BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P48775 (406 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6A4I-A nrPDB 761 0.0 4HKA-A nrPDB 417 e-117 2NOX-A nrPDB 105 4e-23 2NW9-A nrPDB 93 2e-19 2IJA-A nrPDB 32 0.65 4C44-A nrPDB 30 1.8 4ML1-A nrPDB 28 8.4 >6A4I-A nrPDB Length = 391 Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/371 (99%), Positives = 371/371 (100%) Query: 18 LPVEGSEEDKSQTGVNRASKGGLIYGNYLHLEKVLNAQELQSETKGNKIHDEHLFIITHQ 77 +PVEGSEEDKSQTGVNRASKGGLIYGNYLHLEKVLNAQELQSETKGNKIHDEHLFIITHQ Sbjct: 21 MPVEGSEEDKSQTGVNRASKGGLIYGNYLHLEKVLNAQELQSETKGNKIHDEHLFIITHQ 80 Query: 78 AYELWFKQILWELDSVREIFQNGHVRDERNMLKVVSRMHRVSVILKLLVQQFSILETMTA 137 AYELWFKQILWELDSVREIFQNGHVRDERNMLKVVSRMHRVSVILKLLVQQFSILETMTA Sbjct: 81 AYELWFKQILWELDSVREIFQNGHVRDERNMLKVVSRMHRVSVILKLLVQQFSILETMTA 140 Query: 138 LDFNDFREYLSPASGFQSLQFRLLENKIGVLQNMRVPYNRRHYRDNFKGEENELLLKSEQ 197 LDFNDFREYLSPASGFQSLQFRLLENKIGVLQNMRVPYNRRHYRDNFKGEENELLLKSEQ Sbjct: 141 LDFNDFREYLSPASGFQSLQFRLLENKIGVLQNMRVPYNRRHYRDNFKGEENELLLKSEQ 200 Query: 198 EKTLLELVEAWLERTPGLEPHGFNFWGKLEKNITRGLEEEFIRIQAKEESEEKEEQVAEF 257 EKTLLELVEAWLERTPGLEPHGFNFWGKLEKNITRGLEEEFIRIQAKEESEEKEEQVAEF Sbjct: 201 EKTLLELVEAWLERTPGLEPHGFNFWGKLEKNITRGLEEEFIRIQAKEESEEKEEQVAEF 260 Query: 258 QKQKEVLLSLFDEKRHEHLLSKGERRLSYRALQGALMIYFYREEPRFQVPFQLLTSLMDI 317 QKQKEVLLSLFDEKRHEHLLSKGERRLSYRALQGALMIYFYREEPRFQVPFQLLTSLMDI Sbjct: 261 QKQKEVLLSLFDEKRHEHLLSKGERRLSYRALQGALMIYFYREEPRFQVPFQLLTSLMDI 320 Query: 318 DSLMTKWRYNHVCMVHRMLGSKAGTGGSSGYHYLRSTVSDRYKVFVDLFNLSTYLIPRHW 377 DSLMTKWRYNHVCMVHRMLGSKAGTGGSSGYHYLRSTVSDRYKVFVDLFNLSTYLIPRHW Sbjct: 321 DSLMTKWRYNHVCMVHRMLGSKAGTGGSSGYHYLRSTVSDRYKVFVDLFNLSTYLIPRHW 380 Query: 378 IPKMNPTIHKF 388 IPKMNPTIHKF Sbjct: 381 IPKMNPTIHKF 391 >4HKA-A nrPDB Length = 366 Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust. Identities = 210/354 (59%), Positives = 267/354 (75%), Gaps = 4/354 (1%) Query: 38 GGLIYGNYLHLEKVLNAQELQSETKGNKIHDEHLFIITHQAYELWFKQILWELDSVREIF 97 GG IYG YL L+K+L+AQ + SE +HDEHLFIITHQAYELWFKQI++E DS+R++ Sbjct: 2 GGKIYGEYLMLDKLLDAQCMLSEEDKRPVHDEHLFIITHQAYELWFKQIIFEFDSIRDML 61 Query: 98 QNGHVRDERNMLKVVSRMHRVSVILKLLVQQFSILETMTALDFNDFREYLSPASGFQSLQ 157 + V DE L++V R++RV +ILKLLV Q ILETMT LDF DFR+YL+PASGFQSLQ Sbjct: 62 -DAEVIDETKTLEIVKRLNRVVLILKLLVDQVPILETMTPLDFMDFRKYLAPASGFQSLQ 120 Query: 158 FRLLENKIGVLQNMRVPYNRRHYRDNFKGEENELLLK-SEQEKTLLELVEAWLERTPGLE 216 FRL+ENK+GVL RV YN++ Y D F EE ++ SE++ +LLELV+ WLERTPGLE Sbjct: 121 FRLIENKLGVLTEQRVRYNQK-YSDVFSDEEARNSIRNSEKDPSLLELVQRWLERTPGLE 179 Query: 217 PHGFNFWGKLEKNITRGLEEEFIRIQAKEESEEKEEQVAEFQKQKEVLLSLFDEKRHEHL 276 GFNFW K ++++ R LE + + + K ++ + +K++EV S+FD H+ L Sbjct: 180 ESGFNFWAKFQESVDRFLEAQVQSAMEEPVEKAKNYRLMDIEKRREVYRSIFDPAVHDAL 239 Query: 277 LSKGERRLSYRALQGALMIYFYREEPRFQVPFQLLTSLMDIDSLMTKWRYNHVCMVHRML 336 + +G+RR S+RALQGA+MI FYR+EPRF P QLLT LMDIDSL+TKWRYNHV MV RM+ Sbjct: 240 VRRGDRRFSHRALQGAIMITFYRDEPRFSQPHQLLTLLMDIDSLITKWRYNHVIMVQRMI 299 Query: 337 GSKA-GTGGSSGYHYLRSTVSDRYKVFVDLFNLSTYLIPRHWIPKMNPTIHKFL 389 GS+ GTGGSSGY YLRST+SDRYKVF+DLFNLST+LIPR IP ++ TI K L Sbjct: 300 GSQQLGTGGSSGYQYLRSTLSDRYKVFLDLFNLSTFLIPREAIPPLDETIRKKL 353 >2NOX-A nrPDB Length = 281 Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 94/334 (28%), Positives = 146/334 (43%), Gaps = 76/334 (22%) Query: 40 LIYGNYLHLEKVLNAQELQSETKGNKIHDEHLFIITHQAYELWFKQILWELDSVREIFQN 99 + YG+YL L+++L+AQ S H+E LFI+ HQ ELW K +L EL + R+ ++ Sbjct: 23 MSYGDYLGLDQILSAQHPLSPD-----HNEMLFIVQHQTTELWMKLMLHELRAARDGVKS 77 Query: 100 GHVRDERNMLKVVSRMHRVSVILKLLVQQFSILETMTALDFNDFREYLSPASGFQSLQFR 159 ++ ML VSR I+ LVQ +++L TMT +++ R YL +SGFQS Q+R Sbjct: 78 DQLQPAFKMLARVSR------IMDQLVQAWNVLATMTPPEYSAMRPYLGASSGFQSYQYR 131 Query: 160 LLENKIGVLQNMRVPYNRRHYRDNFKGEENELLLKSEQEKT-LLELVEAWLERTPGLEPH 218 +E + G +N +L+ + LELVE L Sbjct: 132 EIEFIL--------------------GNKNAAMLRPHAHRPEHLELVETALH-------- 163 Query: 219 GFNFWGKLEKNITRGLEEEFIRIQAKEESEEKEEQVAEFQKQKEVLLSLFDEKRHEHLLS 278 T + +E IR+ A+ FQ EV+ + + Sbjct: 164 ------------TPSMYDEAIRLMARR----------GFQIDPEVVERDWTQPTQ----- 196 Query: 279 KGERRLSYRALQGALMIYFYREEPRFQVPFQLLTSLMDIDSLMTKWRYNHVCMVHRMLGS 338 Y A A + YR ++L +D++ +WR+ HV V R++G Sbjct: 197 -------YNASVEAAWLEVYRNPSAHWELYELGEKFVDLEDAFRQWRFRHVTTVERVIGF 249 Query: 339 KAGTGGSSGYHYLRSTVSDRYKVFVDLFNLSTYL 372 K GTGG+ G YLR + +F +L+ L T L Sbjct: 250 KRGTGGTEGVSYLRRMLD--VVLFPELWKLRTDL 281 >2NW9-A nrPDB Length = 306 Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 58/149 (38%), Positives = 86/149 (57%), Gaps = 10/149 (6%) Query: 18 LPVEGSEEDKSQTGVNRASKGGLIYGNYLHLEKVLNAQELQSETKGNKIHDEHLFIITHQ 