BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P49354 (379 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2H6F-A nrPDB 783 0.0 1O1S-A nrPDB 634 0.0 2BED-A nrPDB 600 e-172 4MBG-A nrPDB 204 4e-53 3Q78-A nrPDB 202 3e-52 4YDO-A nrPDB 148 4e-36 1DCE-A nrPDB 74 8e-14 3C72-A nrPDB 74 1e-13 5G04-F nrPDB 33 0.16 5FET-A nrPDB 30 2.5 1GPI-A nrPDB 29 4.2 6NU3-c nrPDB 28 6.7 >2H6F-A nrPDB Length = 382 Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/379 (100%), Positives = 379/379 (100%) Query: 1 MAATEGVGEAAQGGEPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVASPMDDGFVSLDS 60 MAATEGVGEAAQGGEPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVASPMDDGFVSLDS Sbjct: 1 MAATEGVGEAAQGGEPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVASPMDDGFVSLDS 60 Query: 61 PSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLT 120 PSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLT Sbjct: 61 PSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLT 120 Query: 121 RDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLR 180 RDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLR Sbjct: 121 RDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLR 180 Query: 181 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQR 240 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQR Sbjct: 181 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQR 240 Query: 241 YFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLL 300 YFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLL Sbjct: 241 YFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLL 300 Query: 301 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG 360 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG Sbjct: 301 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG 360 Query: 361 RSLQSKHSTENDSPTNVQQ 379 RSLQSKHSTENDSPTNVQQ Sbjct: 361 RSLQSKHSTENDSPTNVQQ 379 >1O1S-A nrPDB Length = 380 Score = 634 bits (1634), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/377 (93%), Positives = 365/377 (96%) Query: 1 MAATEGVGEAAQGGEPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVASPMDDGFVSLDS 60 MAATEGVGE+A GGEPGQP QPPP P PPP QQ +EEMAAEAGEA ASPMDDGF+SLDS Sbjct: 4 MAATEGVGESAPGGEPGQPEQPPPPPPPPPAQQPQEEEMAAEAGEAAASPMDDGFLSLDS 63 Query: 61 PSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLT 120 P+YVLYRDRAEWADIDPVPQNDGP+PVVQIIYS+KFRDVYDYFRAVLQRDERSERAFKLT Sbjct: 64 PTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLT 123 Query: 121 RDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLR 180 RDAIELNAANYTVWHFRRVLL+SLQKDL EEMNYITAIIEEQPKNYQVWHHRRVLVEWL+ Sbjct: 124 RDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYITAIIEEQPKNYQVWHHRRVLVEWLK 183 Query: 181 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQR 240 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEF+LWDNELQYVDQLLKEDVRNNSVWNQR Sbjct: 184 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRNNSVWNQR 243 Query: 241 YFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLL 300 +FVISNTTGY+DRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLS+YPNLLNQLL Sbjct: 244 HFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYPNLLNQLL 303 Query: 301 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG 360 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG Sbjct: 304 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG 363 Query: 361 RSLQSKHSTENDSPTNV 377 RSLQSKHS E+D P +V Sbjct: 364 RSLQSKHSRESDIPASV 380 >2BED-A nrPDB Length = 313 Score = 600 bits (1546), Expect = e-172, Method: Compositional matrix adjust. Identities = 302/313 (96%), Positives = 312/313 (99%) Query: 54 GFVSLDSPSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERS 113 GF+SLDSP+YVLYRDRAEWADIDPVPQNDGP+PVVQIIYS+KFRDVYDYFRAVLQRDERS Sbjct: 1 GFLSLDSPTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERS 60 Query: 114 ERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRR 173 ERAFKLTRDAIELNAANYTVWHFRRVLL+SLQKDL EEMNYITAIIEEQPKNYQVWHHRR Sbjct: 61 ERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYITAIIEEQPKNYQVWHHRR 120 Query: 174 VLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRN 233 VLVEWL+DPSQELEFIADILNQDAKNYHAWQHRQWVIQEF+LWDNELQYVDQLLKEDVRN Sbjct: 121 VLVEWLKDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRN 180 Query: 234 NSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYP 293 NSVWNQR+FVISNTTGY+DRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLS+YP Sbjct: 181 NSVWNQRHFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYP 240 Query: 294 NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRK 