BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P48598 (259 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4AXG-A nrPDB 503 e-143 4UEC-A nrPDB 377 e-105 5GW6-A nrPDB 210 5e-55 4DUM-A nrPDB 208 2e-54 5ABX-A nrPDB 189 1e-48 3M94-A nrPDB 187 3e-48 6FC1-A nrPDB 145 2e-35 2IDR-A nrPDB 140 5e-34 2WMC-A nrPDB 140 5e-34 6FBZ-A nrPDB 134 4e-32 5ME5-A nrPDB 133 8e-32 5ME6-A nrPDB 133 1e-31 3HXI-A nrPDB 130 8e-31 2JGB-A nrPDB 128 2e-30 5WB5-A nrPDB 89 2e-18 4B6U-A nrPDB 82 2e-16 6O80-A nrPDB 35 0.031 1PC3-A nrPDB 29 1.9 1NJ2-A nrPDB 29 2.2 1P0H-A nrPDB 28 3.2 >4AXG-A nrPDB Length = 248 Score = 503 bits (1294), Expect = e-143, Method: Compositional matrix adjust. Identities = 241/241 (100%), Positives = 241/241 (100%) Query: 19 KTSAPSTEQGRPEPPTSAAAPAEAKDVKPKEDPQETGEPAGNTATTTAPAGDDAVRTEHL 78 KTSAPSTEQGRPEPPTSAAAPAEAKDVKPKEDPQETGEPAGNTATTTAPAGDDAVRTEHL Sbjct: 8 KTSAPSTEQGRPEPPTSAAAPAEAKDVKPKEDPQETGEPAGNTATTTAPAGDDAVRTEHL 67 Query: 79 YKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLF 138 YKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLF Sbjct: 68 YKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLF 127 Query: 139 KKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINI 198 KKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINI Sbjct: 128 KKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINI 187 Query: 199 RGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIYT 258 RGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIYT Sbjct: 188 RGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIYT 247 Query: 259 L 259 L Sbjct: 248 L 248 >4UEC-A nrPDB Length = 184 Score = 377 bits (967), Expect = e-105, Method: Compositional matrix adjust. Identities = 180/180 (100%), Positives = 180/180 (100%) Query: 80 KHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLFK 139 KHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLFK Sbjct: 5 KHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLFK 64 Query: 140 KNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINIR 199 KNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINIR Sbjct: 65 KNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINIR 124 Query: 200 GKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIYTL 259 GKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIYTL Sbjct: 125 GKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIYTL 184 >5GW6-A nrPDB Length = 196 Score = 210 bits (535), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 99/186 (53%), Positives = 127/186 (68%), Gaps = 2/186 (1%) Query: 76 EHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDY 135 EH KHPL N W LW+ +ND+SK+W+ I+ FDTVEDFW+LYNHI+ S + G DY Sbjct: 11 EHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDY 70 Query: 136 SLFKKNIRPMWEDAANKQGGRWVITLNKSS-KTDLDNLWLDVLLCLIGEAF-DHSDQICG 193 SLFK I PMWEDAAN +GGRW+ITLNK ++DLD WL+ LLCLIGE+F D+SD +CG Sbjct: 71 SLFKDGIEPMWEDAANARGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCG 130 Query: 194 AVINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNV 253 AV+N+R K +KI+IWT + N EA IG ++ L L + YQ H DT K GS Sbjct: 131 AVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTT 190 Query: 254 KSIYTL 259 K+ + + Sbjct: 191 KNRFVV 196 >4DUM-A nrPDB Length = 240 Score = 208 bits (530), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 98/186 (52%), Positives = 126/186 (67%), Gaps = 2/186 (1%) Query: 76 EHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDY 135 EH KHPL N W LW+ +ND+SK+W+ I+ FDTVEDFW+LYNHI+ S + G DY Sbjct: 55 EHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDY 114 Query: 136 SLFKKNIRPMWEDAANKQGGRWVITLNKSS-KTDLDNLWLDVLLCLIGEAF-DHSDQICG 193 SLFK I PMWED NK+GGRW+ITLNK ++DLD WL+ LLCLIGE+F D+SD +CG Sbjct: 115 SLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCG 174 Query: 194 AVINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNV 253 AV+N+R K +KI+IWT + N EA IG ++ L L + YQ H DT K GS Sbjct: 175 AVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTT 234 Query: 254 KSIYTL 259 K+ + + Sbjct: 235 KNRFVV 240 >5ABX-A nrPDB Length = 190 Score = 189 bits (480), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 86/183 (46%), Positives = 121/183 (66%), Gaps = 5/183 (2%) Query: 77 HLYKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYS 136 H+ +HPL N W LWYL+ DR+K WED ++ FDTVEDFWSLYNHI+ + GSDY Sbjct: 3 HMTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWGSDYY 62 Query: 137 LFKKNIRPMWEDAANKQGGRWVITLNKSSKTD----LDNLWLDVLLCLIGEAFD-HSDQI 191 LFK+ I+PMWED N QGGRW++ ++K LD+ WL++L+ ++GE FD + D I Sbjct: 63 LFKEGIKPMWEDVNNVQGGRWLVVVDKQKLQRRTQLLDHYWLELLMAIVGEQFDEYGDYI 122 Query: 192 CGAVINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGS 251 CGAV+N+R K +K+S+WT D ++ L IG L+ L + L+Y++HKD+ + S Sbjct: 123 CGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSSARTSS 182 Query: 252 NVK 254 VK Sbjct: 183 TVK 185 >3M94-A nrPDB Length = 189 Score = 187 bits (476), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 86/177 (48%), Positives = 122/177 (68%), Gaps = 2/177 (1%) Query: 80 KHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLFK 139 +HPL W LWYL+ DRSK WED ++ FDTVEDFWSLYNHI+ S + GSDY LFK Sbjct: 2 RHPLQCHWALWYLKADRSKDWEDCLKQVAVFDTVEDFWSLYNHIQAASGLTWGSDYYLFK 61 Query: 140 KNIRPMWEDAANKQGGRWVITLNKSSKTD-LDNLWLDVLLCLIGEAF-DHSDQICGAVIN 197 + I+PMWED N +GGRW++ ++K + LD+ WL++L+ +IGE F D+ + ICGAV+N Sbjct: 62 EGIKPMWEDENNVKGGRWLVVVDKQKRAQLLDHYWLELLMAIIGEQFEDNGEYICGAVVN 121 Query: 198 IRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVK 254 +R K +K+S+WT D ++ L IG L+ L + ++Y++HKD+ V+ GS VK Sbjct: 122 VRQKGDKVSLWTRDSLKDDVNLRIGQILKAKLEIPDTEPIRYEVHKDSSVRTGSMVK 178 >6FC1-A nrPDB Length = 193 Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 73/166 (43%), Positives = 103/166 (62%), Gaps = 5/166 (3%) Query: 80 KHPLMNVWTLWYLEN--DRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSL 137 KHPL WTLWY + D+S+SW D+ +TSF TVE+FW++ +I P E+ L SDY + Sbjct: 16 KHPLNTAWTLWYTKPAVDKSESWSDLLRPVTSFQTVEEFWAIIQNIPEPHELPLKSDYHV 75 Query: 138 FKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSD-QICGAVI 196 F+ ++RP WED AN +GG+W L + + D+D LWL LL +IGE D D QI G V+ Sbjct: 76 FRNDVRPEWEDEANAKGGKWSFQL-RGAGADIDELWLRTLLAVIGETIDEDDSQINGVVL 134 Query: 197 NIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLH 242 +IR NK ++WTA ++E L IG K + L L + L++ H Sbjct: 135 SIRKGGNKFALWTA-SEDKEPLLRIGGKFKQVLALTDDGHLEFFPH 179 >2IDR-A nrPDB Length = 177 Score = 140 bits (354), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 68/168 (40%), Positives = 100/168 (59%), Gaps = 10/168 (5%) Query: 81 HPLMNVWTLWYLENDRSKS----WEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYS 136 HPL N WT W+ +N + KS W + I +F TVEDFW LYN+I PS++ +G+D+ Sbjct: 2 HPLENAWTFWF-DNPQGKSRQVAWGSTIHPIHTFSTVEDFWGLYNNIHNPSKLNVGADFH 60 Query: 137 LFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVI 196 FK I P WED GG+W I+ + D WL LL +IGE FD D+ICGAV+ Sbjct: 61 CFKNKIEPKWEDPICANGGKWTISCGRGKS---DTFWLHTLLAMIGEQFDFGDEICGAVV 117 Query: 197 NIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKD 244 ++R K +++IWT + NE A + IG + ++ L +S+ + +H+D Sbjct: 118 SVRQKQERVAIWTKNAANEAAQISIGKQWKEFLDY--KDSIGFIVHED 163 >2WMC-A nrPDB Length = 178 Score = 140 bits (353), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 71/182 (39%), Positives = 101/182 (55%), Gaps = 9/182 (4%) Query: 81 HPLMNVWTLWY---LENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSL 137 H L N WT W+ + +W I +F TVE+FWS+YN+I P ++ +G+D+ Sbjct: 3 HLLENSWTFWFDTPAAKSKQAAWGSSMRPIYTFSTVEEFWSIYNNIHHPGKLAVGADFYC 62 Query: 138 FKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVIN 197 FK I P WED GG+W K D WL LL +IGE FDH D+ICGAV+N Sbjct: 63 FKHKIEPKWEDPICANGGKWTANYPKGKS---DTSWLYTLLAMIGEQFDHGDEICGAVVN 119 Query: 198 IRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIY 257 +RG++ KISIWT + +NE A + IG + ++ L N ++ + H D K N K+ Y Sbjct: 120 VRGRAEKISIWTKNASNEAAQVSIGKQWKEFLDY--NETMGFIFHDDAR-KLDRNAKNKY 176 Query: 258 TL 259 + Sbjct: 177 VV 178 >6FBZ-A nrPDB Length = 200 Score = 134 bits (337), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 60/170 (35%), Positives = 101/170 (59%), Gaps = 5/170 (2%) Query: 80 KHPLMNVWTLWYLE--NDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSL 137 KHPL