BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P49638 (278 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1OIP-A nrPDB 573 e-164 3W67-A nrPDB 497 e-141 4CJ6-A nrPDB 134 5e-32 4TLG-A nrPDB 100 1e-21 1O6U-A nrPDB 96 1e-20 4UYB-A nrPDB 92 4e-19 1AUA-A nrPDB 77 9e-15 3B7N-A nrPDB 72 4e-13 4MUO-A nrPDB 30 1.2 1PRQ-A nrPDB 30 1.3 1VPD-A nrPDB 30 1.6 3KSR-A nrPDB 28 5.5 4ILV-A nrPDB 27 7.2 >1OIP-A nrPDB Length = 278 Score = 573 bits (1477), Expect = e-164, Method: Compositional matrix adjust. Identities = 278/278 (100%), Positives = 278/278 (100%) Query: 1 MAEARSQPSAGPQLNALPDHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARD 60 MAEARSQPSAGPQLNALPDHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARD Sbjct: 1 MAEARSQPSAGPQLNALPDHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARD 60 Query: 61 FDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIA 120 FDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIA Sbjct: 61 FDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIA 120 Query: 121 HWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIA 180 HWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIA Sbjct: 121 HWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIA 180 Query: 181 AVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDI 240 AVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDI Sbjct: 181 AVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDI 240 Query: 241 LPLEYGGEEFSMEDICQEWTNFIMKSEDYLSSISESIQ 278 LPLEYGGEEFSMEDICQEWTNFIMKSEDYLSSISESIQ Sbjct: 241 LPLEYGGEEFSMEDICQEWTNFIMKSEDYLSSISESIQ 278 >3W67-A nrPDB Length = 266 Score = 497 bits (1280), Expect = e-141, Method: Compositional matrix adjust. Identities = 236/261 (90%), Positives = 250/261 (95%) Query: 18 PDHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWR 77 P+ SPLLQPGLA LRRR +EAGVP P PLTD+FLLRFLRARDFDLDLAWRL+KNYYKWR Sbjct: 6 PEFSPLLQPGLAELRRRVQEAGVPQTPQPLTDAFLLRFLRARDFDLDLAWRLMKNYYKWR 65 Query: 78 AECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSL 137 AECPE+SADL PRSI+GLLKAGYHGVLRSRD TGS+VLIYRIA+WDPKVFTAYDVFRVSL Sbjct: 66 AECPELSADLRPRSILGLLKAGYHGVLRSRDSTGSRVLIYRIAYWDPKVFTAYDVFRVSL 125 Query: 138 ITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLI 197 ITSELIVQEVETQRNG+KAIFDLEGWQ SHAFQITPSVAKKIAAVLTDSFPLKVRGIHLI Sbjct: 126 ITSELIVQEVETQRNGVKAIFDLEGWQVSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLI 185 Query: 198 NEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDILPLEYGGEEFSMEDICQ 257 NEPVIFHAVFSMIKPFLTEKIK+RIH+HGNNYK S+LQHFPDILP EYGG+EFSMEDICQ Sbjct: 186 NEPVIFHAVFSMIKPFLTEKIKDRIHLHGNNYKSSMLQHFPDILPREYGGKEFSMEDICQ 245 Query: 258 EWTNFIMKSEDYLSSISESIQ 278 EWTNFIMKSEDYLSSISE+IQ Sbjct: 246 EWTNFIMKSEDYLSSISETIQ 266 >4CJ6-A nrPDB Length = 317 Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 66/198 (33%), Positives = 112/198 (56%) Query: 50 SFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDP 109 F LRF+RAR F++ A+ LL+ Y +R + PE+ L P ++ ++AGY GVL SRD Sbjct: 94 GFFLRFIRARKFNVGRAYELLRGYVNFRLQYPELFDSLSPEAVRCTIEAGYPGVLSSRDK 153 Query: 110 TGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAF 169 G V+++ I +W + T ++ + E +++ ETQ NG I + +G+ A Sbjct: 154 YGRVVMLFNIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAA 213 Query: 170 QITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNY 229 + S +K+ +L DSFP + IH I++P F ++++KPFL K+ ER+ +HG++ Sbjct: 214 SLRTSDLRKMVDMLQDSFPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDL 273 Query: 230 KQSLLQHFPDILPLEYGG 247 + +ILP ++GG Sbjct: 274 