BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P49848 (677 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6MZC-I nrPDB 1349 0.0 6HQA-D nrPDB 232 5e-61 6F3T-E nrPDB 181 1e-45 1TAF-B nrPDB 70 3e-12 4ATG-A nrPDB 69 7e-12 4RZ3-A nrPDB 32 0.70 6A5L-b nrPDB 31 2.1 3W99-B nrPDB 31 2.1 1AOI-B nrPDB 31 2.1 3C0Q-A nrPDB 30 2.7 4XYI-B nrPDB 30 3.6 6GEN-C nrPDB 30 4.1 2LY8-A nrPDB 30 4.1 2L5A-A nrPDB 28 8.8 >6MZC-I nrPDB Length = 677 Score = 1349 bits (3491), Expect = 0.0, Method: Compositional matrix adjust. Identities = 667/677 (98%), Positives = 667/677 (98%) Query: 1 MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHM 60 MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHM Sbjct: 1 MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHM 60 Query: 61 GKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINT 120 GKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINT Sbjct: 61 GKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINT 120 Query: 121 PLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKG 180 PLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKG Sbjct: 121 PLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKG 180 Query: 181 KGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRA 240 KGQGATTADGKGKEKKAPPLLEGAPL SVEQQLYYKEITEACVGSCEAKRA Sbjct: 181 KGQGATTADGKGKEKKAPPLLEGAPLXXXXXXXXXXSVEQQLYYKEITEACVGSCEAKRA 240 Query: 241 EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY 300 EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY Sbjct: 241 EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY 300 Query: 301 VHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFT 360 VHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFT Sbjct: 301 VHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFT 360 Query: 361 KSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGA 420 KSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGA Sbjct: 361 KSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGA 420 Query: 421 DHVQSLLLKHCAPVLAKLRPPPDNQDAYRAEFGSLGPLLCSQVVKARAQAALQAQQVNRT 480 DHVQSLLLKHCAPVLAKLRPPPDNQDAYRAEFGSLGPLLCSQVVKARAQAALQAQQVNRT Sbjct: 421 DHVQSLLLKHCAPVLAKLRPPPDNQDAYRAEFGSLGPLLCSQVVKARAQAALQAQQVNRT 480 Query: 481 TLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIV 540 TLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIV Sbjct: 481 TLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIV 540 Query: 541 MSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGP 600 MSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGP Sbjct: 541 MSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGP 600 Query: 601 GSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPSPLSGSALCGGKQEAGDSPPPAPGT 660 GSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPSPLSGSALCGGKQEAGDSPPPAPGT Sbjct: 601 GSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPSPLSGSALCGGKQEAGDSPPPAPGT 660 Query: 661 PKANGSQPNSGSPQPAP 677 PKANGSQPNSGSPQPAP Sbjct: 661 PKANGSQPNSGSPQPAP 677 >6HQA-D nrPDB Length = 485 Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 148/416 (35%), Positives = 234/416 (56%), Gaps = 43/416 (10%) Query: 15 PSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYA 74 PS+++K AES+GI + EE + L ++ YRI EI A KFM GKR+ L TSDID A Sbjct: 19 PSDTVKDAAESLGIFNLNEEAAKNLAMDIEYRIHEILDQASKFMRHGKRRTLHTSDIDRA 78 Query: 75 LKLKNVEPLYGFHAQEFIPFRFA-SGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKA 133 LK+ N+EPLYG+ + F+ A G G+ LY+ ++ EVD +IN PLP+VP A Sbjct: 79 LKVLNLEPLYGYDVSRPLVFKEALVGAGQNLYYVDDDEVDFEKLINEPLPKVPRFSTFTA 138 Query: 134 HWLSIEGCQPAIPENPPPAPKEQ----QKAEATEPLKSAKPGQEEDGPLKGKGQGATTAD 189 HWL+IEG QPAIP+NP P + + +ED + G + + Sbjct: 139 HWLAIEGVQPAIPQNPSPNDIKNILPINRGSMENMFSLINDEVKEDTNEEFTSTGPSVSS 198 Query: 190 GKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAE-----ALQ 244 +K+ L +KP H LS E QLY+ +I E + E K AE ALQ Sbjct: 199 NISNQKQG--------LEVKPLVKHVLSRELQLYFDKIVEVLLNQEETKEAELLRNSALQ 250 Query: 245 SIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHEL 304 S+ DPGL+Q++P F FISE + N+ N++LL ++ ++ +L+ N +L+LE YVH + Sbjct: 251 SVRADPGLHQLVPYFIQFISETITKNL--KNISLLSTMLELIYSLLMNESLFLEPYVHAI 308 Query: 305 IPAVMTCIVSRQLCLRPDVDN------HWALRDFAARLVAQICKHFSTTTNNIQSRITKT 358 IP ++T ++++++ +VD+ ALR+ +A L+ ++ + F ++ + ++ RIT+T Sbjct: 309 IPCILTLLLAKKIG---NVDDELQKQQQLALRELSASLLERVIEDFGSSYSTLKPRITRT 365 Query: 359 FTKSW--VDEKTPWTTRYGSIAGLAELGHDVIKTLI-----------LPRLQQEGE 401 +++ V+ TP T+YG++ GL LG +VI+ ++ L +LQQE + Sbjct: 366 LLRAFVSVNNTTP-GTQYGALLGLRGLGSEVIRIVVLGNVINWSSTFLEKLQQEDQ 420 >6F3T-E nrPDB Length = 94 Score = 181 bits (458), Expect = 1e-45, Method: Composition-based stats. Identities = 89/91 (97%), Positives = 89/91 (97%) Query: 5 KKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQ 64 KKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQ Sbjct: 1 KKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQ 60 Query: 65 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFR 95 KLTTSDIDYALKLKNVEPLYGFHAQEFI R Sbjct: 61 KLTTSDIDYALKLKNVEPLYGFHAQEFIRLR 91 >1TAF-B nrPDB Length = 70 Score = 70.1 bits (170), Expect = 3e-12, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 49/69 (71%) Query: 9 LSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTT 68 L + + +ESMKV+AES+G+ + ++ + L ++VS ++K I QDA KFM+ KRQKL+ Sbjct: 2 LYGSSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSV 61 Query: 69 SDIDYALKL 77 DID +LK+ Sbjct: 62 RDIDMSLKV 70 >4ATG-A nrPDB Length = 196 Score = 68.9 bits (167), Expect = 7e-12, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 92/184 (50%), Gaps = 22/184 (11%) Query: 214 HELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGV-----R 268 H L E QLY+ +I + A++ + + GL Q++P F ISE + Sbjct: 3 HMLPKELQLYFDKILSMIKSD---MKDIAIECLEKESGLQQLVPYFIQHISELILKSFKE 59 Query: 269 VNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWA 328 V++ +AL L++ N ++++ Y+H+++P+++TC++ + + VD+ Sbjct: 60 AEVLKTCIALYFSLIK-------NKHVFIDPYLHQILPSLLTCVIGKSI-----VDDD-- 105 Query: 329 LRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELGHDVI 388 +R +A +V I +S + + R+ KT W+D ++YG++ L+ L +V+ Sbjct: 106 VRKMSADIVKYIYDTYSRSYKTLAPRVLKTLKGVWMDPNRSEDSQYGALYCLSILSKNVV 165 Query: 389 KTLI 392 T+I Sbjct: 166 NTVI 169 >4RZ3-A nrPDB Length = 295 Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 9/105 (8%) Query: 64 QKLTTSDIDYAL-KLKNVEPLYGFHAQEFIPFRFASGG-GRELYFYEEKEVDLSDIINTP 121 Q L T+ ID L +L+ V Y +++ F +G G LYF K VD ++ TP Sbjct: 120 QGLDTASIDRFLTELQAVASQY-----DYLIFDMGAGASGERLYFL--KSVDDVFVVTTP 172 Query: 122 LPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLK 166 P D ++ G + A KE++ E E LK Sbjct: 173 EPTAMTDAYAMMKYMHAAGSEAPFSVIVNRAGKEREGYEVFERLK 217 >6A5L-b nrPDB Length = 106 Score = 30.8 bits (68), Expect = 2.1, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Query: 47 IKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGF 86 ++ + +DA+ + KR+ +T D+ YALK + LYGF Sbjct: 66 LENVIRDAVTYTEHAKRKTVTAMDVVYALK-RQGRTLYGF 104 >3W99-B nrPDB Length = 105 Score = 30.8 bits (68), Expect = 2.1, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Query: 47 IKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGF 86 ++ + +DA+ + KR+ +T D+ YALK + LYGF Sbjct: 65 LENVIRDAVTYTEHAKRKTVTAMDVVYALK-RQGRTLYGF 103 >1AOI-B nrPDB Length = 87 Score = 30.8 bits (68), Expect = 2.1, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Query: 47 IKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGF 86 ++ + +DA+ + KR+ +T D+ YALK + LYGF Sbjct: 47 LENVIRDAVTYTEHAKRKTVTAMDVVYALK-RQGRTLYGF 85 >3C0Q-A nrPDB Length = 301 Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 2/78 (2%) Query: 383 LGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGADHVQSLLL--KHCAPVLAKLRP 440 LG +TL L L +E R ++ + L I R ADH +L +H P + Sbjct: 34 LGATTNRTLRLAHLTEERVREKAAENLRDLERILRFNADHGFALFRIGQHLIPFASHPLF 93 Query: 441 PPDNQDAYRAEFGSLGPL 458 P D + AY E LG L Sbjct: 94 PYDWEGAYEEELARLGAL 111 >4XYI-B nrPDB Length = 103 Score = 30.0 bits (66), Expect = 3.6, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Query: 47 IKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGF 86 ++ + +DA+ + KR+ +T+ D+ YALK + +YGF Sbjct: 63 LENVIRDAVTYTEHAKRKTVTSLDVVYALK-RQGRTIYGF 101 >6GEN-C nrPDB Length = 103 Score = 29.6 bits (65), Expect = 4.1, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Query: 47 IKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGF 86 ++ + +D++ + KR+ +T+ D+ YALK + LYGF Sbjct: 63 LESVIRDSVTYTEHAKRKTVTSLDVVYALK-RQGRTLYGF 101 >2LY8-A nrPDB Length = 121 Score = 29.6 bits (65), Expect = 4.1, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Query: 47 IKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGF 86 ++ + +D++ + KR+ +T+ D+ YALK + LYGF Sbjct: 81 LESVIRDSVTYTEHAKRKTVTSLDVVYALK-RQGRTLYGF 119 >2L5A-A nrPDB Length = 235 Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust. Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Query: 47 IKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGF 86 ++ + +D++ + KR+ +T+ D+ YALK + LYGF Sbjct: 195 LESVIRDSVTYTEHAKRKTVTSLDVVYALK-RQGRTLYGF 233 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6MZC-I nrPDB 1108 0.0 6HQA-D nrPDB 538 e-153 4ATG-A nrPDB 234 1e-61 6F3T-E nrPDB 164 1e-40 1TAF-B nrPDB 109 3e-24 Sequences not found previously or not previously below threshold: 1KU5-A nrPDB 41 0.002 2PF4-A nrPDB 37 0.019 3W4R-A nrPDB 37 0.028 6A5L-b nrPDB 35 0.090 3W99-B nrPDB 35 0.090 1AOI-B nrPDB 35 0.090 1B67-A nrPDB 35 0.12 4RCO-A nrPDB 34 0.18 4LAC-A nrPDB 34 0.18 3C5W-A nrPDB 34 0.18 4XYI-B nrPDB 34 0.19 1BFM-A nrPDB 34 0.19 6GEN-C nrPDB 34 0.20 2OT8-A nrPDB 34 0.31 2EYZ-A nrPDB 33 0.36 2YFV-B nrPDB 33 0.38 2LY8-A nrPDB 33 0.41 2L5A-A nrPDB 33 0.41 3VI4-A nrPDB 33 0.48 4WK0-A nrPDB 33 0.52 5L3D-A nrPDB 32 0.88 1S5J-A nrPDB 32 1.1 1Y2J-A nrPDB 31 2.2 5WDH-A nrPDB 30 2.3 6HIY-Cj nrPDB 30 2.7 2Z9I-A nrPDB 30 3.4 5ONS-A nrPDB 30 4.5 4MHC-A nrPDB 30 4.6 6AH0-4 nrPDB 29 4.9 1IT8-A nrPDB 29 6.3 6HQA-K nrPDB 29 6.7 >6MZC-I nrPDB Length = 677 Score = 1108 bits (2865), Expect = 0.0, Method: Composition-based stats. Identities = 667/677 (98%), Positives = 667/677 (98%) Query: 1 MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHM 60 MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHM Sbjct: 1 MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHM 60 Query: 61 GKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINT 120 GKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINT Sbjct: 61 GKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINT 120 Query: 121 PLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKG 180 PLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKG Sbjct: 121 PLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKG 180 Query: 181 KGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRA 240 KGQGATTADGKGKEKKAPPLLEGAPL SVEQQLYYKEITEACVGSCEAKRA Sbjct: 181 KGQGATTADGKGKEKKAPPLLEGAPLXXXXXXXXXXSVEQQLYYKEITEACVGSCEAKRA 240 Query: 241 EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY 300 EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY Sbjct: 241 EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY 300 Query: 301 VHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFT 360 VHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFT Sbjct: 301 VHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFT 360 Query: 361 KSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGA 420 KSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGA Sbjct: 361 KSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGA 420 Query: 421 DHVQSLLLKHCAPVLAKLRPPPDNQDAYRAEFGSLGPLLCSQVVKARAQAALQAQQVNRT 480 DHVQSLLLKHCAPVLAKLRPPPDNQDAYRAEFGSLGPLLCSQVVKARAQAALQAQQVNRT Sbjct: 421 DHVQSLLLKHCAPVLAKLRPPPDNQDAYRAEFGSLGPLLCSQVVKARAQAALQAQQVNRT 480 Query: 481 TLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIV 540 TLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIV Sbjct: 481 TLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIV 540 Query: 541 MSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGP 600 MSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGP Sbjct: 541 MSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATTAPPSTAPSGP 600 Query: 601 GSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPSPLSGSALCGGKQEAGDSPPPAPGT 660 GSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPSPLSGSALCGGKQEAGDSPPPAPGT Sbjct: 601 GSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASSPSPLSGSALCGGKQEAGDSPPPAPGT 660 Query: 661 PKANGSQPNSGSPQPAP 677 PKANGSQPNSGSPQPAP Sbjct: 661 PKANGSQPNSGSPQPAP 677 >6HQA-D nrPDB Length = 485 Score = 538 bits (1386), Expect = e-153, Method: Composition-based stats. Identities = 147/415 (35%), Positives = 232/415 (55%), Gaps = 41/415 (9%) Query: 15 PSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYA 74 PS+++K AES+GI + EE + L ++ YRI EI A KFM GKR+ L TSDID A Sbjct: 19 PSDTVKDAAESLGIFNLNEEAAKNLAMDIEYRIHEILDQASKFMRHGKRRTLHTSDIDRA 78 Query: 75 LKLKNVEPLYGFHAQEFIPFRFA-SGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKA 133 LK+ N+EPLYG+ + F+ A G G+ LY+ ++ EVD +IN PLP+VP A Sbjct: 79 LKVLNLEPLYGYDVSRPLVFKEALVGAGQNLYYVDDDEVDFEKLINEPLPKVPRFSTFTA 138 Query: 134 HWLSIEGCQPAIPENPPPAPKEQ----QKAEATEPLKSAKPGQEEDGPLKGKGQGATTAD 189 HWL+IEG QPAIP+NP P + + +ED + G + + Sbjct: 139 HWLAIEGVQPAIPQNPSPNDIKNILPINRGSMENMFSLINDEVKEDTNEEFTSTGPSVSS 198 Query: 190 GKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAE-----ALQ 244 +K+ L +KP H LS E QLY+ +I E + E K AE ALQ Sbjct: 199 NISNQKQG--------LEVKPLVKHVLSRELQLYFDKIVEVLLNQEETKEAELLRNSALQ 250 Query: 245 SIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHEL 304 S+ DPGL+Q++P F FISE + N+ N++LL ++ ++ +L+ N +L+LE YVH + Sbjct: 251 SVRADPGLHQLVPYFIQFISETITKNL--KNISLLSTMLELIYSLLMNESLFLEPYVHAI 308 Query: 305 IPAVMTCIVSRQLCLRPDVDN------HWALRDFAARLVAQICKHFSTTTNNIQSRITKT 358 IP ++T ++++++ +VD+ ALR+ +A L+ ++ + F ++ + ++ RIT+T Sbjct: 309 IPCILTLLLAKKIG---NVDDELQKQQQLALRELSASLLERVIEDFGSSYSTLKPRITRT 365 Query: 359 FTKSWVD-EKTPWTTRYGSIAGLAELGHDVIKTLI-----------LPRLQQEGE 401 +++V T T+YG++ GL LG +VI+ ++ L +LQQE + Sbjct: 366 LLRAFVSVNNTTPGTQYGALLGLRGLGSEVIRIVVLGNVINWSSTFLEKLQQEDQ 420 >4ATG-A nrPDB Length = 196 Score = 234 bits (596), Expect = 1e-61, Method: Composition-based stats. Identities = 46/195 (23%), Positives = 95/195 (48%), Gaps = 22/195 (11%) Query: 214 HELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGV-----R 268 H L E QLY+ +I + A++ + + GL Q++P F ISE + Sbjct: 3 HMLPKELQLYFDKILSMIKSD---MKDIAIECLEKESGLQQLVPYFIQHISELILKSFKE 59 Query: 269 VNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWA 328 V++ +AL L++ N ++++ Y+H+++P+++TC++ + + VD+ Sbjct: 60 AEVLKTCIALYFSLIK-------NKHVFIDPYLHQILPSLLTCVIGKSI-----VDDD-- 105 Query: 329 LRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELGHDVI 388 +R +A +V I +S + + R+ KT W+D ++YG++ L+ L +V+ Sbjct: 106 VRKMSADIVKYIYDTYSRSYKTLAPRVLKTLKGVWMDPNRSEDSQYGALYCLSILSKNVV 165 Query: 389 KTLILPRLQQEGERI 403 T+I ++ I Sbjct: 166 NTVIREHAEEYKRTI 180 >6F3T-E nrPDB Length = 94 Score = 164 bits (414), Expect = 1e-40, Method: Composition-based stats. Identities = 89/91 (97%), Positives = 89/91 (97%) Query: 5 KKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQ 64 KKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQ Sbjct: 1 KKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQ 60 Query: 65 KLTTSDIDYALKLKNVEPLYGFHAQEFIPFR 95 KLTTSDIDYALKLKNVEPLYGFHAQEFI R Sbjct: 61 KLTTSDIDYALKLKNVEPLYGFHAQEFIRLR 91 >1TAF-B nrPDB Length = 70 Score = 109 bits (273), Expect = 3e-24, Method: Composition-based stats. Identities = 31/69 (44%), Positives = 49/69 (71%) Query: 9 LSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTT 68 L + + +ESMKV+AES+G+ + ++ + L ++VS ++K I QDA KFM+ KRQKL+ Sbjct: 2 LYGSSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSV 61 Query: 69 SDIDYALKL 77 DID +LK+ Sbjct: 62 RDIDMSLKV 70 >1KU5-A nrPDB Length = 70 Score = 41.3 bits (95), Expect = 0.002, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 30/63 (47%) Query: 14 LPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDY 73 LP + + G ++ E+ ++L + + EIA+ A++F R+ + DI Sbjct: 7 LPIAPVDRLIRKAGAERVSEQAAKVLAEYLEEYAIEIAKKAVEFARHAGRKTVKVEDIKL 66 Query: 74 ALK 76 A+K Sbjct: 67 AIK 69 >2PF4-A nrPDB Length = 589 Score = 37.4 bits (85), Expect = 0.019, Method: Composition-based stats. Identities = 52/298 (17%), Positives = 98/298 (32%), Gaps = 47/298 (15%) Query: 161 ATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQ 220 T+ L K D K A+ G P L + + H L + Sbjct: 323 MTQILPCIK-ELVSDANQHVKSALASVIMGLS-----PILGKDNTIE------HLLPLFL 370 Query: 221 QLYYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLI 280 E E + L + G+ Q+ I E + LA++ Sbjct: 371 AQLKDECPEVRLNIISN-----LDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIE 425 Query: 281 YLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQI 340 Y+ + L + ++ ++ LC+ VD+ +A+R+ A + ++ Sbjct: 426 YMPLLAGQLGVE---FFDEKLN-------------SLCMAWLVDHVYAIREAATSNLKKL 469 Query: 341 CKHFST--TTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAEL----GHDVIKTLILP 394 + F I ++ + + R ++ + L G D+ +LP Sbjct: 470 VEKFGKEWAHATIIPKVLA------MSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLP 523 Query: 395 R-LQQEGERIRSVLDGPVLSNIDRIGADHVQSLLLKHCAPVLAKLRPPPDNQDAYRAE 451 L+ G+ + +V V ++ +IG S L P+L KL D Y A+ Sbjct: 524 TVLRMAGDPVANVRFN-VAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQ 580 >3W4R-A nrPDB Length = 554 Score = 37.0 bits (84), Expect = 0.028, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 5/76 (6%) Query: 521 VSARAAAPPQP--SPPPTKFIVMSSSSSAPST-QQVLSLSTSAPGSG--STTTSPVTTTV 575 +SA PP+ + P ++ S+ S PS + + +TS P + STT+ P TT+ Sbjct: 397 MSAYTVPPPRSGNTTPTPEWARPPSTPSDPSEGDPIPTTTTSKPATSKPSTTSQPATTSR 456 Query: 576 PSVQPIVKLVSTATTA 591 P +P L + A TA Sbjct: 457 PEPKPTTSLPTPAPTA 472 >6A5L-b nrPDB Length = 106 Score = 35.1 bits (79), Expect = 0.090, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Query: 14 LPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDY 73 + +++ +A G+ +I + + ++ + +DA+ + KR+ +T D+ Y Sbjct: 33 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 92 Query: 74 ALKLKNVEPLYGF 86 ALK + LYGF Sbjct: 93 ALK-RQGRTLYGF 104 >3W99-B nrPDB Length = 105 Score = 35.1 bits (79), Expect = 0.090, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Query: 14 LPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDY 73 + +++ +A G+ +I + + ++ + +DA+ + KR+ +T D+ Y Sbjct: 32 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 91 Query: 74 ALKLKNVEPLYGF 86 ALK + LYGF Sbjct: 92 ALK-RQGRTLYGF 103 >1AOI-B nrPDB Length = 87 Score = 35.1 bits (79), Expect = 0.090, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Query: 14 LPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDY 73 + +++ +A G+ +I + + ++ + +DA+ + KR+ +T D+ Y Sbjct: 14 ITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVY 73 Query: 74 ALKLKNVEPLYGF 86 ALK + LYGF Sbjct: 74 ALK-RQGRTLYGF 85 >1B67-A nrPDB Length = 68 Score = 34.7 bits (78), Expect = 0.12, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 30/64 (46%) Query: 14 LPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDY 73 LP + + ++ G ++ ++ L + +EIA +A+K R+ + DI+ Sbjct: 3 LPIAPIGRIIKNAGAERVSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKTIKAEDIEL 62 Query: 74 ALKL 77 A K+ Sbjct: 63 ARKM 66 >4RCO-A nrPDB Length = 295 Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats. Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 6/79 (7%) Query: 519 TLVSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTV--- 575 T +S+ PQ +PP TK + + S P+ S AP + T+P +T V Sbjct: 18 TTLSSTKVEAPQSTPPSTK---IEAPQSKPNATTPPSTKVEAPQQTANATTPPSTKVTTP 74 Query: 576 PSVQPIVKLVSTATTAPPS 594 PS + ST + P S Sbjct: 75 PSTNTPQPMQSTKSDTPQS 93 >4LAC-A nrPDB Length = 258 Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 14/143 (9%) Query: 316 QLCLRPDVDNHWALRDFAARLVAQICKHFST--TTNNIQSRITKTFTKSWVDEKTPWTTR 373 LC+ VD+ +A+R+ A + ++ + F I ++ + + R Sbjct: 114 SLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLA------MSGDPNYLHR 167 Query: 374 YGSIAGLAEL----GHDVIKTLILPR-LQQEGERIRSVLDGPVLSNIDRIGADHVQSLLL 428 ++ + L G D+ +LP L+ G+ + +V V ++ +IG S L Sbjct: 168 MTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFN-VAKSLQKIGPILDNSTLQ 226 Query: 429 KHCAPVLAKLRPPPDNQDAYRAE 451 P+L KL D Y A+ Sbjct: 227 SEVKPILEKLTQDQDVDVKYFAQ 249 >3C5W-A nrPDB Length = 232 Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 14/143 (9%) Query: 316 QLCLRPDVDNHWALRDFAARLVAQICKHFST--TTNNIQSRITKTFTKSWVDEKTPWTTR 373 LC+ VD+ +A+R+ A + ++ + F I ++ + + R Sbjct: 88 SLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLA------MSGDPNYLHR 141 Query: 374 YGSIAGLAEL----GHDVIKTLILPR-LQQEGERIRSVLDGPVLSNIDRIGADHVQSLLL 428 ++ + L G D+ +LP L+ G+ + +V V ++ +IG S L Sbjct: 142 MTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFN-VAKSLQKIGPILDNSTLQ 200 Query: 429 KHCAPVLAKLRPPPDNQDAYRAE 451 P+L KL D Y A+ Sbjct: 201 SEVKPILEKLTQDQDVDVKYFAQ 223 >4XYI-B nrPDB Length = 103 Score = 34.3 bits (77), Expect = 0.19, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Query: 14 LPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDY 73 + +++ +A G+ +I + ++ + +DA+ + KR+ +T+ D+ Y Sbjct: 30 ITKPAIRRLARRGGVKRISALVYDETRAVLKLFLENVIRDAVTYTEHAKRKTVTSLDVVY 89 Query: 74 ALKLKNVEPLYGF 86 ALK + +YGF Sbjct: 90 ALK-RQGRTIYGF 101 >1BFM-A nrPDB Length = 69 Score = 34.3 bits (77), Expect = 0.19, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 29/63 (46%) Query: 14 LPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDY 73 LP + + + G ++ ++ L + ++IA +A+K R+ + DI+ Sbjct: 3 LPIAPIGRIIKDAGAERVSDDARITLAKILEEMGRDIASEAIKLARHAGRKTIKAEDIEL 62 Query: 74 ALK 76 A++ Sbjct: 63 AVR 65 >6GEN-C nrPDB Length = 103 Score = 33.9 bits (76), Expect = 0.20, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 38/73 (52%), Gaps = 1/73 (1%) Query: 14 LPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDY 73 + +++ +A G+ +I + + + ++ + +D++ + KR+ +T+ D+ Y Sbjct: 30 ITKPAIRRLARRGGVKRISGLIYEEVRAVLKSFLESVIRDSVTYTEHAKRKTVTSLDVVY 89 Query: 74 ALKLKNVEPLYGF 86 ALK + LYGF Sbjct: 90 ALK-RQGRTLYGF 101 >2OT8-A nrPDB Length = 852 Score = 33.6 bits (75), Expect = 0.31, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 60/161 (37%), Gaps = 22/161 (13%) Query: 225 KEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGV---RVNVVQNNLALLIY 281 I++ + C A + L ++ D ++LP + E + V ++ + +L Sbjct: 330 DTISDWNLRKCSAAALDVLANVYRD----ELLPHILPLLKELLFHHEWVVKESGILVLGA 385 Query: 282 LMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQIC 341 + M Y+ ELIP ++ C+ ++ +R W L +A +V+Q Sbjct: 386 IAEGCMQGMI-------PYLPELIPHLIQCLSDKKALVRSIT--CWTLSRYAHWVVSQPP 436 Query: 342 KHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAE 382 + ++ +T+ + K + A L E Sbjct: 