = 29.4 bits (64), Expect = 4.1, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 94/285 (32%), Gaps = 16/285 (5%) Query: 22 ISADPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAVWLEPVELVSWKPLLQAIARTV 81 + + D+ + + G +GK+ L+ + + LV L+ + Sbjct: 62 LGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLV---LKLKKLVNED 118 Query: 82 QYKLKTLYPNIPTTDYDPLQVEEPFLLVKTLHNIFVQYESLQEKTCLFLILDGFDSLQDL 141 +++ K Y + D +VE+ + + E + L + + DL Sbjct: 119 KWRGKVSYQDYEIEISDASEVEKEINKAQN----AIAGEGMGISHELITLEISSRDVPDL 174 Query: 142 DAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQRYSTHCIPTVMFPRYNVDEVSTIL 201 + + + +I + L ++QR T I V+ P + L Sbjct: 175 TLIDLPGITR---VAVGNQPADIGYKIKTLIKKYIQRQET--ISLVVVPSNVDIATTEAL 229 Query: 202 VMSRCGELMEDSCLRKRIIEEQITDCTDDQFQNVAANFIHLIVQAFHSYTGNDIFALNDL 261 M++ + D + + + T+D+ +V N + + + + + D Sbjct: 230 SMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKKGYMIVKCRGQQEIQDQ 289 Query: 262 IDFKWPKYVSRITKENIFEPLALYKSAIKLFLSTDDNLSENGQGE 306 + +I FE ++ ++ +T L+E E Sbjct: 290 LSLSEALQREKIF----FENHPYFRDLLEEGKATVPCLAEKLTSE 330 >3TPF-A nrPDB Length = 307 Score = 29.0 bits (63), Expect = 4.1, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 1/102 (0%) Query: 115 IFVQYESLQEKTCLFLILDGFDSLQDLDAALFNKYIKLNELLPKDSKINIKFIYTMLETS 174 F ++L + L D F++L+D D + + ++ + E K+ KI +F M++ Sbjct: 189 EFAMKQALISGAKISLGYDKFEALKDKDVVITDTWVSMGEENEKERKIK-EFEGFMIDEK 247 Query: 175 FLQRYSTHCIPTVMFPRYNVDEVSTILVMSRCGELMEDSCLR 216 + + I P Y EVS + + E++ R Sbjct: 248 AMSVANKDAILLHCLPAYRGYEVSEEIFEKHADVIFEEARNR 289 >1E94-E nrPDB Length = 449 Score = 29.0 bits (63), Expect = 4.5, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 25 DPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAVWLEPVE 66 ++TP N+++ G +G GKT ++ N + +E + Sbjct: 51 RHEVTPKNILMIGPTGVGKTEIARR-LAKLANAPFIKVEATK 91 >5GTM-A nrPDB Length = 601 Score = 29.0 bits (63), Expect = 4.8, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 94/285 (32%), Gaps = 16/285 (5%) Query: 22 ISADPDITPSNLILQGYSGTGKTYTLKKYFNANPNLHAVWLEPVELVSWKPLLQAIARTV 81 + + D+ + + G +GK+ L+ + + LV L+ + Sbjct: 30 LGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLV---LKLKKLVNED 86 Query: 82 QYKLKTLYPNIPTTDYDPLQVEEPFLLVKTLHNIFVQYESLQEKTCLFLILDGFDSLQDL 141 +++ K Y + D +VE+ + + E + L + + DL Sbjct: 87 KWRGKVSYQDYEIEISDASEVEKEINKAQN----AIAGEGMGISHELITLEISSRDVPDL 142 Query: 142 DAALFNKYIKLNELLPKDSKINIKFIYTMLETSFLQRYSTHCIPTVMFPRYNVDEVSTIL 201 + + + +I + L ++QR T I V+ P + L Sbjct: 143 TLIDLPGITR---VAVGNQPADIGYKIKTLIKKYIQRQET--ISLVVVPSNVDIATTEAL 197 Query: 202 VMSRCGELMEDSCLRKRIIEEQITDCTDDQFQNVAANFIHLIVQAFHSYTGNDIFALNDL 261 M++ + D + + + T+D+ +V N + + + + + D Sbjct: 198 SMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKKGYMIVKCRGQQEIQDQ 257 Query: 262 IDFKWPKYVSRITKENIFEPLALYKSAIKLFLSTDDNLSENGQGE 306 + +I FE ++ ++ +T L+E E Sbjct: 258 LSLSEALQREKIF----FENHPYFRDLLEEGKATVPCLAEKLTSE 298 >6MFU-A nrPDB Length = 225 Score = 28.2 bits (61), Expect = 7.8, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 20/32 (62%) Query: 25 DPDITPSNLILQGYSGTGKTYTLKKYFNANPN 56 +PD+ L++ G SGTGK+ LK F + PN Sbjct: 14 NPDVVNRPLVICGPSGTGKSTLLKTLFESQPN 45 >4GKR-A nrPDB Length = 371 Score = 28.2 bits (61), Expect = 8.5, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 15/30 (50%) Query: 18 LASYISADPDITPSNLILQGYSGTGKTYTL 47 + I + D + G +G+GKTYT+ Sbjct: 95 VGQLIQSSLDGYNVCIFAYGQTGSGKTYTM 124 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.317 0.123 0.294 Lambda K H 0.267 0.0377 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,883,395 Number of Sequences: 36641 Number of extensions: 531714 Number of successful extensions: 1746 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 33 Number of HSP's that attempted gapping in prelim test: 1688 Number of HSP's gapped (non-prelim): 47 length of query: 479 length of database: 10,336,785 effective HSP length: 101 effective length of query: 378 effective length of database: 6,636,044 effective search space: 2508424632 effective search space used: 2508424632 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 61 (28.2 bits)