BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= P48163
         (572 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

2AW5-A nrPDB                                                         1144   0.0  
1GQ2-A nrPDB                                                          935   0.0  
1PJL-A nrPDB                                                          657   0.0  
1LLQ-A nrPDB                                                          616   e-176
5OU5-A nrPDB                                                          569   e-162
6C7N-A nrPDB                                                          558   e-159
3NV9-A nrPDB                                                          108   9e-24
2DVM-A nrPDB                                                          101   1e-21
5CEE-A nrPDB                                                           94   2e-19
2A9F-A nrPDB                                                           87   2e-17
2HAE-A nrPDB                                                           81   1e-15
3MM1-A nrPDB                                                           31   1.8  
1CT9-A nrPDB                                                           31   1.9  
6CZM-A nrPDB                                                           30   2.6  
4U3Q-A nrPDB                                                           30   3.3  
4X2Q-A nrPDB                                                           29   4.9  
5EVM-A nrPDB                                                           29   5.2  
1ZC0-A nrPDB                                                           29   6.2  

>2AW5-A nrPDB
          Length = 575

 Score = 1144 bits (2959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 552/555 (99%), Positives = 553/555 (99%)

Query: 10  HTHQRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDF 69
            + QRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDF
Sbjct: 21  QSMQRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDF 80

Query: 70  DRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHD 129
           DRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHD
Sbjct: 81  DRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHD 140

Query: 130 RGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECL 189
           RGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECL
Sbjct: 141 RGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECL 200

Query: 190 PVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFAN 249
           PVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFAN
Sbjct: 201 PVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFAN 260

Query: 250 VNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGI 309
           VNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGI
Sbjct: 261 VNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGI 320

Query: 310 AHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHEEMKNLEAIVQ 369
           AHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHEEMKNLEAIVQ
Sbjct: 321 AHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHEEMKNLEAIVQ 380

Query: 370 EIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAI 429
           EIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAI
Sbjct: 381 EIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAI 440

Query: 430 FASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQV 489
           FASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQV
Sbjct: 441 FASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQV 500

Query: 490 SDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDY 549
           SDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDY
Sbjct: 501 SDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDY 560

Query: 550 DQILPDCYSWPEEVQ 564
           DQILPDCYSWPEEVQ
Sbjct: 561 DQILPDCYSWPEEVQ 575


>1GQ2-A nrPDB
          Length = 555

 Score =  935 bits (2416), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/555 (78%), Positives = 502/555 (90%)

Query: 13  QRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDFDRY 72
           ++GY + R+PHLNK +AFTLEERQQLNIHGLLPP F  Q+ QV  ++KNFE L SD DRY
Sbjct: 1   KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRY 60

Query: 73  LLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHDRGH 132
           +LLM LQDRNEKLFY+VLTSDIE+FMPIVYTPTVGLACQ Y L FR+PRGLFITIHDRGH
Sbjct: 61  ILLMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGH 120

Query: 133 IASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPVI 192
           IA++L +WPE VIKAIVVTDGERILGLGDLGC GMGIPVGKLALYTACGG+ P +CLPV+
Sbjct: 121 IATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVKPHQCLPVM 180

Query: 193 LDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNA 252
           LDVGT+NE LLKDPLYIGLR +R+RG  YDD LDEFMEAV+S+YGMNCLIQFEDFAN NA
Sbjct: 181 LDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANA 240

Query: 253 FRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHL 312
           FRLL+KYRN+YCTFNDDIQGTASVAVAGLLAALRITKN+LSD T+LFQGAGEAALGIA+L
Sbjct: 241 FRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANL 300

Query: 313 IVMALEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHEEMKNLEAIVQEIK 372
           IVMA++KEG+ KE+AIK+IW+VDSKGLIVKGRASLT EKE FAHEH EMKNLE IV++IK
Sbjct: 301 IVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHCEMKNLEDIVKDIK 360

Query: 373 PTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAIFAS 432
           PT LIGVAAIGGAF++QIL+DMAAFN+RPIIFALSNPTSKAEC+AEQ YK T+GR IFAS
Sbjct: 361 PTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPTSKAECTAEQLYKYTEGRGIFAS 420

Query: 433 GSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDK 492
           GSPFDPVTLP+GQTLYPGQGNNSYVFPGVALGV++CGL+ I D++FLTTAEVIAQ+VS++
Sbjct: 421 GSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVSEE 480

Query: 493 HLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDYDQI 552
           +L+EGRLYPPL TI+ VSLKIA +I K+AY+  TA+ YP+P++ EAF+RSQ+YSTDY+  
Sbjct: 481 NLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFIRSQVYSTDYNCF 540

Query: 553 LPDCYSWPEEVQKIQ 567
           + D Y+WPEE  K++
Sbjct: 541 VADSYTWPEEAMKVK 555


>1PJL-A nrPDB
          Length = 584

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/560 (55%), Positives = 411/560 (73%), Gaps = 3/560 (0%)

Query: 5   APRRRHTHQRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEH 64
           A R  H  ++G  L  NP  NK +AFTL+ERQ L + GLLPP   +Q+IQ LR  +N + 
Sbjct: 15  ACRHLHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKK 74

Query: 65  LNSDFDRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLF 124
           + S  ++Y+ +M +Q+RNEKLFYR+L  DIE  MPIVYTPTVGLAC QY  +FR+P+GLF
Sbjct: 75  MTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLF 134

Query: 125 ITIHDRGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMN 184
           I+I DRGH+ S+++ WPE+ +KA+VVTDGERILGLGDLG  GMGIPVGKL LYTAC G+ 
Sbjct: 135 ISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIR 194

Query: 185 PQECLPVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQF 244
           P  CLPV +DVGT+N  LLKDP Y+GL Q+R R  +YDD +DEFM+A++ +YG N LIQF
Sbjct: 195 PDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQF 254

Query: 245 EDFANVNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGE 304
           EDF N NAFR L KYR +YCTFNDDIQGTA+VA+AGLLAA ++    +S+  ILF GAGE
Sbjct: 255 EDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGE 314

Query: 305 AALGIAHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGR-ASLTQEKEKFAHEHEEM-- 361
           AALGIA+LIVM++ + GL +++A KKIW+ D  GL+VKGR A +   +E F H   E   
Sbjct: 315 AALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIP 374

Query: 362 KNLEAIVQEIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCY 421
              E  V  +KP+ +IGVA  G  F+  +++ MA+ NERP+IFALSNPT++AEC+AE+ Y
Sbjct: 375 DTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAY 434

Query: 422 KITKGRAIFASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTT 481
            +T+GR +FASGSPF PV L +G+   PGQGNN Y+FPGVAL V+ C  R I+D++FL  
Sbjct: 435 TLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEA 494

Query: 482 AEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVR 541
           A+ +  Q++D+ L +GRLYPPL  I++VS+ IA K+ +  Y  K A  YPEP++K  +V+
Sbjct: 495 AKALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVK 554

Query: 542 SQMYSTDYDQILPDCYSWPE 561
            + + ++YD +LPD Y WPE
Sbjct: 555 ERTWRSEYDSLLPDVYEWPE 574


>1LLQ-A nrPDB
          Length = 605

 Score =  616 bits (1588), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 292/559 (52%), Positives = 398/559 (71%), Gaps = 3/559 (0%)

Query: 6   PRRRHTHQRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHL 65
           P R    +R   L + P LNK + F+L ERQ L +HGLLPP+F +QE Q  RV+      
Sbjct: 30  PERVTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQ 89

Query: 66  NSDFDRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFI 125
            +D  RY+ L  LQDRNEKLFYRV+   +++ MPIVYTPTVGLACQ +  ++RKP+GL+I
Sbjct: 90  PNDLARYIQLDGLQDRNEKLFYRVVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYI 149

Query: 126 TIHDRG--HIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGM 183
           TI+D     I  +L+ W E+ ++AIVVTDGERILGLGDLG  G+GIPVGKLALY A GG+
Sbjct: 150 TINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYGIGIPVGKLALYVALGGV 209

Query: 184 NPQECLPVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQ 243
            P+ CLPV+LDVGT N +LL DP YIGLR +RVRG +YD  LD FM+A + KYG   LIQ
Sbjct: 210 QPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQ 269

Query: 244 FEDFANVNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAG 303
           FEDFAN NAFRLL+KY+++Y  FNDDIQGTASV VAGLL   R+TK  +S +  LF GAG
Sbjct: 270 FEDFANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAG 329

Query: 304 EAALGIAHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHEEMKN 363
            A+ GIA +IV  ++ EG+ KE+A  +I+L+D  GL+ K R  +     +FA +  E  +
Sbjct: 330 AASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQFAKDMPETTS 389

Query: 364 LEAIVQEIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKI 423
           +  +++  +P ALIG + + GAF+E++++ MA  NERPIIFALSNPTSKAEC+AE+ Y  
Sbjct: 390 ILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALSNPTSKAECTAEEAYTF 449

Query: 424 TKGRAIFASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAE 483
           T G A++ASGSPF    L NG T  PGQGNN+Y+FPGVALG +   +R + +++FL  A+
Sbjct: 450 TNGAALYASGSPFPNFEL-NGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAK 508

Query: 484 VIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQ 543
            +A  V++  L+ GR+YP L  IR++S++IA ++ K  Y+  TA +YP+P++ E +VR+Q
Sbjct: 509 KVASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYPQPEDLEKYVRAQ 568

Query: 544 MYSTDYDQILPDCYSWPEE 562
           +Y+T+Y++++   Y WPE+
Sbjct: 569 VYNTEYEELINATYDWPEQ 587


>5OU5-A nrPDB
          Length = 576

 Score =  569 bits (1466), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 276/537 (51%), Positives = 371/537 (69%), Gaps = 3/537 (0%)

