BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P48449 (732 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1W6K-A nrPDB 1528 0.0 1UMP-A nrPDB 162 4e-40 3IS5-A nrPDB 33 0.50 2VPO-A nrPDB 32 1.2 3D12-A nrPDB 31 1.9 4K0R-A nrPDB 31 1.9 6GN6-A nrPDB 30 3.2 1SQG-A nrPDB 30 3.3 6CMI-B nrPDB 29 6.4 3S9V-A nrPDB 29 7.3 5LK4-A nrPDB 29 7.9 3HXF-B nrPDB 29 9.4 >1W6K-A nrPDB Length = 732 Score = 1528 bits (3956), Expect = 0.0, Method: Compositional matrix adjust. Identities = 731/732 (99%), Positives = 732/732 (100%) Query: 1 MTEGTCLRRRGGPYKTEPATDLGRWRLNCERGRQTWTYLQDERAGREQTGLEAYALGLDT 60 MTEGTCLRRRGGPYKTEPATDLGRWRLNCERGRQTWTYLQDERAGREQTGLEAYALGLDT Sbjct: 1 MTEGTCLRRRGGPYKTEPATDLGRWRLNCERGRQTWTYLQDERAGREQTGLEAYALGLDT 60 Query: 61 KNYFKDLPKAHTAFEGALNGMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLP 120 KNYFKDLPKAHTAFEGALNGMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLP Sbjct: 61 KNYFKDLPKAHTAFEGALNGMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLP 120 Query: 121 AGYREEIVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNIL 180 AGYREEIVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNIL Sbjct: 121 AGYREEIVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNIL 180 Query: 181 HKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPM 240 HKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPM Sbjct: 181 HKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPM 240 Query: 241 SYCYAVRLSAAEDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALL 300 SYCYAVRLSAAEDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALL Sbjct: 241 SYCYAVRLSAAEDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALL 300 Query: 301 NLYEHHHSAHLRQRAVQKLYEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQE 360 NLYEHHHSAHLRQRAVQKLYEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQE Sbjct: 301 NLYEHHHSAHLRQRAVQKLYEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQE 360 Query: 361 HVSRIPDYLWMGLDGMKMQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRL 420 HVSRIPDYLWMGLDGMKMQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRL Sbjct: 361 HVSRIPDYLWMGLDGMKMQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRL 420 Query: 421 SQVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPR 480 SQVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPR Sbjct: 421 SQVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPR 480 Query: 481 ERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQA 540 ERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQA Sbjct: 481 ERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQA 540 Query: 541 LKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMG 600 LKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMG Sbjct: 541 LKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMG 600 Query: 601 QTYRDGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRYLQSAQSQIHNTCWAMMGLM 660 QTYRDGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRY+QSAQSQIHNTCWAMMGLM Sbjct: 601 QTYRDGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRYVQSAQSQIHNTCWAMMGLM 