WTLW+ + + + +W D+ ++ +F++VE+FW +YN+I P SE+ + SDY L Sbjct: 16 KHPLSCRWTLWFTKPASGKGDNWNDLLKKVITFESVEEFWGIYNNIAPVSELAVKSDYHL 75 Query: 138 FKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSD--QICGAV 195 FK+ +RP WED NK GG+W ++D LWL +L IGE + + ++ G V Sbjct: 76 FKEGVRPEWEDPQNKHGGKWAYQFKDKRSVNIDELWLHTMLAAIGETLEDEEDGEVMGVV 135 Query: 196 INIRGKSNKISIWT-ADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKD 244 +N+R +I +WT ++E + IG +L++ L+L N +++ H + Sbjct: 136 VNVRKGFYRIGVWTRTTEKSKEILMNIGRRLKEVLKLPPNEMVEFSGHTE 185 >5ME5-A nrPDB Length = 237 Score = 133 bits (334), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 73/188 (38%), Positives = 103/188 (54%), Gaps = 16/188 (8%) Query: 68 AGDDAVRTEHLYK------HPLMNVWTLWYLENDRSKS----WEDMQNEITSFDTVEDFW 117 GDD + + +L HPL + WT W+ +N +KS W I +F TVE+FW Sbjct: 43 VGDDDLDSSNLSASLVHQPHPLEHSWTFWF-DNPSAKSKQATWGASIRPIYTFSTVEEFW 101 Query: 118 SLYNHIKPPSEIKLGSDYSLFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVL 177 S+YN+I PS++ + +D FK I P WED GG+W + + DN WL L Sbjct: 102 SVYNNIHHPSKLAMRADLYCFKHKIEPKWEDPVCANGGKWTVNFPRGKS---DNGWLYTL 158 Query: 178 LCLIGEAFDHSDQICGAVINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSL 237 L +IGE FD D+ICGAV+N+R +KISIWT + +NE A IG + ++ L N S+ Sbjct: 159 LAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDY--NESI 216 Query: 238 QYQLHKDT 245 + H D Sbjct: 217 GFIFHDDA 224 >5ME6-A nrPDB Length = 186 Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 69/169 (40%), Positives = 96/169 (56%), Gaps = 10/169 (5%) Query: 81 HPLMNVWTLWYLENDRSKS----WEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYS 136 HPL + WT W+ +N +KS W I +F TVE+FWS+YN+I PS++ + +D Sbjct: 11 HPLEHSWTFWF-DNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLAMRADLY 69 Query: 137 LFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVI 196 FK I P WED GG+W + + DN WL LL +IGE FD D+ICGAV+ Sbjct: 70 CFKHKIEPKWEDPVCANGGKWTVNFPRGKS---DNGWLYTLLAMIGEQFDCGDEICGAVV 126 Query: 197 NIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDT 245 N+R +KISIWT + +NE A IG + ++ L N S+ + H D Sbjct: 127 NVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDY--NESIGFIFHDDA 173 >3HXI-A nrPDB Length = 189 Score = 130 bits (326), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 59/156 (37%), Positives = 94/156 (60%), Gaps = 5/156 (3%) Query: 79 YKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLF 138 + HPL + W+ + + ++ W++ ++ +F T+EDFWS+ H P EI G D +F Sbjct: 8 FPHPLQDSWSYYLFQFRKALDWDECLEKVATFSTIEDFWSVLTHTVRPREITYGKDLYMF 67 Query: 139 KKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSD---QICGAV 195 K +I P WED N+ GGRW+I N +++ D+D LW ++L+ LIG +D + QICGAV Sbjct: 68 KSDIMPKWEDPKNENGGRWLI--NVTARQDVDFLWDELLMLLIGSDWDTDEEDRQICGAV 125 Query: 196 INIRGKSNKISIWTADGNNEEAALEIGHKLRDALRL 231 R + +K+S+W N EE L IG ++++ L L Sbjct: 126 FQPRSRGSKLSVWLTSDNEEETILSIGRRIKERLEL 161 >2JGB-A nrPDB Length = 195 Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 63/176 (35%), Positives = 100/176 (56%), Gaps = 8/176 (4%) Query: 80 KHPLMNVWTLWYLEND-----RSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSD 134 +HPL +T WY S+S+E +I +F +VE FW Y+H+ P ++ SD Sbjct: 14 EHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSD 73 Query: 135 YSLFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGA 194 + LFK+ I+PMWED ANK GG+W+I L K + W +++L ++GE F ++ICGA Sbjct: 74 FHLFKEGIKPMWEDDANKNGGKWIIRLRKGLAS---RCWENLILAMLGEQFMVGEEICGA 130 Query: 195 VINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQG 250 V+++R + + ISIW +++ I LR L L N ++Y+ H D++ G Sbjct: 131 VVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEYKTHTDSIKMPG 186 >5WB5-A nrPDB Length = 219 Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 56/219 (25%), Positives = 100/219 (45%), Gaps = 35/219 (15%) Query: 59 GNTATTTAPAGDDAVRTEHLYKHPLMNVWTLWY--LENDRSKSWEDMQNEITSFDTVEDF 116 G + +AP+ + +L H L WTLWY +++WE I + +VE+F Sbjct: 1 GAMGSMSAPSSVPPHKMANL--HKLQRAWTLWYDSPSTYNTENWEMSLVPIMTVHSVEEF 58 Query: 117 WSLYNHIKPPSEIKLGSDYSLFKKNIRPMWEDAANKQGGRWVITLNKSS----------- 165 + + ++KP ++ S Y F++ ++PMWED ANK+GG+ + L+ +S Sbjct: 59 