437 DTY------LKPLMTELLKRILDSNKRVQEAACSAFATLEE 471 >2EYZ-A nrPDB Length = 304 Score = 33.2 bits (74), Expect = 0.36, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Query: 616 EGKGGPTSHPSPVP-PPASSPSPLSGSALCGGKQEAGDSPPPAPGTPKANGSQPNSGSPQ 674 EGK G PVP P+ S SAL GG QE G P P G +QP+ +P Sbjct: 176 EGKRGMI----PVPYVEKYRPASASVSALIGGNQE-GSHPQPLGGPEPGPYAQPSVNTPL 230 Query: 675 P 675 P Sbjct: 231 P 231 >2YFV-B nrPDB Length = 74 Score = 33.2 bits (74), Expect = 0.38, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 34/63 (53%) Query: 14 LPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDY 73 + +++ +A G+ +I + + + + ++ + +DA+ + KR+ +T+ D+ Y Sbjct: 6 ITKPAIRRLARRGGVKRISGLIYEEVRNVLKTFLESVIRDAVTYTEHAKRKTVTSLDVVY 65 Query: 74 ALK 76 ALK Sbjct: 66 ALK 68 >2LY8-A nrPDB Length = 121 Score = 33.2 bits (74), Expect = 0.41, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Query: 47 IKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGF 86 ++ + +D++ + KR+ +T+ D+ YALK + LYGF Sbjct: 81 LESVIRDSVTYTEHAKRKTVTSLDVVYALK-RQGRTLYGF 119 >2L5A-A nrPDB Length = 235 Score = 33.2 bits (74), Expect = 0.41, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Query: 47 IKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGF 86 ++ + +D++ + KR+ +T+ D+ YALK + LYGF Sbjct: 195 LESVIRDSVTYTEHAKRKTVTSLDVVYALK-RQGRTLYGF 233 >3VI4-A nrPDB Length = 632 Score = 32.8 bits (73), Expect = 0.48, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 7/63 (11%) Query: 596 APSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPP--ASSPSP-LSGSALCGGKQEAGD 652 AP G G Q+ +V P G GG S PS V P A+S +P GSAL GG+ G+ Sbjct: 373 APFG-GETQQGVVFVFPG---GPGGLGSKPSQVLQPLWAASHTPDFFGSALRGGRDLDGN 428 Query: 653 SPP 655 P Sbjct: 429 GYP 431 >4WK0-A nrPDB Length = 452 Score = 32.8 bits (73), Expect = 0.52, Method: Composition-based stats. Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 7/63 (11%) Query: 596 APSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPP--ASSPSP-LSGSALCGGKQEAGD 652 AP G G Q+ +V P G GG S PS V P A+S +P GSAL GG+ G+ Sbjct: 373 APFG-GETQQGVVFVFP---GGPGGLGSKPSQVLQPLWAASHTPDFFGSALRGGRDLDGN 428 Query: 653 SPP 655 P Sbjct: 429 GYP 431 >5L3D-A nrPDB Length = 852 Score = 32.0 bits (71), Expect = 0.88, Method: Composition-based stats. Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 7/67 (10%) Query: 615 GEGKGGPTSHPSPVPPPASSPSPLSGSALCG----GKQEAGDSPPPAPGTPKANGSQPNS 670 G G G + + S V A+ P+ LSG A G G++ PP P P S Sbjct: 24 GPGTAGGSENGSEV---AAQPAGLSGPAEVGPGAVGERTPRKKEPPRASPPGGLAEPPGS 80 Query: 671 GSPQPAP 677 PQ P Sbjct: 81 AGPQAGP 87 >1S5J-A nrPDB Length = 847 Score = 31.6 bits (70), Expect = 1.1, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 64/161 (39%), Gaps = 19/161 (11%) Query: 77 LKNVEPLYGFHAQEFIPFRFASGGG-RELYF--YEEKEVDLSDII----NTPLPRVPLDV 129 +K V+ + + ++F + G ++ YF Y++ +VD+ ++ NTP + Sbjct: 638 IKWVKTTFNLDLEVDKTYKFVAFSGLKKNYFGVYQDGKVDIKGMLVKKRNTPEFVKKVFN 697 Query: 130 CLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDG-PLKGKGQGATTA 188 +K +SI P ++ K + + +K + + G L + Sbjct: 698 EVKELMISIN----------SPNDVKEIKRKIVDVVKGSYEKLKNKGYNLDELAFKVMLS 747 Query: 189 DGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITE 229 KK P A L+L+P ++ L + +YY ++ Sbjct: 748 KPLDAYKKNTPQHVKAALQLRPFGVNVLPRDI-IYYVKVRS 787 >1Y2J-A nrPDB Length = 398 Score = 30.9 bits (68), Expect = 2.2, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Query: 142 QPAIPENPPPAPKEQQK---AEATE-PLKSAKPGQEEDGPLKGKGQGAT 186 Q IP++P P EQ + + + ++ +GP K +G+G + Sbjct: 351 QSMIPQSPSPPLDEQNRDCQGLMEKFQFELTLDEEDSEGPEK-EGEGHS 398 >5WDH-A nrPDB Length = 376 Score = 30.5 bits (67), Expect = 2.3, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%) Query: 511 GSIALPVQTLVSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSP 570 GS+ ++ R P +P+PPP + S LSLS S G+ + +P Sbjct: 18 GSLKGNIRVFCRVRPVLPGEPTPPPGLLLFPSGPGGPSDPPTRLSLSRSDERRGTLSGAP 77 >6HIY-Cj nrPDB Length = 257 Score = 30.5 bits (67), Expect = 2.7, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 41/110 (37%), Gaps = 13/110 (11%) Query: 83 LYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQ 142 +G + FA G + F EE+ V + I+ P P + DV + H ++ Sbjct: 152 FHGETTTRPVQVDFADVPGWYMDFVEERAVPFTGIVPPP-PSIGTDVPVDPHSYRLK--- 207 Query: 143 PAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGK--GQGATTADG 190 A P P P E LK G D P + + TT+DG Sbjct: 208 -AYPYYDAPNPPE----FVERLLK--DRGVLPDTPTETADVDKDPTTSDG 250 >2Z9I-A nrPDB Length = 324 Score = 30.1 bits (66), Expect = 3.4, Method: Composition-based stats. Identities = 14/30 (46%), Positives = 16/30 (53%) Query: 521 VSARAAAPPQPSPPPTKFIVMSSSSSAPST 550 V A AA PP SPPP + S +AP T Sbjct: 50 VIAAAAKPPLGSPPPKTTVTFSDGRTAPFT 79 >5ONS-A nrPDB Length = 181 Score = 29.7 bits (65), Expect = 4.5, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 19/39 (48%) Query: 268 RVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIP 306 V N + L +++ +K + +E ++++++P Sbjct: 7 EKENVSNCIQLKTSVIKGIKNQLIEQFPGIEPWLNQIMP 45 >4MHC-A nrPDB Length = 826 Score = 29.7 bits (65), Expect = 4.6, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 9/107 (8%) Query: 87 HAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIP 146 ++ E + + E+Y Y + +I PLP + ++ LS E C A+ Sbjct: 527 YSAEPLKVAVLTSNALEIYCYRTPDEVFESLIENPLPFI------HSYGLS-EACSTALY 579 Query: 147 ENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQG--ATTADGK 191 E K+ A + PG E P + G + Sbjct: 580 LACKFNKSEHIKSSALAFFSAGIPGVVEIKPKSSRESGSVPPISQNL 626 >6AH0-4 nrPDB Length = 424 Score = 29.3 bits (64), Expect = 4.9, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 4/39 (10%) Query: 66 LTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGREL 104 L+ D DYA+K+ N+ LYG + I AS + L Sbjct: 62 LSEEDADYAIKIMNMIKLYG----KPIRVNKASAHNKNL 96 >1IT8-A nrPDB Length = 582 Score = 29.3 bits (64), Expect = 6.3, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 6/96 (6%) Query: 145 IPENPPPAPKEQQKAEATEPLKSAKPGQE-EDGPLKGKGQGATTADGKGKEKKAPPLLEG 203 IP PP AP+EQ E L A+ +E ++ P+ QG+T D + A L Sbjct: 131 IP-TPPDAPREQAVKELEITLSRAREAEEIKEIPMNATIQGSTYTD---LRRYAARRLSS 186 Query: 204 APLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKR 239 + P + + + ++++ + + S A R Sbjct: 187 MNFEIHPIG-GVVPLLESYRFRDVVDIVISSKMALR 221 >6HQA-K nrPDB Length = 609 Score = 28.9 bits (63), Expect = 6.7, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 15/128 (11%) Query: 516 PVQTLVSARAAAPPQPSPP-----PTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSP 570 PV S + PQPS P P+ + + S A V + + +PG+ ST+T Sbjct: 373 PVTHRPSNVSQTMPQPSQPLQSSTPSSAVGRNQSPGATPVTSVNAAAKPSPGTSSTSTLI 432 Query: 571 VTTTVPSVQPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPP 630 + P ++ + PP A + + PT G G S PS P Sbjct: 433 NQHILKPAPPPTEIPARLQVKPPQPAA---------MKIPNRPTLLG-GSAISQPSLTTP 482 Query: 631 PASSPSPL 638 + P PL Sbjct: 483 VSIRPPPL 490 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.128 0.348 Lambda K H 0.267 0.0394 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,009,097 Number of Sequences: 36641 Number of extensions: 1072860 Number of successful extensions: 3069 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 54 Number of HSP's successfully gapped in prelim test: 80 Number of HSP's that attempted gapping in prelim test: 2612 Number of HSP's gapped (non-prelim): 311 length of query: 677 length of database: 10,336,785 effective HSP length: 104 effective length of query: 573 effective length of database: 6,526,121 effective search space: 3739467333 effective search space used: 3739467333 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 62 (28.5 bits)