660 Query: 661 AVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRFS 720 AVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRFS Sbjct: 661 AVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRFS 720 Query: 721 QLYPERALAGHP 732 QLYPERALAGHP Sbjct: 721 QLYPERALAGHP 732 >1UMP-A nrPDB Length = 631 Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 165/658 (25%), Positives = 280/658 (42%), Gaps = 57/658 (8%) Query: 81 MTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLPAGYREEIVRYLRSVQLPDGG 140 + + + Q ++G+W G + + ++ CH+ + E+I RYL Q DG Sbjct: 19 VEYLLSCQKDEGYWWGPLLSNVTMEAEYVLLCHILDR-VDRDRMEKIRRYLLHEQREDGT 77 Query: 141 WGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNILHKKGGAVAIPSWGKFWLAVL 200 W L+ + T YV+L+ +G+ D+ + +A + +GG + + + WLA++ Sbjct: 78 WALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLALV 137 Query: 201 NVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPMSYCYAVRLSAAEDPLVQSLR 260 Y WE + + PE+ P + R + +S + + PL + R Sbjct: 138 GEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVF---PLPERAR 194 Query: 261 -QELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALLNLYEHHHSAHLRQRAVQKL 319 ELY D A+ W+ + L+ Y+ R+ A + Sbjct: 195 VPELYETDVPPRRRGAKGGG----------GWIFDALDRALHGYQKLSVHPFRRAAEIRA 244 Query: 320 YEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQEHVSRIPDYL--WMGLD--- 374 + ++ +R S G I W+ A +++ P ++ W GL+ Sbjct: 245 LDWLL--ERQAGDGSWGGIQPP------WFYALIALKILD--MTQHPAFIKGWEGLELYG 294 Query: 375 -----GMKMQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRLSQVPDNPPD 429 G M + S +WDT A+ AL AG P L KA E+L Q+ P D Sbjct: 295 VELDYGGWMFQASISPVWDTGLAVLALRAAG---LPADHDRLVKAGEWLLDRQI-TVPGD 350 Query: 430 YQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPRERLCDAVAV 489 + ++ GGF+F + + D TA + A+ L + P E R+ + Sbjct: 351 WAVKRPNLKPGGFAFQFDNVYYPDVDDTAVVVWALNTL--RLPD--ERRRRDAMTKGFRW 406 Query: 490 LLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQALKYFHKRFP 549 ++ M++ +GG+ Y+ L + P FG++ D + T+ V++ F Sbjct: 407 IVGMQSSNGGWGAYDVDNTSDLPNHI-PFCDFGEV-TDPPSEDVTAHVLECFGSFGYD-- 462 Query: 550 EHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMGQTYRDGTAC 609 + + + + +E+ +R+Q+ DGSW G WGV + YGT + A +G R+ Sbjct: 463 -----DAWKVIRRAVEYLKREQKPDGSWFGRWGVNYLYGTGAVVSALKAVGIDTRE---- 513 Query: 610 AEVSRACDFLLSRQMADGGWGEDFESCEERRYLQSAQSQIHNTCWAMMGLMAVRHPDIEA 669 + +A D++ Q DGGWGED S E+ Y S T WA+M L+A + EA Sbjct: 514 PYIQKALDWVEQHQNPDGGWGEDCRSYEDPAYAGKGASTPSQTAWALMALIAGGRAESEA 573 Query: 670 QERGVRCLLEKQLPNGDWPQENIAGV-FNKSCAISYTSYRNIFPIWALGRFSQLYPER 726 RGV+ L+E Q P+G W + G F + YT YR++FP ALGR+ Q R Sbjct: 574 ARRGVQYLVETQRPDGGWDEPYYTGTGFPGDFYLGYTMYRHVFPTLALGRYKQAIERR 631 >3IS5-A nrPDB Length = 285 Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust. Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 12/98 (12%) Query: 477 HIPRERLCDAVAVLLNMRNPD------------GGFATYETKRGGHLLELLNPSEVFGDI 524 +P E++ + VL ++ +P+ + ET GG LLE + ++ G Sbjct: 61 QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKA 120 Query: 525 MIDYTYVECTSAVMQALKYFHKRFPEHRAAEIRETLTQ 562 + + E +M AL YFH + H+ + L Q Sbjct: 121 LSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQ 158 >2VPO-A nrPDB Length = 316 Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 8/111 (7%) Query: 280 VAPDELYTPHSWLLRVVYALLNLYE--HHHSAHLRQRAVQKLYEHIVADDRFTKSISIGP 337 V+P+ +T H W + A + YE L Q A Y+H + + S+ Sbjct: 197 VSPNLTFTSHGWFTTAMMANQDFYEGLSEEDQQLVQDAADAAYDHTIEHIKGLSEESLEK 256 Query: 338 ISKTINMLVRWYVDGPASTAFQEHVSRIPDYLWMGLDGMKMQGTNGSQIWD 388 I + + ++ AF+E ++ + ++M G G ++ D Sbjct: 257 IKAASDEVTVTRLNDEQIQAFKERAPQVEEKF------IEMTGEQGQELLD 301 >3D12-A nrPDB Length = 428 Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust. Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Query: 213 PEMWLFPDWAPAHPSTLWCHCRQVYLPMSYCYAVRLSAAEDPLVQS 258 P +++ W P +P+T++ HC VY Y +S DP++ S Sbjct: 88 PSLFMTNVWTPPNPNTVY-HCSAVYNNEFYYVLCAVSTVGDPILNS 132 >4K0R-A nrPDB Length = 617 Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust. Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 9/132 (6%) Query: 193 GKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPMSYCYA-VRLSAA 251 G W+ SWE +F E+ L DW+ S +W C + +CY V Sbjct: 368 GDLWI------SWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRR 421 Query: 252 EDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALLNLYEHHHSAHL 311 DP +R+ L V ++ N AP+ + L+ V Y + H ++ L Sbjct: 422 TDPNGDYIRRYLPVLRGFPAKYIYDPWN-APEGIQKVAKCLIGVNYP-KPMVNHAEASRL 479 Query: 312 RQRAVQKLYEHI 323 ++++Y+ + Sbjct: 480 NIERMKQIYQQL 491 >6GN6-A nrPDB Length = 447 Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust. Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 10/82 (12%) Query: 403 HRPEFSSCLQKAHEFLRLSQVPDNPPDYQKY----YRQMRKGGFSFSTLDCGWI---VSD 455 H P++ + + H ++ D P D+ +Y + Q+++ ++ T+D W D Sbjct: 153 HHPDYPAYGDRQHPMRDNAEFKDRPQDFNRYLDYMHGQVKELLTNYGTIDVLWFDFSYED 212 Query: 456 CTAEALKA---VLLLQEKCPHV 474 T E KA V +++E P+V Sbjct: 213 MTGEKWKATELVKMIRELQPNV 234 >1SQG-A nrPDB Length = 429 Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 13/69 (18%) Query: 658 GLMAVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALG 717 G +A++ P ++ GV ++Q QE + FN S A R + P W L Sbjct: 105 GAIAIKRPQLKGLINGVLRQFQRQ-------QEELLAEFNASDA------RYLHPSWLLK 151 Query: 718 RFSQLYPER 726 R + YPE+ Sbjct: 152 RLQKAYPEQ 160 >6CMI-B nrPDB Length = 428 Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust. Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 213 PEMWLFPDWAPAHPSTLWCHCRQVYLPMSYCYAVRLSAAEDPLVQS 258 P M++ W P +PST+ HC Y Y +S DP++ S Sbjct: 88 PSMFMTNVWTPPNPSTIH-HCSSTYHEDFYYTLCAVSHVGDPILNS 132 >3S9V-A nrPDB Length = 785 Score = 29.3 bits (64), Expect = 7.3, Method: Compositional matrix adjust. Identities = 15/50 (30%), Positives = 21/50 (42%) Query: 605 DGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRYLQSAQSQIHNTCW 654 DG+ +++L Q+ DG WGE F R L + I T W Sbjct: 69 DGSDNPHFPETVEWILQNQLKDGSWGEGFYFLAYDRILATLACIITLTLW 118 >5LK4-A nrPDB Length = 219 Score = 28.9 bits (63), Expect = 7.9, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 11/81 (13%) Query: 97 DYGGPLFLLPGLLITCHVARIP------LPAGYREEIVRYLRSVQLPDGGWGLHIEDKST 150 D P F+ T H A IP P G++ E R + DGG +D S Sbjct: 54 DILSPQFMYGSRAFTKHPADIPDYYKQSFPEGFKWE-----RVMNFEDGGAVTVTQDTSL 108 Query: 151 VFGTALNYVSLRILGVGPDDP 171 GT + V LR PD P Sbjct: 109 EDGTLIYKVKLRGTNFPPDGP 129 >3HXF-B nrPDB Length = 331 Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust. Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 6/68 (8%) Query: 564 LEFCRRQQRADGSWEGS-WGVCFTYGTWFGLEAFACMGQTYRDGTACAEVSRACDFLLSR 622 + + + Q+ DGS+ G WG T ++ + A +G+ V +A +F+LS Sbjct: 120 VAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKL-----DAINVEKAIEFVLSC 174 Query: 623 QMADGGWG 630 DGG+G Sbjct: 175 MNFDGGFG 182 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1W6K-A nrPDB 1337 0.0 1UMP-A nrPDB 871 0.0 Sequences not found previously or not previously below threshold: 3S9V-A nrPDB 37 0.029 5JPN-B nrPDB 34 0.23 4XAM-C nrPDB 34 0.25 3SDU-A nrPDB 34 0.26 4PW2-A nrPDB 34 0.33 3P5P-A nrPDB 33 0.40 3HXF-B nrPDB 33 0.42 5LK4-A nrPDB 33 0.49 1HZF-A nrPDB 33 0.52 3F8T-A nrPDB 32 0.96 2ZIR-B nrPDB 32 1.3 6I01-A nrPDB 32 1.4 4DCH-A nrPDB 30 3.2 2V4E-A nrPDB 30 3.8 6NTW-A nrPDB 30 4.2 3ZXJ-A nrPDB 29 6.1 4V7O-A6 nrPDB 29 7.9 3PGB-A nrPDB 29 8.9 CONVERGED! >1W6K-A nrPDB Length = 732 Score = 1337 bits (3460), Expect = 0.0, Method: Composition-based stats. Identities = 731/732 (99%), Positives = 732/732 (100%) Query: 1 MTEGTCLRRRGGPYKTEPATDLGRWRLNCERGRQTWTYLQDERAGREQTGLEAYALGLDT 60 MTEGTCLRRRGGPYKTEPATDLGRWRLNCERGRQTWTYLQDERAGREQTGLEAYALGLDT Sbjct: 1 MTEGTCLRRRGGPYKTEPATDLGRWRLNCERGRQTWTYLQDERAGREQTGLEAYALGLDT 60 Query: 61 KNYFKDLPKAHTAFEGALNGMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLP 120 KNYFKDLPKAHTAFEGALNGMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLP Sbjct: 61 KNYFKDLPKAHTAFEGALNGMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLP 120 Query: 121 AGYREEIVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNIL 180 AGYREEIVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNIL Sbjct: 121 AGYREEIVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNIL 180 Query: 181 HKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPM 240 HKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPM Sbjct: 181 HKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPM 240 Query: 241 SYCYAVRLSAAEDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALL 300 SYCYAVRLSAAEDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALL Sbjct: 241 SYCYAVRLSAAEDPLVQSLRQELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALL 300 Query: 301 NLYEHHHSAHLRQRAVQKLYEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQE 360 NLYEHHHSAHLRQRAVQKLYEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQE Sbjct: 301 NLYEHHHSAHLRQRAVQKLYEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQE 360 Query: 361 HVSRIPDYLWMGLDGMKMQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRL 420 HVSRIPDYLWMGLDGMKMQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRL Sbjct: 361 HVSRIPDYLWMGLDGMKMQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRL 420 Query: 421 SQVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPR 480 SQVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPR Sbjct: 421 SQVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPR 480 Query: 481 ERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQA 540 ERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQA Sbjct: 481 ERLCDAVAVLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQA 540 Query: 541 LKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMG 600 LKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMG Sbjct: 541 LKYFHKRFPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMG 600 Query: 601 QTYRDGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRYLQSAQSQIHNTCWAMMGLM 660 QTYRDGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRY+QSAQSQIHNTCWAMMGLM Sbjct: 601 QTYRDGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRYVQSAQSQIHNTCWAMMGLM 660 Query: 661 AVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRFS 720 AVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRFS Sbjct: 661 AVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIWALGRFS 720 Query: 721 QLYPERALAGHP 732 QLYPERALAGHP Sbjct: 721 QLYPERALAGHP 732 >1UMP-A nrPDB Length = 631 Score = 871 bits (2251), Expect = 0.0, Method: Composition-based stats. Identities = 164/659 (24%), Positives = 278/659 (42%), Gaps = 57/659 (8%) Query: 80 GMTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARIPLPAGYREEIVRYLRSVQLPDG 139 + + + Q ++G+W G + + ++ CH+ + E+I RYL Q DG Sbjct: 18 AVEYLLSCQKDEGYWWGPLLSNVTMEAEYVLLCHILDR-VDRDRMEKIRRYLLHEQREDG 76 Query: 140 GWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNILHKKGGAVAIPSWGKFWLAV 199 W L+ + T YV+L+ +G+ D+ + +A + +GG + + + WLA+ Sbjct: 77 TWALYPGGPPDLDTTIEAYVALKYIGMSRDEEPMQKALRFIQSQGGIESSRVFTRMWLAL 136 Query: 200 LNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLPMSYCYAVRLSAAEDPLVQSL 259 + Y WE + + PE+ P + R + +S + + PL + Sbjct: 137 VGEYPWEKVPMVPPEIMFLGKRMPLNIYEFGSWARATVVALSIVMSRQPVF---PLPERA 193 Query: 260 R-QELYVEDFASIDWLAQRNNVAPDELYTPHSWLLRVVYALLNLYEHHHSAHLRQRAVQK 318 R ELY D W+ + L+ Y+ R+ A + Sbjct: 194 RVPELYETDVPP----------RRRGAKGGGGWIFDALDRALHGYQKLSVHPFRRAAEIR 243 Query: 319 LYEHIVADDRFTKSISIGPISKTINMLVRWYVDGPASTAFQEHVSRIPDYL--WMGLD-- 374 + ++ +R S G I W+ A +++ P ++ W GL+ Sbjct: 244 ALDWLL--ERQAGDGSWGGIQPP------WFYALIALKILD--MTQHPAFIKGWEGLELY 293 Query: 375 ------GMKMQGTNGSQIWDTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRLSQVPDNPP 428 G M + S +WDT A+ AL AG P L KA E+L Q+ P Sbjct: 294 GVELDYGGWMFQASISPVWDTGLAVLALRAAG---LPADHDRLVKAGEWLLDRQI-TVPG 349 Query: 429 DYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEALKAVLLLQEKCPHVTEHIPRERLCDAVA 488 D+ ++ GGF+F + + D TA + A+ L + P E R+ + Sbjct: 350 DWAVKRPNLKPGGFAFQFDNVYYPDVDDTAVVVWALNTL--RLPD--ERRRRDAMTKGFR 405 Query: 489 VLLNMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQALKYFHKRF 548 ++ M++ +GG+ Y+ L + P FG++ D + T+ V++ F Sbjct: 406 WIVGMQSSNGGWGAYDVDNTSDLPNHI-PFCDFGEV-TDPPSEDVTAHVLECFGSFGYD- 