BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P45381 (313 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2I3C-A nrPDB 653 0.0 2GU2-A nrPDB 578 e-165 3NH5-A nrPDB 285 1e-77 2QJ8-A nrPDB 44 1e-04 6MFM-A nrPDB 34 0.078 2G9D-A nrPDB 33 0.16 1YW4-A nrPDB 31 0.57 1YW6-A nrPDB 30 1.2 2O1X-A nrPDB 30 1.4 3NSJ-A nrPDB 30 1.6 2BCO-A nrPDB 30 1.9 4ZZQ-A nrPDB 29 3.0 6B40-A nrPDB 28 5.1 >2I3C-A nrPDB Length = 315 Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/312 (100%), Positives = 312/312 (100%) Query: 2 TSCHIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKKC 61 TSCHIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKKC Sbjct: 4 TSCHIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKKC 63 Query: 62 TRYIDCDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTSN 121 TRYIDCDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTSN Sbjct: 64 TRYIDCDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTSN 123 Query: 122 MGCTLILEDSRNNFLIQMFHYIKTSLAPLPCYVYLIEHPSLKYATTRSIAKYPVGIEVGP 181 MGCTLILEDSRNNFLIQMFHYIKTSLAPLPCYVYLIEHPSLKYATTRSIAKYPVGIEVGP Sbjct: 124 MGCTLILEDSRNNFLIQMFHYIKTSLAPLPCYVYLIEHPSLKYATTRSIAKYPVGIEVGP 183 Query: 182 QPQGVLRADILDQMRKMIKHALDFIHHFNEGKEFPPCAIEVYKIIEKVDYPRDENGEIAA 241 QPQGVLRADILDQMRKMIKHALDFIHHFNEGKEFPPCAIEVYKIIEKVDYPRDENGEIAA Sbjct: 184 QPQGVLRADILDQMRKMIKHALDFIHHFNEGKEFPPCAIEVYKIIEKVDYPRDENGEIAA 243 Query: 242 IIHPNLQDQDWKPLHPGDPMFLTLDGKTIPLGGDCTVYPVFVNEAAYYEKKEAFAKTTKL 301 IIHPNLQDQDWKPLHPGDPMFLTLDGKTIPLGGDCTVYPVFVNEAAYYEKKEAFAKTTKL Sbjct: 244 IIHPNLQDQDWKPLHPGDPMFLTLDGKTIPLGGDCTVYPVFVNEAAYYEKKEAFAKTTKL 303 Query: 302 TLNAKSIRCCLH 313 TLNAKSIRCCLH Sbjct: 304 TLNAKSIRCCLH 315 >2GU2-A nrPDB Length = 312 Score = 578 bits (1489), Expect = e-165, Method: Compositional matrix adjust. Identities = 269/312 (86%), Positives = 296/312 (94%), Gaps = 1/312 (0%) Query: 2 TSCHIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKKC 61 TSC +AEE I+K+AIFGGTHGNELTGVFLV HWL+NGAE+ R GLEVKPFITNPRAV+KC Sbjct: 2 TSC-VAEEPIKKIAIFGGTHGNELTGVFLVTHWLKNGAEVHRAGLEVKPFITNPRAVEKC 60 Query: 62 TRYIDCDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTSN 121 TRYIDCDLNR+FDLENL K+MSEDLPYEVRRAQEINHLFGPK+S+D+YD++FDLHNTTSN Sbjct: 61 TRYIDCDLNRVFDLENLSKEMSEDLPYEVRRAQEINHLFGPKNSDDAYDVVFDLHNTTSN 120 Query: 122 MGCTLILEDSRNNFLIQMFHYIKTSLAPLPCYVYLIEHPSLKYATTRSIAKYPVGIEVGP 181 MGCTLIL DS N+FLIQMFHYIKT +APLPC VYLIEHPSLKYATTRSIAKYPVGIEVGP Sbjct: 121 MGCTLILGDSGNDFLIQMFHYIKTCMAPLPCSVYLIEHPSLKYATTRSIAKYPVGIEVGP 180 Query: 182 QPQGVLRADILDQMRKMIKHALDFIHHFNEGKEFPPCAIEVYKIIEKVDYPRDENGEIAA 241 QP GVLRADILDQMR+M+KHALDFI FNEGKEFPPCAI+VYKI+EKVDYPR+E+G++AA Sbjct: 181 QPHGVLRADILDQMRRMLKHALDFIQRFNEGKEFPPCAIDVYKIMEKVDYPRNESGDVAA 