Query: 15  GYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDFDRYLL 74
           GY L R+PH NK LAFT EER    + GLLPP+  SQE+Q+ + +       +   RY+ 
Sbjct: 37  GYTLLRDPHHNKGLAFTEEERDGHYLRGLLPPAVLSQELQIKKFMNTLRQYQTPLQRYIA 96

Query: 75  LMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHDRGHIA 134
           +M+LQ+ +E+LFY++L  ++ + +P VYTPTVG ACQ+Y  +F +P+GL++++ D+G + 
Sbjct: 97  MMNLQETDERLFYKLLIDNVVELLPFVYTPTVGEACQKYGSIFGRPQGLYVSLKDKGKVL 156

Query: 135 SVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPVILD 194
            VL  WP   I+ I VTDGERILGLGDLGC GMGIPVGKLALYTA GG++P  CLP+ +D
Sbjct: 157 EVLRNWPHRNIQVICVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVDPSVCLPITID 216

Query: 195 VGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFR 254
           VGT NE+LL D  YIGLRQ+R  G EYD+ ++EFM AV   YG   LIQFEDFAN NAF 
Sbjct: 217 VGTNNEKLLNDEFYIGLRQKRATGEEYDELIEEFMSAVKQFYGEKVLIQFEDFANHNAFD 276

Query: 255 LLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHLIV 314
           LL KY   +  FNDDIQGTASV +AGLLAAL++    L++QT LF GAGEA  GIA LI 
Sbjct: 277 LLEKYSKSHLVFNDDIQGTASVVLAGLLAALKMVGGTLAEQTYLFLGAGEAGTGIAELIA 336

Query: 315 MALEKE-GLPKEKAIKKIWLVDSKGLIVKGR-ASLTQEKEKFAHEHEEMKNLEAIVQEIK 372
           + + K+   P E+  KK+WLVDSKGLIV  R  SL   K+ +AHEHE +K L   VQ IK
Sbjct: 337 LEISKQTNAPIEECRKKVWLVDSKGLIVDSRKGSLQPFKKPWAHEHEPLKTLYDAVQSIK 396

Query: 373 PTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAIFAS 432
           PT LIG + +G  F+++I++ M++FNERPIIF+LSNPTS +EC+AEQ Y  ++GR+IFAS
Sbjct: 397 PTVLIGTSGVGRTFTKEIIEAMSSFNERPIIFSLSNPTSHSECTAEQAYTWSQGRSIFAS 456

Query: 433 GSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDK 492
           GSPF PV    G+T  PGQ NN+Y+FPG+ LG+V  G  ++ +++ L  ++ +A Q +  
Sbjct: 457 GSPFAPVEY-EGKTFVPGQSNNAYIFPGLGLGLVISGAVRVHEDMLLAASKALADQATQD 515

Query: 493 HLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDY 549
           + E+G ++PP  +IR +S  IA  +   AY+   AT  P P +   +  + MY+  Y
Sbjct: 516 NFEKGSIFPPFTSIRKISAHIAAAVAAKAYELGLATRLPPPSDLVKYAENCMYTPVY 572


>6C7N-A nrPDB
          Length = 613

 Score =  558 bits (1438), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 276/537 (51%), Positives = 370/537 (68%), Gaps = 3/537 (0%)

Query: 15  GYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDFDRYLL 74
           GY L R+P  NK LAFT  ER    + GLLPP+  SQE+Q+ + + N          Y+ 
Sbjct: 74  GYTLLRDPRHNKGLAFTERERDAHYLRGLLPPAVVSQELQIKKFMNNLRQYQLPIQCYMA 133

Query: 75  LMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHDRGHIA 134
           +M+LQ+ +E+LFY++L  ++ + +P VYTPTVG ACQ+Y  +F +P+GL++++ D+G + 
Sbjct: 134 MMNLQETDERLFYKLLIENVVELLPYVYTPTVGEACQKYGSIFGRPQGLYVSLKDKGRVL 193

Query: 135 SVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPVILD 194
            VL  WP   ++ I VTDGERILGLGDLGC GMGIPVGKLALYTA GG++P  CLP+ +D
Sbjct: 194 EVLRNWPHRNVQVICVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVDPSACLPITID 253

Query: 195 VGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFR 254
           VGT NE+LL D  YIGLRQ+R RG EYD+ ++EFM AV + YG   LIQFEDFAN NAF 
Sbjct: 254 VGTNNEKLLNDEFYIGLRQKRARGEEYDELMEEFMAAVKTFYGEKVLIQFEDFANHNAFD 313

Query: 255 LLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHLIV 314
           LL KY   +  FNDDIQGTASV +AGLLAAL++    L++QT LF GAGEA  GIA LI 
Sbjct: 314 LLEKYSKTHLVFNDDIQGTASVVLAGLLAALKMVGGTLAEQTYLFLGAGEAGTGIAELIA 373

Query: 315 MALEKEG-LPKEKAIKKIWLVDSKGLIVKGR-ASLTQEKEKFAHEHEEMKNLEAIVQEIK 372
           + + K+   P E+  KK+WLVDSKGLIV  R +SL   K+ +AHEHE +  L   VQ IK
Sbjct: 374 LEMSKQTKAPIEECRKKVWLVDSKGLIVDSRKSSLAPFKKPWAHEHEPLTTLYDAVQSIK 433

Query: 373 PTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAIFAS 432
           PT LIG + +G  F+++I++ MA+ NERPIIF+LSNPTS +EC+AEQ Y  T+GRA+FAS
Sbjct: 434 PTVLIGTSGVGRTFTKEIVEAMASINERPIIFSLSNPTSHSECTAEQAYTWTQGRAVFAS 493

Query: 433 GSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDK 492
           GSPF PV   +G+T  PGQ NN+Y+FPG+ LG+V  G  ++ +++ L  +  +A Q +++
Sbjct: 494 GSPFAPVEY-DGKTFVPGQSNNAYIFPGLGLGLVISGAVRVHEDMLLAASAALADQATEE 552

Query: 493 HLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDY 549
           +   G ++PP   IR +S  IA  +   AY+   AT  P P++  A+  S MYS  Y
Sbjct: 553 NFVTGSIFPPFTNIRKISAYIAAAVAAKAYELGLATRLPPPKDLVAYAESCMYSPVY 609


>3NV9-A nrPDB
          Length = 487

 Score =  108 bits (269), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 162/353 (45%), Gaps = 69/353 (19%)

Query: 149 VVTDGERILGLGDLGC-NGMGIPVGKLALYTACGGMNPQECLPVILDVGTENEELLKDPL 207
           VV+D  R+LG GD+    G+G+  GK  L    GG+   + +P+ +D  ++N+E   DP 
Sbjct: 95  VVSDSTRVLGDGDVTPPGGLGVMEGKALLMKYLGGI---DAVPICID--SKNKEGKNDP- 148

Query: 208 YIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQYC--- 264
                          D + EF++ +   +G    I  ED +  N +++L+  R + C   
Sbjct: 149 ---------------DAVIEFVQRIQHTFGA---INLEDISQPNCYKILDVLR-ESCDIP 189

Query: 265 TFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKEGLPK 324
            ++DD QGTASV +AGLL AL++ K  + +  ++F GAG +      LIV A        
Sbjct: 190 VWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVTAGADP---- 245

Query: 325 EKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHE--EMKN---LEAIVQE-IKPTALIG 378
               KKI + DSKG +  GR  + ++  +F  + E  E  N     +I +  +    LI 
Sbjct: 246 ----KKIVMFDSKGSLHNGREDIKKDT-RFYRKWEICETTNPSKFGSIAEACVGADVLIS 300

Query: 379 VAAIG-GAFSEQILKDMAAFNERPIIFALSNPTSKA---ECSAEQCYKITKGRAIFASGS 434
           ++  G G    + +K M    E+PI+F  +NP  +    E      Y +  GR  F    
Sbjct: 301 LSTPGPGVVKAEWIKSMG---EKPIVFCCANPVPEIYPYEAKEAGAYIVATGRGDF---- 353

Query: 435 PFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQ 487
                         P Q NNS  FPG+  G +    R+ITDN+ +  +  +A+
Sbjct: 354 --------------PNQVNNSVGFPGILKGALIVRARKITDNMAIAASRALAE 392


>2DVM-A nrPDB
          Length = 439

 Score =  101 bits (251), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 197/438 (44%), Gaps = 81/438 (18%)

Query: 98  MPIVYTPTVGLACQQYSLVFRKPRGLFITIHDRGHIASVLNAWPEDVIKAIVVTDGERIL 157
           + + YTP V   C++   + R P G       +G++ +V             V+DG RIL
Sbjct: 34  LTLAYTPGVAEPCKE---IARDP-GKVYEYTSKGNLVAV-------------VSDGSRIL 76

Query: 158 GLGDLG-CNGMGIPVGKLALYTACGGMNPQECLPVILDVGTENEELLKDPLYIGLRQRRV 216
           GLG++G   G+ +  GK  L+   GG++     P++                       +
Sbjct: 77  GLGNIGPLAGLPVMEGKALLFKRFGGVD---AFPIM-----------------------I 110

Query: 217 RGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQY--CTFNDDIQGTA 274
           +  E + F+D  ++A++  +G    I  ED A+   F +L + R +     F+DD QGTA
Sbjct: 111 KEQEPNKFID-IVKAIAPTFGG---INLEDIASPKCFYILERLREELDIPVFHDDQQGTA 166

