BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P49753 (483 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3HLK-A nrPDB 892 0.0 3K2I-A nrPDB 567 e-162 6D2K-A nrPDB 32 0.55 2HDW-A nrPDB 30 2.1 2QZ6-A nrPDB 28 8.1 >3HLK-A nrPDB Length = 446 Score = 892 bits (2305), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/438 (99%), Positives = 437/438 (99%) Query: 46 GSPQLRQVGQIIRVPARMAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKG 105 GSPQLRQVGQIIRVPARMAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKG Sbjct: 1 GSPQLRQVGQIIRVPARMAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKG 60 Query: 106 ALFQAHARYRADTLGELDLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVKRDVRTPLA 165 ALFQAHARYRADTLGELDLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVKRDVRTPLA Sbjct: 61 ALFQAHARYRADTLGELDLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVKRDVRTPLA 120 Query: 166 VELEVLDGHDPDPGRLLCQTRHERYFLPPGVRREPVRVGRVRGTLFLPPEPGPFPGIVDM 225 VELEVLDGHDPDPGRLLCQTRHERYFLPPGVRREPVRVGRVRGTLFLPPEPGPFPGIVDM Sbjct: 121 VELEVLDGHDPDPGRLLCQTRHERYFLPPGVRREPVRVGRVRGTLFLPPEPGPFPGIVDM 180 Query: 226 FGTGGGLLEYRASLLAGKGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKG 285 FGTGGGLLEYRASLLAGKGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKG Sbjct: 181 FGTGGGLLEYRASLLAGKGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKG 240 Query: 286 PGVGLLGISKGGELCLSMASFLKGITAAVVINGSVANVGGTLHYKGETLPPVGVNRNRIK 345 PGVGLLGISKGGELCLSMASFLKGITAAVVINGSVANVGGTL YKGETLPPVGVNRNRIK Sbjct: 241 PGVGLLGISKGGELCLSMASFLKGITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIK 300 Query: 346 VTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQ 405 VTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQ Sbjct: 301 VTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQ 360 Query: 406 AHGRRKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQ 465 AHGRRKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQ Sbjct: 361 AHGRRKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQ 420 Query: 466 TFFHKHLGGHEGTIPSKV 483 TFFHKHLGGHEGTIPSKV Sbjct: 421 TFFHKHLGGHEGTIPSKV 438 >3K2I-A nrPDB Length = 422 Score = 567 bits (1461), Expect = e-162, Method: Compositional matrix adjust. Identities = 294/421 (69%), Positives = 340/421 (80%) Query: 63 MAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFQAHARYRADTLGEL 122 M+ATLILEP GRCCW+EPVRIAVRGLAPEQ VTLRASLRDEKGALF+AHARY AD GEL Sbjct: 2 MSATLILEPPGRCCWNEPVRIAVRGLAPEQRVTLRASLRDEKGALFRAHARYCADACGEL 61 Query: 123 DLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVKRDVRTPLAVELEVLDGHDPDPGRLL 182 DLERAPALGGSFAGLEPMGLLWALEPEKP R +KRDV+ P VELEVLDGHDP+PGRLL Sbjct: 62 DLERAPALGGSFAGLEPMGLLWALEPEKPFWRFLKRDVQIPFVVELEVLDGHDPEPGRLL 121 Query: 183 CQTRHERYFLPPGVRREPVRVGRVRGTLFLPPEPGPFPGIVDMFGTGGGLLEYRASLLAG 242 CQ +HER+FLPPGV R+ VR GRVR TLFLPP PGPFPGI+D+FG GGGLLEYRASLLAG Sbjct: 122 CQAQHERHFLPPGVWRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGLLEYRASLLAG 181 Query: 243 KGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLS 302 GFA +ALAYYN+EDLP M+ + LEYFEEA+ Y+L HP+VKGPG+GLLGIS G ++CLS Sbjct: 182 HGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLS 241 Query: 303 MASFLKGITAAVVINGSVANVGGTLHYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPL 362 MASFLK ++A V INGS + ++YK ++PP+G + RIKV G DIVD+ N+ + Sbjct: 242 MASFLKNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALV 301 Query: 363 EGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGH 422 G S IP+E+A+ L +VGQDDHNW+SE YA +RLQAHG+ KPQIICYP TGH Sbjct: 302 GGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGH 361 Query: 423 YIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGHEGTIPSK 482 YIEPPYFPLC ASLH L+ +IWGGEPRAH+ AQ DAWKQ+ FF KHLGG + T K Sbjct: 362 YIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGTQKTAVPK 421 Query: 483 V 483 + Sbjct: 422 L 422 >6D2K-A nrPDB Length = 288 Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust. Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 12/114 (10%) Query: 91 EQPVTLRASLRDEKGALFQAHARYRADTL-----GELDLERAPALGGSFAGLEPMGLLWA 145 E+ + +R L D LF + L L+L G F ++ + W Sbjct: 5 EKHMRIRVKLLDSTVELFDIEPKCDGQVLLTQVWKHLNLIECDYFGLEFKNVQSYWI-W- 62 Query: 146 LEPEKPLVRLVKRDVRTPLAVELEVLDGHDPDPGRLLCQTRHERYFLPPGVRRE 199 LEP KP++R V++ L + ++ PDPG+L Q + RY ++R+ Sbjct: 63 LEPMKPIIRQVRKPKNAVLRLAVKFF---PPDPGQL--QEEYTRYLFALQLKRD 111 >2HDW-A nrPDB Length = 367 Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust. Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 12/117 (10%) Query: 210 LFLPPEPG--PFPGIVDMFGTGGGLLEYRASL----LAGKGFAVMALA-YYNYED--LPK 260 L+LP G P IV + G G + E + L +A +GF +A Y E P+ Sbjct: 85 LYLPKNRGGDRLPAIV-IGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQPR 143 Query: 261 TMET--LHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITAAVV 315 + + ++ E F A++++ PEV +G++GI G + L+ + K + A V Sbjct: 144 NVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDKRVKAVVT 200 >2QZ6-A nrPDB Length = 358 Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Query: 213 PPEPGPFPGIVDMFGTGGGLLEYRASLLAGKGFAVMALAYYNY 255 PP+ P +V+ G+ GG Y A + KG V+ LA NY Sbjct: 299 PPQAAPLDTLVNKTGSTGGFGAYVA-YVPSKGLGVVILANKNY 340 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3HLK-A nrPDB 858 0.0 3K2I-A nrPDB 744 0.0 Sequences not found previously or not previously below threshold: 2HDW-A nrPDB 36 0.030 2JBW-A nrPDB 33 0.31 6ERI-Az nrPDB 31 1.5 5MLC-9 nrPDB 31 1.5 5KQU-A nrPDB 30 2.2 4HXF-B nrPDB 30 2.7 5MRF-W nrPDB 29 4.3 3J6B-W nrPDB 29 4.3 3JCO-J nrPDB 29 4.5 5D68-A nrPDB 29 6.2 4HDO-A nrPDB 29 6.2 2Q8N-A nrPDB 28 6.5 5KQW-A nrPDB 28 8.7 CONVERGED! >3HLK-A nrPDB Length = 446 Score = 858 bits (2217), Expect = 0.0, Method: Composition-based stats. Identities = 437/438 (99%), Positives = 437/438 (99%) Query: 46 GSPQLRQVGQIIRVPARMAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKG 105 GSPQLRQVGQIIRVPARMAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKG Sbjct: 1 GSPQLRQVGQIIRVPARMAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKG 60 Query: 106 ALFQAHARYRADTLGELDLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVKRDVRTPLA 165 ALFQAHARYRADTLGELDLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVKRDVRTPLA Sbjct: 61 ALFQAHARYRADTLGELDLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVKRDVRTPLA 120 Query: 166 VELEVLDGHDPDPGRLLCQTRHERYFLPPGVRREPVRVGRVRGTLFLPPEPGPFPGIVDM 225 VELEVLDGHDPDPGRLLCQTRHERYFLPPGVRREPVRVGRVRGTLFLPPEPGPFPGIVDM Sbjct: 121 VELEVLDGHDPDPGRLLCQTRHERYFLPPGVRREPVRVGRVRGTLFLPPEPGPFPGIVDM 180 Query: 226 FGTGGGLLEYRASLLAGKGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKG 285 FGTGGGLLEYRASLLAGKGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKG Sbjct: 181 FGTGGGLLEYRASLLAGKGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKG 240 Query: 286 PGVGLLGISKGGELCLSMASFLKGITAAVVINGSVANVGGTLHYKGETLPPVGVNRNRIK 345 PGVGLLGISKGGELCLSMASFLKGITAAVVINGSVANVGGTL YKGETLPPVGVNRNRIK Sbjct: 241 PGVGLLGISKGGELCLSMASFLKGITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIK 300 Query: 346 VTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQ 405 VTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQ Sbjct: 301 VTKDGYADIVDVLNSPLEGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQ 360 Query: 406 AHGRRKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQ 465 AHGRRKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQ Sbjct: 361 AHGRRKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQ 420 Query: 466 TFFHKHLGGHEGTIPSKV 483 TFFHKHLGGHEGTIPSKV Sbjct: 421 TFFHKHLGGHEGTIPSKV 438 >3K2I-A nrPDB Length = 422 Score = 744 bits (1920), Expect = 0.0, Method: Composition-based stats. Identities = 294/421 (69%), Positives = 340/421 (80%) Query: 63 MAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRASLRDEKGALFQAHARYRADTLGEL 122 M+ATLILEP GRCCW+EPVRIAVRGLAPEQ VTLRASLRDEKGALF+AHARY AD GEL Sbjct: 2 MSATLILEPPGRCCWNEPVRIAVRGLAPEQRVTLRASLRDEKGALFRAHARYCADACGEL 61 Query: 123 DLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVKRDVRTPLAVELEVLDGHDPDPGRLL 182 DLERAPALGGSFAGLEPMGLLWALEPEKP R +KRDV+ P VELEVLDGHDP+PGRLL Sbjct: 62 DLERAPALGGSFAGLEPMGLLWALEPEKPFWRFLKRDVQIPFVVELEVLDGHDPEPGRLL 121 Query: 183 CQTRHERYFLPPGVRREPVRVGRVRGTLFLPPEPGPFPGIVDMFGTGGGLLEYRASLLAG 242 CQ +HER+FLPPGV R+ VR GRVR TLFLPP PGPFPGI+D+FG GGGLLEYRASLLAG Sbjct: 122 CQAQHERHFLPPGVWRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGLLEYRASLLAG 181 Query: 243 KGFAVMALAYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLS 302 GFA +ALAYYN+EDLP M+ + LEYFEEA+ Y+L HP+VKGPG+GLLGIS G ++CLS Sbjct: 182 HGFATLALAYYNFEDLPNNMDNISLEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLS 241 Query: 303 MASFLKGITAAVVINGSVANVGGTLHYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPL 362 MASFLK ++A V INGS + ++YK ++PP+G + RIKV G DIVD+ N+ + Sbjct: 242 MASFLKNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVAFSGLVDIVDIRNALV 301 Query: 363 EGPDQKSFIPVERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPETGH 422 G S IP+E+A+ L +VGQDDHNW+SE YA +RLQAHG+ KPQIICYP TGH Sbjct: 302 GGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGTGH 361 Query: 423 YIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGHEGTIPSK 482 YIEPPYFPLC ASLH L+ +IWGGEPRAH+ AQ DAWKQ+ FF KHLGG + T K Sbjct: 362 YIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGTQKTAVPK 421 Query: 483 V 483 + Sbjct: 422 L 422 >2HDW-A nrPDB Length = 367 Score = 36.1 bits (82), Expect = 0.030, Method: Composition-based stats. Identities = 44/179 (24%), Positives = 72/179 (40%), Gaps = 22/179 (12%) Query: 208 GTLFLPPEPG--PFPGIVDMFGTGGGLLEYRASL----LAGKGFAVMAL-AYYNYED--L 258 L+LP G P IV + G G + E + L +A +GF +A Y E Sbjct: 83 ADLYLPKNRGGDRLPAIV-IGGPFGAVKEQSSGLYAQTMAERGFVTLAFDPSYTGESGGQ 141 Query: 259 PKTMET--LHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITAAVV- 315 P+ + + ++ E F A++++ PEV +G++GI G + L+ + K + A V Sbjct: 142 PRNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDKRVKAVVTS 201 Query: 316 -------INGSVANVGGTLHYKGETLPPVGVNRNRIKVTKDGYADIVDVLNSPLEGPDQ 367 + N TL + TL +G + R K + G N G Q Sbjct: 202 TMYDMTRVMSKGYNDSVTLEQRTRTLEQLG--QQRWKDAESGTPAYQPPYNELKGGEAQ 258 >2JBW-A nrPDB Length = 386 Score = 33.0 bits (74), Expect = 0.31, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 13/135 (9%) Query: 193 PPGVRREPVRVG-RVRGTLFLPPEPGPFPGIVDMFGTGGGLLE--YRASLLAGKGFAVMA 249 PP R E V G + + +P PGP P ++ + G E +L+ +G A Sbjct: 125 PPAERHELVVDGIPMPVYVRIPEGPGPHPAVIMLGGLESTKEESFQMENLVLDRGMATAT 184 Query: 250 L------AYYNYEDLPKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSM 303 + Y+ + E +Y ++ L ++ +G+LG S GG L Sbjct: 185 FDGPGQGEMFEYKRIAGDYE----KYTSAVVDLLTKLEAIRNDAIGVLGRSLGGNYALKS 240 Query: 304 ASFLKGITAAVVING 318 A+ + A + G Sbjct: 241 AACEPRLAACISWGG 255 >6ERI-Az nrPDB Length = 191 Score = 30.7 bits (68), Expect = 1.5, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 48/115 (41%), Gaps = 13/115 (11%) Query: 259 PKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITAAVVING 318 P ++ + +EY+ ++ L S ++ P L IS + S LK I A+V + Sbjct: 42 PTMLDRIEVEYYGTPVS-LKSIAQISTPDASSLLISPYDK------SSLKAIEKAIVTSQ 94 Query: 319 SVANVGGTLHYKGETLPPVGVNRNR------IKVTKDGYADIVDVLNSPLEGPDQ 367 + +LPP+ +R + K+ ++G + ++ L+ ++ Sbjct: 95 LGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEK 149 >5MLC-9 nrPDB Length = 271 Score = 30.7 bits (68), Expect = 1.5, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 48/115 (41%), Gaps = 13/115 (11%) Query: 259 PKTMETLHLEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKGITAAVVING 318 P ++ + +EY+ ++ L S ++ P L IS + S LK I A+V + Sbjct: 120 PTMLDRIEVEYYGTPVS-LKSIAQISTPDASSLLISPYDK------SSLKAIEKAIVTSQ 172 Query: 319 SVANVGGTLHYKGETLPPVGVNRNR------IKVTKDGYADIVDVLNSPLEGPDQ 367 + +LPP+ +R + K+ ++G + ++ L+ ++ Sbjct: 173 LGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEK 227 >5KQU-A nrPDB Length = 479 Score = 29.9 bits (66), Expect = 2.2, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 20/48 (41%) Query: 110 AHARYRADTLGELDLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVK 157 A RY AD L +L L P +F G MG + P K ++ Sbjct: 219 AFVRYCADELEKLILAEGPDTVAAFIGEPVMGTGGIIVPPKGYWEAIQ 266 >4HXF-B nrPDB Length = 622 Score = 29.9 bits (66), Expect = 2.7, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 21/107 (19%) Query: 227 GTGGGLLEYRASLLAGKGFAVMALAYYN-------YEDLP-KTMETLHLEYFEEAMN--- 275 G G +Y L+A KG+ ++ Y N ED + +E LE F++ +N Sbjct: 390 GMYGYYFKYEMQLMASKGYYIV---YVNPRGSNGYSEDFALRVLERTGLEDFQDILNGIE 446 Query: 276 -YLLSHPEVKGPGVGLLGISKGGEL---CLSMASFLKGITAAVVING 318 +L P+ +G+ GIS GG + L+ + K A + NG Sbjct: 447 