240 Query: 242 IIHPNLQDQDWKPLHPGDPMFLTLDGKTIPLGGDCTVYPVFVNEAAYYEKKEAFAKTTKL 301 +IHPNLQDQDWKPLHPGDP+F++LDGK IPLGGDCTVYPVFVNEAAYYEKKEAFAKTTKL Sbjct: 241 VIHPNLQDQDWKPLHPGDPVFVSLDGKVIPLGGDCTVYPVFVNEAAYYEKKEAFAKTTKL 300 Query: 302 TLNAKSIRCCLH 313 TLNAKSIR LH Sbjct: 301 TLNAKSIRSTLH 312 >3NH5-A nrPDB Length = 327 Score = 285 bits (730), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 132/308 (42%), Positives = 195/308 (63%), Gaps = 1/308 (0%) Query: 1 MTSCHIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKK 60 M+S + E + +VA+ GGTHGNE+ GV+L ++WL+N E+QR P + NP A Sbjct: 10 MSSLPGSREPLLRVAVTGGTHGNEMCGVYLARYWLQNPGELQRPSFSAMPVLANPAATAA 69 Query: 61 CTRYIDCDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTS 120 C RY+D DLNR L LG + D PYEV+RA+E+N L GPK + ++D DLHNTT+ Sbjct: 70 CCRYLDRDLNRSCTLTFLGSTATPDDPYEVKRARELNQLLGPKGTGQAFDFTLDLHNTTA 129 Query: 121 NMGCTLILEDSRNNFLIQMFHYIKTSLAPLPCYVYLIEHPSLKYATTRSIAKYPVGIEVG 180 N G LI E S +F + + HY++ +PC ++L E + + SI+K + + +G Sbjct: 130 NTGVCLISE-SNISFNLHLCHYLQRQNPGMPCRLFLYEPAGTETFSVESISKNGICLAMG 188 Query: 181 PQPQGVLRADILDQMRKMIKHALDFIHHFNEGKEFPPCAIEVYKIIEKVDYPRDENGEIA 240 PQPQGVLRAD+ +MR ++ LDFI FN+G + P +++Y+ + VD+PR +G++A Sbjct: 189 PQPQGVLRADLFSRMRALVASILDFIELFNQGMDLPAFEMDIYRNLGSVDFPRTADGDLA 248 Query: 241 AIIHPNLQDQDWKPLHPGDPMFLTLDGKTIPLGGDCTVYPVFVNEAAYYEKKEAFAKTTK 300 +HP LQD D++PL PG+P+F G+ + GD VYPVF+NEAAYYEK AF K+ K Sbjct: 249 GTVHPQLQDHDFEPLRPGEPIFKLFSGEDVLYEGDSIVYPVFINEAAYYEKHVAFLKSEK 308 Query: 301 LTLNAKSI 308 + + ++ Sbjct: 309 IRVTVPAL 316 >2QJ8-A nrPDB Length = 332 Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 49/112 (43%), Gaps = 15/112 (13%) Query: 16 IFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKKCTRYIDCD---LNRI 72 I GG HGNEL G L + ++ E QR G + NP AV+ TR D LNR+ Sbjct: 50 ITGGNHGNELQGPILARRLVKWLPEAQRCGRIIIVPEINPLAVQAWTRNTPIDGKNLNRV 109 Query: 73 FDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTSNMGC 124 F + G +SE R A I+ L P D + DLH+ C Sbjct: 110 FPGRSDG-SVSE------RIADAISRLLLP-----VVDTVLDLHSFGPTWDC 149 >6MFM-A nrPDB Length = 313 Score = 34.3 bits (77), Expect = 0.078, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 16/122 (13%) Query: 14 VAIFGG--THGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKKCTRYIDCDLNR 71 VA+ GG T G LT W+E G + R+G +V ++ + + Sbjct: 120 VALIGGDTTQGPHLTITVTAMGWIETGKAVLRSGAKVGDYVCVSGQIG----------DA 169 Query: 72 IFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDS--EDSYDIIFDLHNT--TSNMGCTLI 127 + L++LG + + L Y R + L G S + S + DL + S +G LI Sbjct: 170 AYGLQHLGHSLQQRLDYPTPRCKLGEELKGLASSMIDVSDGLAQDLGHILKASKVGARLI 229 Query: 128 LE 129 LE Sbjct: 230 LE 231 >2G9D-A nrPDB