SGFYQEIDENILPSDFGG 291 >4TLG-A nrPDB Length = 404 Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 28/247 (11%) Query: 19 DHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRA 78 D SP Q LA R ++ +P+ P D FLLR+LRAR+FDL + +L+ + ++R Sbjct: 8 DLSPQQQEALARFRENLQDL-LPILP-NADDYFLLRWLRARNFDLQKSEDMLRRHMEFRK 65 Query: 79 ECPEISADL------HPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVF----T 128 + DL P +I L +G L D G V I DPK + Sbjct: 66 Q-----QDLDNIVTWQPPEVIQLYDSG---GLCGYDYEGCPVYFNIIGSLDPKGLLLSAS 117 Query: 129 AYDVFRVSLITSELIVQEVE--TQRNGIK-----AIFDLEGWQFSHAFQITPSVAKKIAA 181 D+ R + EL++ E E TQ+ G K +FD+EG H ++ V ++ + Sbjct: 118 KQDMIRKRIKVCELLLHECELQTQKLGRKIEMALMVFDMEGLSLKHLWKPAVEVYQQFFS 177 Query: 182 VLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHF-PDI 240 +L ++P ++ + +I P +F F+++K F++E+ + +I + G+N+KQ L + PD Sbjct: 178 ILEANYPETLKNLIVIRAPKLFPVAFNLVKSFMSEETRRKIVILGDNWKQELTKFISPDQ 237 Query: 241 LPLEYGG 247 LP+E+GG Sbjct: 238 LPVEFGG 244 >1O6U-A nrPDB Length = 403 Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 122/243 (50%), Gaps = 20/243 (8%) Query: 19 DHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRA 78 D SP + LA R ++ +P P P D FLLR+LRAR FDL + +L+ + ++R Sbjct: 7 DLSPRQKEALAKFRENVQDV-LPALPNP-DDYFLLRWLRARSFDLQKSEAMLRKHVEFRK 64 Query: 79 E--CPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPK--VFTA--YDV 132 + I + P I L G G D G V I D K +F+A D+ Sbjct: 65 QKDIDNIISWQPPEVIQQYLSGGMCGY----DLDGCPVWYDIIGPLDAKGLLFSASKQDL 120 Query: 133 FRVSLITSELIVQEV--ETQRNG-----IKAIFDLEGWQFSHAFQITPSVAKKIAAVLTD 185 R + EL++QE +T + G I I+D EG H ++ + + + Sbjct: 121 LRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEE 180 Query: 186 SFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHF-PDILPLE 244 ++P ++ + ++ P +F +++IKPFL+E +++I + G N+K+ LL+H PD +P+E Sbjct: 181 NYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVE 240 Query: 245 YGG 247 YGG Sbjct: 241 YGG 243 >4UYB-A nrPDB Length = 401 Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/250 (28%), Positives = 125/250 (50%), Gaps = 34/250 (13%) Query: 19 DHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRA 78 D SP LA R ++ +P P P D FLLR+LRAR+FDL + LL+ Y ++R Sbjct: 8 DLSPKQAETLAKFRENVQDV-LPALPNP-DDYFLLRWLRARNFDLQKSEALLRKYMEFRK 65 Query: 79 ----------ECPEISADLHPRSIIGLLKAG---YHGVLRSRDPTGSKVLIYRIAHWDPK 125 + PE+ P + G + G ++ ++ DP G L++ + Sbjct: 66 TMDIDHILDWQPPEVIQKYMPGGLCGYDRDGCPVWYDIIGPLDPKG---LLFSV------ 116 Query: 126 VFTAYDVFRVSLITSELIVQE--VETQRNGIK-----AIFDLEGWQFSHAFQITPSVAKK 178 T D+ + + E I+ E ++T+R G K IFD EG H ++ V ++ Sbjct: 117 --TKQDLLKTKMRDCERILHECDLQTERLGKKIETIVMIFDCEGLGLKHFWKPLVEVYQE 174 Query: 179 IAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHF- 237 +L +++P ++ + ++ +F ++++KPFL+E + +I + GNN+K+ LL+ Sbjct: 175 FFGLLEENYPETLKFMLIVKATKLFPVGYNLMKPFLSEDTRRKIIVLGNNWKEGLLKLIS 234 Query: 238 PDILPLEYGG 247 P+ LP ++GG Sbjct: 235 PEELPAQFGG 244 >1AUA-A nrPDB Length = 296 Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 69/242 (28%), Positives = 109/242 (45%), Gaps = 26/242 (10%) Query: 25 QPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAE--CPE 82 + LA LR+ +AG L DS LLRFLRAR FD+ LA + +N KWR + Sbjct: 31 EKALAELRKLLEDAGFIER---LDDSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDT 87 Query: 83 ISADLHPRS---IIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLIT 139 I D H I YH + P + L H KV + + + + Sbjct: 88 ILQDFHYDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWE 147 Query: 140 SELIVQE------------VETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSF 187 E +VQ VET I DL+G S A+ + S ++ + + + + Sbjct: 148 YESVVQYRLPACSRAAGHLVETS----CTIMDLKGISISSAYSVM-SYVREASYISQNYY 202 Query: 188 PLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFP-DILPLEYG 246 P ++ ++IN P F F + KPFL +I + G++Y++ LL+ P + LP+++G Sbjct: 203 PERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFG 262 Query: 247 GE 248 G+ Sbjct: 263 GK 264 >3B7N-A nrPDB Length = 320 Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 37/229 (16%) Query: 47 LTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECP--------EISADLHPRSIIGLLK- 97 L DS LLRFLRAR FD++ + + +WR E E + + + I L K Sbjct: 59 LDDSTLLRFLRARKFDINASVEMFVETERWREEYGANTIIEDYENNKEAEDKERIKLAKM 118 Query: 98 --AGYHGVLRSRDPTGSKVL-------IYRIAHW---------DPKVFTAYDVFRVSLIT 139 YH V + P + L +Y+I + ++F Y V S Sbjct: 119 YPQYYHHVDKDGRPLYFEELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRA 178 Query: 140 SELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINE 199 LI + DL+G S+A+ + S K +A + + +P ++ ++I+ Sbjct: 179 GYLIETSC--------TVLDLKGISLSNAYHVL-SYIKDVADISQNYYPERMGKFYIIHS 229 Query: 200 PVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFP-DILPLEYGG 247 P F +F M+KPFL +I + G++YK+ LL+ P + LP++YGG Sbjct: 230 PFGFSTMFKMVKPFLDPVTVSKIFILGSSYKKELLKQIPIENLPVKYGG 278 >4MUO-A nrPDB Length = 328 Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 13/91 (14%) Query: 166 SHAFQITPSVAKKIAAVL---------TDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTE 216 +H ++TP K + V+ + PL +H + PV+ H V LTE Sbjct: 68 NHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLAILLHKLGFPVVVHGVSEDPTRVLTE 127 Query: 217 KIKERIH----MHGNNYKQSLLQHFPDILPL 243 I E + +HG + L +H P +P+ Sbjct: 128 TIFELMGITPTLHGGQAQAKLDEHQPVFMPV 158 >1PRQ-A nrPDB Length = 125 Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust. Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Query: 156 AIFDLEG--WQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHL 196 AI L+G W S F +TP+ + +A+ ++ P++ G L Sbjct: 20 AILGLDGNTWATSAGFAVTPAQGQTLASAFNNADPIRASGFDL 62 >1VPD-A nrPDB Length = 299 Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 11/110 (10%) Query: 95 LLKAGYHGVLRSRDPTGSKVLI---YRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQR 151 LLKAGY V+ R+P +I A + DV ++++ + V+EV Sbjct: 24 LLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVI-ITMLPNSPHVKEVALGE 82 Query: 152 NGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPV 201 NGI +EG + S+A + ++D+ LK +G+ +++ PV Sbjct: 83 NGI-----IEGAKPGTVLIDMSSIAPLASREISDA--LKAKGVEMLDAPV 125 >3KSR-A nrPDB Length = 290 Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust. Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 28/110 (25%) Query: 34 RAREAGVPLAPLPLTDSFLLR-----------FLRARDFDLDLAWRLLKNYYKWRAECPE 82 RAREA V L + +T F LR RA++ D +K Y A P Sbjct: 47 RAREA-VGLGCICMT--FDLRGHEGYASMRQSVTRAQNLDD------IKAAYDQLASLPY 97 Query: 83 ISADLHPRSIIGLLKAGYHGVLRSRD-PTGSKVL----IYRIAHWD-PKV 126 + D H +++GL GY L +R+ P L +Y+ AHWD PKV Sbjct: 98 V--DAHSIAVVGLSYGGYLSALLTRERPVEWLALRSPALYKDAHWDQPKV 145 >4ILV-A nrPDB Length = 248 Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust. Identities = 14/28 (50%), Positives = 15/28 (53%) Query: 22 PLLQPGLAALRRRAREAGVPLAPLPLTD 49 PL+ G AAL R VPLAP P D Sbjct: 3 PLVAGGGAALARDTGAGAVPLAPTPACD 30 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1OIP-A nrPDB 430 e-121 3W67-A nrPDB 390 e-109 1O6U-A nrPDB 285 1e-77 4UYB-A nrPDB 281 2e-76 4TLG-A nrPDB 273 4e-74 4CJ6-A nrPDB 254 3e-68 1AUA-A nrPDB 242 1e-64 3B7N-A nrPDB 221 3e-58 Sequences