FVMLRYMKPLHALRTSSQYHFFQEGVKPMWEDPANKKGGKLWVNLDITSANGRSSNNNTS 118 Query: 166 ------------KTDLDNLWLDVLLCLIGEAFDHSDQ--------ICGAVINIRGKSNKI 205 KTDLD W +VL+ +GE D D+ + G V++ R N++ Sbjct: 119 GTSAADGSAAEAKTDLDKAWENVLMATVGEYLDCVDKKDTPTEPFVTGIVMSKRKYHNRL 178 Query: 206 SIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKD 244 ++W +D + + + L L S+ + H + Sbjct: 179 AVWVSDASATDKIEALKKALTKEASLAPIASMVFTKHGE 217 >4B6U-A nrPDB Length = 207 Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 15/182 (8%) Query: 82 PLMNVWTLWY---LENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLF 138 PL + WT W L + +I + TV+ FWS+YN+I P + + L Y L Sbjct: 31 PLHSPWTFWLDRSLPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLM 90 Query: 139 KKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHS----DQICGA 194 + RP+WE+ +N +GG W + + K S + +W ++LL IGE F D+I G Sbjct: 91 RGERRPLWEEESNAKGGVWKMKVPKDSTS---TVWKELLLATIGEQFTDCAAADDEIIGV 147 Query: 195 VINIRGKSNKISIWTADGN--NEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSN 252 +++R + + + +W + + E LE H+L + ++ Y+ H++ +G Sbjct: 148 SVSVRDREDVVQVWNVNASLVGEATVLEKIHQLLPHIAF---KAVFYKPHEEHHAFEGGR 204 Query: 253 VK 254 K Sbjct: 205 GK 206 >6O80-A nrPDB Length = 222 Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust. Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 28/154 (18%) Query: 81 HPLMNVWTLWYL------------ENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSE 128 H L + W L Y+ + D +K+ + +Q + TVE+FWS N + + Sbjct: 28 HALKDPWFLSYIPQLTPDTVKYDFKGDWNKAKQALQQPLDYIRTVEEFWSTINSLPKLHQ 87 Query: 129 IKLGSDYSLFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDH- 187 + GS + + N+ +E N G R ++ L K+S + + VL ++GE + Sbjct: 88 LGNGSTFIFARNNVDASYEAFPN--GTRVLVDLYKASVAEKGMDF--VLSSVLGEGLTYD 143 Query: 188 ---SDQICGAVINIRGKSN-------KISIWTAD 211 ++C V+ + + N ++ +W +D Sbjct: 144 VFNGKKVCD-VVRLSSRPNQESPELVRLEVWLSD 176 >1PC3-A nrPDB Length = 350 Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 19/42 (45%) Query: 46 KPKEDPQETGEPAGNTATTTAPAGDDAVRTEHLYKHPLMNVW 87 KP ETG AG ATT A + T +PL N+W Sbjct: 3 KPPSGSPETGAGAGTVATTPASSPVTLAETGSTLLYPLFNLW 44 >1NJ2-A nrPDB Length = 501 Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust. Identities = 11/24 (45%), Positives = 19/24 (79%) Query: 92 LENDRSKSWEDMQNEITSFDTVED 115 LEN R+++WE M++EI +T+E+ Sbjct: 416 LENLRTRAWERMESEIREAETLEE 439 >1P0H-A nrPDB Length = 318 Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 4/69 (5%) Query: 46 KPKEDPQETGEPAGNTATTTAPAGDDA----VRTEHLYKHPLMNVWTLWYLENDRSKSWE 101 +P D E P G T A DDA V HP WT L R ++W Sbjct: 141 RPLRDIPEPTIPDGVVIRTYAGTSDDAELLRVNNAAFAGHPEQGGWTAVQLAERRGEAWF 200 Query: 102 DMQNEITSF 110 D I +F Sbjct: 201 DPDGLILAF 209 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4AXG-A nrPDB 380 e-106 4DUM-A nrPDB 271 2e-73 5GW6-A nrPDB 271 2e-73 4UEC-A nrPDB 271 2e-73 5ABX-A nrPDB 267 2e-72 3M94-A nrPDB 266 5e-72 5ME5-A nrPDB 263 5e-71 5ME6-A nrPDB 253 4e-68 2WMC-A nrPDB 251 3e-67 2IDR-A nrPDB 243 8e-65 2JGB-A nrPDB 238 2e-63 6FBZ-A nrPDB 233 8e-62 6FC1-A nrPDB 214 2e-56 5WB5-A nrPDB 210 4e-55 3HXI-A nrPDB 210 5e-55 4B6U-A nrPDB 198 2e-51 Sequences not found previously or not previously below threshold: 6O80-A nrPDB 60 1e-09 1P0H-A nrPDB 30 0.80 1RYX-A nrPDB 30 1.1 1PC3-A nrPDB 30 1.3 5YQS-A nrPDB 29 2.7 1UAR-A nrPDB 28 3.9 4O8A-A nrPDB 27 9.2 1TJ0-A nrPDB 27 9.2 >4AXG-A nrPDB Length = 248 Score = 380 bits (975), Expect = e-106, Method: Composition-based stats. Identities = 241/241 (100%), Positives = 241/241 (100%) Query: 19 KTSAPSTEQGRPEPPTSAAAPAEAKDVKPKEDPQETGEPAGNTATTTAPAGDDAVRTEHL 78 KTSAPSTEQGRPEPPTSAAAPAEAKDVKPKEDPQETGEPAGNTATTTAPAGDDAVRTEHL Sbjct: 8 KTSAPSTEQGRPEPPTSAAAPAEAKDVKPKEDPQETGEPAGNTATTTAPAGDDAVRTEHL 67 Query: 79 YKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLF 138 YKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLF Sbjct: 68 YKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLF 127 Query: 139 KKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINI 198 KKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINI Sbjct: 128 KKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINI 187 Query: 199 RGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIYT 258 RGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIYT Sbjct: 188 RGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIYT 247 Query: 259 L 259 L Sbjct: 248 L 248 >4DUM-A nrPDB Length = 240 Score = 271 bits (693), Expect = 2e-73, Method: Composition-based stats. Identities = 98/186 (52%), Positives = 126/186 (67%), Gaps = 2/186 (1%) Query: 76 EHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDY 135 EH KHPL N W LW+ +ND+SK+W+ I+ FDTVEDFW+LYNHI+ S + G DY Sbjct: 55 EHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDY 114 Query: 136 SLFKKNIRPMWEDAANKQGGRWVITLNK-SSKTDLDNLWLDVLLCLIGEAF-DHSDQICG 193 SLFK I PMWED NK+GGRW+ITLNK ++DLD WL+ LLCLIGE+F D+SD +CG Sbjct: 115 SLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCG 174 Query: 194 AVINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNV 253 AV+N+R K +KI+IWT + N EA IG ++ L L + YQ H DT K GS Sbjct: 175 AVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTT 234 Query: 254 KSIYTL 259 K+ + + Sbjct: 235 KNRFVV 240 >5GW6-A nrPDB Length = 196 Score = 271 bits (693), Expect = 2e-73, Method: Composition-based stats. Identities = 99/186 (53%), Positives = 127/186 (68%), Gaps = 2/186 (1%) Query: 76 EHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDY 135 EH KHPL N W LW+ +ND+SK+W+ I+ FDTVEDFW+LYNHI+ S + G DY Sbjct: 11 EHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDY 70 Query: 136 SLFKKNIRPMWEDAANKQGGRWVITLNK-SSKTDLDNLWLDVLLCLIGEAF-DHSDQICG 193 SLFK I PMWEDAAN +GGRW+ITLNK ++DLD WL+ LLCLIGE+F D+SD +CG Sbjct: 71 SLFKDGIEPMWEDAANARGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCG 130 Query: 194 AVINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNV 253 AV+N+R K +KI+IWT + N EA IG ++ L L + YQ H DT K GS Sbjct: 131 AVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTT 190 Query: 254 KSIYTL 259 K+ + + Sbjct: 191 KNRFVV 196 >4UEC-A nrPDB Length = 184 Score = 271 bits (692), Expect = 2e-73, Method: Composition-based stats. Identities = 180/180 (100%), Positives = 180/180 (100%) Query: 80 KHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLFK 139 KHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLFK Sbjct: 5 KHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLFK 64 Query: 140 KNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINIR 199 KNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINIR Sbjct: 65 KNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINIR 124 Query: 200 GKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIYTL 259 GKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIYTL Sbjct: 125 GKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIYTL 184 >5ABX-A nrPDB Length = 190 Score = 267 bits (683), Expect = 2e-72, Method: Composition-based stats. Identities = 87/188 (46%), Positives = 122/188 (64%), Gaps = 5/188 (2%) Query: 77 HLYKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYS 136 H+ +HPL N W LWYL+ DR+K WED ++ FDTVEDFWSLYNHI+ + GSDY Sbjct: 3 HMTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWGSDYY 62 Query: 137 LFKKNIRPMWEDAANKQGGRWVITLNKSSKTD----LDNLWLDVLLCLIGEAFD-HSDQI 191 LFK+ I+PMWED N QGGRW++ ++K LD+ WL++L+ ++GE FD + D I Sbjct: 63 LFKEGIKPMWEDVNNVQGGRWLVVVDKQKLQRRTQLLDHYWLELLMAIVGEQFDEYGDYI 122 Query: 192 CGAVINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGS 251 CGAV+N+R K +K+S+WT D ++ L IG L+ L + L+Y++HKD+ + S Sbjct: 123 CGAVVNVRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSSARTSS 182 Query: 252 NVKSIYTL 259 VK L Sbjct: 183 TVKPRICL 190 >3M94-A nrPDB Length = 189 Score = 266 bits (681), Expect = 5e-72, Method: Composition-based stats. Identities = 86/182 (47%), Positives = 123/182 (67%), Gaps = 2/182 (1%) Query: 80 KHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLFK 139 +HPL W LWYL+ DRSK WED ++ FDTVEDFWSLYNHI+ S + GSDY LFK Sbjct: 2 RHPLQCHWALWYLKADRSKDWEDCLKQVAVFDTVEDFWSLYNHIQAASGLTWGSDYYLFK 61 Query: 140 KNIRPMWEDAANKQGGRWVITLNKSSKTD-LDNLWLDVLLCLIGEAF-DHSDQICGAVIN 197 + I+PMWED N +GGRW++ ++K + LD+ WL++L+ +IGE F D+ + ICGAV+N Sbjct: 62 EGIKPMWEDENNVKGGRWLVVVDKQKRAQLLDHYWLELLMAIIGEQFEDNGEYICGAVVN 