Query: 275 SVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKEGLPKEKAIKKIWLV 334
           +V +AGLL AL++   K+S+ T+   GAG A  G A L ++    E   K + ++ + LV
Sbjct: 167 AVVLAGLLNALKVVGKKISEITLALFGAGAA--GFATLRILT---EAGVKPENVRVVELV 221

Query: 335 DSKGLIVKGRASLTQ--EKEKFAHEHEEMKNLEAIVQEIKPTA--LIGVAAIG-GAFSEQ 389
           + K  I+     L +      +  +    +N+E   QE    A  LI     G G    Q
Sbjct: 222 NGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEALKDADVLISFTRPGPGVIKPQ 281

Query: 390 ILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAIFASGSPFDPVTLPNGQTLYP 449
            ++ M   NE  I+F L+NP    E   E+  K   G  I A+           G++ YP
Sbjct: 282 WIEKM---NEDAIVFPLANPVP--EILPEEAKK--AGARIVAT-----------GRSDYP 323

Query: 450 GQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDV 509
            Q NN   FPG+  G +    R ITD++ +  A+ IA  V +   EE  +  PLN I  V
Sbjct: 324 NQINNLLGFPGIFRGALDVRARTITDSMIIAAAKAIASIVEEPS-EENIIPSPLNPI--V 380

Query: 510 SLKIAEKIVKDAYQEKTA 527
             + A  + ++A +E  A
Sbjct: 381 YAREARAVAEEAMKEGVA 398


>5CEE-A nrPDB
          Length = 413

 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/360 (24%), Positives = 160/360 (44%), Gaps = 69/360 (19%)

Query: 149 VVTDGERILGLGDLGCNGMGIPV--GKLALYTACGGMNPQECLPVILDVGTENEELLKDP 206
           V+T+G  +LGLG++G     +PV  GK  L+    G+   +  P+ +D  T+++E++   
Sbjct: 89  VITNGTAVLGLGNIGPKA-SLPVMEGKAILFKELAGI---DSFPICID-STDSQEIV--- 140

Query: 207 LYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLN--KYRNQYC 264
                                 +  +S+ +G    I  ED  +     + +  K +    
Sbjct: 141 --------------------NIVSKISTVFGA---INLEDIKSPQCIEIEDALKAKLDIP 177

Query: 265 TFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKEGLPK 324
            F+DD  GTA V  AG+L AL++ K  + D  ++  GAG A + IA ++++         
Sbjct: 178 VFHDDQHGTAIVVAAGILNALKVVKKSIEDVQVVINGAGSAGMAIAKMLLLL-------- 229

Query: 325 EKAIKKIWLVDSKGLIVKGRASLTQEKEKF---AHEHEEMKNLEAIVQEIKPTALIGVAA 381
              +  + LVD  G + KG A+L + ++K     ++++E   L+ +++       IGV+A
Sbjct: 230 --KVNNVVLVDKTGTLYKGVANLNEPQKKLVEVTNKYQEKGTLKEVLK--GKDIFIGVSA 285

Query: 382 IGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAIFASGSPFDPVTL 441
            G   +E +    A   +  I+FAL+NP    E   ++  K   G  I A+         
Sbjct: 286 PGIVTAEMV----ATMAKDAIVFALANPVP--EIMPDEAKK--GGARIVAT--------- 328

Query: 442 PNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRLYP 501
             G++ +P Q NN   FPGV  G +     QIT+ +       +   + ++ L E  + P
Sbjct: 329 --GRSDFPNQVNNCLAFPGVFRGTLDAKATQITEEMKKAATYALKNIIKEQDLNENNILP 386


>2A9F-A nrPDB
          Length = 398

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 157/371 (42%), Gaps = 90/371 (24%)

Query: 149 VVTDGERILGLGDLGCNGMGIPV--GKLALYTACGGMNPQECLPVILDVGTENEELLKDP 206
           V++DG  +LGLGD+G     +PV  GK AL+ A  G++    +P++LD   + EE++   
Sbjct: 70  VISDGTAVLGLGDIGPEA-AMPVMEGKAALFKAFAGVD---AIPIVLDT-KDTEEII--- 121

Query: 207 LYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQYC-- 264
                                 ++A++  +G    I  ED +    F +  +   + C  
Sbjct: 122 --------------------SIVKALAPTFGG---INLEDISAPRCFEIEQRLIKE-CHI 157

Query: 265 -TFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKEGLP 323
             F+DD  GTA V +A +  +L++ K  L + +I+  G G A L I   ++ A       
Sbjct: 158 PVFHDDQHGTAIVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA------- 210

Query: 324 KEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHEEMKNLEAIVQEIKPTAL------- 376
                 K+ +VD  G+I +      QE  + A  H ++  +    +E K   L       
Sbjct: 211 ---GATKVTVVDKFGIINE------QEAAQLAPHHLDIAKVTN--REFKSGTLEDALEGA 259

Query: 377 ---IGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKA---ECSAEQCYKITKGRAIF 430
              IGV+A G   +E I K MAA   RP+IFA++NP  +    E      Y +  GR+ F
Sbjct: 260 DIFIGVSAPGVLKAEWISK-MAA---RPVIFAMANPIPEIYPDEALEAGAYIVGTGRSDF 315

Query: 431 ASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVS 490
                             P Q NN   FPG+  G +    + IT  + +  A+ IA  V 
Sbjct: 316 ------------------PNQINNVLAFPGIFRGALDARAKTITVEMQIAAAKGIASLVP 357

Query: 491 DKHLEEGRLYP 501
           D  L    + P
Sbjct: 358 DDALSTTNIIP 368


>2HAE-A nrPDB
          Length = 386

 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 150/346 (43%), Gaps = 66/346 (19%)

Query: 149 VVTDGERILGLGDLGCNGMGIPV--GKLALYTACGGMNPQECLPVILDVGTENEELLKDP 206
           VV+DG  +LGLG++G  G  +PV  GK  L+ A   ++     P+ L   +E+EE     
Sbjct: 64  VVSDGSAVLGLGNIGPYG-ALPVMEGKAFLFKAFADID---AFPICL---SESEE----- 111

Query: 207 LYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQYC-- 264
                           + +   ++++   +G    I  ED      FR+L +   +    
Sbjct: 112 ----------------EKIISIVKSLEPSFGG---INLEDIGAPKCFRILQRLSEEMNIP 152

Query: 265 TFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKEGLPK 324
            F+DD QGTA V  A  L AL++T+ K+ +  ++  G G A   I   ++          
Sbjct: 153 VFHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLL---------- 202

Query: 325 EKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHEEMKNLEAIVQEIKPTALIGVAAIGG 384
           +  +K +  VD KG++ +          ++  E   + N E +  +++ TAL G     G
Sbjct: 203 DLGVKNVVAVDRKGILNENDPETCL--NEYHLEIARITNPERLSGDLE-TALEGADFFIG 259

Query: 385 AFSEQILKD--MAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAIFASGSPFDPVTLP 442
                ILK   +   + +P+IFAL+NP  + +    +      G  I A+          
Sbjct: 260 VSRGNILKPEWIKKMSRKPVIFALANPVPEIDPELAR----EAGAFIVAT---------- 305

Query: 443 NGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQ 488
            G++ +P Q NN   FPG+  G V     +IT N+ L+  E IA+ 
Sbjct: 306 -GRSDHPNQVNNLLAFPGIMKGAVE-KRSKITKNMLLSAVEAIARS 349


>3MM1-A nrPDB
          Length = 442

 Score = 30.8 bits (68), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 32/137 (23%)

Query: 118 RKPRGLFITIHDRGHIASVLNAW-PEDVIKA-IVVTDGERI------LGLGDLGCNGMGI 169
           +K R +F  ++D     + L  + PE +  A I+++D  +       LG  + G   +GI
Sbjct: 22  QKERFVFFQVNDATSFKTALKTYVPERITSAAILISDPSQQPLAFVNLGFSNTGLQALGI 81

Query: 170 ---------PVGKLALYTACGGMNPQECLPVILDVGTENEELLKDPLYIGLRQRRVRGSE 220
                    P G+ A     G    Q   P     GT    +             + GS+
Sbjct: 82  TDDLGDAQFPDGQFADAANLGDDLSQWVAPF---TGTTIHGVF------------LIGSD 126

Query: 221 YDDFLDEFMEAVSSKYG 237
            DDFLD+F + +SS +G
Sbjct: 127 QDDFLDQFTDDISSTFG 143


>1CT9-A nrPDB
          Length = 553

 Score = 30.8 bits (68), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 15/26 (57%), Positives = 16/26 (61%)

Query: 480 TTAEVIAQQVSDKHLEEGRLYPPLNT 505
           T  EV AQQVSD+ LE  R   P NT
Sbjct: 463 TLKEVAAQQVSDQQLETARFRFPYNT 488


>6CZM-A nrPDB
          Length = 352

 Score = 30.0 bits (66), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 10/115 (8%)

Query: 301 GAGEAA--LGIAHLIVMALEKEGLPKEKAIKKI---WLVDSKGLIVKGRASLTQEKEKFA 355
           GA EAA  +GIA  I+  +      KE  +K+I    +++S+  +V  R S+   K    
Sbjct: 175 GALEAAPAMGIADAILDLVSSGTTLKENNLKEIEGGTVLESQAALVASRRSMIGRKGVLE 234

Query: 356 HEHEEMKNLEAIVQEIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPT 410
             HE ++ LEA ++ +    +  VA + G+ +E++ + + +   +P +  L  PT
Sbjct: 235 TTHEMLERLEAHLRAMGQFTV--VANMRGSSAEEVAERVLS---QPSLAGLQGPT 284