not found previously or not previously below threshold: 4M8Z-A nrPDB 63 2e-10 6R3V-A nrPDB 35 0.034 2YZ5-A nrPDB 32 0.22 1Y79-1 nrPDB 32 0.25 5LQD-A nrPDB 32 0.30 6MFV-A nrPDB 30 1.0 3RC8-A nrPDB 29 1.8 2UUU-A nrPDB 29 2.0 3NVL-A nrPDB 29 2.0 3I5A-A nrPDB 29 2.5 4UXV-A nrPDB 29 2.7 3HNO-A nrPDB 29 2.8 1I7L-A nrPDB 29 3.3 6FEC-u nrPDB 28 5.4 5WP5-A nrPDB 28 6.0 6II7-A nrPDB 27 9.5 5WP4-A nrPDB 27 9.6 >1OIP-A nrPDB Length = 278 Score = 430 bits (1106), Expect = e-121, Method: Composition-based stats. Identities = 278/278 (100%), Positives = 278/278 (100%) Query: 1 MAEARSQPSAGPQLNALPDHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARD 60 MAEARSQPSAGPQLNALPDHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARD Sbjct: 1 MAEARSQPSAGPQLNALPDHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARD 60 Query: 61 FDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIA 120 FDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIA Sbjct: 61 FDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIA 120 Query: 121 HWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIA 180 HWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIA Sbjct: 121 HWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIA 180 Query: 181 AVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDI 240 AVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDI Sbjct: 181 AVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDI 240 Query: 241 LPLEYGGEEFSMEDICQEWTNFIMKSEDYLSSISESIQ 278 LPLEYGGEEFSMEDICQEWTNFIMKSEDYLSSISESIQ Sbjct: 241 LPLEYGGEEFSMEDICQEWTNFIMKSEDYLSSISESIQ 278 >3W67-A nrPDB Length = 266 Score = 390 bits (1003), Expect = e-109, Method: Composition-based stats. Identities = 236/261 (90%), Positives = 250/261 (95%) Query: 18 PDHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWR 77 P+ SPLLQPGLA LRRR +EAGVP P PLTD+FLLRFLRARDFDLDLAWRL+KNYYKWR Sbjct: 6 PEFSPLLQPGLAELRRRVQEAGVPQTPQPLTDAFLLRFLRARDFDLDLAWRLMKNYYKWR 65 Query: 78 AECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSL 137 AECPE+SADL PRSI+GLLKAGYHGVLRSRD TGS+VLIYRIA+WDPKVFTAYDVFRVSL Sbjct: 66 AECPELSADLRPRSILGLLKAGYHGVLRSRDSTGSRVLIYRIAYWDPKVFTAYDVFRVSL 125 Query: 138 ITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLI 197 ITSELIVQEVETQRNG+KAIFDLEGWQ SHAFQITPSVAKKIAAVLTDSFPLKVRGIHLI Sbjct: 126 ITSELIVQEVETQRNGVKAIFDLEGWQVSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLI 185 Query: 198 NEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDILPLEYGGEEFSMEDICQ 257 NEPVIFHAVFSMIKPFLTEKIK+RIH+HGNNYK S+LQHFPDILP EYGG+EFSMEDICQ Sbjct: 186 NEPVIFHAVFSMIKPFLTEKIKDRIHLHGNNYKSSMLQHFPDILPREYGGKEFSMEDICQ 245 Query: 258 EWTNFIMKSEDYLSSISESIQ 278 EWTNFIMKSEDYLSSISE+IQ Sbjct: 246 EWTNFIMKSEDYLSSISETIQ 266 >1O6U-A nrPDB Length = 403 Score = 285 bits (730), Expect = 1e-77, Method: Composition-based stats. Identities = 72/243 (29%), Positives = 119/243 (48%), Gaps = 20/243 (8%) Query: 19 DHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRA 78 D SP + LA R ++ +P P P D FLLR+LRAR FDL + +L+ + ++R Sbjct: 7 DLSPRQKEALAKFRENVQDV-LPALPNP-DDYFLLRWLRARSFDLQKSEAMLRKHVEFRK 64 Query: 79 E--CPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVF----TAYDV 132 + I + P I L G G D G V I D K + D+ Sbjct: 65 QKDIDNIISWQPPEVIQQYLSGGMCGY----DLDGCPVWYDIIGPLDAKGLLFSASKQDL 120 Query: 133 FRVSLITSELIVQEV--ETQRNGIK-----AIFDLEGWQFSHAFQITPSVAKKIAAVLTD 185 R + EL++QE +T + G K I+D EG H ++ + + + Sbjct: 121 LRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEE 180 Query: 186 SFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHF-PDILPLE 