Length = 350 Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Query: 12 QKVAIFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFI-TNPRAVKKCTRYIDCDLN 70 + + I G HG+E + L+ W+++ + E FI +P+A + R+I+ +LN Sbjct: 54 KNMVISCGIHGDETAPMELLDKWIDDIVSGFQPVAERCLFIMAHPQATVRHVRFIEQNLN 113 Query: 71 RIFD 74 R+FD Sbjct: 114 RLFD 117 >1YW4-A nrPDB Length = 341 Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 6/78 (7%) Query: 19 GTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFI--TNPRAVKKCTRYIDCDLNRIFDLE 76 G HGNE + +V L + A Q L + + N A+++ RY + D+NR+F Sbjct: 54 GVHGNETAPIEVVDGMLTDIAAGQ-LALNCRLLVMFANLDAIRQGVRYGNYDMNRLF--- 109 Query: 77 NLGKKMSEDLPYEVRRAQ 94 N +LP VR A+ Sbjct: 110 NGAHARHPELPESVRAAE 127 >1YW6-A nrPDB Length = 335 Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 14/100 (14%) Query: 14 VAIFGGTHGNELTGVFLVKHWL---ENGAEIQRTGLEVKPFITNPRAVKKCTRYIDCDLN 70 + I G HGNE V ++ L +G R L V + NP A+K+ RY D+N Sbjct: 51 LVISAGIHGNETAPVEMLDALLGAISHGEIPLRWRLLV--ILGNPPALKQGKRYCHSDMN 108 Query: 71 RIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYD 110 R+F G+ E RA+E+ ED YD Sbjct: 109 RMFG----GRWQLFAESGETCRARELEQCL-----EDFYD 139 >2O1X-A nrPDB Length = 629 Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust. Identities = 12/42 (28%), Positives = 22/42 (52%) Query: 229 VDYPRDENGEIAAIIHPNLQDQDWKPLHPGDPMFLTLDGKTI 270 + YPR ++ A P+L+ +W+ L GD + + GK + Sbjct: 476 IRYPRGNTAQVPAGTWPDLKWGEWERLKGGDDVVILAGGKAL 517 >3NSJ-A nrPDB Length = 540 Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust. Identities = 12/58 (20%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 173 YPVGIEVGPQPQGVLRADILDQMRKMIKHALD--FIHHFNEGKEFPPCAIEVYKIIEK 228 + VG++V P+P+ +RA + K+ A + + +N + C + +++++K Sbjct: 108 WRVGLDVNPRPEANMRASVAGSHSKVANFAAEKTYQDQYNFNSDTVECRMYSFRLVQK 165 >2BCO-A nrPDB Length = 350 Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust. Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 1/67 (1%) Query: 9 EHIQKVAIFGGTHGNELTGVFLVKHWLEN-GAEIQRTGLEVKPFITNPRAVKKCTRYIDC 67 + + + I G HG+E + LV +++ + Q+ I +P + TR+++ Sbjct: 51 QETKNIIISCGIHGDETAPMELVDSIIKDIESGFQKVDARCLFIIAHPESTLAHTRFLEE 110 Query: 68 DLNRIFD 74 +LNR+FD Sbjct: 111 NLNRLFD 117 >4ZZQ-A nrPDB Length = 438 Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust. Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 16/93 (17%) Query: 98 HLFGPKDSEDSYDIIFDLHNTTSNMGCTLILEDSRNNFLIQMFHYI------KTSLAPLP 151 ++G SEDS + F + N+G L L + +N+ Q+FH + ++ L Sbjct: 79 SVYGVTTSEDSVRLNFVTQSQGKNIGSRLFLMSNESNY--QLFHVLGQEFTFDVDVSNLD 136 Query: 152 C----YVYLI----EHPSLKYATTRSIAKYPVG 176 C +YL+ + S ++ T + AKY G Sbjct: 137 CGLNGALYLVSMDSDGGSARFPTNEAGAKYGTG 169 >6B40-A nrPDB Length = 658 Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust. Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 12/81 (14%) Query: 154 VYLIEHPSLKYATTRSIAKYPVGIEVGPQPQGVLRA-----DILDQMRKMIKHALDFIHH 208 V L++ P K A +AK+ Q + V RA D+ D++R+ A++ + Sbjct: 501 VALVDKPDRKSALVEVLAKFR-------QLRKVYRANWPLNDMSDEVRQYKAKAVEMAND 553 Query: 209 FNEGKEFPPCAIEVYKIIEKV 229 + PC ++K+IE V Sbjct: 554 LKTHFPYAPCTNYLHKVIEHV 574 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2I3C-A nrPDB 568 e-162 2GU2-A nrPDB 557 e-159 3NH5-A nrPDB 507 e-144 2QJ8-A nrPDB 142 3e-34 Sequences not found previously or not previously below threshold: 3NA6-A nrPDB 55 5e-08 3CDX-A nrPDB 47 1e-05 2QVP-A nrPDB 37 0.010 3B2Y-A nrPDB 37 0.015 1YW6-A nrPDB 36 0.022 2G9D-A nrPDB 35 0.050 2BCO-A nrPDB 33 0.13 1YW4-A nrPDB 32 0.28 4OKO-A nrPDB 32 0.33 3IEH-A nrPDB 30 0.93 2O1X-A nrPDB 30 0.93 6CXO-A nrPDB 28 3.8 3I44-A nrPDB 27 9.4 >2I3C-A nrPDB Length = 315 Score = 568 bits (1463), Expect = e-162, Method: Composition-based stats. Identities = 312/312 (100%), Positives = 312/312 (100%) Query: 2 TSCHIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKKC 61 TSCHIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKKC Sbjct: 4 TSCHIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKKC 63 Query: 62 TRYIDCDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTSN 121 TRYIDCDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTSN Sbjct: 64 TRYIDCDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTSN 123 Query: 122 MGCTLILEDSRNNFLIQMFHYIKTSLAPLPCYVYLIEHPSLKYATTRSIAKYPVGIEVGP 181 MGCTLILEDSRNNFLIQMFHYIKTSLAPLPCYVYLIEHPSLKYATTRSIAKYPVGIEVGP Sbjct: 124 MGCTLILEDSRNNFLIQMFHYIKTSLAPLPCYVYLIEHPSLKYATTRSIAKYPVGIEVGP 183 Query: 182 QPQGVLRADILDQMRKMIKHALDFIHHFNEGKEFPPCAIEVYKIIEKVDYPRDENGEIAA 241 QPQGVLRADILDQMRKMIKHALDFIHHFNEGKEFPPCAIEVYKIIEKVDYPRDENGEIAA Sbjct: 184 QPQGVLRADILDQMRKMIKHALDFIHHFNEGKEFPPCAIEVYKIIEKVDYPRDENGEIAA 243 Query: 242 IIHPNLQDQDWKPLHPGDPMFLTLDGKTIPLGGDCTVYPVFVNEAAYYEKKEAFAKTTKL 301 IIHPNLQDQDWKPLHPGDPMFLTLDGKTIPLGGDCTVYPVFVNEAAYYEKKEAFAKTTKL Sbjct: 244 IIHPNLQDQDWKPLHPGDPMFLTLDGKTIPLGGDCTVYPVFVNEAAYYEKKEAFAKTTKL 303 Query: 302 TLNAKSIRCCLH 313 TLNAKSIRCCLH Sbjct: 304 TLNAKSIRCCLH 315 >2GU2-A nrPDB Length = 312 Score = 557 bits (1436), Expect = e-159, Method: Composition-based stats. Identities = 269/312 (86%), Positives = 296/312 (94%), Gaps = 1/312 (0%) Query: 2 TSCHIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKKC 61 TSC +AEE I+K+AIFGGTHGNELTGVFLV HWL+NGAE+ R GLEVKPFITNPRAV+KC Sbjct: 2 TSC-VAEEPIKKIAIFGGTHGNELTGVFLVTHWLKNGAEVHRAGLEVKPFITNPRAVEKC 60 Query: 62 TRYIDCDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTSN 