BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P49450 (140 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3R45-A nrPDB 280 2e-76 6BUZ-A nrPDB 280 2e-76 3AN2-A nrPDB 280 2e-76 3NQJ-A nrPDB 164 1e-41 5ZBX-A nrPDB 159 5e-40 3WTP-E nrPDB 112 6e-26 3W98-A nrPDB 110 3e-25 6FTX-E nrPDB 109 4e-25 5MLU-A nrPDB 109 4e-25 4Z5T-A nrPDB 107 2e-24 4KUD-A nrPDB 103 4e-23 5AY8-A nrPDB 103 4e-23 5BO0-A nrPDB 99 4e-22 2YFW-A nrPDB 97 2e-21 2YFV-A nrPDB 96 7e-21 2L5A-A nrPDB 91 2e-19 2LY8-A nrPDB 62 1e-10 4N78-F nrPDB 28 0.94 1B67-A nrPDB 28 0.97 6GAZ-An nrPDB 27 4.0 5OY4-X nrPDB 26 5.9 3DKB-A nrPDB 26 7.0 2FRX-A nrPDB 25 9.1 >3R45-A nrPDB Length = 156 Score = 280 bits (716), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 140/140 (100%), Positives = 140/140 (100%) Query: 1 MGPRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHL 60 MGPRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHL Sbjct: 17 MGPRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHL 76 Query: 61 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVT 120 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVT Sbjct: 77 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVT 136 Query: 121 LFPKDVQLARRIRGLEEGLG 140 LFPKDVQLARRIRGLEEGLG Sbjct: 137 LFPKDVQLARRIRGLEEGLG 156 >6BUZ-A nrPDB Length = 160 Score = 280 bits (715), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 140/140 (100%), Positives = 140/140 (100%) Query: 1 MGPRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHL 60 MGPRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHL Sbjct: 21 MGPRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHL 80 Query: 61 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVT 120 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVT Sbjct: 81 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVT 140 Query: 121 LFPKDVQLARRIRGLEEGLG 140 LFPKDVQLARRIRGLEEGLG Sbjct: 141 LFPKDVQLARRIRGLEEGLG 160 >3AN2-A nrPDB Length = 143 Score = 280 bits (715), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 140/140 (100%), Positives = 140/140 (100%) Query: 1 MGPRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHL 60 MGPRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHL Sbjct: 4 MGPRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHL 63 Query: 61 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVT 120 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVT Sbjct: 64 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVT 123 Query: 121 LFPKDVQLARRIRGLEEGLG 140 LFPKDVQLARRIRGLEEGLG Sbjct: 124 LFPKDVQLARRIRGLEEGLG 143 >3NQJ-A nrPDB Length = 82 Score = 164 bits (415), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 81/81 (100%), Positives = 81/81 (100%) Query: 60 LLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRV 119 LLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRV Sbjct: 2 LLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRV 61 Query: 120 TLFPKDVQLARRIRGLEEGLG 140 TLFPKDVQLARRIRGLEEGLG Sbjct: 62 TLFPKDVQLARRIRGLEEGLG 82 >5ZBX-A nrPDB Length = 141 Score = 159 bits (401), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 87/132 (65%), Positives = 97/132 (73%), Gaps = 7/132 (5%) Query: 5 RRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGW--LKEIRKLQKSTHLLI 62 R+S +APR++ T + P+ G H R R G L+EIR+ QKST LLI Sbjct: 12 RKSTGGKAPRKQ----LATKAARKSAPATGGVKKPH-RYRPGTVALREIRRYQKSTELLI 66 Query: 63 RKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLF 122 RKLPF RL REIC FTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHA RVT+ Sbjct: 67 RKLPFQRLVREICQDFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAKRVTIM 126 Query: 123 PKDVQLARRIRG 134 PKD+QLARRIRG Sbjct: 127 PKDIQLARRIRG 138 >3WTP-E nrPDB Length = 140 Score = 112 