244 ++P ++ + ++ P +F +++IKPFL+E +++I + G N+K+ LL+H PD +P+E Sbjct: 181 NYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVPVE 240 Query: 245 YGG 247 YGG Sbjct: 241 YGG 243 >4UYB-A nrPDB Length = 401 Score = 281 bits (719), Expect = 2e-76, Method: Composition-based stats. Identities = 73/243 (30%), Positives = 118/243 (48%), Gaps = 20/243 (8%) Query: 19 DHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRA 78 D SP LA R ++ +P P P D FLLR+LRAR+FDL + LL+ Y ++R Sbjct: 8 DLSPKQAETLAKFRENVQDV-LPALPNP-DDYFLLRWLRARNFDLQKSEALLRKYMEFRK 65 Query: 79 --ECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVF----TAYDV 132 + I P I + G G R G V I DPK T D+ Sbjct: 66 TMDIDHILDWQPPEVIQKYMPGGLCGYDRD----GCPVWYDIIGPLDPKGLLFSVTKQDL 121 Query: 133 FRVSLITSELIVQEV--ETQRNGIK-----AIFDLEGWQFSHAFQITPSVAKKIAAVLTD 185 + + E I+ E +T+R G K IFD EG H ++ V ++ +L + Sbjct: 122 LKTKMRDCERILHECDLQTERLGKKIETIVMIFDCEGLGLKHFWKPLVEVYQEFFGLLEE 181 Query: 186 SFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHF-PDILPLE 244 ++P ++ + ++ +F ++++KPFL+E + +I + GNN+K+ LL+ P+ LP + Sbjct: 182 NYPETLKFMLIVKATKLFPVGYNLMKPFLSEDTRRKIIVLGNNWKEGLLKLISPEELPAQ 241 Query: 245 YGG 247 +GG Sbjct: 242 FGG 244 >4TLG-A nrPDB Length = 404 Score = 273 bits (699), Expect = 4e-74, Method: Composition-based stats. Identities = 73/242 (30%), Positives = 124/242 (51%), Gaps = 18/242 (7%) Query: 19 DHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRA 78 D SP Q LA R ++ +P+ P D FLLR+LRAR+FDL + +L+ + ++R Sbjct: 8 DLSPQQQEALARFRENLQDL-LPILPN-ADDYFLLRWLRARNFDLQKSEDMLRRHMEFRK 65 Query: 79 ECP-EISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVF----TAYDVF 133 + + P +I L +G L D G V I DPK + D+ Sbjct: 66 QQDLDNIVTWQPPEVIQLYDSG---GLCGYDYEGCPVYFNIIGSLDPKGLLLSASKQDMI 122 Query: 134 RVSLITSELIVQEVE--TQRNGIK-----AIFDLEGWQFSHAFQITPSVAKKIAAVLTDS 186 R + EL++ E E TQ+ G K +FD+EG H ++ V ++ ++L + Sbjct: 123 RKRIKVCELLLHECELQTQKLGRKIEMALMVFDMEGLSLKHLWKPAVEVYQQFFSILEAN 182 Query: 187 FPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHF-PDILPLEY 245 +P ++ + +I P +F F+++K F++E+ + +I + G+N+KQ L + PD LP+E+ Sbjct: 183 YPETLKNLIVIRAPKLFPVAFNLVKSFMSEETRRKIVILGDNWKQELTKFISPDQLPVEF 242 Query: 246 GG 247 GG Sbjct: 243 GG 244 >4CJ6-A nrPDB Length = 317 Score = 254 bits (649), Expect = 3e-68, Method: Composition-based stats. Identities = 69/242 (28%), Positives = 121/242 (50%), Gaps = 9/242 (3%) Query: 15 NALPDHSPLLQPGLAALRRRARE---------AGVPLAPLPLTDSFLLRFLRARDFDLDL 65 + L + + + L+ + V F LRF+RAR F++ Sbjct: 50 DELNEREETREEAVRELQEMVQAQAASGEELAVAVAERVQEKDSGFFLRFIRARKFNVGR 109 Query: 66 AWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPK 125 A+ LL+ Y +R + PE+ L P ++ ++AGY GVL SRD G V+++ I +W + Sbjct: 110 AYELLRGYVNFRLQYPELFDSLSPEAVRCTIEAGYPGVLSSRDKYGRVVMLFNIENWQSQ 169 Query: 126 VFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTD 185 T ++ + E +++ ETQ NG I + +G+ A + S +K+ +L D Sbjct: 170 EITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASLRTSDLRKMVDMLQD 229 Query: 186 SFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDILPLEY 245 SFP + IH I++P F ++++KPFL K+ ER+ +HG++ + +ILP ++ Sbjct: 230 SFPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGFYQEIDENILPSDF 289 Query: 246 GG 247 GG Sbjct: 290 GG 291 >1AUA-A nrPDB Length = 296 Score = 242 bits (617), Expect = 1e-64, Method: Composition-based stats. Identities = 75/265 (28%), Positives = 117/265 (44%), Gaps = 31/265 (11%) Query: 6 SQPSAGPQLNALP----DHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDF 61 S P P +ALP + + LA