462 Query: 549 PEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMGQTYRDGTA 608 + + + + +E+ +R+Q+ DGSW G WGV + YGT + A +G R+ Sbjct: 463 ------DAWKVIRRAVEYLKREQKPDGSWFGRWGVNYLYGTGAVVSALKAVGIDTRE--- 513 Query: 609 CAEVSRACDFLLSRQMADGGWGEDFESCEERRYLQSAQSQIHNTCWAMMGLMAVRHPDIE 668 + +A D++ Q DGGWGED S E+ Y S T WA+M L+A + E Sbjct: 514 -PYIQKALDWVEQHQNPDGGWGEDCRSYEDPAYAGKGASTPSQTAWALMALIAGGRAESE 572 Query: 669 AQERGVRCLLEKQLPNGDWPQENIAGV-FNKSCAISYTSYRNIFPIWALGRFSQLYPER 726 A RGV+ L+E Q P+G W + G F + YT YR++FP ALGR+ Q R Sbjct: 573 AARRGVQYLVETQRPDGGWDEPYYTGTGFPGDFYLGYTMYRHVFPTLALGRYKQAIERR 631 Score = 38.9 bits (89), Expect = 0.007, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 22/137 (16%) Query: 67 LPKAHTAFEGALNGMTFYVGLQAEDGHW-------TGDY--------GGPLFLLPGLLIT 111 LP + G + VG+Q+ +G W T D G + P +T Sbjct: 390 LPDERRRRDAMTKGFRWIVGMQSSNGGWGAYDVDNTSDLPNHIPFCDFGEVTDPPSEDVT 449 Query: 112 CHVARIPLPAGY------REEIVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILG 165 HV GY V YL+ Q PDG W + ++GT +L+ +G Sbjct: 450 AHVLECFGSFGYDDAWKVIRRAVEYLKREQKPDGSW-FGRWGVNYLYGTGAVVSALKAVG 508 Query: 166 VGPDDPDLVRARNILHK 182 + +P + +A + + + Sbjct: 509 IDTREPYIQKALDWVEQ 525 Score = 28.5 bits (62), Expect = 9.5, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 6/73 (8%) Query: 558 ETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMGQTYRDGTACAEVSRACD 617 TL + +E+ Q+ +G W WG + T C D ++ R Sbjct: 13 RTLDRAVEYLLSCQKDEGYW---WGPLLSNVTMEAEYVLLCHILDRVDRDRMEKIRR--- 66 Query: 618 FLLSRQMADGGWG 630 +LL Q DG W Sbjct: 67 YLLHEQREDGTWA 79 >3S9V-A nrPDB Length = 785 Score = 37.0 bits (84), Expect = 0.029, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 21/50 (42%) Query: 605 DGTACAEVSRACDFLLSRQMADGGWGEDFESCEERRYLQSAQSQIHNTCW 654 DG+ +++L Q+ DG WGE F R L + I T W Sbjct: 69 DGSDNPHFPETVEWILQNQLKDGSWGEGFYFLAYDRILATLACIITLTLW 118 >5JPN-B nrPDB Length = 767 Score = 33.9 bits (76), Expect = 0.23, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 3/87 (3%) Query: 548 FPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMGQTYRDGT 607 P + + +G ++ ++ADGS+ +W + TW + Sbjct: 358 LPPETKDHAVDLIQKGYMRIQQFRKADGSY-AAW-LSRDSSTWLTAFVLKVLSLAQEQVG 415 Query: 608 ACAE-VSRACDFLLSRQMADGGWGEDF 633 E + ++LLS+Q ADG + + Sbjct: 416 GSPEKLQETSNWLLSQQQADGSFQDPC 442 >4XAM-C nrPDB Length = 690 Score = 33.9 bits (76), Expect = 0.25, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 3/87 (3%) Query: 548 FPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMGQTYRDGT 607 P + + +G ++ ++ADGS+ +W + TW + Sbjct: 281 LPPETKDHAVDLIQKGYMRIQQFRKADGSY-AAW-LSRDSSTWLTAFVLKVLSLAQEQVG 338 Query: 608 ACAE-VSRACDFLLSRQMADGGWGEDF 633 E + ++LLS+Q ADG + + Sbjct: 339 GSPEKLQETSNWLLSQQQADGSFQDPC 365 >3SDU-A nrPDB Length = 817 Score = 33.9 bits (76), Expect = 0.26, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 16/26 (61%) Query: 605 DGTACAEVSRACDFLLSRQMADGGWG 630 DG+A + + D++L Q+ DG WG Sbjct: 96 DGSARPQFPQTVDWILKNQLKDGSWG 121 >4PW2-A nrPDB Length = 585 Score = 33.5 bits (75), Expect = 0.33, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 