353 NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRK Sbjct: 241 NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRK 300 Query: 354 EYWRYIGRSLQSK 366 EYWRYIGRSLQSK Sbjct: 301 EYWRYIGRSLQSK 313 >4MBG-A nrPDB Length = 367 Score = 204 bits (520), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 124/351 (35%), Positives = 194/351 (55%), Gaps = 53/351 (15%) Query: 66 YRDRAEWADIDPVPQNDGPN----PVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTR 121 Y EWA I P+ NDG + P+ I YS ++ + Y RAV+ +E SERA +LT Sbjct: 19 YSSDPEWASIKPIELNDGSDFGAMPLATISYSPEYLEATSYLRAVMAANEMSERALRLTG 78 Query: 122 DAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVE---- 177 D I +N A+YTVW +R +L +L KDL+EE+ ++ + + KNYQ+WHHR+VL+ Sbjct: 79 DIISMNPAHYTVWIYRAKILFALGKDLNEEIEWLNKVALKHLKNYQIWHHRQVLMSSRAH 138 Query: 178 WLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDN--ELQYVDQLLKEDVRNNS 235 + P +E +F+ ++ QDAK+YH W +R W+++ FKLWD+ E+Q V+ LLK DVRNNS Sbjct: 139 FPTLPPREQDFLMEMFAQDAKSYHVWTYRHWLVRHFKLWDHPREIQDVEALLKADVRNNS 198 Query: 236 VWNQRYFV-------------ISNTTGYN---------DRAVLEREVQYTLEMIKLVPHN 273 WN RY + + NTTG + D +++ E+QY+ I P N Sbjct: 199 AWNHRYMLRFGPRDENEFDAGLHNTTGPSSEKGRLPVVDEDLVDSELQYSQSRILEAPEN 258 Query: 274 ESAWNYLKGILQDRG--LSKYPNLL----------NQLLDLQPSHSSPYLIAFLVDIYED 321 S W+Y +G+LQ G LS++ + Q++D+ + S + I +L D+Y Sbjct: 259 RSPWSYARGVLQAAGRPLSEWKDFARSFVVEKQENGQVVDV--AVKSSHAIEWLADVYA- 315 Query: 322 MLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIGRSLQSK--HSTE 370 + D E +A+++ +L ++ D IR+ YW Y R + + H+TE Sbjct: 316 ----EEDGSEGSAAEAVKMLTLLKEKYDPIRRNYWEYRIRQITASAAHATE 362 >3Q78-A nrPDB Length = 349 Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 117/330 (35%), Positives = 183/330 (55%), Gaps = 29/330 (8%) Query: 60 SPSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKL 119 + +Y+ R WAD+ P+ Q+DGPNPVV I+YS++++D DYFRA+ ++E+SERA +L Sbjct: 17 TSTYIPMSQRRSWADVKPIMQDDGPNPVVPIMYSEEYKDAMDYFRAIAAKEEKSERALEL 76 Query: 120 TRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWL 179 T + +N A+YTVW +R LL SL K L +E+ + + K+YQVWHHR +L++ + Sbjct: 77 TEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRI 136 Query: 180 --RDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKL--------WDNELQYVDQLLKE 229 +DP E+E+I L D KNYH W + W+ F W +EL + +++L+ Sbjct: 137 SPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRV 196 Query: 230 DVRNNSVWNQRYFV-ISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRG 288 D RNNS W R+++ +S L+ E+ Y L+ I L+PHN SAWNYL+G L+ Sbjct: 197 DGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWNYLRGFLKHFS 256 Query: 289 LSKYPNLLNQLLDLQPSHSSP---YLIAFLVDIYED------------MLENQCDN--KE 331 L P +L +L S +P + AF + D LE D+ ++ Sbjct: 257 LPLVP-ILPAILPYTASKLNPDIETVEAFGFPMPSDPLPEDTPLPVPLALEYLADSFIEQ 315 Query: 332 DILNKALELCEILAKEKDTIRKEYWRYIGR 361 + ++ A ++ E L+ E D +R YW + R Sbjct: 316 NRVDDAAKVFEKLSSEYDQMRAGYWEFRRR 345 >4YDO-A nrPDB Length = 329 Score = 148 bits (373), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 86/310 (27%), Positives = 168/310 (54%), Gaps = 22/310 (7%) Query: 69 RAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNA 128 + +++DI PV N + QI+Y + ++ + ++++ +E SERA +T I A Sbjct: 29 KYDYSDITPVDINTEEPQICQILYDEDYKQIMGILLSLMKAEEYSERALHITELGINELA 88 Query: 129 ANYTVWHFRRVLLKSL-QKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLR------- 180 ++YT+W +R +LK+L ++L++E+++ I + KNYQ+W++R++++ + Sbjct: 89 SHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDF 148 Query: 181 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDN--ELQYVDQLLKEDVRNNSVWN 238 DP +E + +L+ D KN+H W +R+W++ F L ++ EL +VD+++ D++NNS W+ Sbjct: 149 DPYREFPILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWS 208 Query: 239 QRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQ--DRGLSKYPNLL 296 R+F++ + ++ E+ Y + I P N S WNYL GI + DR +++ Sbjct: 209 HRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSITQLEEFS 268 Query: 297 NQLLDLQPSH-SSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEY 355 Q +DL+ +S + + L IY ++ N++ + ++L + D IR + Sbjct: 269 LQFVDLEKDQVTSSFALETLAKIY---------TQQKKYNESRTVYDLLKSKYDPIRSNF 319 Query: 356 WRYIGRSLQS 365 W Y L S Sbjct: 320 WDYQISKLTS 329 >1DCE-A nrPDB Length = 567 Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 20/197 (10%) Query: 108 QRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKD---------LHEEMNYITAI 158 Q E E +LT + N T+W+ RR +L+ L+ + + E+ ++ + Sbjct: 40 QAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESC 99 Query: 159 