LR+ +AG L DS LLRFLRAR F Sbjct: 9 SYPQNCPP-DALPGTPGNLDSAQEKALAELRKLLEDAGFIER---LDDSTLLRFLRARKF 64 Query: 62 DLDLAWRLLKNYYKWRAEC--PEISADLHPRS---IIGLLKAGYHGVLRSRDPTGSKVLI 116 D+ LA + +N KWR + I D H I YH + P + L Sbjct: 65 DVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPLIAKFYPQYYHKTDKDGRPVYFEELG 124 Query: 117 YRIAHWDPKVFTAYDVFRVSLITSELIVQE------------VETQRNGIKAIFDLEGWQ 164 H KV + + + + E +VQ VET I DL+G Sbjct: 125 AVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETS----CTIMDLKGIS 180 Query: 165 FSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHM 224 S A+ + S ++ + + + +P ++ ++IN P F F + KPFL +I + Sbjct: 181 ISSAYSVM-SYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFI 239 Query: 225 HGNNYKQSLLQHFP-DILPLEYGGE 248 G++Y++ LL+ P + LP+++GG+ Sbjct: 240 LGSSYQKELLKQIPAENLPVKFGGK 264 >3B7N-A nrPDB Length = 320 Score = 221 bits (563), Expect = 3e-58, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 31/263 (11%) Query: 12 PQL---NALP----DHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLD 64 PQ+ NALP + + + L R E L DS LLRFLRAR FD++ Sbjct: 20 PQICSPNALPGTPGNLTKEQEEALLQFRSILLEKNYKER---LDDSTLLRFLRARKFDIN 76 Query: 65 LAWRLLKNYYKWRAECP--------EISADLHPRSIIGL---LKAGYHGVLRSRDPTGSK 113 + + +WR E E + + + I L YH V + P + Sbjct: 77 ASVEMFVETERWREEYGANTIIEDYENNKEAEDKERIKLAKMYPQYYHHVDKDGRPLYFE 136 Query: 114 VLIYRIAHWDPKVFTAYDVFRVSLITSELIVQE---VETQRNGI-----KAIFDLEGWQF 165 L K+ T + R + EL ++R G + DL+G Sbjct: 137 ELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVLDLKGISL 196 Query: 166 SHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMH 225 S+A+ + S K +A + + +P ++ ++I+ P F +F M+KPFL +I + Sbjct: 197 SNAYHVL-SYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFIL 255 Query: 226 GNNYKQSLLQHFP-DILPLEYGG 247 G++YK+ LL+ P + LP++YGG Sbjct: 256 GSSYKKELLKQIPIENLPVKYGG 278 >4M8Z-A nrPDB Length = 351 Score = 62.8 bits (151), Expect = 2e-10, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 78/208 (37%), Gaps = 18/208 (8%) Query: 52 LLRFLRARDFDLDLAWRLLKNYYKWRAECP-----EISADLHPRSIIGLLKAGYHGVLRS 106 LR+LRA + L + WR E E D ++ + V+ Sbjct: 90 FLRYLRATKWVLKDCIDRITMTLAWRREFGISHLGEEHGDKITADLVAVENESGKQVILG 149 Query: 107 RDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQ-- 164 + +L + + K T++ + + E ++ + ++ + + D + + Sbjct: 150 YENDARPILYLKPGRQNTK--TSHRQVQHLVFMLERVIDFMPAGQDSLALLIDFKDYPDV 207 Query: 165 ---FSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKER 221 ++ V K++ +L +P ++ L N P + +I PF+ +E+ Sbjct: 208 PKVPGNSKIPPIGVGKEVLHILQTHYPERLGKALLTNIPWLAWTFLKLIHPFIDPLTREK 267 Query: 222 IHMHGNNYKQSLLQHFP-DILPLEYGGE 248 + + + +++ P + L YGG+ Sbjct: 268 LV-----FDEPFVKYVPKNELDSLYGGD 290 >6R3V-A nrPDB Length = 439 Score = 35.1 bits (79), Expect = 0.034, Method: Composition-based stats. Identities = 9/74 (12%), Positives = 29/74 (39%), Gaps = 2/74 (2%) Query: 164 QFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIH 223 + + + S + + ++ +++++ + + + KP ++ K ++I Sbjct: 128 GLTSDNKPSLSWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPLISFKFGQKIF 187 Query: 224 MHGNNYKQSLLQHF 237 NY L +H Sbjct: 188 YV--NYLSELSEHV 199 >2YZ5-A nrPDB Length = 267 Score = 32.4 bits (72), Expect = 0.22, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 15/125 (12%) Query: 8 PSAGPQLNALPDHSPLLQPGLAALRRRAREA----GVPLAPLPLTDSFLLRFLRARDFDL 63 P + +L AL P L +R RA++ G+ P T+ FL + LR FD Sbjct: 47 PESRMRLEAL----PFYLLALERVRERAQDLYVGIGLEADFHPGTEGFLAQLLRRYPFDY 102 Query: 64 DLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWD 123 + W + P+ + R + + +A + V ++ L + I