bits (279), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 68/132 (51%), Positives = 83/132 (62%), Gaps = 9/132 (6%) Query: 5 RRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGW--LKEIRKLQKSTHLLI 62 R+S +APR++ T + PS G H R R G L+EIR+ QKST LLI Sbjct: 13 RKSTGGKAPRKQ----LATKAARKSAPSTGGVKKPH-RYRPGTVALREIRRYQKSTELLI 67 Query: 63 RKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLF 122 RKLPF RL REI F D +Q+ A+ ALQEA+EA+LV LFED L +HA RVT+ Sbjct: 68 RKLPFQRLVREIAQDFK--TDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIM 125 Query: 123 PKDVQLARRIRG 134 PKD+QLARRIRG Sbjct: 126 PKDIQLARRIRG 137 >3W98-A nrPDB Length = 112 Score = 110 bits (274), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 62/112 (55%), Positives = 73/112 (65%), Gaps = 5/112 (4%) Query: 25 GPSRRGPSLGASSHQHSRRRQGW--LKEIRKLQKSTHLLIRKLPFSRLAREICVKFTRGV 82 G P+ G H R R G L+EIR+ QKST LLIRKLPF RL REI F Sbjct: 1 GSHMSAPATGGVKKPH-RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK--T 57 Query: 83 DFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQLARRIRG 134 D +Q+ A++ALQEA EA+LV LFED L +HA RVT+ PKD+QLARRIRG Sbjct: 58 DLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 109 >6FTX-E nrPDB Length = 110 Score = 109 bits (272), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 55/87 (63%), Positives = 66/87 (75%), Gaps = 2/87 (2%) Query: 48 LKEIRKLQKSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFE 107 L+EIR+ QKST LLIRKLPF RL REI F D +Q+ A++ALQEA+EA+LV LFE Sbjct: 23 LREIRRYQKSTELLIRKLPFQRLVREIAQDF--KTDLRFQSSAVMALQEASEAYLVALFE 80 Query: 108 DAYLLTLHAGRVTLFPKDVQLARRIRG 134 D L +HA RVT+ PKD+QLARRIRG Sbjct: 81 DTNLCAIHAKRVTIMPKDIQLARRIRG 107 >5MLU-A nrPDB Length = 97 Score = 109 bits (272), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 55/87 (63%), Positives = 66/87 (75%), Gaps = 2/87 (2%) Query: 48 LKEIRKLQKSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFE 107 L+EIR+ QKST LLIRKLPF RL REI F D +Q+ A++ALQEA+EA+LV LFE Sbjct: 10 LREIRRYQKSTELLIRKLPFQRLVREIAQDF--KTDLRFQSSAVMALQEASEAYLVALFE 67 Query: 108 DAYLLTLHAGRVTLFPKDVQLARRIRG 134 D L +HA RVT+ PKD+QLARRIRG Sbjct: 68 DTNLCAIHAKRVTIMPKDIQLARRIRG 94 >4Z5T-A nrPDB Length = 138 Score = 107 bits (266), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 54/87 (62%), Positives = 64/87 (73%), Gaps = 2/87 (2%) Query: 48 LKEIRKLQKSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFE 107 L+EIR+ QKST LLIRKLPF RL REI F D +Q+ A+ ALQEA+EA+LV L E Sbjct: 51 LREIRRYQKSTELLIRKLPFQRLVREIAQDF--NTDLRFQSAAVGALQEASEAYLVGLLE 108 Query: 108 DAYLLTLHAGRVTLFPKDVQLARRIRG 134 D L +HA RVT+ PKD+QLARRIRG Sbjct: 109 DTNLCAIHAKRVTIMPKDIQLARRIRG 135 >4KUD-A nrPDB Length = 136 Score = 103 bits (256), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 59/124 (47%), Positives = 74/124 (59%), Gaps = 14/124 (11%) Query: 11 EAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHLLIRKLPFSRL 70 +A R+ +PS P R P A L+EIR+ QKST LLIRKLPF RL Sbjct: 24 KAARKSAPSTGGVKKPHRYKPGTVA------------LREIRRFQKSTELLIRKLPFQRL 71 Query: 71 AREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQLAR 130 REI F D +Q+ A+ ALQE+ EA+LV LFED L +HA RVT+ KD++LAR Sbjct: 72 VREIAQDFK--TDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLAR 129 Query: 131 RIRG 134 R+RG Sbjct: 130 RLRG 133 >5AY8-A nrPDB Length = 139 Score = 103 bits (256), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 62/125 (49%), Positives = 79/125 (63%), Gaps = 9/125 (7%) Query: 11 EAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWL--KEIRKLQKSTHLLIRKLPFS 68 +APR+ P T +R P G H R + G L +EIRK QKST LL+RKLPF Sbjct: 18 QAPRK----PLATKAAGKRAPPTGGIKKPH-RYKPGTLALREIRKYQKSTQLLLRKLPFQ 72 Query: 69 RLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQL 128 RL REI + D +Q+ A+ ALQEA+EA+LV LFED L +HA RVT+ P+D+QL Sbjct: 73 RLVREIAQAIS--PDLRFQSAAIGALQEASEAYLVQLFEDTNLCAIHARRVTIMPRDMQL 130 Query: 129 ARRIR 133 ARR+R Sbjct: 131 ARRLR 135 >5BO0-A nrPDB Length = 80 Score = 99.4 bits (246), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 50/79 (63%), Positives = 59/79 (74%), Gaps = 2/79 (2%) Query: 56 KSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLH 115 KST LLIRKLPF RL REI F D +Q+ A++ALQEA+EA+LV LFED L +H Sbjct: 1 KSTELLIRKLPFQRLVREIAQDF--KTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIH 58 Query: 116 AGRVTLFPKDVQLARRIRG 134 A RVT+ PKD+QLARRIRG Sbjct: 59 AKRVTIMPKDIQLARRIRG 77 >2YFW-A nrPDB Length = 92 Score = 97.4 bits (241), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 49/88 (55%), Positives = 65/88 (73%), Gaps = 1/88 (1%) Query: 48 LKEIRKLQKSTHLLIRKLPFSRLAREICVKFTRGVD-FNWQAQALLALQEAAEAFLVHLF 106 L EIRK Q+ST LLI ++PF+RL +E+ +FT + WQ+ A++ALQEA+EA+LV L Sbjct: 2 LAEIRKYQRSTDLLISRMPFARLVKEVTDQFTTESEPLRWQSMAIMALQEASEAYLVGLL 61 Query: 107 EDAYLLTLHAGRVTLFPKDVQLARRIRG 134 E LL LHA R+T+ KD+QLARRIRG Sbjct: 62 EHTNLLALHAKRITIMRKDMQLARRIRG 89 >2YFV-A nrPDB Length = 100 Score = 95.5 bits (236), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 48/87 (55%), Positives = 64/87 (73%), Gaps = 1/87 (1%) Query: 48 LKEIRKLQKSTHLLIRKLPFSRLAREICVKFTRGVD-FNWQAQALLALQEAAEAFLVHLF 106 L EIRK Q+ST LLI ++PF+RL +E+ +FT + WQ+ A++ALQEA+EA+LV L Sbjct: 14 LAEIRKYQRSTDLLISRMPFARLVKEVTDQFTTESEPLRWQSMAIMALQEASEAYLVGLL 73 Query: 107 EDAYLLTLHAGRVTLFPKDVQLARRIR 133 E LL LHA R+T+ KD+QLARRIR Sbjct: 74 EHTNLLALHAKRITIMRKDMQLARRIR 100 >2L5A-A nrPDB Length = 235 Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 43/76 (56%), Positives = 57/76 (75%), Gaps = 1/76 (1%) Query: 60 LLIRKLPFSRLAREICVKFT-RGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGR 118 LLI K+PF+RL +E+ +FT + D WQ+ A++ALQEA+EA+LV L E LL LHA R Sbjct: 10 LLISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAKR 69 Query: 119 VTLFPKDVQLARRIRG 134 +T+ KD+QLARRIRG Sbjct: 70 ITIMKKDMQLARRIRG 85 >2LY8-A nrPDB Length = 121 Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 9/76 (11%) Query: 61 LIRKLPFSRLAREICVKFT-RGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRV 119 LI K+PF+RL +E+ +FT + D WQ+ A++ALQEA+EA+LV L E LL LH Sbjct: 1 LISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALH---- 56 Query: 120 TLFPKDVQLARRIRGL 135 L P+ ++RI GL Sbjct: 57 -LVPRG---SKRISGL 68 >4N78-F nrPDB Length = 514 Score = 28.5 bits (62), Expect = 0.94, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 18/35 (51%) Query: 8 RKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42 R P P PSPT PS++ P AS +Q +R Sbjct: 206 RPPVVPNDYVPSPTRNMAPSQQSPVRTASVNQRNR 240 >1B67-A nrPDB Length = 68 Score = 28.5 bits (62), Expect = 0.97, Method: Compositional matrix adjust. Identities = 15/44 (34%), Positives = 25/44 (56%) Query: 89 QALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQLARRI 132 A +AL + E + +A L HAGR T+ +D++LAR++ Sbjct: 23 DARIALAKVLEEMGEEIASEAVKLAKHAGRKTIKAEDIELARKM 66 >6GAZ-An nrPDB Length = 199 Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Query: 28 RRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHLLIRKLPFSRLAREICVKFTRGVDFNWQ 87 R P + + RRR+ + RKL K T L RK+ RL R+ VKF R + WQ Sbjct: 120 RDTPQMQCKNILKIRRRKMNHHKYRKLVKRTRFLRRKVREGRL-RQKQVKFERDLKRIWQ 178 Query: 88 AQAL 91 L Sbjct: 179 KAGL 182 >5OY4-X nrPDB Length = 279 Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 26/49 (53%) Query: 20 PTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHLLIRKLPFS 68 P P GP RRG GA++ + ++R+G E R H L+++L S Sbjct: 161 PQPLSGPCRRGWLRGAAASRRLQQRRGSQPETRTGDDDPHRLLQQLVLS 209 >3DKB-A nrPDB Length = 390 Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 27/86 (31%) Query: 41 SRRRQGWLKEIRKL----------------------QKSTHLLIRKLPFSRLAREICVKF 78 S+++ W +E+RKL + T L++RK FS L Sbjct: 99 SQKKLNWCREVRKLVALKTNGDGNCLMHATSQYMWGVQDTDLVLRKALFSTLKE----TD 154 Query: 79 TRGVDFNWQAQALLALQEAAEAFLVH 104 TR F WQ ++L + QE E L + Sbjct: 155 TRNFKFRWQLESLKS-QEFVETGLCY 179 >2FRX-A nrPDB Length = 479 Score = 25.4 bits (54), Expect = 9.1, Method: Compositional matrix adjust. Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Query: 49 KEIRKLQKSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQALLAL 94 KE+ LI K+ FSRL ++ +G + WQ +A++AL Sbjct: 362 KELWLFPVGIEALIGKVRFSRLGIKLAETHNKG--YRWQHEAVIAL 405 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3R45-A nrPDB 204 1e-53 6BUZ-A nrPDB 203 2e-53 3AN2-A nrPDB 199 2e-52 5ZBX-A nrPDB 177 1e-45 3WTP-E nrPDB 171 6e-44 3W98-A nrPDB 168 9e-43 4Z5T-A nrPDB 163 2e-41 4KUD-A nrPDB 154 9e-39 5AY8-A nrPDB 152 4e-38 6FTX-E nrPDB 145 6e-36 5MLU-A nrPDB 145 6e-36 3NQJ-A nrPDB 137 1e-33 2YFW-A nrPDB 136 4e-33 2L5A-A nrPDB 133 2e-32 5BO0-A nrPDB 131 8e-32 2YFV-A nrPDB 131 1e-31 2LY8-A nrPDB 101 8e-23 Sequences not found previously or not previously below threshold: 4EYU-A nrPDB 33 0.050 4A5P-A nrPDB 31 0.26 2K3Y-A nrPDB 29 0.68 1NPD-A nrPDB 29 0.86 1WPL-A nrPDB 29 1.0 5OQL-B nrPDB 28 1.2 6EPE-T nrPDB 28 1.6 1KU5-A nrPDB 28 1.7 3B0C-T nrPDB 27 2.1 5ZNP-A nrPDB 27 2.9 5EXR-B nrPDB 27 2.9 4BPX-B nrPDB 27 3.1 5FLX-A nrPDB 27 3.6 3BCH-A nrPDB 27 3.7 6D9J-BB nrPDB 27 3.8 4UJC-CA nrPDB 27 4.0 4BPU-B nrPDB 26 4.8 5NIL-D nrPDB 26 6.2 6FF4-Y nrPDB 26 6.6 1B67-A nrPDB 25 7.6 CONVERGED! >3R45-A nrPDB Length = 156 Score = 204 bits (518), Expect = 1e-53, Method: Composition-based stats. Identities = 140/140 (100%), Positives = 140/140 (100%) Query: 1 MGPRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHL 60 MGPRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHL Sbjct: 17 MGPRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHL 76 Query: 61 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVT 120 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVT Sbjct: 77 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVT 136 Query: 121 LFPKDVQLARRIRGLEEGLG 140 LFPKDVQLARRIRGLEEGLG Sbjct: 137 LFPKDVQLARRIRGLEEGLG 156 >6BUZ-A nrPDB Length = 160 Score = 203 bits (517), Expect = 2e-53, Method: Composition-based stats. Identities = 140/140 (100%), Positives = 140/140 (100%) Query: 1 MGPRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHL 60 MGPRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHL Sbjct: 21 MGPRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHL 80 Query: 61 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVT 120 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVT Sbjct: 81 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVT 140 Query: 121 LFPKDVQLARRIRGLEEGLG 140 LFPKDVQLARRIRGLEEGLG Sbjct: 141 LFPKDVQLARRIRGLEEGLG 160 >3AN2-A nrPDB Length = 143 Score = 199 bits (507), Expect = 2e-52, Method: Composition-based stats. Identities = 140/140 (100%), Positives = 140/140 (100%) Query: 1 MGPRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHL 60 MGPRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHL Sbjct: 4 MGPRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHL 63 Query: 61 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVT 120 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVT Sbjct: 64 LIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVT 123 Query: 121 LFPKDVQLARRIRGLEEGLG 140 LFPKDVQLARRIRGLEEGLG Sbjct: 124 LFPKDVQLARRIRGLEEGLG 143 >5ZBX-A nrPDB Length = 141 Score = 177 bits (449), Expect = 1e-45, Method: Composition-based stats. Identities = 87/132 (65%), Positives = 97/132 (73%), Gaps = 7/132 (5%) Query: 5 RRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGW--LKEIRKLQKSTHLLI 62 R+S +APR++ T + P+ G H R R G L+EIR+ QKST LLI Sbjct: 12 RKSTGGKAPRKQ----LATKAARKSAPATGGVKKPH-RYRPGTVALREIRRYQKSTELLI 66 Query: 63 RKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLF 122 RKLPF RL REIC FTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHA RVT+ Sbjct: 67 RKLPFQRLVREICQDFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAKRVTIM 126 Query: 123 PKDVQLARRIRG 134 PKD+QLARRIRG Sbjct: 127 PKDIQLARRIRG 138 >3WTP-E nrPDB Length = 140 Score = 171 bits (434), Expect = 6e-44, Method: Composition-based stats. Identities = 68/132 (51%), Positives = 83/132 (62%), Gaps = 9/132 (6%) Query: 5 RRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGW--LKEIRKLQKSTHLLI 62 R+S +APR++ T + PS G H R R G L+EIR+ QKST LLI Sbjct: 13 RKSTGGKAPRKQ----LATKAARKSAPSTGGVKKPH-RYRPGTVALREIRRYQKSTELLI 67 Query: 63 RKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLF 122 RKLPF RL REI F D +Q+ A+ ALQEA+EA+LV LFED L +HA RVT+ Sbjct: 68 RKLPFQRLVREIAQDFK--TDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIM 125 Query: 123 PKDVQLARRIRG 134 PKD+QLARRIRG Sbjct: 126 PKDIQLARRIRG 137 >3W98-A nrPDB Length = 112 Score = 168 bits (425), Expect = 9e-43, Method: Composition-based stats. Identities = 62/112 (55%), Positives = 73/112 (65%), Gaps = 5/112 (4%) Query: 25 GPSRRGPSLGASSHQHSRRRQGW--LKEIRKLQKSTHLLIRKLPFSRLAREICVKFTRGV 82 G P+ G H R R G L+EIR+ QKST LLIRKLPF RL REI F Sbjct: 1 GSHMSAPATGGVKKPH-RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK--T 57 Query: 83 DFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQLARRIRG 134 D +Q+ A++ALQEA EA+LV LFED L +HA RVT+ PKD+QLARRIRG Sbjct: 58 DLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 109 >4Z5T-A nrPDB Length = 138 Score = 163 bits (413), Expect = 2e-41, Method: Composition-based stats. Identities = 66/132 (50%), Positives = 81/132 (61%), Gaps = 10/132 (7%) Query: 5 RRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGW--LKEIRKLQKSTHLLI 62 R+S +APR++ T + PS H R R G L+EIR+ QKST LLI Sbjct: 12 RKSTGGKAPRKQ----LATKAARKSTPSTCGVK-PH-RYRPGTVALREIRRYQKSTELLI 65 Query: 63 RKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLF 122 RKLPF RL REI F D +Q+ A+ ALQEA+EA+LV L ED L +HA RVT+ Sbjct: 66 RKLPFQRLVREIAQDF--NTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIM 123 Query: 123 PKDVQLARRIRG 134 PKD+QLARRIRG Sbjct: 124 PKDIQLARRIRG 135 >4KUD-A nrPDB Length = 136 Score = 154 bits (390), Expect = 9e-39, Method: Composition-based stats. Identities = 62/132 (46%), Positives = 81/132 (61%), Gaps = 9/132 (6%) Query: 5 RRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGW--LKEIRKLQKSTHLLI 62 R+S +APR++ + + PS G H R + G L+EIR+ QKST LLI Sbjct: 9 RKSTGGKAPRKQ----LASKAARKSAPSTGGVKKPH-RYKPGTVALREIRRFQKSTELLI 63 Query: 63 RKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLF 122 RKLPF RL REI F D +Q+ A+ ALQE+ EA+LV LFED L +HA RVT+ Sbjct: 64 RKLPFQRLVREIAQDFK--TDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQ 121 Query: 123 PKDVQLARRIRG 134 KD++LARR+RG Sbjct: 122 KKDIKLARRLRG 133 >5AY8-A nrPDB Length = 139 Score = 152 bits (384), Expect = 4e-38, Method: Composition-based stats. Identities = 63/131 (48%), Positives = 82/131 (62%), Gaps = 9/131 (6%) Query: 5 RRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGW--LKEIRKLQKSTHLLI 62 R++ +APR+ P T +R P G H R + G L+EIRK QKST LL+ Sbjct: 12 RKATAWQAPRK----PLATKAAGKRAPPTGGIKKPH-RYKPGTLALREIRKYQKSTQLLL 66 Query: 63 RKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLF 122 RKLPF RL REI + D +Q+ A+ ALQEA+EA+LV LFED L +HA RVT+ Sbjct: 67 RKLPFQRLVREIAQAIS--PDLRFQSAAIGALQEASEAYLVQLFEDTNLCAIHARRVTIM 124 Query: 123 PKDVQLARRIR 133 P+D+QLARR+R Sbjct: 125 PRDMQLARRLR 135 >6FTX-E nrPDB Length = 110 