IEEQPKNYQVWHHRRVLVEWLRDP--SQELEFIADILNQDAKNYHAWQHRQW-VIQEFKL 215 + PK+Y WHHR L+ L +P ++ELE A L D +N+H W +R++ Q Sbjct: 100 LRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVA 159 Query: 216 WDNELQYVDQLLKEDVRNNSVWNQRYFVI--------SNTTGYNDRAVLEREVQYTLEMI 267 EL + D L+ + N S W+ R ++ S G VL +E++ Sbjct: 160 PAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAF 219 Query: 268 KLVPHNESAWNYLKGIL 284 P+++SAW Y + +L Sbjct: 220 FTDPNDQSAWFYHRWLL 236 >3C72-A nrPDB Length = 334 Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 20/197 (10%) Query: 108 QRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKD---------LHEEMNYITAI 158 Q E E +LT + N T+W+ RR +L+ L+ + + E+ ++ + Sbjct: 44 QAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESC 103 Query: 159 IEEQPKNYQVWHHRRVLVEWLRDP--SQELEFIADILNQDAKNYHAWQHRQW-VIQEFKL 215 + PK+Y WHHR L+ L +P ++ELE A L D +N+H W +R++ Q Sbjct: 104 LRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVA 163 Query: 216 WDNELQYVDQLLKEDVRNNSVWNQRYFVI--------SNTTGYNDRAVLEREVQYTLEMI 267 EL + D L+ + N S W+ R ++ S G VL +E++ Sbjct: 164 PAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAF 223 Query: 268 KLVPHNESAWNYLKGIL 284 P+++SAW Y + +L Sbjct: 224 FTDPNDQSAWFYHRWLL 240 >5G04-F nrPDB Length = 824 Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust. Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 5/135 (3%) Query: 111 ERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWH 170 E ++A R+AI +N +Y W+ ++ +K EM++ A ++ P++ + Sbjct: 615 EELDKALACFRNAIRVNPRHYNAWYGLGMIYYKQEKFSLAEMHFQKA-LDINPQSSVLLC 673 Query: 171 HRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKED 230 H V+ L+ + L+ + + D KN HR V+ + + + LQ +++ LK+ Sbjct: 674 HIGVVQHALKKSEKALDTLNKAIVIDPKNPLCKFHRASVLFANEKYKSALQELEE-LKQI 732 Query: 231 VRNNSVWNQRYFVIS 245 V S+ YF+I Sbjct: 733 VPKESLV---YFLIG 744 >5FET-A nrPDB Length = 847 Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust. Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 8/64 (12%) Query: 119 LTRDAIELNAANYTVWHFRRVLLKSLQKD------LHEEMNYI--TAIIEEQPKNYQVWH 170 + R + + N V FR ++ ++LQ+ E++N + TAI+ + P NY + H Sbjct: 259 ICRKLLNIVLGNLQVVLFRNIMTEALQQSEIFRQFSAEQLNDLADTAIVRDYPANYHILH 318 Query: 171 HRRV 174 +V Sbjct: 319 KDKV 322 >1GPI-A nrPDB Length = 431 Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust. Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 238 NQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPN 294 R +++++ T Y +L +E + ++M L P + YL + D G+SKYP Sbjct: 102 GSRVYLMADDTHYQLLKLLNQEFTFDVDMSNL-PCGLNGALYLSAMDADGGMSKYPG 157 >6NU3-c nrPDB Length = 332 Score = 28.1 bits (61), Expect = 6.7, Method: Compositional matrix adjust. Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 8/102 (7%) Query: 262 YTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLN-----QLLDLQPSHSSPYLIAFLV 316 ++L+++K N + Q G+ K LLN +L + S S L FL Sbjct: 83 FSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLKSNQELSEQGTSFSQTCLTQFLE 142 Query: 317 DIYEDMLENQCDNKEDILNKALELCEI---LAKEKDTIRKEY 355 D Y DM N D L +C + LA E+ T+ +E+ Sbjct: 143 DEYPDMPTEGIKNLVDFLTGEEVVCHVARNLAVEQLTLSEEF 184 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2H6F-A nrPDB 628 e-180 1O1S-A nrPDB 526 e-150 2BED-A nrPDB 490 e-139 3Q78-A nrPDB 393 e-110 4YDO-A nrPDB 382 e-106 4MBG-A nrPDB 372 e-103 1DCE-A nrPDB 231 5e-61 3C72-A nrPDB 225 2e-59 Sequences not found previously or not previously below threshold: 5G04-F nrPDB 41 0.001 4RI1-A nrPDB 34 0.084 3J9M-A1 nrPDB 34 0.098 5WC4-A nrPDB 33 0.21 5J8N-A nrPDB 33 0.22 1W3B-A nrPDB 33 0.27 5ZLM-A nrPDB 32 0.30 2WW2-A nrPDB 32 0.41 4WUM-A nrPDB 32 0.53 6GAZ-Ao nrPDB 32 0.54 6GAW-Ao nrPDB 32 0.56 1Y6Z-A nrPDB 32 0.62 4I80-A nrPDB 31 0.66 2GWR-A nrPDB 31 0.67 4YJY-A nrPDB 31 0.68 1XET-A nrPDB 31 0.74 6DXA-A nrPDB 31 0.87 6MZC-I nrPDB 31 0.92 4UUD-B nrPDB 30 1.3 1UOU-A nrPDB 30 1.8 5NNP-A nrPDB 30 2.1 4AXG-A nrPDB 30 2.3 6AHD-v nrPDB 29 2.4 4QDM-A nrPDB 29 4.5 6AHR-F nrPDB 28 6.2 3AJA-A nrPDB 28 9.2 >2H6F-A nrPDB Length = 382 Score = 628 bits (1620), Expect = e-180, Method: Composition-based stats. Identities = 379/379 (100%), Positives = 379/379 (100%) Query: 1 MAATEGVGEAAQGGEPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVASPMDDGFVSLDS 60 MAATEGVGEAAQGGEPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVASPMDDGFVSLDS Sbjct: 1 MAATEGVGEAAQGGEPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVASPMDDGFVSLDS 60 Query: 61 PSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLT 120 PSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLT Sbjct: 61 PSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLT 120 Query: 121 RDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLR 180 RDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLR Sbjct: 121 RDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLR 180 Query: 181 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQR 240 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQR Sbjct: 181 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQR 240 Query: 241 YFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLL 300 YFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLL Sbjct: 241 YFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLL 300 Query: 301 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG 360 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG Sbjct: 301 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG 360 Query: 361 RSLQSKHSTENDSPTNVQQ 379 RSLQSKHSTENDSPTNVQQ Sbjct: 361 RSLQSKHSTENDSPTNVQQ 379 >1O1S-A nrPDB Length = 380 Score = 526 bits (1354), Expect = e-150, Method: Composition-based stats. Identities = 351/377 (93%), Positives = 365/377 (96%) Query: 1 MAATEGVGEAAQGGEPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVASPMDDGFVSLDS 60 MAATEGVGE+A GGEPGQP QPPP P PPP QQ +EEMAAEAGEA ASPMDDGF+SLDS Sbjct: 4 MAATEGVGESAPGGEPGQPEQPPPPPPPPPAQQPQEEEMAAEAGEAAASPMDDGFLSLDS 63 Query: 61 PSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLT 120 P+YVLYRDRAEWADIDPVPQNDGP+PVVQIIYS+KFRDVYDYFRAVLQRDERSERAFKLT Sbjct: 64 PTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLT 123 Query: 121 RDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLR 180 RDAIELNAANYTVWHFRRVLL+SLQKDL EEMNYITAIIEEQPKNYQVWHHRRVLVEWL+ Sbjct: 124 RDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYITAIIEEQPKNYQVWHHRRVLVEWLK 183 Query: 181 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQR 240 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEF+LWDNELQYVDQLLKEDVRNNSVWNQR Sbjct: 184 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRNNSVWNQR 243 Query: 241 YFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLL 300 +FVISNTTGY+DRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLS+YPNLLNQLL Sbjct: 244 HFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYPNLLNQLL 303 Query: 301 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG 360 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG Sbjct: 304 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG 363 Query: 361 RSLQSKHSTENDSPTNV 377 RSLQSKHS E+D P +V Sbjct: 364 RSLQSKHSRESDIPASV 380 >2BED-A nrPDB Length = 313 Score = 490 bits (1260), Expect = e-139, Method: Composition-based stats. Identities = 302/313 (96%), Positives = 312/313 (99%) Query: 54 GFVSLDSPSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERS 113 GF+SLDSP+YVLYRDRAEWADIDPVPQNDGP+PVVQIIYS+KFRDVYDYFRAVLQRDERS Sbjct: 1 GFLSLDSPTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERS 60 Query: 114 ERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRR 173 ERAFKLTRDAIELNAANYTVWHFRRVLL+SLQKDL EEMNYITAIIEEQPKNYQVWHHRR Sbjct: 61 ERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYITAIIEEQPKNYQVWHHRR 120 Query: 174 VLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRN 233 VLVEWL+DPSQELEFIADILNQDAKNYHAWQHRQWVIQEF+LWDNELQYVDQLLKEDVRN Sbjct: 121 VLVEWLKDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRN 180 Query: 234 NSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYP 293 NSVWNQR+FVISNTTGY+DRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLS+YP Sbjct: 181 NSVWNQRHFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYP 240 Query: 294 NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRK 353 NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRK Sbjct: 241 NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRK 300 Query: 354 EYWRYIGRSLQSK 366 EYWRYIGRSLQSK Sbjct: 301 EYWRYIGRSLQSK 313 >3Q78-A nrPDB Length = 349 Score = 393 bits (1010), Expect = e-110, Method: Composition-based stats. Identities = 117/331 (35%), Positives = 183/331 (55%), Gaps = 29/331 (8%) Query: 60 SPSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKL 119 + +Y+ R WAD+ P+ Q+DGPNPVV I+YS++++D DYFRA+ ++E+SERA +L Sbjct: 17 TSTYIPMSQRRSWADVKPIMQDDGPNPVVPIMYSEEYKDAMDYFRAIAAKEEKSERALEL 76 Query: 120 TRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWL 179 T + +N A+YTVW +R LL SL K L +E+ + + K+YQVWHHR +L++ + Sbjct: 77 TEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRI 136 Query: 180 --RDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKL--------WDNELQYVDQLLKE 229 +DP E+E+I L D KNYH W + W+ F W +EL + +++L+ Sbjct: 137 SPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRV 196 Query: 230 DVRNNSVWNQRYFV-ISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRG 288 D RNNS W R+++ +S L+ E+ Y L+ I L+PHN SAWNYL+G L+ Sbjct: 197 DGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWNYLRGFLKHFS 256 Query: 289 LSKYPNLLNQLLDLQPSHSSP---YLIAFLVDIYED------------MLENQCDN--KE 331 L P +L +L S +P + AF + D LE D+ ++ Sbjct: 257 LPLVP-ILPAILPYTASKLNPDIETVEAFGFPMPSDPLPEDTPLPVPLALEYLADSFIEQ 315 Query: 332 DILNKALELCEILAKEKDTIRKEYWRYIGRS 362 + ++ A ++ E L+ E D +R YW + R Sbjct: 316 NRVDDAAKVFEKLSSEYDQMRAGYWEFRRRE 346 >4YDO-A nrPDB Length = 329 Score = 382 bits (982), Expect = e-106, Method: Composition-based stats. Identities = 86/311 (27%), Positives = 168/311 (54%), Gaps = 22/311 (7%) Query: 68 DRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELN 127 + +++DI PV N + QI+Y + ++ + ++++ +E SERA +T I Sbjct: 28 SKYDYSDITPVDINTEEPQICQILYDEDYKQIMGILLSLMKAEEYSERALHITELGINEL 87 Query: 128 AANYTVWHFRRVLLKSL-QKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLR------ 180 A++YT+W +R +LK+L ++L++E+++ I + KNYQ+W++R++++ + Sbjct: 88 ASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNND 147 Query: 181 -DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDN--ELQYVDQLLKEDVRNNSVW 237 DP +E + +L+ D KN+H W +R+W++ F L ++ EL +VD+++ D++NNS W Sbjct: 148 FDPYREFPILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAW 207 Query: 238 NQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQ--DRGLSKYPNL 295 + R+F++ + ++ E+ Y + I P N S WNYL GI + DR +++ Sbjct: 208 SHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSITQLEEF 267 Query: 296 LNQLLDLQPSH-SSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKE 354 Q +DL+ +S + + L IY ++ N++ + ++L + D IR Sbjct: 268 SLQFVDLEKDQVTSSFALETLAKIY---------TQQKKYNESRTVYDLLKSKYDPIRSN 318 Query: 355 YWRYIGRSLQS 365 +W Y L S Sbjct: 319 FWDYQISKLTS 329 >4MBG-A nrPDB Length = 367 Score = 372 bits (955), Expect = e-103, Method: Composition-based stats. Identities = 121/355 (34%), Positives = 193/355 (54%), Gaps = 51/355 (14%) Query: 66 YRDRAEWADIDPVPQNDGPN----PVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTR 121 Y EWA I P+ NDG + P+ I YS ++ + Y RAV+ +E SERA +LT Sbjct: 19 YSSDPEWASIKPIELNDGSDFGAMPLATISYSPEYLEATSYLRAVMAANEMSERALRLTG 78 Query: 122 DAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVE---- 177 D I +N A+YTVW +R +L +L KDL+EE+ ++ + + KNYQ+WHHR+VL+ Sbjct: 79 DIISMNPAHYTVWIYRAKILFALGKDLNEEIEWLNKVALKHLKNYQIWHHRQVLMSSRAH 138 Query: 178 WLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDN--ELQYVDQLLKEDVRNNS 235 + P +E +F+ ++ QDAK+YH W +R W+++ FKLWD+ E+Q V+ LLK DVRNNS Sbjct: 139 FPTLPPREQDFLMEMFAQDAKSYHVWTYRHWLVRHFKLWDHPREIQDVEALLKADVRNNS 198 Query: 236 VWNQRYFV-------------ISNTTGYN---------DRAVLEREVQYTLEMIKLVPHN 273 WN RY + + NTTG + D +++ E+QY+ I P N Sbjct: 199 AWNHRYMLRFGPRDENEFDAGLHNTTGPSSEKGRLPVVDEDLVDSELQYSQSRILEAPEN 258 Query: 274 ESAWNYLKGILQDRG--LSKYPNLL----------NQLLDLQPSHSSPYLIAFLVDIYED 321 S W+Y +G+LQ G LS++ + Q++D+ + S + I +L D+Y Sbjct: 259 RSPWSYARGVLQAAGRPLSEWKDFARSFVVEKQENGQVVDV--AVKSSHAIEWLADVYA- 315 Query: 322 MLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIGRSLQSKHSTENDSPTN 376 + D E +A+++ +L ++ D IR+ YW Y R + + + + + Sbjct: 316 ----EEDGSEGSAAEAVKMLTLLKEKYDPIRRNYWEYRIRQITASAAHATEISAS 366 >1DCE-A nrPDB Length = 567 Score = 231 bits (588), Expect = 5e-61, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 20/209 (9%) Query: 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKD-------- 147 ++ Q E E +LT + N T+W+ RR +L+ L+ + Sbjct: 28 YQSATQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAA 87 Query: 148 -LHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDP--SQELEFIADILNQDAKNYHAWQ 204 + E+ ++ + + PK+Y WHHR L+ L +P ++ELE A L D +N+H W Sbjct: 88 LVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWD 147 Query: 205 HRQW-VIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVI--------SNTTGYNDRAV 255 +R++ Q EL + D L+ + N S W+ R ++ S G V Sbjct: 148 YRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENV 207 Query: 256 LEREVQYTLEMIKLVPHNESAWNYLKGIL 284 L +E++ P+++SAW Y + +L Sbjct: 208 LLKELELVQNAFFTDPNDQSAWFYHRWLL 236 Score = 61.7 bits (148), Expect = 5e-10, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 14/117 (11%) Query: 115 RAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRV 174 R +L +E + N+ W +RR + EE+ + ++I NY WH+R Sbjct: 127 RELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSC 186 Query: 175 LVEWL-RDP-------------SQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWD 217 L+ L P +ELE + + D + AW + +W++ + D Sbjct: 187 LLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAEPHD 243 >3C72-A nrPDB Length = 334 Score = 225 bits (574), Expect = 2e-59, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 20/209 (9%) Query: 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKD-------- 147 ++ Q E E +LT + N T+W+ RR +L+ L+ + Sbjct: 32 YQSATQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAA 91 Query: 148 -LHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDP--SQELEFIADILNQDAKNYHAWQ 204 + E+ ++ + + PK+Y WHHR L+ L +P ++ELE A L D +N+H W Sbjct: 92 LVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWD 151 Query: 205 HRQW-VIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVI--------SNTTGYNDRAV 255 +R++ Q EL + D L+ + N S W+ R ++ S G V Sbjct: 152 YRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENV 211 Query: 256 LEREVQYTLEMIKLVPHNESAWNYLKGIL 284 L +E++ P+++SAW Y + +L Sbjct: 212 LLKELELVQNAFFTDPNDQSAWFYHRWLL 240 Score = 35.5 bits (80), Expect = 0.043, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 13/74 (17%) Query: 117 FKLTRDAIELNAANYTVWHFRRVLLKSL-------------QKDLHEEMNYITAIIEEQP 163 T I N +NY+ WH+R LL L + L +E+ + P Sbjct: 168 LAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDP 227 Query: 164 KNYQVWHHRRVLVE 177 + W + R L+ Sbjct: 228 NDQSAWFYHRWLLG 241 >5G04-F nrPDB Length = 824 Score = 40.9 bits (94), Expect = 0.001, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 57/137 (41%), Gaps = 1/137 (0%) Query: 90 IIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLH 149 I + Y E ++A R+AI +N +Y W+ ++ +K Sbjct: 594 IQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHYNAWYGLGMIYYKQEKFSL 653 Query: 150 EEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWV 209 EM++ ++ P++ + H V+ L+ + L+ + + D KN HR V Sbjct: 654 AEMHF-QKALDINPQSSVLLCHIGVVQHALKKSEKALDTLNKAIVIDPKNPLCKFHRASV 712 Query: 210 IQEFKLWDNELQYVDQL 226 + + + + LQ +++L Sbjct: 713 LFANEKYKSALQELEEL 729 >4RI1-A nrPDB Length = 186 Score = 34.3 bits (77), Expect = 0.084, Method: Composition-based stats. Identities = 29/148 (19%), Positives = 53/148 (35%), Gaps = 13/148 (8%) Query: 208 WVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMI 267 W+ F LQ+++ D++N+ N RYF+ Y + + + Sbjct: 44 WMYSTFISLKTHLQFIE-----DLKNSP--NHRYFLFKEEGVYLGVGSITKINFFHKHGY 96 Query: 268 KLVPHNESAWNYLKGILQDRGLSKYPNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQC 327 + N N + IL+ + L L+ ++ IAF YE Sbjct: 97 LGIYKNPFLKNGGETILKALEFIAFEEFQLHSLHLEVMENNFKAIAF----YEKNHYELE 152 Query: 328 DNKEDILNKALELCEILAKEKDTIRKEY 355 + ++K E ++L KD +K Y Sbjct: 153 GRLKGFISKDKEFIDVLLYYKD--KKGY 178 >3J9M-A1 nrPDB Length = 323 Score = 34.3 bits (77), Expect = 0.098, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 84/251 (33%), Gaps = 30/251 (11%) Query: 2 AATEGVGEAAQGGEPGQPAQPPPQPHPP--PPQQQHKEEMAAEAGEAVASPMDDGFVSLD 59 A + V A P P + P PP E+MA + P+ F Sbjct: 21 AFSTAVYSATPVPTPSLPERTPGNERPPRRKALPPRTEKMAVDQDWPSVYPVAAPF---- 76 Query: 60 SPSYVLYRDRAEWADIDPVPQNDGPN-------------PVVQIIYSDKFRDVYDYFRAV 106 PS V R + VP N PV + + +D + A Sbjct: 77 KPSAVPLPVRMGYPVKKGVPMAKEGNLELLKIPNFLHLTPVAIKKHCEALKDFCTEWPAA 136 Query: 107 LQRDERSERAFKLTRDAIELNAANYTVWHFRRVL------LKSLQKDLHEEMNYITAIIE 160 L DE+ E+ F + D+ + ++ +V + R + L SL D H + I + E Sbjct: 137 LDSDEKCEKHFPIEIDSTDYVSSGPSVRNPRARVVVLRVKLSSLNLDDHAKKKLIKLVGE 196 Query: 161 EQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNEL 220 K V + ++ R P + + + + +W +W + + E Sbjct: 197 RYCKTTDV-----LTIKTDRCPLRRQNYDYAVYLLTVLYHESWNTEEWEKSKTEADMEEY 251 Query: 221 QYVDQLLKEDV 231 + + + ++ Sbjct: 252 IWENSSSERNI 262 >5WC4-A nrPDB Length = 390 Score = 33.2 bits (74), Expect = 0.21, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 26/53 (49%) Query: 80 QNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYT 132 Q D P+ + ++ ++ D+ + F + ++ +R LT + ++ N YT Sbjct: 30 QKDYPDFLFRVTKNEHRTDLREKFDRICEKSRTKKRYLHLTEEMLKANPNIYT 82 >5J8N-A nrPDB Length = 258 Score = 33.2 bits (74), Expect = 0.22, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 23/47 (48%) Query: 191 DILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVW 237 + N + NY W +R W + +V + L+E+V++ S++ Sbjct: 194 RMFNPEGGNYSWWSYRTGARSRNVGWRLDYVFVSENLRENVKSASIY 240 >1W3B-A nrPDB Length = 388 Score = 32.8 bits (73), Expect = 0.27, Method: Composition-based stats. Identities = 49/256 (19%), Positives = 95/256 (37%), Gaps = 29/256 (11%) Query: 94 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMN 153 F D Y A L E A + A++ N Y V LLK+L + + Sbjct: 98 PDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKAC 157 Query: 154 YITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEF 213 Y+ AI E QP W + + + + + D A+ + V++E Sbjct: 158 YLKAI-ETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEA 216 Query: 214 KLWDNEL-QYVDQLLKEDVRNNSVWNQRYFVISNTTG--YNDRAVLEREVQYTLEMIKLV 270 +++D + Y+ L + + V+ Y ++ +++ + I+L Sbjct: 217 RIFDRAVAAYLRAL---------SLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ 267 Query: 271 PHNESAWNYLKGILQDRG-LSKYPNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCD- 328 PH A+ L L+++G +++ + N L L P+H D L N + Sbjct: 268 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTH-------------ADSLNNLANI 314 Query: 329 -NKEDILNKALELCEI 343 ++ + +A+ L Sbjct: 315 KREQGNIEEAVRLYRK 330 >5ZLM-A nrPDB Length = 513 Score = 32.4 bits (72), Expect = 0.30, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 10/58 (17%) Query: 15 EPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVASPMDDGFVSLDSPSYVLYRDRAEW 72 E G+ + P PPP ++ K+ + A AGE + + ++ Y R W Sbjct: 443 ESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRI----------AATFGPYSGRYVW 490 >2WW2-A nrPDB Length = 737 Score = 32.0 bits (71), Expect = 0.41, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 49/139 (35%), Gaps = 13/139 (9%) Query: 147 DLHEEMNYIT--AIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQ 204 + ++++ Y+ + E K + + + + + + + IAD Q A NY Sbjct: 428 EYYDKLGYVPYPEVPEATAKTLE-YAYADWCIARFAESLGKQD-IADQYYQKAPNYRNLY 485 Query: 205 HRQ----WVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREV 260 + + W W + + S W+ + V + G ++ + Sbjct: 486 YPEHGFMWTKDAKGNWRDRFDATE--WGGPFTEGSSWHWTWSVFHDPEGLSELMGGHEPM 543 Query: 261 QYTLEMIKLVPHNESAWNY 279 L+ + + P+ +NY Sbjct: 544 IARLDSMFVAPN---TYNY 559 >4WUM-A nrPDB Length = 389 Score = 31.7 bits (70), Expect = 0.53, Method: Composition-based stats. Identities = 9/51 (17%), Positives = 26/51 (50%) Query: 78 VPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNA 128 + Q++ P+ ++ S+ ++ + F+ + ++ +R LT D ++ N Sbjct: 31 IEQSEYPDYYFRVTNSEDKVELKEKFKRMCEKSMIKKRYLYLTEDILKENP 81 >6GAZ-Ao nrPDB Length = 692 Score = 31.7 bits (70), Expect = 0.54, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 26/77 (33%), Gaps = 1/77 (1%) Query: 258 REVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLLDLQPSHSSPYLIAFLVD 317 + Y + + AW L + + + LLN+ LD + SSP LV Sbjct: 577 SSLNYVAVLFLRAGRTQEAWKMLGLFRKHNKIPR-AELLNEFLDSAKASSSPAQAIELVK 635 Query: 318 IYEDMLENQCDNKEDIL 334 + C+ + Sbjct: 636 LASAFSLPVCEGLTRRV 652 >6GAW-Ao nrPDB Length = 692 Score = 31.7 bits (70), Expect = 0.56, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 26/77 (33%), Gaps = 1/77 (1%) Query: 258 REVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLLDLQPSHSSPYLIAFLVD 317 + Y + + AW L + + + LLN+ LD + SSP LV Sbjct: 577 SSLNYVAVLFLRAGRTQEAWKMLGLFRKHNKIPR-AELLNEFLDSAKASSSPAQAIELVK 635 Query: 318 IYEDMLENQCDNKEDIL 334 + C+ + Sbjct: 636 LASAFSLPVCEGLTRRV 652 >1Y6Z-A nrPDB Length = 263 Score = 31.7 bits (70), Expect = 0.62, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 42/107 (39%), Gaps = 11/107 (10%) Query: 192 ILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYN 251 I QD K+ + + FK +D+ L YV ++ + NS+ ++ + Sbjct: 6 IWKQDEKSLTENDYYSFYKNTFKAYDDPLAYVHFNVEGQISFNSI----LYIPGSLPWEL 61 Query: 252 DRAVLEREVQ----YTLEMIKLVPHNESA--W-NYLKGILQDRGLSK 291 + + + E + Y + +ES W +L+GI+ L Sbjct: 62 SKNMFDEESRGIRLYVKRVFINDKFSESIPRWLTFLRGIVDSENLPL 108 >4I80-A nrPDB Length = 550 Score = 31.3 bits (69), Expect = 0.66, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 4/56 (7%) Query: 7 VGEAAQGGEPGQPAQPPPQPHPPPPQQQ----HKEEMAAEAGEAVASPMDDGFVSL 58 V A+G E G AQ P PPP+ E+M VA+ ++ + L Sbjct: 462 VAGTARGPEGGSTAQVPAPTASPPPEGPVLTFQSEKMKGMKELLVATKINSSAIKL 517 >2GWR-A nrPDB Length = 238 Score = 31.3 bits (69), Expect = 0.67, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 8/59 (13%) Query: 225 QLLKEDVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGI 283 Q+ DV VW R+ D ++ VQ ++ P N + ++G+ Sbjct: 171 QVFTRDVLLEQVWGYRH--------PADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGV 221 >4YJY-A nrPDB Length = 398 Score = 31.3 bits (69), Expect = 0.68, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 25/51 (49%) Query: 78 VPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNA 128 V Q D P+ +I S+ ++ + F+ + + + +R LT + ++ N Sbjct: 34 VYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYMHLTEEILQENP 84 >1XET-A nrPDB Length = 413 Score = 31.3 bits (69), Expect = 0.74, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 25/52 (48%) Query: 