H D Sbjct: 103 VIGSVHYLG--AWPLDHPDHQEEYAWRDLKEVFRAYFQEVEKAARSG----LFHAIGHLD 156 Query: 124 -PKVF 127 PK F Sbjct: 157 LPKKF 161 >1Y79-1 nrPDB Length = 680 Score = 32.4 bits (72), Expect = 0.25, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 10/68 (14%) Query: 17 LPDHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKW 76 +P + QP LA +R RA + F+ + RA D + +++ + Sbjct: 218 IPLLNTTQQPALAEMRDRATREKL----------FIAGWTRAEKNDANDTRAIIQRLVEI 267 Query: 77 RAECPEIS 84 RA+ + Sbjct: 268 RAQQATLL 275 >5LQD-A nrPDB Length = 465 Score = 32.0 bits (71), Expect = 0.30, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 45/131 (34%), Gaps = 12/131 (9%) Query: 13 QLNALPDHSPLLQPGLAALRRRAREAGVPLAPLPLT-DSFLLRFLRARDFDLDLAWRLLK 71 +L AL H P + LA LR + + +LR L A LL Sbjct: 244 ELRALA-HRPQVDERLARLREEVGDRKTIVRVDRTELSKNILRGLLAYR-------ELLT 295 Query: 72 NYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYD 131 + +WR +++ R + +A V ++ + A W P + + D Sbjct: 296 VHPEWRDRVVHLASAYPSRQDLAAYRAYTASVTELAAEINAE---FGTADWQPVLVSVED 352 Query: 132 VFRVSLITSEL 142 F SL L Sbjct: 353 DFTRSLAAYRL 363 >6MFV-A nrPDB Length = 653 Score = 30.1 bits (66), Expect = 1.0, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 10/120 (8%) Query: 113 KVLIYRIAHWDPKVFTAYDVFRVSLIT------SELIVQEVETQRNGIKAIFDLEGWQFS 166 Y +A K T + ++ +T LI++ E G +F+ + F Sbjct: 166 PEEAYSLAREKEKSMTPEEFAKLYKLTFGHPLMLNLILESSEILATGKDTVFN---FLFE 222 Query: 167 HAFQITPSVAKKIAAVLTDS-FPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMH 225 +Q+ K + ++L+ P++ GI + + F ++S++K L EK E+ +H Sbjct: 223 EVYQMLNEEEKDLLSILSLFDEPIEYEGIKFLYDRNPFVPLYSLMKKGLIEKKGEKYFVH 282 >3RC8-A nrPDB Length = 677 Score = 29.3 bits (64), Expect = 1.8, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 19/45 (42%) Query: 45 LPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAECPEISADLHP 89 P S LL+F R + L + L+ Y KW P+ DL Sbjct: 538 QPFVCSSLLQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKDLMD 582 >2UUU-A nrPDB Length = 584 Score = 29.3 bits (64), Expect = 2.0, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 2/127 (1%) Query: 74 YKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVF 133 +R P + +L + G H +L S G H P+ Y Sbjct: 265 VSFRTVTPTGTLELRNGARSGAGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGFL 324 Query: 134 RVSLITSELIVQEVETQRNGIKAI--FDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKV 191 + + +Q++ + I +D E Q S A++ + + + + + + Sbjct: 325 FPTFAHAVSALQQIRSSEVIPTMIRVYDPEETQLSFAWKPSKGAVSEFTSAMVKKYLHYI 384 Query: 192 RGIHLIN 198 R N Sbjct: 385 RSFDFKN 391 >3NVL-A nrPDB Length = 571 Score = 29.3 bits (64), Expect = 2.0, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 34/103 (33%), Gaps = 10/103 (9%) Query: 20 HSPLLQPGLAALRRRAREAG---------VPLAPLPLTDSFLLRFLRARDFDLDLAWRLL 70 + L+ LA LR +A V + S + R RA+ A++ Sbjct: 195 FTDELEEVLAKLREGGCDARIASGGGRMFVTMDRYEADWSIVERGWRAQVLGEGRAFKSA 254 Query: 71 KNYY-KWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGS 112 + K+R E IS +P +I G + D Sbjct: 255 REALTKFREEDANISDQYYPPFVIAGDDGRPIGTIEDGDAVLC 297 >3I5A-A nrPDB Length = 334 Score = 28.9 bits (63), Expect = 2.5, Method: Composition-based stats. Identities = 10/15 (66%), Positives = 11/15 (73%) Query: 238 PDILPLEYGGEEFSM 252 P LP YGGEEF+M Sbjct: 241 PSDLPARYGGEEFAM 255 >4UXV-A nrPDB Length = 545 Score = 28.9 bits (63), Expect = 2.7, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 27/85 (31%), Gaps = 5/85 (5%) Query: 73 YYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDV 132 + KWR E EI P+ L A + D K + H D + A Sbjct: 