121 Query: 198 IRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSIY 257 +R K +K+S+WT D ++ L IG L+ L + ++Y++HKD+ V+ GS VK Sbjct: 122 VRQKGDKVSLWTRDSLKDDVNLRIGQILKAKLEIPDTEPIRYEVHKDSSVRTGSMVKPRI 181 Query: 258 TL 259 + Sbjct: 182 VI 183 >5ME5-A nrPDB Length = 237 Score = 263 bits (672), Expect = 5e-71, Method: Composition-based stats. Identities = 72/201 (35%), Positives = 105/201 (52%), Gaps = 15/201 (7%) Query: 68 AGDDAVRTEHLY------KHPLMNVWTLWY---LENDRSKSWEDMQNEITSFDTVEDFWS 118 GDD + + +L HPL + WT W+ + +W I +F TVE+FWS Sbjct: 43 VGDDDLDSSNLSASLVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWS 102 Query: 119 LYNHIKPPSEIKLGSDYSLFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLL 178 +YN+I PS++ + +D FK I P WED GG+W + + DN WL LL Sbjct: 103 VYNNIHHPSKLAMRADLYCFKHKIEPKWEDPVCANGGKWTVNFPRGKS---DNGWLYTLL 159 Query: 179 CLIGEAFDHSDQICGAVINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQ 238 +IGE FD D+ICGAV+N+R +KISIWT + +NE A IG + ++ L N S+ Sbjct: 160 AMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDY--NESIG 217 Query: 239 YQLHKDTMVKQGSNVKSIYTL 259 + H D + K+ Y + Sbjct: 218 FIFHDDAKKF-DRHAKNKYMV 237 >5ME6-A nrPDB Length = 186 Score = 253 bits (647), Expect = 4e-68, Method: Composition-based stats. Identities = 68/183 (37%), Positives = 98/183 (53%), Gaps = 9/183 (4%) Query: 80 KHPLMNVWTLWY---LENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYS 136 HPL + WT W+ + +W I +F TVE+FWS+YN+I PS++ + +D Sbjct: 10 PHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLAMRADLY 69 Query: 137 LFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVI 196 FK I P WED GG+W + + DN WL LL +IGE FD D+ICGAV+ Sbjct: 70 CFKHKIEPKWEDPVCANGGKWTVNFPRGKS---DNGWLYTLLAMIGEQFDCGDEICGAVV 126 Query: 197 NIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSI 256 N+R +KISIWT + +NE A IG + ++ L N S+ + H D + K+ Sbjct: 127 NVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDY--NESIGFIFHDDAKKF-DRHAKNK 183 Query: 257 YTL 259 Y + Sbjct: 184 YMV 186 >2WMC-A nrPDB Length = 178 Score = 251 bits (640), Expect = 3e-67, Method: Composition-based stats. Identities = 71/183 (38%), Positives = 101/183 (55%), Gaps = 9/183 (4%) Query: 80 KHPLMNVWTLWY---LENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYS 136 H L N WT W+ + +W I +F TVE+FWS+YN+I P ++ +G+D+ Sbjct: 2 PHLLENSWTFWFDTPAAKSKQAAWGSSMRPIYTFSTVEEFWSIYNNIHHPGKLAVGADFY 61 Query: 137 LFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVI 196 FK I P WED GG+W K D WL LL +IGE FDH D+ICGAV+ Sbjct: 62 CFKHKIEPKWEDPICANGGKWTANYPKGKS---DTSWLYTLLAMIGEQFDHGDEICGAVV 118 Query: 197 NIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKSI 256 N+RG++ KISIWT + +NE A + IG + ++ L N ++ + H D K N K+ Sbjct: 119 NVRGRAEKISIWTKNASNEAAQVSIGKQWKEFLDY--NETMGFIFHDDAR-KLDRNAKNK 175 Query: 257 YTL 259 Y + Sbjct: 176 YVV 178 >2IDR-A nrPDB Length = 177 Score = 243 bits (619), Expect = 8e-65, Method: Composition-based stats. Identities = 71/184 (38%), Positives = 106/184 (57%), Gaps = 11/184 (5%) Query: 80 KHPLMNVWTLWYLENDRSKS----WEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDY 135 HPL N WT W+ +N + KS W + I +F TVEDFW LYN+I PS++ +G+D+ Sbjct: 1 AHPLENAWTFWF-DNPQGKSRQVAWGSTIHPIHTFSTVEDFWGLYNNIHNPSKLNVGADF 59 Query: 136 SLFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAV 195 FK I P WED GG+W I+ + D WL LL +IGE FD D+ICGAV Sbjct: 60 HCFKNKIEPKWEDPICANGGKWTISCGRGKS---DTFWLHTLLAMIGEQFDFGDEICGAV 116 Query: 196 INIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVKS 255 +++R K +++IWT + NE A + IG + ++ L +S+ + +H+D + K+ Sbjct: 117 VSVRQKQERVAIWTKNAANEAAQISIGKQWKEFLDY--KDSIGFIVHEDA-KRSDKGPKN 173 Query: 256 IYTL 259 YT+ Sbjct: 174 RYTV 177 >2JGB-A nrPDB Length = 195 Score = 238 bits (606), Expect = 2e-63, Method: Composition-based stats. Identities = 63/182 (34%), Positives = 100/182 (54%), Gaps = 8/182 (4%) Query: 80 KHPLMNVWTLWYLE-----NDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSD 134 +HPL +T WY S+S+E +I +F +VE FW Y+H+ P ++ SD Sbjct: 14 EHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSD 73 Query: 135 YSLFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGA 194 + LFK+ I+PMWED ANK GG+W+I L K + W +++L ++GE F ++ICGA Sbjct: 74 FHLFKEGIKPMWEDDANKNGGKWIIRLRKGLAS---RCWENLILAMLGEQFMVGEEICGA 130 Query: 195 VINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSNVK 254 V+++R + + ISIW +++ I LR L L N ++Y+ H D++ G Sbjct: 131 VVSVRFQEDIISIWNKTASDQATTARIRDTLRRVLNLPPNTIMEYKTHTDSIKMPGRLGP 190 Query: 255 SI 256 Sbjct: 191 QR 192 >6FBZ-A nrPDB Length = 200 Score = 233 bits (593), Expect = 8e-62, Method: Composition-based stats. Identities = 63/193 (32%), Positives = 106/193 (54%), Gaps = 6/193 (3%) Query: 73 VRTEHL-YKHPLMNVWTLWYLENDRSK--SWEDMQNEITSFDTVEDFWSLYNHIKPPSEI 129 E+ KHPL WTLW+ + K +W D+ ++ +F++VE+FW +YN+I P SE+ Sbjct: 8 HDKENFNVKHPLSCRWTLWFTKPASGKGDNWNDLLKKVITFESVEEFWGIYNNIAPVSEL 67 Query: 130 KLGSDYSLFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSD 189 + SDY LFK+ +RP WED NK GG+W ++D LWL +L IGE + + Sbjct: 68 AVKSDYHLFKEGVRPEWEDPQNKHGGKWAYQFKDKRSVNIDELWLHTMLAAIGETLEDEE 127 Query: 190 --QICGAVINIRGKSNKISIWT-ADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTM 246 ++ G V+N+R +I +WT ++E + IG +L++ L+L N +++ H + Sbjct: 128 DGEVMGVVVNVRKGFYRIGVWTRTTEKSKEILMNIGRRLKEVLKLPPNEMVEFSGHTEAA 187 Query: 247 VKQGSNVKSIYTL 259 + K+ + Sbjct: 188 QAGSTRAKARMVV 200 >6FC1-A nrPDB Length = 193 Score = 214 bits (546), Expect = 2e-56, Method: Composition-based stats. Identities = 74/179 (41%), Positives = 106/179 (59%), Gaps = 6/179 (3%) Query: 74 RTEHL-YKHPLMNVWTLWYLEN--DRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIK 130 + H KHPL WTLWY + D+S+SW D+ +TSF TVE+FW++ +I P E+ Sbjct: 9 DSAHFDVKHPLNTAWTLWYTKPAVDKSESWSDLLRPVTSFQTVEEFWAIIQNIPEPHELP 68 Query: 131 LGSDYSLFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSD- 189 L SDY +F+ ++RP WED AN +GG+W L + + D+D LWL LL +IGE D D Sbjct: 69 LKSDYHVFRNDVRPEWEDEANAKGGKWSFQL-RGAGADIDELWLRTLLAVIGETIDEDDS 127 Query: 190 QICGAVINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVK 248 QI G V++IR NK ++WTA ++E L IG K + L L + L++ H + Sbjct: 128 QINGVVLSIRKGGNKFALWTA-SEDKEPLLRIGGKFKQVLALTDDGHLEFFPHSSANGR 185 >5WB5-A nrPDB Length = 219 Score = 210 bits (535), Expect = 4e-55, Method: Composition-based stats. Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 35/221 (15%) Query: 59 GNTATTTAPAGDDAVRTEHLYKHPLMNVWTLWY--LENDRSKSWEDMQNEITSFDTVEDF 116 G + +AP+ + +L H L WTLWY +++WE I + +VE+F Sbjct: 1 GAMGSMSAPSSVPPHKMANL--HKLQRAWTLWYDSPSTYNTENWEMSLVPIMTVHSVEEF 58 Query: 117 WSLYNHIKPPSEIKLGSDYSLFKKNIRPMWEDAANKQGGRWVITLNKSS----------- 165 + + ++KP ++ S Y F++ ++PMWED ANK+GG+ + L+ +S Sbjct: 59 FVMLRYMKPLHALRTSSQYHFFQEGVKPMWEDPANKKGGKLWVNLDITSANGRSSNNNTS 118 Query: 166 ------------KTDLDNLWLDVLLCLIGEAFDHSDQ--------ICGAVINIRGKSNKI 205 KTDLD W +VL+ +GE D D+ + G V++ R N++ Sbjct: 119 GTSAADGSAAEAKTDLDKAWENVLMATVGEYLDCVDKKDTPTEPFVTGIVMSKRKYHNRL 178 Query: 206 SIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTM 246 ++W +D + + + L L S+ + H + Sbjct: 179 AVWVSDASATDKIEALKKALTKEASLAPIASMVFTKHGEAS 219 >3HXI-A nrPDB Length = 189 Score = 210 bits (534), Expect = 5e-55, Method: Composition-based stats. Identities = 59/177 (33%), Positives = 100/177 (56%), Gaps = 7/177 (3%) Query: 79 YKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLF 138 + HPL + W+ + + ++ W++ ++ +F T+EDFWS+ H P EI G D +F Sbjct: 8 FPHPLQDSWSYYLFQFRKALDWDECLEKVATFSTIEDFWSVLTHTVRPREITYGKDLYMF 67 Query: 139 KKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQ---ICGAV 195 K +I P WED N+ GGRW+I + +++ D+D LW ++L+ LIG +D ++ ICGAV Sbjct: 68 KSDIMPKWEDPKNENGGRWLINV--TARQDVDFLWDELLMLLIGSDWDTDEEDRQICGAV 125 Query: 196 INIRGKSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSN 252 R + +K+S+W N EE L IG ++++ L L + +Q D + + Sbjct: 126 FQPRSRGSKLSVWLTSDNEEETILSIGRRIKERLELEDT--IYFQPVSDQRSQTRGS 180 >4B6U-A nrPDB Length = 207 Score = 198 bits (504), Expect = 2e-51, Method: Composition-based stats. Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 15/183 (8%) Query: 82 PLMNVWTLWY---LENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLF 138 PL + WT W L + +I + TV+ FWS+YN+I P + + L Y L Sbjct: 31 PLHSPWTFWLDRSLPGATAAECASNLKKIYTVQTVQIFWSVYNNIPPVTSLPLRCSYHLM 90 Query: 139 KKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHS----DQICGA 194 + RP+WE+ +N +GG W + + K S + +W ++LL IGE F D+I G Sbjct: 91 RGERRPLWEEESNAKGGVWKMKVPKDSTS---TVWKELLLATIGEQFTDCAAADDEIIGV 147 Query: 195 VINIRGKSNKISIWTADGN--NEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQGSN 252 +++R + + + +W + + E LE H+L + ++ Y+ H++ +G Sbjct: 148 SVSVRDREDVVQVWNVNASLVGEATVLEKIHQLLPHIAF---KAVFYKPHEEHHAFEGGR 204 Query: 253 VKS 255 K Sbjct: 205 GKH 207 >6O80-A nrPDB Length = 222 Score = 59.7 bits (143), Expect = 1e-09, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 77/201 (38%), Gaps = 28/201 (13%) Query: 79 YKHPLMNVWTLWY------------LENDRSKSWEDMQNEITSFDTVEDFWSLYNHIKPP 126 H L + W L Y + D +K+ + +Q + TVE+FWS N + Sbjct: 26 TAHALKDPWFLSYIPQLTPDTVKYDFKGDWNKAKQALQQPLDYIRTVEEFWSTINSLPKL 85 Query: 127 SEIKLGSDYSLFKKNIRPMWEDAANKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFD 186 ++ GS + + N+ +E A G R ++ L K+S + VL ++GE Sbjct: 86 HQLGNGSTFIFARNNVDASYE--AFPNGTRVLVDLYKASVA--EKGMDFVLSSVLGEGLT 141 Query: 187 H----SDQICGAV-INIRGKSN-----KISIWTADGN-NEEAALEIGHKLRDA-LRLGRN 234 + ++C V ++ R ++ +W +D ++ I L +A L Sbjct: 142 YDVFNGKKVCDVVRLSSRPNQESPELVRLEVWLSDQLYAKDVIPYIRKGLNEAGLSFTDF 201 Query: 235 NSLQYQLHKDTMVKQGSNVKS 255 + KD S KS Sbjct: 202 IMGESTFEKDKKKPSVSGAKS 222 >1P0H-A nrPDB Length = 318 Score = 30.5 bits (67), Expect = 0.80, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 4/69 (5%) Query: 46 KPKEDPQETGEPAGNTATTTAPAGDDA----VRTEHLYKHPLMNVWTLWYLENDRSKSWE 101 +P D E P G T A DDA V HP WT L R ++W Sbjct: 141 RPLRDIPEPTIPDGVVIRTYAGTSDDAELLRVNNAAFAGHPEQGGWTAVQLAERRGEAWF 200 Query: 102 DMQNEITSF 110 D I +F Sbjct: 201 DPDGLILAF 209 >1RYX-A nrPDB Length = 686 Score = 30.1 bits (66), Expect = 1.1, Method: Composition-based stats. Identities = 9/26 (34%), Positives = 13/26 (50%) Query: 113 VEDFWSLYNHIKPPSEIKLGSDYSLF 138 VED WS + + + SD+ LF Sbjct: 260 VEDIWSFLSKAQSDFGVDTKSDFHLF 285 >1PC3-A nrPDB Length = 350 Score = 29.7 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 19/42 (45%) Query: 46 KPKEDPQETGEPAGNTATTTAPAGDDAVRTEHLYKHPLMNVW 87 KP ETG AG ATT A + T +PL N+W Sbjct: 3 KPPSGSPETGAGAGTVATTPASSPVTLAETGSTLLYPLFNLW 44 >5YQS-A nrPDB Length = 765 Score = 28.5 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 20/53 (37%), Gaps = 7/53 (13%) Query: 117 WSLYNHIKPPSEIKLGSDYSLFKKNIRPMWEDAANKQGGRWVITLNKSSKTDL 169 WS+ + I +DY + +R W G ++ +T + + + Sbjct: 240 WSIMSAYHSYDGIPAVADYHTLTEILREEW-------GYKYWVTSDAGASDRV 285 >1UAR-A nrPDB Length = 285 Score = 28.2 bits (61), Expect = 3.9, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 13/107 (12%) Query: 26 EQGRP-------EPPTSAAAPAEAKDVKPKEDPQ-----ETGEPAGNTATTTAPAGDDAV 73 E+GRP PP P + ++ D + E G +P Sbjct: 120 EEGRPLTTEVPSYPPGRYEVPYRDESIRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRG- 178 Query: 74 RTEHLYKHPLMNVWTLWYLENDRSKSWEDMQNEITSFDTVEDFWSLY 120 H+ +P ++ ++ W N +F + E+ +LY Sbjct: 179 ELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALY 225 >4O8A-A nrPDB Length = 687 Score = 27.0 bits (58), Expect = 9.2, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 13/27 (48%) Query: 178 LCLIGEAFDHSDQICGAVINIRGKSNK 204 + L+GE F + I A+ N R K Sbjct: 252 MRLMGEQFVTGETIAEALANARKLEEK 278 >1TJ0-A nrPDB Length = 602 Score = 27.0 bits (58), Expect = 9.2, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 13/27 (48%) Query: 178 LCLIGEAFDHSDQICGAVINIRGKSNK 204 + L+GE F + I A+ N R K Sbjct: 167 MRLMGEQFVTGETIAEALANARKLEEK 193 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.129 0.388 Lambda K H 0.267 0.0398 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,068,973 Number of Sequences: 36641 Number of extensions: 457819 Number of successful extensions: 1003 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 47 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 879 Number of HSP's gapped (non-prelim): 69 length of query: 259 length of database: 10,336,785 effective HSP length: 95 effective length of query: 164 effective length of database: 6,855,890 effective search space: 1124365960 effective search space used: 1124365960 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 58 (27.0 bits)