24/112 (21%) Query: 615 ACDFLLSRQMADGGW--------GEDFESCEERRYLQSAQSQIHNT---CWAMM------ 657 A D+L+ Q GGW GE F + E Y AQ Q +T + M Sbjct: 376 ASDWLVRNQDERGGWPIMVTRKLGEGFRALEPGWYSAMAQGQAMSTLVRAYLMTKDDRYL 435 Query: 658 --GLMAVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSY 707 L A + +++ GV+ + + DW +E S ++ Y Sbjct: 436 KAALRATGPFKLPSEQHGVKAVFMNKY---DWYEEY--PTIPSSFVLNGFIY 482 >3P5P-A nrPDB Length = 764 Score = 33.1 bits (74), Expect = 0.40, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 37/97 (38%), Gaps = 15/97 (15%) Query: 605 DGTACAEVSRACDFLLSRQMADGGWG--EDFESCEERRYLQSAQSQIHNTCWAMMGLMAV 662 DG+ +A +++ + Q+ DG WG F C+ R L + S I + W Sbjct: 48 DGSEKPRFPQALNWVFNNQLQDGSWGIESHFSLCD--RLLNTTNSVIALSVW------KT 99 Query: 663 RHPDIEAQERGVRCLLEKQLPNGDWPQ--ENIAGVFN 697 H ++ +G + E + + + +F Sbjct: 100 GHSQVQ---QGAEFIAENLRLLNEEDELSPDFQIIFP 133 >3HXF-B nrPDB Length = 331 Score = 33.1 bits (74), Expect = 0.42, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 1/70 (1%) Query: 81 MTFYVGLQAEDGHWTGDYGGPLFLLPGLLITCHVARI-PLPAGYREEIVRYLRSVQLPDG 139 + + LQ EDG + GD G + +A + L A E+ + ++ S DG Sbjct: 120 VAYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDG 179 Query: 140 GWGLHIEDKS 149 G+G +S Sbjct: 180 GFGCRPGSES 189 >5LK4-A nrPDB Length = 219 Score = 33.1 bits (74), Expect = 0.49, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 11/85 (12%) Query: 97 DYGGPLFLLPGLLITCHVARIP------LPAGYREEIVRYLRSVQLPDGGWGLHIEDKST 150 D P F+ T H A IP P G++ E R + DGG +D S Sbjct: 54 DILSPQFMYGSRAFTKHPADIPDYYKQSFPEGFKWE-----RVMNFEDGGAVTVTQDTSL 108 Query: 151 VFGTALNYVSLRILGVGPDDPDLVR 175 GT + V LR PD P + + Sbjct: 109 EDGTLIYKVKLRGTNFPPDGPVMQK 133 >1HZF-A nrPDB Length = 367 Score = 32.8 bits (73), Expect = 0.52, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 3/87 (3%) Query: 548 FPEHRAAEIRETLTQGLEFCRRQQRADGSWEGSWGVCFTYGTWFGLEAFACMGQTYRDGT 607 P + + +G ++ ++ADGS+ +W + TW + Sbjct: 81 LPPETKDHAVDLIQKGYMRIQQFRKADGSY-AAW-LSRDSSTWLTAFVLKVLSLAQEQVG 138 Query: 608 ACAE-VSRACDFLLSRQMADGGWGEDF 633 E + ++LLS+Q ADG + + Sbjct: 139 GSPEKLQETSNWLLSQQQADGSFQDPC 165 >3F8T-A nrPDB Length = 506 Score = 32.0 bits (71), Expect = 0.96, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 21/63 (33%), Gaps = 9/63 (14%) Query: 104 LLPGLLITC-----HVARIPLPAGYREEIVRY----LRSVQLPDGGWGLHIEDKSTVFGT 154 LL G + C HV P G ++ R L +V D GW L G Sbjct: 243 LLAGYPVVCSEILHHVLDHLAPRGVYVDLRRTELTDLTAVLKEDRGWALRAGAAVLADGG 302 Query: 155 ALN 157 L Sbjct: 303 ILA 305 >2ZIR-B nrPDB Length = 440 Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 20/28 (71%) Query: 124 REEIVRYLRSVQLPDGGWGLHIEDKSTV 151 RE++++YL S++ PDG + +H+ + V Sbjct: 177 REKLLQYLYSLKQPDGSFLMHVGGEVDV 204 >6I01-A nrPDB Length = 527 Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 41/112 (36%), Gaps = 24/112 (21%) Query: 615 ACDFLLSRQMADGGW--------GEDFESCEERRYLQSAQSQIHNT---CWAMM------ 657 A D+L+ Q GGW GE F+S E Y AQ Q +T + + Sbjct: 318 ASDWLVRNQDEKGGWPIMVTRKLGEGFKSLEPGWYSAMAQGQAISTLVRAYLLTKDHIFL 377 Query: 658 --GLMAVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSY 707 L A +++ GV+ + + DW +E S ++ Y Sbjct: 378 NSALRATAPYKFLSEQHGVKAVFMNKH---DWYEEY--PTTPSSFVLNGFMY 424 >4DCH-A nrPDB Length = 473 Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 34/95 (35%) Query: 402 HHRPEFSSCLQKAHEFLRLSQVPDNPPDYQKYYRQMRKGGFSFSTLDCGWIVSDCTAEAL 461 H + A E +SQV + D ++ Y + G ST DC + C + + Sbjct: 317 HGEASEQLRTRGAFETRFVSQVESDTGDRKQIYNILSTLGLRPSTTDCDIVRRACESVST 376 Query: 462 KAVLLLQEKCPHVTEHIPRERLCDAVAVLLNMRNP 496 +A + V + R D + + + + Sbjct: 377 RAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGS 411 >2V4E-A nrPDB Length = 220 Score = 30.1 bits (66), Expect = 3.8, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 7/83 (8%) Query: 97 DYGGPLFLLPGLLITCHVARIPLPAGYRE----EIVRYLRSVQLPDGGWGLHIEDKSTVF 152 D P F+ + T H A IP Y++ E ++ R + DGG +D S Sbjct: 54 DILSPQFMYGSKVYTKHPADIP---DYKKLSFPEGFKWERVMNFEDGGVVTVTQDSSLQD 110 Query: 153 GTALNYVSLRILGVGPDDPDLVR 175 GT + +V + D P + + Sbjct: 111 GTFIYHVKFIGVNFPSDGPVMQK 133 >6NTW-A nrPDB Length = 585 Score = 29.7 bits (65), Expect = 4.2, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 11/77 (14%) Query: 658 GLMAVRHPDIEAQERGVRCLLEKQLPNGDWPQENIAGVFNKSCAISYTSYRNIFPIW--- 714 +MA P E R +E QLP G V+ + Y + R++ P+W Sbjct: 28 AIMAGIQPLPEGAAEKARTQIESQLPAG------YKPVYLNQLQLLYAA-RDMQPMWENR 80 Query: 715 -ALGRFSQLYPERALAG 730 A+ F Q E A+AG Sbjct: 81 DAVKAFQQQLAEVAIAG 97 >3ZXJ-A nrPDB Length = 542 Score = 29.3 bits (64), Expect = 6.1, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 24/75 (32%), Gaps = 2/75 (2%) Query: 166 VGPDDPDLVRARNILHKKGGAVAIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWAPAH 225 V L A H +GG V P ++A ++ Y + + P W W Sbjct: 234 VSRIQGPLANA-GFAH-QGGIVDAPDGTWHYVAFMDAYPGGRIPVVAPLRWTADGWPEVV 291 Query: 226 PSTLWCHCRQVYLPM 240 + +P+ Sbjct: 292 TDSQGRWGTSYPIPV 306 >4V7O-A6 nrPDB Length = 997 Score = 28.9 bits (63), Expect = 7.9, Method: Composition-based stats. Identities = 8/23 (34%), Positives = 11/23 (47%) Query: 212 FPEMWLFPDWAPAHPSTLWCHCR 234 FP ++ P W P + S L R Sbjct: 926 FPYVFPLPPWIPKNLSNLSSWAR 948 >3PGB-A nrPDB Length = 797 Score = 28.9 bits (63), Expect = 8.9, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Query: 144 HIED-KSTVFGTALNYVSLRILGVGPDDP--DLVRARNILHKKGGAVAIPSWGK 194 H D +TVF TA + V+ L P DP + V + + G A A+ ++G+ Sbjct: 701 HTGDLPNTVFTTAHSGVAFTPLNYLPGDPSRETVNMVRVDYSDGAATAVRTFGQ 754 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.131 0.396 Lambda K H 0.267 0.0404 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,900,402 Number of Sequences: 36641 Number of extensions: 1296391 Number of successful extensions: 3269 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 21 Number of HSP's that attempted gapping in prelim test: 3166 Number of HSP's gapped (non-prelim): 67 length of query: 732 length of database: 10,336,785 effective HSP length: 104 effective length of query: 628 effective length of database: 6,526,121 effective search space: 4098403988 effective search space used: 4098403988 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 63 (28.9 bits)