78 VPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA 129 V Q+ P+ +I ++ ++ D F+ + +R +R LT + ++ N Sbjct: 53 VDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPD 104 >6DXA-A nrPDB Length = 396 Score = 30.9 bits (68), Expect = 0.87, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 24/51 (47%) Query: 78 VPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNA 128 V Q+ P+ +I S+ ++ + FR + + +R LT + ++ N Sbjct: 36 VDQSSYPDYYFKITNSEHMTELKEKFRRMCDKSAIKKRYMYLTEEILKENP 86 >6MZC-I nrPDB Length = 677 Score = 30.9 bits (68), Expect = 0.92, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 9/40 (22%) Query: 10 AAQGGEPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVAS 49 + +G +P P PPP P KE+ AEA E + S Sbjct: 137 SIEGCQPAIPENPPPAP---------KEQQKAEATEPLKS 167 >4UUD-B nrPDB Length = 864 Score = 30.5 bits (67), Expect = 1.3, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%) Query: 13 GGEPGQPAQPPPQPHP--PPPQQQHKEEMA 40 GG P P++P P P PPPQ + A Sbjct: 810 GGAPPVPSRPGASPDPFGPPPQVPSRPNRA 839 >1UOU-A nrPDB Length = 474 Score = 30.1 bits (66), Expect = 1.8, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 11 AQGGEPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVASPMDDGFVS 57 A G G+ +Q P P P P Q M + G + + GFV+ Sbjct: 8 APGDFSGEGSQGLPDPSPEPKQLPELIRMKRDGGRLSEADI-RGFVA 53 >5NNP-A nrPDB Length = 745 Score = 29.7 bits (65), Expect = 2.1, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 32/86 (37%) Query: 136 FRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQ 195 FR V+ K + I+++ PK+ + +++ + + L Sbjct: 14 FRTVIRHYEDKQYKRGLKAAEQILKKNPKHGDTMSMKALILNAQGKTEEAFALAKEALTI 73 Query: 196 DAKNYHAWQHRQWVIQEFKLWDNELQ 221 D K+Y W + + K +D ++ Sbjct: 74 DMKSYICWHVYGILYRTNKNFDEAIK 99 >4AXG-A nrPDB Length = 248 Score = 29.7 bits (65), Expect = 2.3, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 17/49 (34%) Query: 1 MAATEGVGEAAQGGEPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVAS 49 M E +A E G+P P P + +E E GE + Sbjct: 1 MVVLETEKTSAPSTEQGRPEPPTSAAAPAEAKDVKPKEDPQETGEPAGN 49 >6AHD-v nrPDB Length = 464 Score = 29.3 bits (64), Expect = 2.4, Method: Composition-based stats. Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%) Query: 4 TEGVGEAAQGGEPGQPAQPPPQP--HPPPP 31 T GV A G P P PP P HPP P Sbjct: 326 TSGVHPPAPGVHPPAPGVHPPAPGVHPPAP 355 Score = 27.8 bits (60), Expect = 9.1, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 12/35 (34%), Gaps = 3/35 (8%) Query: 4 TEGVGEAAQGGEPGQPAQPPPQP---HPPPPQQQH 35 + GV A G P PA P P P P Sbjct: 369 SAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQ 403 >4QDM-A nrPDB Length = 355 Score = 28.6 bits (62), Expect = 4.5, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 29/86 (33%), Gaps = 7/86 (8%) Query: 28 PPPPQQQHKEEMAAEAGEAVASPMDDGF-------VSLDSPSYVLYRDRAEWADIDPVPQ 80 PP P + + E +A A + F L S ++ D W D Sbjct: 269 PPRPAFPTYDAIPQERFQAQADRYNQLFELYEELDADLSSVTFWGIADNHTWLDDRAREY 328 Query: 81 NDGPNPVVQIIYSDKFRDVYDYFRAV 106 NDG ++ +R ++R + Sbjct: 329 NDGVGKDAPFVFDPNYRVKPAFWRII 354 >6AHR-F nrPDB Length = 199 Score = 28.2 bits (61), Expect = 6.2, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 13/34 (38%) Query: 15 EPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVA 48 +P QP PP PHP P GE A Sbjct: 145 DPRQPGYQPPNPHPGPSSPPAAPASKRSLGEPAA 178 >3AJA-A nrPDB Length = 302 Score = 27.8 bits (60), Expect = 9.2, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 24/117 (20%) Query: 16 PGQPAQPPPQPHP------------PPPQQQHKE----EMAAEAGEAVASPMDDGFVSLD 59 P PA PPP P P P+ Q + M + G +SP DD F Sbjct: 4 PDTPATPPPSAEPPGGVVVPPGTRKPRPEFQSADCPDVMMVSIPGTWESSPTDDPF---- 59 Query: 60 SPSYVLYRDRAEWADIDPVPQNDGPN--PVVQIIYSDKFRDVYDYFRAVLQRDERSE 114 +P+ + + P+ + GP+ V Y+ +F + + + + D R+E Sbjct: 60 NPTQFPLSLMSNIS--KPLAEQFGPDRLQVYTTPYTAQFHNPFAADKQMSYNDSRAE 114 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.301 0.127 0.352 Lambda K H 0.267 0.0382 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,655,424 Number of Sequences: 36641 Number of extensions: 582344 Number of successful extensions: 4187 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 113 Number of HSP's successfully gapped in prelim test: 51 Number of HSP's that attempted gapping in prelim test: 2824 Number of HSP's gapped (non-prelim): 740 length of query: 379 length of database: 10,336,785 effective HSP length: 99 effective length of query: 280 effective length of database: 6,709,326 effective search space: 1878611280 effective search space used: 1878611280 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.8 bits) S2: 60 (27.8 bits)