Score = 145 bits (366), Expect = 6e-36, Method: Composition-based stats. Identities = 58/95 (61%), Positives = 69/95 (72%), Gaps = 4/95 (4%) Query: 42 RRRQGW--LKEIRKLQKSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAE 99 R R G L+EIR+ QKST LLIRKLPF RL REI F D +Q+ A++ALQEA+E Sbjct: 15 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSSAVMALQEASE 72 Query: 100 AFLVHLFEDAYLLTLHAGRVTLFPKDVQLARRIRG 134 A+LV LFED L +HA RVT+ PKD+QLARRIRG Sbjct: 73 AYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRG 107 >5MLU-A nrPDB Length = 97 Score = 145 bits (366), Expect = 6e-36, Method: Composition-based stats. Identities = 58/95 (61%), Positives = 69/95 (72%), Gaps = 4/95 (4%) Query: 42 RRRQGW--LKEIRKLQKSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAE 99 R R G L+EIR+ QKST LLIRKLPF RL REI F D +Q+ A++ALQEA+E Sbjct: 2 RYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSSAVMALQEASE 59 Query: 100 AFLVHLFEDAYLLTLHAGRVTLFPKDVQLARRIRG 134 A+LV LFED L +HA RVT+ PKD+QLARRIRG Sbjct: 60 AYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRG 94 >3NQJ-A nrPDB Length = 82 Score = 137 bits (346), Expect = 1e-33, Method: Composition-based stats. Identities = 81/81 (100%), Positives = 81/81 (100%) Query: 60 LLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRV 119 LLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRV Sbjct: 2 LLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRV 61 Query: 120 TLFPKDVQLARRIRGLEEGLG 140 TLFPKDVQLARRIRGLEEGLG Sbjct: 62 TLFPKDVQLARRIRGLEEGLG 82 >2YFW-A nrPDB Length = 92 Score = 136 bits (342), Expect = 4e-33, Method: Composition-based stats. Identities = 49/88 (55%), Positives = 65/88 (73%), Gaps = 1/88 (1%) Query: 48 LKEIRKLQKSTHLLIRKLPFSRLAREICVKFTRGVD-FNWQAQALLALQEAAEAFLVHLF 106 L EIRK Q+ST LLI ++PF+RL +E+ +FT + WQ+ A++ALQEA+EA+LV L Sbjct: 2 LAEIRKYQRSTDLLISRMPFARLVKEVTDQFTTESEPLRWQSMAIMALQEASEAYLVGLL 61 Query: 107 EDAYLLTLHAGRVTLFPKDVQLARRIRG 134 E LL LHA R+T+ KD+QLARRIRG Sbjct: 62 EHTNLLALHAKRITIMRKDMQLARRIRG 89 >2L5A-A nrPDB Length = 235 Score = 133 bits (335), Expect = 2e-32, Method: Composition-based stats. Identities = 43/77 (55%), Positives = 57/77 (74%), Gaps = 1/77 (1%) Query: 59 HLLIRKLPFSRLAREICVKFT-RGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAG 117 LLI K+PF+RL +E+ +FT + D WQ+ A++ALQEA+EA+LV L E LL LHA Sbjct: 9 KLLISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALHAK 68 Query: 118 RVTLFPKDVQLARRIRG 134 R+T+ KD+QLARRIRG Sbjct: 69 RITIMKKDMQLARRIRG 85 >5BO0-A nrPDB Length = 80 Score = 131 bits (330), Expect = 8e-32, Method: Composition-based stats. Identities = 50/79 (63%), Positives = 59/79 (74%), Gaps = 2/79 (2%) Query: 56 KSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLH 115 KST LLIRKLPF RL REI F D +Q+ A++ALQEA+EA+LV LFED L +H Sbjct: 1 KSTELLIRKLPFQRLVREIAQDFK--TDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIH 58 Query: 116 AGRVTLFPKDVQLARRIRG 134 A RVT+ PKD+QLARRIRG Sbjct: 59 AKRVTIMPKDIQLARRIRG 77 >2YFV-A nrPDB Length = 100 Score = 131 bits (328), Expect = 1e-31, Method: Composition-based stats. Identities = 49/100 (49%), Positives = 68/100 (68%), Gaps = 3/100 (3%) Query: 37 SHQHSRRRQG--WLKEIRKLQKSTHLLIRKLPFSRLAREICVKFTRGVD-FNWQAQALLA 93 + +R + L EIRK Q+ST LLI ++PF+RL +E+ +FT + WQ+ A++A Sbjct: 1 KARGTRYKPTDLALAEIRKYQRSTDLLISRMPFARLVKEVTDQFTTESEPLRWQSMAIMA 60 Query: 94 LQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQLARRIR 133 LQEA+EA+LV L E LL LHA R+T+ KD+QLARRIR Sbjct: 61 LQEASEAYLVGLLEHTNLLALHAKRITIMRKDMQLARRIR 100 >2LY8-A nrPDB Length = 121 Score = 101 bits (252), Expect = 8e-23, Method: Composition-based stats. Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 9/76 (11%) Query: 61 LIRKLPFSRLAREICVKFT-RGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRV 119 LI K+PF+RL +E+ +FT + D WQ+ A++ALQEA+EA+LV L E LL LH Sbjct: 1 LISKIPFARLVKEVTDEFTTKDQDLRWQSMAIMALQEASEAYLVGLLEHTNLLALH---- 56 Query: 120 TLFPKDVQLARRIRGL 135 L P+ ++RI GL Sbjct: 57 -LVPRG---SKRISGL 68 >4EYU-A nrPDB Length = 486 Score = 32.8 bits (73), Expect = 0.050, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 4/54 (7%) Query: 21 TPTPGPSRRGPSL-GASSHQHSRRRQGW---LKEIRKLQKSTHLLIRKLPFSRL 70 PT + P+ G SS H + G L + ++ + L++ F R+ Sbjct: 146 GPTKAARKSAPATGGGSSGSHHIIKFGTNIDLSDAKRWKPQLQELLKLPAFMRV 199 >4A5P-A nrPDB Length = 383 Score = 30.5 bits (67), Expect = 0.26, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 29/60 (48%), Gaps = 8/60 (13%) Query: 48 LKEIRKLQKSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFE 107 L+E+R +K+ LL+ + R + + +++ +++ E EA+ +++ + Sbjct: 330 LRELRNAKKNFVLLVS-VDIRRFVKRLIDN-------RFKSILVISYAEIDEAYTINVLK 381 >2K3Y-A nrPDB Length = 136 Score = 29.0 bits (63), Expect = 0.68, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 13/33 (39%), Gaps = 4/33 (12%) Query: 12 APRRRSPSPTPTPGPSRRGPSLGASSHQHSRRR 44 A ++R + + G P+ G H R R Sbjct: 108 AMKKRLANEAGSTG---SAPATGGVKKPH-RYR 136 >1NPD-A nrPDB Length = 288 Score = 28.6 bits (62), Expect = 0.86, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 17/50 (34%) Query: 48 LKEIRKLQKSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEA 97 LKEI+ + + L F++ E D Q AL A Sbjct: 148 LKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASA 197 >1WPL-A nrPDB Length = 230 Score = 28.6 bits (62), Expect = 1.0, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 6/91 (6%) Query: 13 PRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQKSTHLLIRKL--PFSRL 70 P R P P + + P + + G + ++ L + L +S + Sbjct: 3 PERELPRPGASRPAEKSRPPEAKGAQPADAWKAGRPRS----EEDNELNLPNLAAAYSSI 58 Query: 71 AREICVKFTRGVDFNWQAQALLALQEAAEAF 101 R + R +A A+Q + + Sbjct: 59 LRSLGEDPQRQGLLKTPWRAATAMQFFTKGY 89 >5OQL-B nrPDB Length = 907 Score = 28.2 bits (61), Expect = 1.2, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 10/62 (16%) Query: 26 PSRRGPSLGASSHQHSRRRQGWLKEIRK---LQKSTHLLIRK-------LPFSRLAREIC 75 P+R L +H R R+G L+E+RK + L I+K F R+ EI Sbjct: 827 PNRERAELAKLKAEHKRERKGALRELRKDAQFIRREQLRIKKEKDEAYEKKFKRIIAEIQ 886 Query: 76 VK 77 + Sbjct: 887 NE 888 >6EPE-T nrPDB Length = 353 Score = 27.8 bits (60), Expect = 1.6, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 11/51 (21%) Query: 3 PRRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRK 53 PRR SR+ + P P+LG++S H RR + RK Sbjct: 15 PRRSSRRGQ--------KLAVVAP---PPALGSTSRPHFRRESIARRRCRK 54 >1KU5-A nrPDB Length = 70 Score = 27.8 bits (60), Expect = 1.7, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 7/64 (10%) Query: 66 PFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKD 125 P RL R+ + QA L E E + + + + A HAGR T+ +D Sbjct: 11 PVDRLIRKAGAE-------RVSEQAAKVLAEYLEEYAIEIAKKAVEFARHAGRKTVKVED 63 Query: 126 VQLA 129 ++LA Sbjct: 64 IKLA 67 >3B0C-T nrPDB Length = 111 Score = 27.4 bits (59), Expect = 2.1, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 3/68 (4%) Query: 68 SRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKDVQ 127 S L ++I + + A +++ +E + + D + HAGR T+ DV+ Sbjct: 10 SSLIKQIFSHYVKTPVTR---DAYKIVEKCSERYFKQISSDLEAYSQHAGRKTVEMADVE 66 Query: 128 LARRIRGL 135 L R +GL Sbjct: 67 LLMRRQGL 74 >5ZNP-A nrPDB Length = 216 Score = 27.0 bits (58), Expect = 2.9, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 18/47 (38%) Query: 9 KPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWLKEIRKLQ 55 K +APRR S T P P + ++ +I +++ Sbjct: 4 KAKAPRRTLDSYTVKPINKTVKPGDCVLMRPSDPSKPSYVAKIERIE 50 >5EXR-B nrPDB Length = 509 Score = 27.0 bits (58), Expect = 2.9, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 18/41 (43%) Query: 