121 TRYIDCDLNR+FDLENL K+MSEDLPYEVRRAQEINHLFGPK+S+D+YD++FDLHNTTSN Sbjct: 61 TRYIDCDLNRVFDLENLSKEMSEDLPYEVRRAQEINHLFGPKNSDDAYDVVFDLHNTTSN 120 Query: 122 MGCTLILEDSRNNFLIQMFHYIKTSLAPLPCYVYLIEHPSLKYATTRSIAKYPVGIEVGP 181 MGCTLIL DS N+FLIQMFHYIKT +APLPC VYLIEHPSLKYATTRSIAKYPVGIEVGP Sbjct: 121 MGCTLILGDSGNDFLIQMFHYIKTCMAPLPCSVYLIEHPSLKYATTRSIAKYPVGIEVGP 180 Query: 182 QPQGVLRADILDQMRKMIKHALDFIHHFNEGKEFPPCAIEVYKIIEKVDYPRDENGEIAA 241 QP GVLRADILDQMR+M+KHALDFI FNEGKEFPPCAI+VYKI+EKVDYPR+E+G++AA Sbjct: 181 QPHGVLRADILDQMRRMLKHALDFIQRFNEGKEFPPCAIDVYKIMEKVDYPRNESGDVAA 240 Query: 242 IIHPNLQDQDWKPLHPGDPMFLTLDGKTIPLGGDCTVYPVFVNEAAYYEKKEAFAKTTKL 301 +IHPNLQDQDWKPLHPGDP+F++LDGK IPLGGDCTVYPVFVNEAAYYEKKEAFAKTTKL Sbjct: 241 VIHPNLQDQDWKPLHPGDPVFVSLDGKVIPLGGDCTVYPVFVNEAAYYEKKEAFAKTTKL 300 Query: 302 TLNAKSIRCCLH 313 TLNAKSIR LH Sbjct: 301 TLNAKSIRSTLH 312 >3NH5-A nrPDB Length = 327 Score = 507 bits (1305), Expect = e-144, Method: Composition-based stats. Identities = 132/308 (42%), Positives = 195/308 (63%), Gaps = 1/308 (0%) Query: 1 MTSCHIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKK 60 M+S + E + +VA+ GGTHGNE+ GV+L ++WL+N E+QR P + NP A Sbjct: 10 MSSLPGSREPLLRVAVTGGTHGNEMCGVYLARYWLQNPGELQRPSFSAMPVLANPAATAA 69 Query: 61 CTRYIDCDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTS 120 C RY+D DLNR L LG + D PYEV+RA+E+N L GPK + ++D DLHNTT+ Sbjct: 70 CCRYLDRDLNRSCTLTFLGSTATPDDPYEVKRARELNQLLGPKGTGQAFDFTLDLHNTTA 129 Query: 121 NMGCTLILEDSRNNFLIQMFHYIKTSLAPLPCYVYLIEHPSLKYATTRSIAKYPVGIEVG 180 N G LI E S +F + + HY++ +PC ++L E + + SI+K + + +G Sbjct: 130 NTGVCLISE-SNISFNLHLCHYLQRQNPGMPCRLFLYEPAGTETFSVESISKNGICLAMG 188 Query: 181 PQPQGVLRADILDQMRKMIKHALDFIHHFNEGKEFPPCAIEVYKIIEKVDYPRDENGEIA 240 PQPQGVLRAD+ +MR ++ LDFI FN+G + P +++Y+ + VD+PR +G++A Sbjct: 189 PQPQGVLRADLFSRMRALVASILDFIELFNQGMDLPAFEMDIYRNLGSVDFPRTADGDLA 248 Query: 241 AIIHPNLQDQDWKPLHPGDPMFLTLDGKTIPLGGDCTVYPVFVNEAAYYEKKEAFAKTTK 300 +HP LQD D++PL PG+P+F G+ + GD VYPVF+NEAAYYEK AF K+ K Sbjct: 249 GTVHPQLQDHDFEPLRPGEPIFKLFSGEDVLYEGDSIVYPVFINEAAYYEKHVAFLKSEK 308 Query: 301 LTLNAKSI 308 + + ++ Sbjct: 309 IRVTVPAL 316 >2QJ8-A nrPDB Length = 332 Score = 142 bits (357), Expect = 3e-34, Method: Composition-based stats. Identities = 66/269 (24%), Positives = 100/269 (37%), Gaps = 44/269 (16%) Query: 3 SCHIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKKCT 62 SC+ E + I GG HGNEL G L + ++ E QR G + NP AV+ T Sbjct: 39 SCNRGEGP--SLLITGGNHGNELQGPILARRLVKWLPEAQRCGRIIIVPEINPLAVQAWT 96 Query: 63 RYIDCD---LNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTT 119 R D LNR+F + G +SE R A I+ L P D + DLH+ Sbjct: 97 RNTPIDGKNLNRVFPGRSDG-SVSE------RIADAISRLLLP-----VVDTVLDLHSFG 