EFLRLEPQADRERIGITGISYGGYMTNWALTQSDLFK---AGISENG 490 >5MRF-W nrPDB Length = 112 Score = 29.2 bits (64), Expect = 4.3, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 20/46 (43%) Query: 374 ERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPE 419 +RA + ++ VGQ H WK+ E R + Q + YP Sbjct: 40 KRANTLCMYCVGQISHIWKTHTAKEEIKPRQEEELSELDQRVLYPG 85 >3J6B-W nrPDB Length = 183 Score = 29.2 bits (64), Expect = 4.3, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 20/46 (43%) Query: 374 ERAESTFLFLVGQDDHNWKSEFYANEACKRLQAHGRRKPQIICYPE 419 +RA + ++ VGQ H WK+ E R + Q + YP Sbjct: 111 KRANTLCMYCVGQISHIWKTHTAKEEIKPRQEEELSELDQRVLYPG 156 >3JCO-J nrPDB Length = 405 Score = 29.2 bits (64), Expect = 4.5, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 8/100 (8%) Query: 6 LSPHPHSVVLRSEFKMASSPAVLRASRLYQWSLKSSAQFLGSPQLR-------QVGQIIR 58 + P+ + +E K+ S +R + +L +F+ +LR VG++I+ Sbjct: 19 IKPYFEQKIQETELKIRSKTENVRRLEAQRNALNDKVRFI-KDELRLLQEPGSYVGEVIK 77 Query: 59 VPARMAATLILEPAGRCCWDEPVRIAVRGLAPEQPVTLRA 98 + + + ++P G+ D I V+ L Q V LR+ Sbjct: 78 IVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRS 117 >5D68-A nrPDB Length = 486 Score = 28.8 bits (63), Expect = 6.2, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 6/64 (9%) Query: 138 EPMGLLWALEPEKPLVR-LVKRDVRTPLAVELEVLDGHDPDPGRLLCQTRHERYFLPPGV 196 E + L L+P++ + ++RDVR PL VE ++ DP +L RY L G Sbjct: 239 EILAELTNLDPQRETPQLFLRRDVRLPLEVEKQI-----EDPLAILILFDEARYNLLKGF 293 Query: 197 RREP 200 P Sbjct: 294 YTAP 297 >4HDO-A nrPDB Length = 322 Score = 28.8 bits (63), Expect = 6.2, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 6/64 (9%) Query: 138 EPMGLLWALEPEKPLVR-LVKRDVRTPLAVELEVLDGHDPDPGRLLCQTRHERYFLPPGV 196 E + L L+P++ + ++RDVR PL VE ++ DP +L RY L G Sbjct: 75 EILAELTNLDPQRETPQLFLRRDVRLPLEVEKQI-----EDPLAILILFDEARYNLLKGF 129 Query: 197 RREP 200 P Sbjct: 130 YTAP 133 >2Q8N-A nrPDB Length = 460 Score = 28.4 bits (62), Expect = 6.5, Method: Composition-based stats. Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 7/60 (11%) Query: 87 GLAPEQPVTLRASLRDEKGALFQAHARYRADTLGELDLERAPALGGSFAGLEPMGLLWAL 146 GL P + + + + EKG L R G LE P +GG F+ L P+GLL A+ Sbjct: 171 GLDPREHMLI--TTDPEKGFL-----RKLVKEEGFRSLEVPPGVGGRFSVLTPVGLLSAM 223 >5KQW-A nrPDB Length = 479 Score = 28.0 bits (61), Expect = 8.7, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 19/45 (42%) Query: 113 RYRADTLGELDLERAPALGGSFAGLEPMGLLWALEPEKPLVRLVK 157 RY AD L +L L P +F G MG + P + ++ Sbjct: 222 RYCADELEKLILAEGPDTVAAFIGEPVMGTGGIIPPPQGYWEAIQ 266 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.142 0.447 Lambda K H 0.267 0.0411 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,203,359 Number of Sequences: 36641 Number of extensions: 1033000 Number of successful extensions: 2286 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 2272 Number of HSP's gapped (non-prelim): 32 length of query: 483 length of database: 10,336,785 effective HSP length: 101 effective length of query: 382 effective length of database: 6,636,044 effective search space: 2534968808 effective search space used: 2534968808 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 61 (28.1 bits)