>4U3Q-A nrPDB
          Length = 122

 Score = 29.6 bits (65), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 7/66 (10%)

Query: 294 DQTILFQGAGEAALGIAHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEK 353
           D T+ F      A G A  + +ALEK+  P     +  W+V   G++    + ++ E+ K
Sbjct: 30  DTTVTFN-----ADGTAQKVELALEKKSAPSPLTYRGTWMVREDGIV--ELSLVSSEQSK 82

Query: 354 FAHEHE 359
             HE E
Sbjct: 83  APHEKE 88


>4X2Q-A nrPDB
          Length = 504

 Score = 29.3 bits (64), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 12/132 (9%)

Query: 433 GSPFDPVTLPNGQTLYPGQGNN--SYVFPGVALGV-VACGLRQITDNIFLTTAEVIAQQV 489
           GSPFDP T   G  +   Q N     +  GVA G  + CG + +    F     V +   
Sbjct: 336 GSPFDPTT-EQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVT 394

Query: 490 SDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEK---TATVYPEPQNKEAFVRSQMYS 546
            D  + +  ++ P+  I  +  K  +++++ A        A V+    NK   V S M +
Sbjct: 395 DDMRIAKEEIFGPVQEI--LRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQA 452

Query: 547 TDYDQILPDCYS 558
                +  +CY+
Sbjct: 453 ---GTVWINCYN 461


>5EVM-A nrPDB
          Length = 529

 Score = 29.3 bits (64), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 10/71 (14%)

Query: 404 FALSNPTSKAECSAEQCYKITKGRAIFASGSP----FDPVTLPNGQ------TLYPGQGN 453
           FALSN    A C +  C   T GRAI  SG       D  T P         +L    G+
Sbjct: 376 FALSNGVLFANCISVTCQCQTTGRAISQSGEQTLLMIDNTTCPTAVLGNVIISLGKYLGS 435

Query: 454 NSYVFPGVALG 464
            +Y   G+A+G
Sbjct: 436 VNYNSEGIAIG 446



 Score = 28.5 bits (62), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 14/31 (45%), Positives = 19/31 (61%)

Query: 32  LEERQQLNIHGLLPPSFNSQEIQVLRVVKNF 62
           L E QQ  I  LLP SFN+ + + + +V NF
Sbjct: 285 LTEIQQAYIQELLPVSFNNDDSEWISIVPNF 315


>1ZC0-A nrPDB
          Length = 309

 Score = 28.9 bits (63), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 479 LTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEA 538
           LT   +  Q  S K LEE  L  P N +    L I     KD Y+    T+ P PQ++  
Sbjct: 31  LTRWALQRQPPSPKQLEEEFLKIPSNFVSPEDLDIPGHASKDRYK----TILPNPQSRVC 86

Query: 539 FVRSQ 543
             R+Q
Sbjct: 87  LGRAQ 91


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

2AW5-A nrPDB                                                          897   0.0  
1GQ2-A nrPDB                                                          880   0.0  
1LLQ-A nrPDB                                                          815   0.0  
1PJL-A nrPDB                                                          815   0.0  
5OU5-A nrPDB                                                          784   0.0  
6C7N-A nrPDB                                                          769   0.0  
2DVM-A nrPDB                                                          351   6e-97
3NV9-A nrPDB                                                          325   3e-89
5CEE-A nrPDB                                                          323   1e-88
2A9F-A nrPDB                                                          298   4e-81
2HAE-A nrPDB                                                          296   2e-80

Sequences not found previously or not previously below threshold:

1GTM-A nrPDB                                                           39   0.005
1EUZ-A nrPDB                                                           36   0.041
1EE8-A nrPDB                                                           34   0.26 
2HK7-A nrPDB                                                           34   0.27 
1E19-A nrPDB                                                           33   0.33 
3OC4-A nrPDB                                                           33   0.41 
2VUN-A nrPDB                                                           32   0.67 
6EM8-A nrPDB                                                           32   0.68 
6EMW-E nrPDB                                                           31   1.2  
6MZB-A nrPDB                                                           31   1.3  
3TQO-A nrPDB                                                           31   1.4  
3DOO-A nrPDB                                                           31   1.5  
5E64-B nrPDB                                                           30   2.4  
3J3U-A nrPDB                                                           30   3.3  
1M9S-A nrPDB                                                           29   6.8  


CONVERGED!
>2AW5-A nrPDB
          Length = 575

 Score =  897 bits (2318), Expect = 0.0,   Method: Composition-based stats.
 Identities = 552/555 (99%), Positives = 553/555 (99%)

Query: 10  HTHQRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDF 69
            + QRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDF
Sbjct: 21  QSMQRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDF 80

Query: 70  DRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHD 129
           DRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHD
Sbjct: 81  DRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHD 140

Query: 130 RGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECL 189
           RGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECL
Sbjct: 141 RGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECL 200

Query: 190 PVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFAN 249
           PVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFAN
Sbjct: 201 PVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFAN 260

Query: 250 VNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGI 309
           VNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGI
Sbjct: 261 VNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGI 320

Query: 310 AHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHEEMKNLEAIVQ 369
           AHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHEEMKNLEAIVQ
Sbjct: 321 AHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHEEMKNLEAIVQ 380

Query: 370 EIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAI 429
           EIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAI
Sbjct: 381 EIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAI 440

Query: 430 FASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQV 489
           FASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQV
Sbjct: 441 FASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQV 500

Query: 490 SDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDY 549
           SDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDY
Sbjct: 501 SDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDY 560

Query: 550 DQILPDCYSWPEEVQ 564
           DQILPDCYSWPEEVQ
Sbjct: 561 DQILPDCYSWPEEVQ 575


>1GQ2-A nrPDB
          Length = 555

 Score =  880 bits (2273), Expect = 0.0,   Method: Composition-based stats.
 Identities = 434/555 (78%), Positives = 502/555 (90%)

Query: 13  QRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDFDRY 72
           ++GY + R+PHLNK +AFTLEERQQLNIHGLLPP F  Q+ QV  ++KNFE L SD DRY
Sbjct: 1   KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRY 60

Query: 73  LLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHDRGH 132
           +LLM LQDRNEKLFY+VLTSDIE+FMPIVYTPTVGLACQ Y L FR+PRGLFITIHDRGH
Sbjct: 61  ILLMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGH 120

Query: 133 IASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECLPVI 192
           IA++L +WPE VIKAIVVTDGERILGLGDLGC GMGIPVGKLALYTACGG+ P +CLPV+
Sbjct: 121 IATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGKLALYTACGGVKPHQCLPVM 180

Query: 193 LDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNA 252
           LDVGT+NE LLKDPLYIGLR +R+RG  YDD LDEFMEAV+S+YGMNCLIQFEDFAN NA
Sbjct: 181 LDVGTDNETLLKDPLYIGLRHKRIRGQAYDDLLDEFMEAVTSRYGMNCLIQFEDFANANA 240

Query: 253 FRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHL 312
           FRLL+KYRN+YCTFNDDIQGTASVAVAGLLAALRITKN+LSD T+LFQGAGEAALGIA+L
Sbjct: 241 FRLLHKYRNKYCTFNDDIQGTASVAVAGLLAALRITKNRLSDHTVLFQGAGEAALGIANL 300

Query: 313 IVMALEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHEEMKNLEAIVQEIK 372
           IVMA++KEG+ KE+AIK+IW+VDSKGLIVKGRASLT EKE FAHEH EMKNLE IV++IK
Sbjct: 301 IVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHCEMKNLEDIVKDIK 360

Query: 373 PTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAIFAS 432
           PT LIGVAAIGGAF++QIL+DMAAFN+RPIIFALSNPTSKAEC+AEQ YK T+GR IFAS
Sbjct: 361 PTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPTSKAECTAEQLYKYTEGRGIFAS 420

Query: 433 GSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDK 492
           GSPFDPVTLP+GQTLYPGQGNNSYVFPGVALGV++CGL+ I D++FLTTAEVIAQ+VS++
Sbjct: 421 GSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAEVIAQEVSEE 480

Query: 493 HLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDYDQI 552
           +L+EGRLYPPL TI+ VSLKIA +I K+AY+  TA+ YP+P++ EAF+RSQ+YSTDY+  
Sbjct: 481 NLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFIRSQVYSTDYNCF 540

Query: 553 LPDCYSWPEEVQKIQ 567
           + D Y+WPEE  K++
Sbjct: 541 VADSYTWPEEAMKVK 555


>1LLQ-A nrPDB
          Length = 605

 Score =  815 bits (2105), Expect = 0.0,   Method: Composition-based stats.
 Identities = 292/562 (51%), Positives = 399/562 (70%), Gaps = 3/562 (0%)

Query: 6   PRRRHTHQRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHL 65
           P R    +R   L + P LNK + F+L ERQ L +HGLLPP+F +QE Q  RV+      
Sbjct: 30  PERVTPKKRSAELLKEPRLNKGMGFSLYERQYLGLHGLLPPAFMTQEQQAYRVITKLREQ 89

Query: 66  NSDFDRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFI 125
            +D  RY+ L  LQDRNEKLFYRV+   +++ MPIVYTPTVGLACQ +  ++RKP+GL+I
Sbjct: 90  PNDLARYIQLDGLQDRNEKLFYRVVCDHVKELMPIVYTPTVGLACQNFGYIYRKPKGLYI 149

Query: 126 TIHDRG--HIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGM 183
           TI+D     I  +L+ W E+ ++AIVVTDGERILGLGDLG  G+GIPVGKLALY A GG+
Sbjct: 150 TINDNSVSKIYQILSNWHEEDVRAIVVTDGERILGLGDLGAYGIGIPVGKLALYVALGGV 209