47 FEKWREEWDEIVTAHMPKVEELLYDA-----EENADKYRFKKANQVLVHIDDLLTAAESS 101 Query: 133 FRVSLITSELIVQEVETQRNGIKAI 157 L +V E R I+ + Sbjct: 102 IEKILREISDLVTSEEKSREEIEQV 126 >3HNO-A nrPDB Length = 419 Score = 28.9 bits (63), Expect = 2.8, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 44/116 (37%), Gaps = 14/116 (12%) Query: 161 EGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHA-VFSMIKPFLTEKIK 219 EG + + + + + + + + + + V F + + P Sbjct: 284 EGLGLKYHWGVADYLQRAARHIASKTDVE--QAYAMGQAAVEFAVQGHNSVMP-----TI 336 Query: 220 ERIHMHGNNYKQSLLQH-----FPDILPLEYGGEE-FSMEDICQEWTNFIMKSEDY 269 ERI +K + Q ++P + E+ F + D+C+E+ +++ EDY Sbjct: 337 ERISARPYQWKVGMAQLSQVANVEKMMPENFITEDGFGITDLCREYLAPLIEGEDY 392 >1I7L-A nrPDB Length = 309 Score = 28.5 bits (62), Expect = 3.3, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 3/68 (4%) Query: 197 INEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFPDILPLEYGG---EEFSME 253 I V ++ +PF+ K R+ GNNYK + G E+ +M Sbjct: 180 IASVVALTQTYATAEPFIDAKYDIRVQKIGNNYKAYMRTSISGNWKTNTGSAMLEQIAMS 239 Query: 254 DICQEWTN 261 D + W + Sbjct: 240 DRYKLWVD 247 >6FEC-u nrPDB Length = 636 Score = 27.7 bits (60), Expect = 5.4, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 9/85 (10%) Query: 8 PSAGPQLNALPDHSPLLQPGLAALRRRAREAGVPLAPLPLTDSFLLRFLRARDFDLDLAW 67 P P+LN P +P A+ + R A + P+ + AR+ +++ Sbjct: 353 PPQRPKLNLKPRSTPKEDDSSASTSQSTRAASIFGGAKPVDTA-------AREREVE--E 403 Query: 68 RLLKNYYKWRAECPEISADLHPRSI 92 RL K K + + E + PR Sbjct: 404 RLQKEQEKLQRQLDEPKLERRPRER 428 >5WP5-A nrPDB Length = 491 Score = 27.7 bits (60), Expect = 6.0, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 8/78 (10%) Query: 143 IVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPL--------KVRGI 194 + + + GI ++ + A + SV ++A T ++P + + Sbjct: 300 MAENFDVHVVGIDLSVNMISFALERAIGLKCSVEFEVADCTTKTYPDNSFDVIYSRDTIL 359 Query: 195 HLINEPVIFHAVFSMIKP 212 H+ ++P +F F +KP Sbjct: 360 HIQDKPALFRTFFKWLKP 377 >6II7-A nrPDB Length = 367 Score = 27.0 bits (58), Expect = 9.5, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 39/99 (39%), Gaps = 6/99 (6%) Query: 126 VFTAYDVFRVSLITSELIVQEVET-QRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLT 184 + D+ S +++ V++ + I+ ++D G + S + +T Sbjct: 270 LVKEKDILLEVCPISNVLLNNVKSMDTHPIRMLYD-AGVKVS----VNSDDPGMFLTNIT 324 Query: 185 DSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIH 223 D++ ++ + ++++ K F+ IK +I Sbjct: 325 DNYEELYTHLNFTLADFMKMNLWAVQKSFVDPDIKNKII 363 >5WP4-A nrPDB Length = 491 Score = 27.0 bits (58), Expect = 9.6, Method: Composition-based stats. Identities = 14/78 (17%), Positives = 33/78 (42%), Gaps = 8/78 (10%) Query: 143 IVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPL--------KVRGI 194 + ++ + GI ++ + A ++ SV ++A T +P + + Sbjct: 300 MAEKFDVHVVGIDLSVNMISFALERAIGLSCSVEFEVADCTTKHYPDNSFDVIYSRDTIL 359 Query: 195 HLINEPVIFHAVFSMIKP 212 H+ ++P +F F +KP Sbjct: 360 HIQDKPALFRTFFKWLKP 377 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.132 0.349 Lambda K H 0.267 0.0403 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,310,839 Number of Sequences: 36641 Number of extensions: 400873 Number of successful extensions: 1198 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 1139 Number of HSP's gapped (non-prelim): 45 length of query: 278 length of database: 10,336,785 effective HSP length: 96 effective length of query: 182 effective length of database: 6,819,249 effective search space: 1241103318 effective search space used: 1241103318 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 58 (27.0 bits)