50 EIRKLQKSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQA 90 E+R+ + + + FS L ++ F + ++A + Sbjct: 115 ELRRWFIQQEMDLLRFRFSILPKDKIQDFLKDSQLQFEAIS 155 >4BPX-B nrPDB Length = 269 Score = 27.0 bits (58), Expect = 3.1, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 18/41 (43%) Query: 50 EIRKLQKSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQA 90 E+R+ + + + FS L ++ F + ++A + Sbjct: 131 ELRRWFIQQEMDLLRFRFSILPKDKIQDFLKDSQLQFEAIS 171 >5FLX-A nrPDB Length = 295 Score = 26.6 bits (57), Expect = 3.6, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 15/43 (34%) Query: 6 RSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWL 48 R+ A + + + TP R P + Q + R L Sbjct: 80 RNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLL 122 >3BCH-A nrPDB Length = 253 Score = 26.6 bits (57), Expect = 3.7, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 15/43 (34%) Query: 6 RSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWL 48 R+ A + + + TP R P + Q + R L Sbjct: 113 RNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLL 155 >6D9J-BB nrPDB Length = 217 Score = 26.6 bits (57), Expect = 3.8, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 15/43 (34%) Query: 6 RSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWL 48 R+ A + + + TP R P + Q + R L Sbjct: 79 RNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQTAFREPRLL 121 >4UJC-CA nrPDB Length = 263 Score = 26.6 bits (57), Expect = 4.0, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 15/43 (34%) Query: 6 RSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSRRRQGWL 48 R+ A + + + TP R P + Q + R L Sbjct: 80 RNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLL 122 >4BPU-B nrPDB Length = 253 Score = 26.3 bits (56), Expect = 4.8, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 18/41 (43%) Query: 50 EIRKLQKSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQA 90 E+R+ + + + FS L ++ F + ++A + Sbjct: 115 ELRRWFIQQEMDLLRFRFSILPKDKIQDFLKDSQLQFEAIS 155 >5NIL-D nrPDB Length = 371 Score = 25.9 bits (55), Expect = 6.2, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 49 KEIRKLQKSTHLLIRKLPFSRLAREICVKFTRGVDFNWQAQALLALQEA 97 +I++ Q S L ++R+ + + T+ Q Q ++A Q+A Sbjct: 165 AQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTL--QGQTVIAAQQA 211 >6FF4-Y nrPDB Length = 904 Score = 25.9 bits (55), Expect = 6.6, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Query: 5 RRSRKPEAPRRRSPSPTPTPGPSRRGPS---LGASSHQHSRRRQG-WLKEIRKLQKSTH 59 R +R P+ +R SPSP P + P GASS R+ + IR++ ++ Sbjct: 671 REARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPE 729 >1B67-A nrPDB Length = 68 Score = 25.5 bits (54), Expect = 7.6, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 7/67 (10%) Query: 66 PFSRLAREICVKFTRGVDFNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAGRVTLFPKD 125 P R+ + + A +AL + E + +A L HAGR T+ +D Sbjct: 7 PIGRIIKNAGAE-------RVSDDARIALAKVLEEMGEEIASEAVKLAKHAGRKTIKAED 59 Query: 126 VQLARRI 132 ++LAR++ Sbjct: 60 IELARKM 66 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.303 0.126 0.329 Lambda K H 0.267 0.0387 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,902,097 Number of Sequences: 36641 Number of extensions: 164296 Number of successful extensions: 803 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 66 Number of HSP's successfully gapped in prelim test: 24 Number of HSP's that attempted gapping in prelim test: 608 Number of HSP's gapped (non-prelim): 158 length of query: 140 length of database: 10,336,785 effective HSP length: 87 effective length of query: 53 effective length of database: 7,149,018 effective search space: 378897954 effective search space used: 378897954 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 54 (25.5 bits)