Query: 184 NPQECLPVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQ 243
            P+ CLPV+LDVGT N +LL DP YIGLR +RVRG +YD  LD FM+A + KYG   LIQ
Sbjct: 210 QPKWCLPVLLDVGTNNMDLLNDPFYIGLRHKRVRGKDYDTLLDNFMKACTKKYGQKTLIQ 269

Query: 244 FEDFANVNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAG 303
           FEDFAN NAFRLL+KY+++Y  FNDDIQGTASV VAGLL   R+TK  +S +  LF GAG
Sbjct: 270 FEDFANPNAFRLLDKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAG 329

Query: 304 EAALGIAHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHEEMKN 363
            A+ GIA +IV  ++ EG+ KE+A  +I+L+D  GL+ K R  +     +FA +  E  +
Sbjct: 330 AASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQFAKDMPETTS 389

Query: 364 LEAIVQEIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKI 423
           +  +++  +P ALIG + + GAF+E++++ MA  NERPIIFALSNPTSKAEC+AE+ Y  
Sbjct: 390 ILEVIRAARPGALIGASTVRGAFNEEVIRAMAEINERPIIFALSNPTSKAECTAEEAYTF 449

Query: 424 TKGRAIFASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAE 483
           T G A++ASGSPF    L NG T  PGQGNN+Y+FPGVALG +   +R + +++FL  A+
Sbjct: 450 TNGAALYASGSPFPNFEL-NGHTYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAK 508

Query: 484 VIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQ 543
            +A  V++  L+ GR+YP L  IR++S++IA ++ K  Y+  TA +YP+P++ E +VR+Q
Sbjct: 509 KVASCVTEDSLKVGRVYPQLKEIREISIQIAVEMAKYCYKNGTANLYPQPEDLEKYVRAQ 568

Query: 544 MYSTDYDQILPDCYSWPEEVQK 565
           +Y+T+Y++++   Y WPE+  +
Sbjct: 569 VYNTEYEELINATYDWPEQDMR 590


>1PJL-A nrPDB
          Length = 584

 Score =  815 bits (2104), Expect = 0.0,   Method: Composition-based stats.
 Identities = 311/562 (55%), Positives = 411/562 (73%), Gaps = 3/562 (0%)

Query: 5   APRRRHTHQRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEH 64
           A R  H  ++G  L  NP  NK +AFTL+ERQ L + GLLPP   +Q+IQ LR  +N + 
Sbjct: 15  ACRHLHIKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKK 74

Query: 65  LNSDFDRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLF 124
           + S  ++Y+ +M +Q+RNEKLFYR+L  DIE  MPIVYTPTVGLAC QY  +FR+P+GLF
Sbjct: 75  MTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFRRPKGLF 134

Query: 125 ITIHDRGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMN 184
           I+I DRGH+ S+++ WPE+ +KA+VVTDGERILGLGDLG  GMGIPVGKL LYTAC G+ 
Sbjct: 135 ISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIR 194

Query: 185 PQECLPVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQF 244
           P  CLPV +DVGT+N  LLKDP Y+GL Q+R R  +YDD +DEFM+A++ +YG N LIQF
Sbjct: 195 PDRCLPVCIDVGTDNIALLKDPFYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQF 254

Query: 245 EDFANVNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGE 304
           EDF N NAFR L KYR +YCTFNDDIQGTA+VA+AGLLAA ++    +S+  ILF GAGE
Sbjct: 255 EDFGNHNAFRFLRKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGE 314

Query: 305 AALGIAHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGR-ASLTQEKEKFAHEHEEM-- 361
           AALGIA+LIVM++ + GL +++A KKIW+ D  GL+VKGR A +   +E F H   E   
Sbjct: 315 AALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIP 374

Query: 362 KNLEAIVQEIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCY 421
              E  V  +KP+ +IGVA  G  F+  +++ MA+ NERP+IFALSNPT++AEC+AE+ Y
Sbjct: 375 DTFEDAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAY 434

Query: 422 KITKGRAIFASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTT 481
            +T+GR +FASGSPF PV L +G+   PGQGNN Y+FPGVAL V+ C  R I+D++FL  
Sbjct: 435 TLTEGRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEA 494

Query: 482 AEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVR 541
           A+ +  Q++D+ L +GRLYPPL  I++VS+ IA K+ +  Y  K A  YPEP++K  +V+
Sbjct: 495 AKALTSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYVK 554

Query: 542 SQMYSTDYDQILPDCYSWPEEV 563
            + + ++YD +LPD Y WPE  
Sbjct: 555 ERTWRSEYDSLLPDVYEWPESA 576


>5OU5-A nrPDB
          Length = 576

 Score =  784 bits (2024), Expect = 0.0,   Method: Composition-based stats.
 Identities = 276/542 (50%), Positives = 372/542 (68%), Gaps = 3/542 (0%)

Query: 10  HTHQRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDF 69
            +   GY L R+PH NK LAFT EER    + GLLPP+  SQE+Q+ + +       +  
Sbjct: 32  TSVASGYTLLRDPHHNKGLAFTEEERDGHYLRGLLPPAVLSQELQIKKFMNTLRQYQTPL 91

Query: 70  DRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHD 129
            RY+ +M+LQ+ +E+LFY++L  ++ + +P VYTPTVG ACQ+Y  +F +P+GL++++ D
Sbjct: 92  QRYIAMMNLQETDERLFYKLLIDNVVELLPFVYTPTVGEACQKYGSIFGRPQGLYVSLKD 151

Query: 130 RGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECL 189
           +G +  VL  WP   I+ I VTDGERILGLGDLGC GMGIPVGKLALYTA GG++P  CL
Sbjct: 152 KGKVLEVLRNWPHRNIQVICVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVDPSVCL 211

Query: 190 PVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFAN 249
           P+ +DVGT NE+LL D  YIGLRQ+R  G EYD+ ++EFM AV   YG   LIQFEDFAN
Sbjct: 212 PITIDVGTNNEKLLNDEFYIGLRQKRATGEEYDELIEEFMSAVKQFYGEKVLIQFEDFAN 271

Query: 250 VNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGI 309
            NAF LL KY   +  FNDDIQGTASV +AGLLAAL++    L++QT LF GAGEA  GI
Sbjct: 272 HNAFDLLEKYSKSHLVFNDDIQGTASVVLAGLLAALKMVGGTLAEQTYLFLGAGEAGTGI 331

Query: 310 AHLIVMALEKE-GLPKEKAIKKIWLVDSKGLIVKGRA-SLTQEKEKFAHEHEEMKNLEAI 367
           A LI + + K+   P E+  KK+WLVDSKGLIV  R  SL   K+ +AHEHE +K L   
Sbjct: 332 AELIALEISKQTNAPIEECRKKVWLVDSKGLIVDSRKGSLQPFKKPWAHEHEPLKTLYDA 391

Query: 368 VQEIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGR 427
           VQ IKPT LIG + +G  F+++I++ M++FNERPIIF+LSNPTS +EC+AEQ Y  ++GR
Sbjct: 392 VQSIKPTVLIGTSGVGRTFTKEIIEAMSSFNERPIIFSLSNPTSHSECTAEQAYTWSQGR 451

Query: 428 AIFASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQ 487
           +IFASGSPF PV    G+T  PGQ NN+Y+FPG+ LG+V  G  ++ +++ L  ++ +A 
Sbjct: 452 SIFASGSPFAPVEY-EGKTFVPGQSNNAYIFPGLGLGLVISGAVRVHEDMLLAASKALAD 510

Query: 488 QVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYST 547
           Q +  + E+G ++PP  +IR +S  IA  +   AY+   AT  P P +   +  + MY+ 
Sbjct: 511 QATQDNFEKGSIFPPFTSIRKISAHIAAAVAAKAYELGLATRLPPPSDLVKYAENCMYTP 570

Query: 548 DY 549
            Y
Sbjct: 571 VY 572


>6C7N-A nrPDB
          Length = 613

 Score =  769 bits (1985), Expect = 0.0,   Method: Composition-based stats.
 Identities = 276/542 (50%), Positives = 371/542 (68%), Gaps = 3/542 (0%)

Query: 10  HTHQRGYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDF 69
            +   GY L R+P  NK LAFT  ER    + GLLPP+  SQE+Q+ + + N        
Sbjct: 69  TSVASGYTLLRDPRHNKGLAFTERERDAHYLRGLLPPAVVSQELQIKKFMNNLRQYQLPI 128

Query: 70  DRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHD 129
             Y+ +M+LQ+ +E+LFY++L  ++ + +P VYTPTVG ACQ+Y  +F +P+GL++++ D
Sbjct: 129 QCYMAMMNLQETDERLFYKLLIENVVELLPYVYTPTVGEACQKYGSIFGRPQGLYVSLKD 188

Query: 130 RGHIASVLNAWPEDVIKAIVVTDGERILGLGDLGCNGMGIPVGKLALYTACGGMNPQECL 189
           +G +  VL  WP   ++ I VTDGERILGLGDLGC GMGIPVGKLALYTA GG++P  CL
Sbjct: 189 KGRVLEVLRNWPHRNVQVICVTDGERILGLGDLGCQGMGIPVGKLALYTALGGVDPSACL 248

Query: 190 PVILDVGTENEELLKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFAN 249
           P+ +DVGT NE+LL D  YIGLRQ+R RG EYD+ ++EFM AV + YG   LIQFEDFAN
Sbjct: 249 PITIDVGTNNEKLLNDEFYIGLRQKRARGEEYDELMEEFMAAVKTFYGEKVLIQFEDFAN 308

Query: 250 VNAFRLLNKYRNQYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGI 309
            NAF LL KY   +  FNDDIQGTASV +AGLLAAL++    L++QT LF GAGEA  GI
Sbjct: 309 HNAFDLLEKYSKTHLVFNDDIQGTASVVLAGLLAALKMVGGTLAEQTYLFLGAGEAGTGI 368

Query: 310 AHLIVMALEKEG-LPKEKAIKKIWLVDSKGLIVKGR-ASLTQEKEKFAHEHEEMKNLEAI 367
           A LI + + K+   P E+  KK+WLVDSKGLIV  R +SL   K+ +AHEHE +  L   
Sbjct: 369 AELIALEMSKQTKAPIEECRKKVWLVDSKGLIVDSRKSSLAPFKKPWAHEHEPLTTLYDA 428

Query: 368 VQEIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGR 427
           VQ IKPT LIG + +G  F+++I++ MA+ NERPIIF+LSNPTS +EC+AEQ Y  T+GR
Sbjct: 429 VQSIKPTVLIGTSGVGRTFTKEIVEAMASINERPIIFSLSNPTSHSECTAEQAYTWTQGR 488

Query: 428 AIFASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQ 487
           A+FASGSPF PV   +G+T  PGQ NN+Y+FPG+ LG+V  G  ++ +++ L  +  +A 
Sbjct: 489 AVFASGSPFAPVEY-DGKTFVPGQSNNAYIFPGLGLGLVISGAVRVHEDMLLAASAALAD 547

Query: 488 QVSDKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYST 547
           Q ++++   G ++PP   IR +S  IA  +   AY+   AT  P P++  A+  S MYS 
Sbjct: 548 QATEENFVTGSIFPPFTNIRKISAYIAAAVAAKAYELGLATRLPPPKDLVAYAESCMYSP 607

Query: 548 DY 549
            Y
Sbjct: 608 VY 609


>2DVM-A nrPDB
          Length = 439

 Score =  351 bits (900), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 120/440 (27%), Positives = 195/440 (44%), Gaps = 81/440 (18%)

Query: 96  KFMPIVYTPTVGLACQQYSLVFRKPRGLFITIHDRGHIASVLNAWPEDVIKAIVVTDGER 155
           + + + YTP V   C++   + R P G       +G++ +             VV+DG R
Sbjct: 32  EELTLAYTPGVAEPCKE---IARDP-GKVYEYTSKGNLVA-------------VVSDGSR 74

Query: 156 ILGLGDLGC-NGMGIPVGKLALYTACGGMNPQECLPVILDVGTENEELLKDPLYIGLRQR 214
           ILGLG++G   G+ +  GK  L+   GG++     P+++                     
Sbjct: 75  ILGLGNIGPLAGLPVMEGKALLFKRFGGVD---AFPIMI--------------------- 110

Query: 215 RVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQY--CTFNDDIQG 272
             +  E + F+D  ++A++  +G    I  ED A+   F +L + R +     F+DD QG
Sbjct: 111 --KEQEPNKFID-IVKAIAPTFGG---INLEDIASPKCFYILERLREELDIPVFHDDQQG 164

Query: 273 TASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKEGLPKEKAIKKIW 332
           TA+V +AGLL AL++   K+S+ T+   GAG A      ++      E   K + ++ + 
Sbjct: 165 TAAVVLAGLLNALKVVGKKISEITLALFGAGAAGFATLRIL-----TEAGVKPENVRVVE 219

Query: 333 LVDSKGLIVKGRASLTQ--EKEKFAHEHEEMKNLEAIVQEIKPTA--LIGVAAIG-GAFS 387
           LV+ K  I+     L +      +  +    +N+E   QE    A  LI     G G   
Sbjct: 220 LVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEALKDADVLISFTRPGPGVIK 279

Query: 388 EQILKDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAIFASGSPFDPVTLPNGQTL 447
            Q ++ M   NE  I+F L+NP    E   E+  K   G  I A+           G++ 
Sbjct: 280 PQWIEKM---NEDAIVFPLANPVP--EILPEEAKK--AGARIVAT-----------GRSD 321

Query: 448 YPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIR 507
           YP Q NN   FPG+  G +    R ITD++ +  A+ IA  V +   EE  +  PLN I 
Sbjct: 322 YPNQINNLLGFPGIFRGALDVRARTITDSMIIAAAKAIASIVEEPS-EENIIPSPLNPI- 379

Query: 508 DVSLKIAEKIVKDAYQEKTA 527
            V  + A  + ++A +E  A
Sbjct: 380 -VYAREARAVAEEAMKEGVA 398


>3NV9-A nrPDB
          Length = 487

 Score =  325 bits (833), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 125/497 (25%), Positives = 204/497 (41%), Gaps = 82/497 (16%)

Query: 86  FYRVLTSDIEKFMP--IVYTPTVGLACQQYSLVFRKPRGLFITIHDRGHIASVLNAWPED 143
           FY+ L   + KF    I   P   LA   +   +  P    I+ + R +  S L  +   
Sbjct: 31  FYKELAEKVHKFYKGKIQIMPKCTLAGFNWFNAYYTPGVSRISTNIRDNNDSSL-FYSLR 89

Query: 144 VIKAIVVTDGERILGLGDLGC-NGMGIPVGKLALYTACGGMNPQECLPVILDVGTENEEL 202
                VV+D  R+LG GD+    G+G+  GK  L    GG++    +P+ +D  ++N+E 
Sbjct: 90  GNFVGVVSDSTRVLGDGDVTPPGGLGVMEGKALLMKYLGGID---AVPICID--SKNKEG 144

Query: 203 LKDPLYIGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRN- 261
             DP                D + EF++ +   +G    I  ED +  N +++L+  R  
Sbjct: 145 KNDP----------------DAVIEFVQRIQHTFGA---INLEDISQPNCYKILDVLRES 185

Query: 262 -QYCTFNDDIQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKE 320
                ++DD QGTASV +AGLL AL++ K  + +  ++F GAG +      LIV A    
Sbjct: 186 CDIPVWHDDQQGTASVTLAGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVTAGADP 245

Query: 321 GLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHE--EMKN---LEAIVQE-IKPT 374
                   KKI + DSKG +  GR  + ++  +F  + E  E  N     +I +  +   
Sbjct: 246 --------KKIVMFDSKGSLHNGREDIKKDT-RFYRKWEICETTNPSKFGSIAEACVGAD 296

Query: 375 ALIGVAAIG-GAFSEQILKDMAAFNERPIIFALSNPTSKA---ECSAEQCYKITKGRAIF 430
            LI ++  G G    + +K M    E+PI+F  +NP  +    E      Y +  GR  F
Sbjct: 297 VLISLSTPGPGVVKAEWIKSMG---EKPIVFCCANPVPEIYPYEAKEAGAYIVATGRGDF 353

Query: 431 ASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVS 490
                             P Q NNS  FPG+  G +    R+ITDN+ +  +  +A+   
Sbjct: 354 ------------------PNQVNNSVGFPGILKGALIVRARKITDNMAIAASRALAEFAE 395

Query: 491 DKHLEEGRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYSTDYD 550
            + +    +   ++    +  K A  +   A ++  A            V    +   YD
Sbjct: 396 KRGINPDNIIGTMDE-PGIFPKEAADVAMQAIKDGVAR-----------VTDLTWQQVYD 443

Query: 551 QILPDCYSWPEEVQKIQ 567
               D     E  Q +Q
Sbjct: 444 IAEHDIKEARESAQLLQ 460


>5CEE-A nrPDB
          Length = 413

 Score =  323 bits (828), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 100/435 (22%), Positives = 186/435 (42%), Gaps = 85/435 (19%)

Query: 98  MPIVYTPTVGLACQQYSLVFRKPRGLFITIHDRGHIASVLNAWPEDVIKAIVVTDGERIL 157
           + +VYTP V   C +   +   P  ++     +G++               V+T+G  +L
Sbjct: 55  LSLVYTPGVAEPCLK---IKENPSDVY-RYTMKGNMVG-------------VITNGTAVL 97

Query: 158 GLGDLGCNG-MGIPVGKLALYTACGGMNPQECLPVILDVGTENEELLKDPLYIGLRQRRV 216
           GLG++G    + +  GK  L+    G++     P+ +D  T+++E++             
Sbjct: 98  GLGNIGPKASLPVMEGKAILFKELAGID---SFPICID-STDSQEIVN------------ 141

Query: 217 RGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLN--KYRNQYCTFNDDIQGTA 274
                       +  +S+ +G    I  ED  +     + +  K +     F+DD  GTA
Sbjct: 142 -----------IVSKISTVFGA---INLEDIKSPQCIEIEDALKAKLDIPVFHDDQHGTA 187

Query: 275 SVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKEGLPKEKAIKKIWLV 334
            V  AG+L AL++ K  + D  ++  GAG A + IA ++++            +  + LV
Sbjct: 188 IVVAAGILNALKVVKKSIEDVQVVINGAGSAGMAIAKMLLL----------LKVNNVVLV 237

Query: 335 DSKGLIVKGRASLTQEKEKF---AHEHEEMKNLEAIVQEIKPTALIGVAAIGGAFSEQIL 391
           D  G + KG A+L + ++K     ++++E   L+ +++       IGV+A G   +E + 
Sbjct: 238 DKTGTLYKGVANLNEPQKKLVEVTNKYQEKGTLKEVLK--GKDIFIGVSAPGIVTAEMV- 294

Query: 392 KDMAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAIFASGSPFDPVTLPNGQTLYPGQ 451
              A   +  I+FAL+NP    E   ++  K   G  I A+           G++ +P Q
Sbjct: 295 ---ATMAKDAIVFALANPVP--EIMPDEAKK--GGARIVAT-----------GRSDFPNQ 336