77 +PV+ + D + G++ +G L YG YL L+++L+AQ+ SE HDE LFII HQ Sbjct: 1 MPVDKNLRDL-EPGIHTDLEGRLTYGGYLRLDQLLSAQQPLSEPAH---HDEMLFIIQHQ 56 Query: 78 AYELWFKQILWELDSVREIFQNGHVRDERNMLKVVSRMHRVSVILKLLVQQFSILETMTA 137 ELW K + EL + Q V R +L R +L+ L +Q+S+LET+T Sbjct: 57 TSELWLKLLAHELRAAIVHLQRDEVWQCRKVLA------RSKQVLRQLTEQWSVLETLTP 110 Query: 138 LDFNDFREYLSPASGFQSLQFRLLENKIG 166 ++ FR+ L P+SGFQSLQ+R +E +G Sbjct: 111 SEYMGFRDVLGPSSGFQSLQYRYIEFLLG 139 Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%) Query: 297 FYREEPRFQVPFQLLTSLMDIDSLMTKWRYNHVCMVHRMLGSKAGTGGSSGYHYLRSTVS 356 Y R+ + L L+D+++ WR+ H+ V R++G K GTGGSSG +L+ ++ Sbjct: 209 IYENTDRYWREYSLCEDLVDVETQFQLWRFRHMRTVMRVIGFKRGTGGSSGVGFLQQALA 268 Query: 357 DRYKVFVDLFNLST 370 F +LF++ T Sbjct: 269 --LTFFPELFDVRT 280 >2IJA-A nrPDB Length = 295 Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust. Identities = 33/97 (34%), Positives = 45/97 (46%), Gaps = 7/97 (7%) Query: 132 LETMTALDFNDFREYL--SPASGFQSLQFRLLENKIGV--LQNMRVPYNRRHYRDNFKGE 187 L+ T DF YL SP+S F S F L+ GV L + + R +Y+DN Sbjct: 199 LKPRTIEDFESMNTYLQTSPSSVFTSKSFCSLQTPDGVHCLVGFTLTHRRFNYKDNTDLI 258 Query: 188 ENELLLKSEQEKTLLELVEAWLERTPGLEP-HGFNFW 223 E + L + E EK L + L+R L P HG F+ Sbjct: 259 EFKTLSEEEIEKVLKNIFNISLQRK--LVPKHGDRFF 293 >4C44-A nrPDB Length = 175 Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust. Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%) Query: 20 VEGSEEDKSQTGVNRASKGGLIYGNYLHLEKVLNAQELQSETKGNK--IHDEHLFIITHQ 77 V EE+ Q+ + ++K I Y + + L S+ KG+ I F +THQ Sbjct: 47 VYDDEEEWFQSIFSNSNKEDAIQNQYEFFVQRMGGPPLYSQRKGHPALIGRHRPFPVTHQ 106 Query: 78 AYELWFKQILWELDSVREIFQNGHVR 103 A E W + + LD +I Q+ ++ Sbjct: 107 AAERWLEHMQNALDDSVDIDQDSKIK 132 >4ML1-A nrPDB Length = 217 Score = 27.7 bits (60), Expect = 8.4, Method: Compositional matrix adjust. Identities = 10/32 (31%), Positives = 20/32 (62%) Query: 72 FIITHQAYELWFKQILWELDSVREIFQNGHVR 103 F+I+ Q Y+LW K+ L + +R++ + H + Sbjct: 46 FVISGQIYDLWSKKPLNTMSQMRDVAERIHFK 77 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6A4I-A nrPDB 591 e-169 4HKA-A nrPDB 497 e-141 2NOX-A nrPDB 341 3e-94 2NW9-A nrPDB 296 1e-80 Sequences not found previously or not previously below threshold: 4KR6-A nrPDB 32 0.34 5U8S-7 nrPDB 30 2.1 4C44-A nrPDB 29 3.4 5OWV-A nrPDB 29 3.7 5IX2-A nrPDB 29 3.7 3WEC-A nrPDB 29 4.8 CONVERGED! >6A4I-A nrPDB Length = 391 Score = 591 bits (1522), Expect = e-169, Method: Composition-based stats. Identities = 370/371 (99%), Positives = 371/371 (100%) Query: 18 LPVEGSEEDKSQTGVNRASKGGLIYGNYLHLEKVLNAQELQSETKGNKIHDEHLFIITHQ 77 +PVEGSEEDKSQTGVNRASKGGLIYGNYLHLEKVLNAQELQSETKGNKIHDEHLFIITHQ Sbjct: 21 MPVEGSEEDKSQTGVNRASKGGLIYGNYLHLEKVLNAQELQSETKGNKIHDEHLFIITHQ 80 Query: 78 AYELWFKQILWELDSVREIFQNGHVRDERNMLKVVSRMHRVSVILKLLVQQFSILETMTA 137 AYELWFKQILWELDSVREIFQNGHVRDERNMLKVVSRMHRVSVILKLLVQQFSILETMTA Sbjct: 81 AYELWFKQILWELDSVREIFQNGHVRDERNMLKVVSRMHRVSVILKLLVQQFSILETMTA 140 Query: 138 LDFNDFREYLSPASGFQSLQFRLLENKIGVLQNMRVPYNRRHYRDNFKGEENELLLKSEQ 197 LDFNDFREYLSPASGFQSLQFRLLENKIGVLQNMRVPYNRRHYRDNFKGEENELLLKSEQ Sbjct: 141 LDFNDFREYLSPASGFQSLQFRLLENKIGVLQNMRVPYNRRHYRDNFKGEENELLLKSEQ 200 Query: 198 EKTLLELVEAWLERTPGLEPHGFNFWGKLEKNITRGLEEEFIRIQAKEESEEKEEQVAEF 257 EKTLLELVEAWLERTPGLEPHGFNFWGKLEKNITRGLEEEFIRIQAKEESEEKEEQVAEF Sbjct: 201 EKTLLELVEAWLERTPGLEPHGFNFWGKLEKNITRGLEEEFIRIQAKEESEEKEEQVAEF 260 Query: 258 QKQKEVLLSLFDEKRHEHLLSKGERRLSYRALQGALMIYFYREEPRFQVPFQLLTSLMDI 317 QKQKEVLLSLFDEKRHEHLLSKGERRLSYRALQGALMIYFYREEPRFQVPFQLLTSLMDI Sbjct: 261 QKQKEVLLSLFDEKRHEHLLSKGERRLSYRALQGALMIYFYREEPRFQVPFQLLTSLMDI 320 Query: 318 DSLMTKWRYNHVCMVHRMLGSKAGTGGSSGYHYLRSTVSDRYKVFVDLFNLSTYLIPRHW 377 DSLMTKWRYNHVCMVHRMLGSKAGTGGSSGYHYLRSTVSDRYKVFVDLFNLSTYLIPRHW Sbjct: 321 DSLMTKWRYNHVCMVHRMLGSKAGTGGSSGYHYLRSTVSDRYKVFVDLFNLSTYLIPRHW 380 Query: 378 IPKMNPTIHKF 388 IPKMNPTIHKF Sbjct: 381 IPKMNPTIHKF 391 >4HKA-A nrPDB Length = 366 Score = 497 bits (1279), Expect = e-141, Method: Composition-based stats. Identities = 210/354 (59%), Positives = 267/354 (75%), Gaps = 4/354 (1%) Query: 38 GGLIYGNYLHLEKVLNAQELQSETKGNKIHDEHLFIITHQAYELWFKQILWELDSVREIF 97 GG IYG YL L+K+L+AQ + SE +HDEHLFIITHQAYELWFKQI++E DS+R++ Sbjct: 2 GGKIYGEYLMLDKLLDAQCMLSEEDKRPVHDEHLFIITHQAYELWFKQIIFEFDSIRDML 61 Query: 98 QNGHVRDERNMLKVVSRMHRVSVILKLLVQQFSILETMTALDFNDFREYLSPASGFQSLQ 157 + V DE L++V R++RV +ILKLLV Q ILETMT LDF DFR+YL+PASGFQSLQ Sbjct: 62 -DAEVIDETKTLEIVKRLNRVVLILKLLVDQVPILETMTPLDFMDFRKYLAPASGFQSLQ 120 Query: 158 FRLLENKIGVLQNMRVPYNRRHYRDNFKGEENELLLK-SEQEKTLLELVEAWLERTPGLE 216 FRL+ENK+GVL RV YN++ Y D F EE ++ SE++ +LLELV+ WLERTPGLE Sbjct: 121 FRLIENKLGVLTEQRVRYNQK-YSDVFSDEEARNSIRNSEKDPSLLELVQRWLERTPGLE 179 Query: 217 PHGFNFWGKLEKNITRGLEEEFIRIQAKEESEEKEEQVAEFQKQKEVLLSLFDEKRHEHL 276 GFNFW K ++++ R LE + + + K ++ + +K++EV S+FD H+ L Sbjct: 180 ESGFNFWAKFQESVDRFLEAQVQSAMEEPVEKAKNYRLMDIEKRREVYRSIFDPAVHDAL 239 Query: 277 LSKGERRLSYRALQGALMIYFYREEPRFQVPFQLLTSLMDIDSLMTKWRYNHVCMVHRML 336 + +G+RR S+RALQGA+MI FYR+EPRF P QLLT LMDIDSL+TKWRYNHV MV RM+ Sbjct: 240 VRRGDRRFSHRALQGAIMITFYRDEPRFSQPHQLLTLLMDIDSLITKWRYNHVIMVQRMI 299 Query: 337 GSKA-GTGGSSGYHYLRSTVSDRYKVFVDLFNLSTYLIPRHWIPKMNPTIHKFL 389 GS+ GTGGSSGY YLRST+SDRYKVF+DLFNLST+LIPR IP ++ TI K L Sbjct: 300 GSQQLGTGGSSGYQYLRSTLSDRYKVFLDLFNLSTFLIPREAIPPLDETIRKKL 353 >2NOX-A nrPDB Length = 281 Score = 341 bits (875), Expect = 3e-94, Method: Composition-based stats. Identities = 95/343 (27%), Positives = 147/343 (42%), Gaps = 76/343 (22%) Query: 31 GVNRASKGGLIYGNYLHLEKVLNAQELQSETKGNKIHDEHLFIITHQAYELWFKQILWEL 90 G + YG+YL L+++L+AQ S H+E LFI+ HQ ELW K +L EL Sbjct: 14 GAQMDFARDMSYGDYLGLDQILSAQHPLSPD-----HNEMLFIVQHQTTELWMKLMLHEL 68 Query: 91 DSVREIFQNGHVRDERNMLKVVSRMHRVSVILKLLVQQFSILETMTALDFNDFREYLSPA 150 + R+ ++ ++ ML VSR I+ LVQ +++L TMT +++ R YL + Sbjct: 69 RAARDGVKSDQLQPAFKMLARVSR------IMDQLVQAWNVLATMTPPEYSAMRPYLGAS 122 Query: 151 SGFQSLQFRLLENKIGVLQNMRVPYNRRHYRDNFKGEENELLLKSEQEKT-LLELVEAWL 209 SGFQS Q+R +E +G +N +L+ + LELVE L Sbjct: 123 SGFQSYQYREIEFILG--------------------NKNAAMLRPHAHRPEHLELVETAL 162 Query: 210 ERTPGLEPHGFNFWGKLEKNITRGLEEEFIRIQAKEESEEKEEQVAEFQKQKEVLLSLFD 269 T + +E IR+ A+ FQ EV+ + Sbjct: 163 H--------------------TPSMYDEAIRLMARR----------GFQIDPEVVERDWT 192 Query: 270 EKRHEHLLSKGERRLSYRALQGALMIYFYREEPRFQVPFQLLTSLMDIDSLMTKWRYNHV 329 + Y A A + YR ++L +D++ +WR+ HV Sbjct: 193 QPTQ------------YNASVEAAWLEVYRNPSAHWELYELGEKFVDLEDAFRQWRFRHV 240 Query: 330 CMVHRMLGSKAGTGGSSGYHYLRSTVSDRYKVFVDLFNLSTYL 372 V R++G K GTGG+ G YLR + +F +L+ L T L Sbjct: 241 TTVERVIGFKRGTGGTEGVSYLRRMLD--VVLFPELWKLRTDL 281 >2NW9-A nrPDB Length = 306 Score = 296 bits (758), Expect = 1e-80, Method: Composition-based stats. Identities = 97/358 (27%), Positives = 155/358 (43%), Gaps = 83/358 (23%) Query: 18 LPVEGSEEDKSQTGVNRASKGGLIYGNYLHLEKVLNAQELQSETKGNKIHDEHLFIITHQ 77 +PV+ + D + G++ +G L YG YL L+++L+AQ+ SE HDE LFII HQ Sbjct: 1 MPVDKNLRDL-EPGIHTDLEGRLTYGGYLRLDQLLSAQQPLSEPAH---HDEMLFIIQHQ 56 Query: 78 AYELWFKQILWELDSVREIFQNGHVRDERNMLKVVSRMHRVSVILKLLVQQFSILETMTA 137 ELW K + EL + Q V R +L R +L+ L +Q+S+LET+T Sbjct: 57 TSELWLKLLAHELRAAIVHLQRDEVWQCRKVLA------RSKQVLRQLTEQWSVLETLTP 110 Query: 138 LDFNDFREYLSPASGFQSLQFRLLENKIGVLQNMRVPYNRRHYRDNFKGEENELLLK--- 194 ++ FR+ L P+SGFQSLQ+R +E +G +N +L+ Sbjct: 111 SEYMGFRDVLGPSSGFQSLQYRYIEFLLG--------------------NKNPQMLQVFA 150 Query: 195 --SEQEKTLLELVEAWLERTPGLEPHGFNFWGKLEKNITRGLEEEFIRIQAKEESEEKEE 252 + L E++EA L EEF+R A+ Sbjct: 151 YDPAGQARLREVLEA------------------------PSLYEEFLRYLAR-------- 178 Query: 253 QVAEFQKQKEVLLSLFDEKRHEHLLSKGERRLSYRALQGALMIYFYREEPRFQVPFQLLT 312 ++ + H+ R + R Y R+ + L Sbjct: 179 --FGHAIPQQYQARDWTAA---HVADDTLRPVFER---------IYENTDRYWREYSLCE 224 Query: 313 SLMDIDSLMTKWRYNHVCMVHRMLGSKAGTGGSSGYHYLRSTVSDRYKVFVDLFNLST 370 L+D+++ WR+ H+ V R++G K GTGGSSG +L+ ++ F +LF++ T Sbjct: 225 DLVDVETQFQLWRFRHMRTVMRVIGFKRGTGGSSGVGFLQQALA--LTFFPELFDVRT 280 >4KR6-A nrPDB Length = 388 Score = 32.5 bits (72), Expect = 0.34, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 6/89 (6%) Query: 132 LETMTALDFNDFREYLSPASGFQSLQFRLLENKIGVLQNMRVPYNRRHYRDNFKGEENEL 191 LE + +++ R + P SGF + +IG + PY F +N Sbjct: 297 LENLWSIESVTTRPVIRPLSGFDKTEIVEKAKEIGTYEISIKPYQD---SCVFFAPKNPA 353 Query: 192 LLKSEQEKTLLELVEAWLERTPGLEPHGF 220 + ++LE +E + P LE F Sbjct: 354 ---TRSHPSILEKLEQQVPDLPVLEEEAF 379 >5U8S-7 nrPDB Length = 845 Score = 29.8 bits (65), Expect = 2.1, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 52/139 (37%), Gaps = 7/139 (5%) Query: 160 LLENKIGVLQNMRVPYNRRHYRDNFKGEENELLLKSEQEKT------LLELVEAWLER-T 212 ++ + V+ N R N R D +E L+ + + L E+VE E Sbjct: 134 YKDDVLDVILNQRRLRNERMLSDRTNEIRSENLMDTTMDPPSSMNDALREVVEDETELFP 193 Query: 213 PGLEPHGFNFWGKLEKNITRGLEEEFIRIQAKEESEEKEEQVAEFQKQKEVLLSLFDEKR 272 P L F ++ L +N R ++ I + + K + + + + ++ + D K Sbjct: 194 PNLTRRYFLYFKPLSQNCARRYRKKAISSKPLSVRQIKGDFLGQLITVRGIITRVSDVKP 253 Query: 273 HEHLLSKGERRLSYRALQG 291 +++ + Y Q Sbjct: 254 AVEVIAYTCDQCGYEVFQE 272 >4C44-A nrPDB Length = 175 Score = 29.4 bits (64), Expect = 3.4, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%) Query: 20 VEGSEEDKSQTGVNRASKGGLIYGNYLHLEKVLNAQELQSETKGNK--IHDEHLFIITHQ 77 V EE+ Q+ + ++K I Y + + L S+ KG+ I F +THQ Sbjct: 47 VYDDEEEWFQSIFSNSNKEDAIQNQYEFFVQRMGGPPLYSQRKGHPALIGRHRPFPVTHQ 106 Query: 78 AYELWFKQILWELDSVREIFQNGHVR 103 A E W + + LD +I Q+ ++ Sbjct: 107 AAERWLEHMQNALDDSVDIDQDSKIK 132 >5OWV-A nrPDB Length = 732 Score = 29.0 bits (63), Expect = 3.7, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 50/114 (43%) Query: 145 EYLSPASGFQSLQFRLLENKIGVLQNMRVPYNRRHYRDNFKGEENELLLKSEQEKTLLEL 204 ++L ++ S ++ L +K + ++ + + + + GE++++ L++ +++ LEL Sbjct: 395 DFLCVSAKMASDFYKGLASKESLQKSGMQEFENYLFNELYAGEKSKIALRAYKKELHLEL 454 Query: 205 VEAWLERTPGLEPHGFNFWGKLEKNITRGLEEEFIRIQAKEESEEKEEQVAEFQ 258 E N G E+N LE + KE +E +A+ + Sbjct: 455 KNILSEYEMQNRLIKENKQGVSEENQKLLLELQKQNTLLKEAQDEISNSIAKLK 508 >5IX2-A nrPDB Length = 451 Score = 29.0 bits (63), Expect = 3.7, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 6/138 (4%) Query: 151 SGFQSLQFRLLENKIGVLQN---MRVPYNRRHYRDNFKGEENELLLKS-EQEKTLLELVE 206 +GF+S RL ++ + +N M V + + Y + K E + + + + + ++ L E Sbjct: 97 NGFKSGSMRLGKDAMVFTKNGETMSVGFLSQTYLEVIKAEHVVVPIVTFNKHRQMINLTE 156 Query: 207 AWLERTPGLEPHGFNFWGKLEKNITRGLEEEFIRIQAKEESEEKEEQVAEFQKQKEVLL- 265 + LE F+ KL + + ++ RI K +F+K K + Sbjct: 157 SKASLAAILEHSLFSTEQKLLAELNAIMGKKGTRIIIWNLRSYKNATEFDFEKDKYDIRI 216 Query: 266 -SLFDEKRHEHLLSKGER 282 DE K ER Sbjct: 217 PEDLDETAGRKGYKKQER 234 >3WEC-A nrPDB Length = 419 Score = 28.6 bits (62), Expect = 4.8, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 9 NNFGYTFKKLPVEGSEEDKSQTGVNRASKGGLIYGNYLHLEKVLNAQELQSETKGNKIHD 68 N F TFK P +++ ++R++ G I +Y +KVL ++ L + N Sbjct: 16 NPFDPTFKADPYPVYARLRTELPIHRSALGAWIVADYTSCDKVLRSR-LFGKDFANSTFF 74 Query: 69 EHL 71 +HL Sbjct: 75 DHL 77 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.123 0.325 Lambda K H 0.267 0.0381 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,564,332 Number of Sequences: 36641 Number of extensions: 555605 Number of successful extensions: 1653 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 1611 Number of HSP's gapped (non-prelim): 34 length of query: 406 length of database: 10,336,785 effective HSP length: 99 effective length of query: 307 effective length of database: 6,709,326 effective search space: 2059763082 effective search space used: 2059763082 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 60 (27.8 bits)