Query: 452 GNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSL 511
            NN   FPGV  G +     QIT+ +       +   + ++ L E  + P     ++V  
Sbjct: 337 VNNCLAFPGVFRGTLDAKATQITEEMKKAATYALKNIIKEQDLNENNILPTSFN-KEVVK 395

Query: 512 KIAEKIVKDAYQEKT 526
           +IA  + K A +   
Sbjct: 396 QIALAVCKVAKETGV 410


>2A9F-A nrPDB
          Length = 398

 Score =  298 bits (763), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 99/414 (23%), Positives = 163/414 (39%), Gaps = 91/414 (21%)

Query: 98  MPIVYTPTVGLACQQYSLVFRKPRGLFITIHDRGHIASVLNAWPEDVIKAIVVTDGERIL 157
           + I YTP V       S    K + L   +  + +  +             V++DG  +L
Sbjct: 36  LSIAYTPGVA----SVSSAIAKDKTLAYDLTTKKNTVA-------------VISDGTAVL 78

Query: 158 GLGDLGCNG-MGIPVGKLALYTACGGMNPQECLPVILDVGTENEELLKDPLYIGLRQRRV 216
           GLGD+G    M +  GK AL+ A  G++    +P++LD   + EE               
Sbjct: 79  GLGDIGPEAAMPVMEGKAALFKAFAGVD---AIPIVLDT-KDTEE--------------- 119

Query: 217 RGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQ--YCTFNDDIQGTA 274
                   +   ++A++  +G    I  ED +    F +  +   +     F+DD  GTA
Sbjct: 120 --------IISIVKALAPTFGG---INLEDISAPRCFEIEQRLIKECHIPVFHDDQHGTA 168

Query: 275 SVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKEGLPKEKAIKKIWLV 334
            V +A +  +L++ K  L + +I+  G G A L I   ++ A             K+ +V
Sbjct: 169 IVVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAA----------GATKVTVV 218

Query: 335 DSKGLIVKGRASLTQEK----EKFAHEHEEMKNLEAIVQEIKPTALIGVAAIGGAFSEQI 390
           D  G+I +  A+          K  +   +   LE  ++       IGV+A G     + 
Sbjct: 219 DKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALE--GADIFIGVSAPG-VLKAEW 275

Query: 391 LKDMAAFNERPIIFALSNPTSKA---ECSAEQCYKITKGRAIFASGSPFDPVTLPNGQTL 447
           +  MAA   RP+IFA++NP  +    E      Y +  GR+ F                 
Sbjct: 276 ISKMAA---RPVIFAMANPIPEIYPDEALEAGAYIVGTGRSDF----------------- 315

Query: 448 YPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRLYP 501
            P Q NN   FPG+  G +    + IT  + +  A+ IA  V D  L    + P
Sbjct: 316 -PNQINNVLAFPGIFRGALDARAKTITVEMQIAAAKGIASLVPDDALSTTNIIP 368


>2HAE-A nrPDB
          Length = 386

 Score =  296 bits (758), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 97/415 (23%), Positives = 169/415 (40%), Gaps = 92/415 (22%)

Query: 96  KFMPIVYTPTVGL---ACQQYSLVFRKPRGLFITIHDRGHIASVLNAWPEDVIKAIVVTD 152
           + + ++YTP V     AC +       P   ++    R +  +             VV+D
Sbjct: 28  ETLSLLYTPGVADVARACAE------DPEKTYV-YTSRWNTVA-------------VVSD 67

Query: 153 GERILGLGDLGCNG-MGIPVGKLALYTACGGMNPQECLPVILDVGTENEELLKDPLYIGL 211
           G  +LGLG++G  G + +  GK  L+ A   ++     P+ L   +E+EE          
Sbjct: 68  GSAVLGLGNIGPYGALPVMEGKAFLFKAFADID---AFPICL---SESEE---------- 111

Query: 212 RQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQY--CTFNDD 269
                      + +   ++++   +G    I  ED      FR+L +   +     F+DD
Sbjct: 112 -----------EKIISIVKSLEPSFGG---INLEDIGAPKCFRILQRLSEEMNIPVFHDD 157

Query: 270 IQGTASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKEGLPKEKAIK 329
            QGTA V  A  L AL++T+ K+ +  ++  G G A   I   ++          +  +K
Sbjct: 158 QQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLL----------DLGVK 207

Query: 330 KIWLVDSKGLIVKGRASLTQEKEKFAHEHEEMKNLEAIVQEIKPTALIGVAAIGGAFSEQ 389
            +  VD KG++ +          ++  E   + N E +  +++ TAL G     G     
Sbjct: 208 NVVAVDRKGILNENDPETCL--NEYHLEIARITNPERLSGDLE-TALEGADFFIGVSRGN 264

Query: 390 ILKD--MAAFNERPIIFALSNPTSKAECSAEQCYKITKGRAIFASGSPFDPVTLPNGQTL 447
           ILK   +   + +P+IFAL+NP  + +    +      G  I A+           G++ 
Sbjct: 265 ILKPEWIKKMSRKPVIFALANPVPEIDPELAR----EAGAFIVAT-----------GRSD 309

Query: 448 YPGQGNNSYVFPGVALGVVACGLRQITDNIFLTTAEVIA-QQVSDKHLEEGRLYP 501
           +P Q NN   FPG+  G V     +IT N+ L+  E IA     +      R+ P
Sbjct: 310 HPNQVNNLLAFPGIMKGAVE-KRSKITKNMLLSAVEAIARSCEPEPE----RIIP 359


>1GTM-A nrPDB
          Length = 419

 Score = 39.4 bits (90), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 14/150 (9%)

Query: 270 IQGTASVAVAGLLAALRITK-NKLSDQTILFQGAGEAALGIAHLIVMALEKEGLPKEKAI 328
           I+ TA  A   +  A ++   + L  +TI  QG G A   +A ++          ++  +
Sbjct: 187 IEATARGASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIM---------SEDFGM 237

Query: 329 KKIWLVDSKGLIVKGRASLTQEKEKFAHEHEEMKNLEAIVQEIKPTAL-IGVAAIGGAFS 387
           K + + DSKG I         E  K+ +EH  +K+            L + V  +  A  
Sbjct: 238 KVVAVSDSKGGIYNPDGLNADEVLKWKNEHGSVKDFPGATNITNEELLELEVDVLAPAAI 297

Query: 388 EQILKDMAAFNERPIIFA-LSN-P-TSKAE 414
           E+++    A N +  I A ++N P T +A+
Sbjct: 298 EEVITKKNADNIKAKIVAEVANGPVTPEAD 327


>1EUZ-A nrPDB
          Length = 419

 Score = 36.3 bits (82), Expect = 0.041,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 13/146 (8%)

Query: 273 TASVAVAGLLAALRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKEGLPKEKAIKKIW 332
           TA  A+  +  A +     L  + I  QG G A    A L           ++  +  + 
Sbjct: 191 TAQGAIFTIREAAKALGIDLKGKKIAVQGYGNAGYYTAKL---------AKEQLGMTVVA 241

Query: 333 LVDSKGLIVKGRASLTQEKEKFAHEHEEMKNLEAIVQEIKPTAL-IGVAAIGGAFSEQIL 391
           + DS+G I         E  K+  EH  +K+            L + V  +  A  E+++
Sbjct: 242 VSDSRGGIYNPDGLDPDEVLKWKREHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVI 301

Query: 392 KDMAAFNERPIIFA-LSN-P-TSKAE 414
            +  A N +  I A ++N P T +A+
Sbjct: 302 TEKNADNIKAKIVAEVANGPVTPEAD 327


>1EE8-A nrPDB
          Length = 266

 Score = 33.6 bits (75), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 50/151 (33%), Gaps = 31/151 (20%)

Query: 409 PTSKAECSAEQCYKITKGRAIFASGSPFDPVTLPNGQTLY----------PGQGNNSYVF 458
           PT        +   + +GR ++              +  Y          P   + ++ F
Sbjct: 78  PTPHT-----RAALVLEGRTLYFHDPRRFGRLFGVRRGDYREIPLLLRLGPEPLSEAFAF 132

Query: 459 PGVALGVVACG--LRQITDNIFLTTAEVIAQQVSDKHLEEGRLYPPLNTIRDVSLKIAEK 516
           PG   G+      L+ +  +  L     +    +D+ L   RL  P    R ++ + A +
Sbjct: 133 PGFFRGLKESARPLKALLLDQRLAA--GVGNIYADEALFRARL-SPFRPARSLTEEEARR 189

Query: 517 -------IVKDAYQEKTATV----YPEPQNK 536
                  ++ +A +   +T+    Y +P   
Sbjct: 190 LYRALREVLAEAVELGGSTLSDQSYRQPDGL 220


>2HK7-A nrPDB
          Length = 269

 Score = 33.6 bits (75), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 31/74 (41%)

Query: 280 GLLAALRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKEGLPKEKAIKKIWLVDSKGL 339
           G L +L+    ++ +++IL  GAG A+  + + +V    K  L      K I L     L
Sbjct: 109 GFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPL 168

Query: 340 IVKGRASLTQEKEK 353
            V        +K +
Sbjct: 169 EVVNSPEEVIDKVQ 182


>1E19-A nrPDB
          Length = 314

 Score = 33.2 bits (74), Expect = 0.33,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 55/145 (37%), Gaps = 21/145 (14%)

Query: 302 AGEAALGIAHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEHEEM 361
           AG  + G    ++    K  L K    KK+  + ++ ++ K   +     +     ++E 
Sbjct: 81  AGAMSQGWIGYMIQQALKNELRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDE- 139

Query: 362 KNLEAIVQEIKPTALIGVAAIGGAFSEQILKDMAAFNERPIIFALSNPTSKAECSAEQCY 421
           +  + + +E                   I+K+ +    R ++    +P  K    AE   
Sbjct: 140 ETAKRLARE----------------KGWIVKEDSGRGWRRVV---PSPDPKGHVEAETIK 180

Query: 422 K-ITKGRAIFASGSPFDPVTLPNGQ 445
           K + +G  + ASG    PV L +G+
Sbjct: 181 KLVERGVIVIASGGGGVPVILEDGE 205


>3OC4-A nrPDB
          Length = 452

 Score = 32.8 bits (73), Expect = 0.41,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 85/222 (38%), Gaps = 16/222 (7%)

Query: 278 VAGLLAALRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKEGLPKEKAIKKIWLVDSK 337
           ++G LAA+ + +N    QT+   GAG   +     +V  ++K     E     +     K
Sbjct: 134 LSGALAAVPLLENS---QTVAVIGAGPIGMEAIDFLV-KMKKTVHVFESLENLLPKYFDK 189

Query: 338 GLIVKGRASLTQEKEKFAHEHEEMKNLEAIVQEIKPTALIGVAAIGGAFSEQILKDMAAF 397
            ++ + + SL ++   F  E   +   E     +  T+   ++   G F+  +   +A  
Sbjct: 190 EMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQEISCDSGIFALNLHPQLAYL 249

Query: 398 NERPIIFALSNPTSKAECSAEQCYKITKGRAIFASGSPFDPVTLPNGQTLYPGQGNNSYV 457
           +++ I   L       +  A   Y  T    +FA G     +  P  +T Y    NN+  
Sbjct: 250 DKK-IQRNLD------QTIAVDAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNA-- 300

Query: 458 FPGVALGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRL 499
              V  G+V     +   + F+ +   +  +V D +L    L
Sbjct: 301 ---VRTGLVVANNLEEKTHRFIGSLRTMGTKVGDYYLASTGL 339


>2VUN-A nrPDB
          Length = 386

 Score = 32.1 bits (71), Expect = 0.67,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 47/149 (31%), Gaps = 17/149 (11%)

Query: 312 LIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGRASLTQEKEKFAHEH------------- 358
           +I+     E    E   + +W+V   GL             ++AH+H             
Sbjct: 140 VILEKGLTEEDFIEMKKEGVWIVGEVGLGTIKNPEDAAPMVEWAHKHGFKVQMHTGGTSI 199

Query: 359 --EEMKNLEAIVQEIKPTALIGVA-AIGGAFSEQILKDMAAFNERPIIFALSNPTSKAEC 415
                   + +++  KP  +  +         +++ + M   +    I    NP      
Sbjct: 200 PGSSTVTADDVIKT-KPDVVSHINGGPTAISVQEVDRIMDETDFAMEIVQCGNPKIADYV 258

Query: 416 SAEQCYKITKGRAIFASGSPFDPVTLPNG 444
           +     K   GR IF + +P     +P G
Sbjct: 259 ARRAAEKGQLGRVIFGNDAPSGTGLIPLG 287


>6EM8-A nrPDB
          Length = 818

 Score = 32.1 bits (71), Expect = 0.68,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 78/217 (35%), Gaps = 19/217 (8%)

Query: 285 LRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGR 344
           + +   +  +  +L    G     IA  +  A+    +P+    K++  +D  G +V G 
Sbjct: 193 IEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDM-GTVVAGT 251

Query: 345 ASLTQEKEKFAHEHEEMKNLEAIVQEI-KPTALIGVAAIGGAF-SEQILKDMAAFNERPI 402
               + +E+     EE++    ++  I +   L+G     GA  +  ILK   A  E   
Sbjct: 252 KYRGEFEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQC 311

Query: 403 IFALSNPTSKAECSAEQCYKITKGRAIFASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVA 462
           I A          + ++  K  +     A    F PV     Q   P   +   +  G+ 
Sbjct: 312 IGA---------TTLDEYRKNIE--KDAALERRFQPV-----QVDEPSVVDTVAILKGLR 355

Query: 463 LGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRL 499
               A     I+D       ++  + VSD+ L +  +
Sbjct: 356 DRYEAHHRINISDEAIEAAVKLSNRYVSDRFLPDKAI 392


>6EMW-E nrPDB
          Length = 181

 Score = 31.3 bits (69), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 3/117 (2%)

Query: 285 LRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGR 344
           + +   +  +  +L    G     IA  +  A+    +P+    K++  +D  G +V G 
Sbjct: 32  IEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDM-GTVVAGT 90

Query: 345 ASLTQEKEKFAHEHEEMKNLEAIVQEI-KPTALIGVAAIGGAF-SEQILKDMAAFNE 399
               + +E+     EE++    ++  I +   L+G     GA  +  ILK   A  E
Sbjct: 91  KYRGEFEERLKKVMEEIQQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGE 147


>6MZB-A nrPDB
          Length = 859

 Score = 31.3 bits (69), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 7/60 (11%)

Query: 209 IGLRQRRVRGSEYDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLLNKYRNQYCTFND 268
           +     R  G  +D+  +  ME+++   G + L       N + + L+NK  N+   F D
Sbjct: 400 VATFYNRKDGKPFDEMDETLMESLTQFLGWSVL-------NPDTYELMNKLENRKDIFQD 452


>3TQO-A nrPDB
          Length = 462

 Score = 30.9 bits (68), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 12/89 (13%)

Query: 198 ENEELLKDPLYIGLRQRRVRGSE-YDDFLDEFMEAVSSKYGMNCLIQFEDFANVNAFRLL 256
           EN  L  +  Y+ LR   V   E    + D F EA+            +DF    AF LL
Sbjct: 313 ENGRLALERFYLALRGLPVVNHEKTSSYTDRFYEAMD-----------DDFNTPIAFALL 361

Query: 257 NKYRNQYCTFNDDIQGTASVAVAGLLAAL 285
            +   +   F D+ Q   +  +A  L  L
Sbjct: 362 FEMVREINRFRDNNQIEKAAVLAAELKCL 390


>3DOO-A nrPDB
          Length = 277

 Score = 30.9 bits (68), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 280 GLLAALRITKNKLSDQTILFQGAGEAALGIAHLI 313
           G +  L+     + D  IL  GAG A+ GIA+ +
Sbjct: 103 GYVNGLKQIYEGIEDAYILILGAGGASKGIANEL 136


>5E64-B nrPDB
          Length = 166

 Score = 30.1 bits (66), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 4/78 (5%)

Query: 335 DSKGLIVKGRASLTQEKEKFAHEHEEMKNLEAIVQEIKPTALIGVAAIGGAFSEQILKDM 394
           D + L     A++     + AH+ + +KNL   +++ +  AL+G   I  +    ++   
Sbjct: 52  DIQQLRNDTNAAIEGFNGRIAHDEQAIKNLAKEIEDARAEALVGELGIIRS----LIVAN 107

Query: 395 AAFNERPIIFALSNPTSK 412
            + N +  ++ L+N  +K
Sbjct: 108 ISMNLKESLYELANQITK 125


>3J3U-A nrPDB
          Length = 810

 Score = 29.7 bits (65), Expect = 3.3,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 77/217 (35%), Gaps = 19/217 (8%)

Query: 285 LRITKNKLSDQTILFQGAGEAALGIAHLIVMALEKEGLPKEKAIKKIWLVDSKGLIVKGR 344
           + +   +  +  +L    G     IA  +   +    +P+    K++  +D  G +V G 
Sbjct: 193 IEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDM-GTVVAGT 251

Query: 345 ASLTQEKEKFAHEHEEMKNLEAIVQEIKP-TALIGVAAIGGAF-SEQILKDMAAFNERPI 402
               + +++     +E++    I+  I     LIG     GA  +  ILK   A  E   
Sbjct: 252 KYRGEFEDRLKKVMDEIRQAGNIILFIDALHTLIGAGGAEGAIDASNILKPSLARGELQC 311

Query: 403 IFALSNPTSKAECSAEQCYKITKGRAIFASGSPFDPVTLPNGQTLYPGQGNNSYVFPGVA 462
           I A          + ++  K  +     A    F P+     Q   P    +  +  G+ 
Sbjct: 312 IGA---------TTLDEYRKYIE--KDAALERRFQPI-----QVDQPSVDESIQILQGLR 355

Query: 463 LGVVACGLRQITDNIFLTTAEVIAQQVSDKHLEEGRL 499
               A     ITD+      ++  + +SD+ L +  +
Sbjct: 356 DRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAI 392


>1M9S-A nrPDB
          Length = 605

 Score = 28.6 bits (62), Expect = 6.8,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%)

Query: 497 GRLYPPLNTIRDVSLKIAEKIVKDAYQEKTATVYPEPQNKEAFVRSQMYS 546
           GR+  PL  +  VS  +   ++K   +  T    P+P  K+ +V    Y+
Sbjct: 280 GRVTQPLKEVYTVSYDVDGTVIKTKVEAGTRITAPKPPTKQGYVFKGWYT 329


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.308    0.125    0.323 

Lambda     K      H
   0.267   0.0385    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,571,442
Number of Sequences: 36641
Number of extensions: 751011
Number of successful extensions: 2161
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2054
Number of HSP's gapped (non-prelim): 49
length of query: 572
length of database: 10,336,785
effective HSP length: 102
effective length of query: 470
effective length of database: 6,599,403
effective search space: 3101719410
effective search space used: 3101719410
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 62 (28.6 bits)