144 Query: 120 SNMGCTLILEDSRNNFLIQMFHYIKTSLA-PLPCYVYLIEHPSLKYATTRSIAKYP---V 175 C + + QM + S A LP + L EH + + + Sbjct: 145 PTWDCAPSIISHPIADIDQMTKTVSISKAFKLPVTL-LWEHNETDGMFDTLVHRQGKTFI 203 Query: 176 GIEVGPQPQGVLRADILDQMRKMIKHALDFIHHFNEGKEFPPC-AIEVYKIIEKVDY--- 231 E G GV+ A+ L +++ L + E+P + + +E Sbjct: 204 CTEFG---GGVVSAEALTIYEAGVRNGLIALGLVKGKAEYPTFRQQKTGQTLETTSSDQL 260 Query: 232 ---------PR------DENGEIAAIIHP 245 PR E G++ ++HP Sbjct: 261 KSPSPGIFEPRCSVMDEVEQGDVVGVLHP 289 >3NA6-A nrPDB Length = 331 Score = 54.6 bits (130), Expect = 5e-08, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 63/198 (31%), Gaps = 28/198 (14%) Query: 16 IFGGTHGNELTGVFLVKHWLENGAEIQRTGLEVKPFITNPRAVKKCTRYIDCD---LNRI 72 + G HG+E G ++ TG + N A + R D LNR Sbjct: 54 LTGANHGDEYEGPVALQELAATTRAEDVTGRLIIVPYFNYPAFRASARTSPIDRGNLNRA 113 Query: 73 FDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTSNMG-----CTLI 127 F D + A P D+ D H+ + I Sbjct: 114 FPGR-------PDGTVTQKIADYFQRTLLPMA-----DVAVDFHSGGKTLDFVPFAAAHI 161 Query: 128 LEDSRNNFLIQ--MFHYIKTSLAPLPCYVYLIEHPSLKYATTRSIAKYPVGIEVGPQPQG 185 LED ++Q F ++ AP + I+ + + K V E+G Sbjct: 162 LEDK----VLQDACFAAMQAFNAPYSVQLLEIDSEGMYDTAVEEMGKVLVTTELGGGGMS 217 Query: 186 VLRADILDQ--MRKMIKH 201 R++ + + +R ++ H Sbjct: 218 TARSNAIAKKGLRNVLIH 235 >3CDX-A nrPDB Length = 354 Score = 46.9 bits (110), Expect = 1e-05, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 42/119 (35%), Gaps = 23/119 (19%) Query: 14 VAIFGGTHGNELTGVF----LVKHWLENGAEIQRTGLEVKPFITNPRAVKKCTRYID--- 66 V + GG HG+E G L + E+Q G + N A++ TR Sbjct: 56 VLLTGGVHGDEYEGQIAISDLARRL--RPEEVQ--GRVIMLPAVNMPAIQSDTRLSPVDG 111 Query: 67 CDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTSNMGCT 125 D+NR F + G + A ++ + P DI D+H + T Sbjct: 112 RDINRCFPGDPRGT-------FSQMLAHFLDSVILPMA-----DISVDMHTAGHSYDST 158 >2QVP-A nrPDB Length = 275 Score = 36.9 bits (84), Expect = 0.010, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 5/100 (5%) Query: 5 HIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENG-AEI-QRTGLEVKPFITNPRAVKKCT 62 + + + I G HG E G + + H+L E+ +R L V P + NP K Sbjct: 59 PGQKAGLPNLLISAGFHGEESAGPWGLLHFLSQLDGELFKRVNLSVLP-LVNPTGFAKGH 117 Query: 63 RYIDC--DLNRIFDLENLGKKMSEDLPYEVRRAQEINHLF 100 R+ + + NR F +EN K D E R E HL Sbjct: 118 RFNELGENPNRGFFIENGKAKPGADTSAEGRILLEHAHLL 157 >3B2Y-A nrPDB Length = 275 Score = 36.5 bits (83), Expect = 0.015, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 5/97 (5%) Query: 8 EEHIQKVAIFGGTHGNELTGVFLVKHWLE--NGAEIQRTGLEVKPFITNPRAVKKCTRY- 64 + + I G HG E G + + H+L A +R L + P + NP K R+ Sbjct: 63 RSDLPSLLISSGFHGEEAAGPWGMLHFLRGLQPALFERVNLSLLP-LVNPTGFKAGHRFN 121 Query: 65 -IDCDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLF 100 + NR F LEN +E E + E L Sbjct: 122 RFGENPNRGFTLENGKPTPNEHTSLEGKLLLEHAQLL 158 >1YW6-A nrPDB Length = 335 Score = 36.2 bits (82), Expect = 0.022, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 62/180 (34%), Gaps = 18/180 (10%) Query: 10 HIQKVAIFGGTHGNELTGVFLVKHWLENGAEIQRTGL-EVKPFITNPRAVKKCTRYIDCD 68 + I G HGNE V ++ L + + + + NP A+K+ RY D Sbjct: 47 PQGALVISAGIHGNETAPVEMLDALLGAISHGEIPLRWRLLVILGNPPALKQGKRYCHSD 106 Query: 69 LNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGP--KDSEDSYDIIFDLH-----NTTSN 121 +NR+F S E RA+E+ ++S DLH + Sbjct: 107 MNRMFGGRWQLFAES----GETCRARELEQCLEDFYDQGKESVRWHLDLHTAIRGSLHPQ 162 Query: 122 MGCTLILEDSRNNFLIQMFHYIKTSLAPLPCYVYLIEHPSL-KYATTRSIAKYPVGIEVG 180 G +L + + ++ A L V+ E + + R +E+G Sbjct: 163 FG---VLPQRDIPWDEKFLTWLGA--AGLEALVFHQEPGGTFTHFSARHFGALACTLELG 217 >2G9D-A nrPDB Length = 350 Score = 34.6 bits (78), Expect = 0.050, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 17/112 (15%) Query: 12 QKVAIFGGTHGNELTGVFLVKHWLENG-----AEIQRTGLEVKPFITNPRAVKKCTRYID 66 + + I G HG+E + L+ W+++ +R + +P+A + R+I+ Sbjct: 54 KNMVISCGIHGDETAPMELLDKWIDDIVSGFQPVAERCLFI----MAHPQATVRHVRFIE 109 Query: 67 CDLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGP--KDSEDSYDIIFDLH 116 +LNR+FD + E+ A + L ++++ DLH Sbjct: 110 QNLNRLFDDKPHTPST------ELAIADNLKVLLRQFFANTDEHSRWHLDLH 155 >2BCO-A nrPDB Length = 350 Score = 33.5 bits (75), Expect = 0.13, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 9/111 (8%) Query: 9 EHIQKVAIFGGTHGNELTGVFLVKHWLENGAE-IQRTGLEVKPFITNPRAVKKCTRYIDC 67 + + + I G HG+E + LV +++ Q+ I +P + TR+++ Sbjct: 51 QETKNIIISCGIHGDETAPMELVDSIIKDIESGFQKVDARCLFIIAHPESTLAHTRFLEE 110 Query: 68 DLNRIFDLENLGKKMSEDLPYEVRRAQEINHLFGP--KDSEDSYDIIFDLH 116 +LNR+FD + + E+ A + L +D+E DLH Sbjct: 111 NLNRLFD------EKEHEPTKELAIADTLKLLVRDFYQDTEPKTRWHLDLH 155 >1YW4-A nrPDB Length = 341 Score = 32.3 bits (72), Expect = 0.28, Method: Composition-based stats. Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 14 VAIFGGTHGNELTGVFLVKHWLENGAEIQRT-GLEVKPFITNPRAVKKCTRYIDCDLNRI 72 V + G HGNE + +V L + A Q + N A+++ RY + D+NR+ Sbjct: 49 VLLSCGVHGNETAPIEVVDGMLTDIAAGQLALNCRLLVMFANLDAIRQGVRYGNYDMNRL 108 Query: 73 FDLENLGKKMSEDLPYEVRRAQ 94 F+ +LP VR A+ Sbjct: 109 FNG---AHARHPELPESVRAAE 127 >4OKO-A nrPDB Length = 312 Score = 31.9 bits (71), Expect = 0.33, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 40/113 (35%), Gaps = 16/113 (14%) Query: 14 VAIFGGTHGNELTGVFLVKHWLENGA-EIQRTGLEVKPFITNPRAVKKCTRYID--CDLN 70 V + GG HG E +GV + + A E R V +P + R+ D N Sbjct: 79 VLVTGGVHGYETSGVQGAISFAQTRALEFARDYNIVILPCLSPWGYETINRWNPNALDPN 138 Query: 71 RIFDLENLGKKMSEDLPYEVRRAQEINHLFGPKDSEDSYDIIFDLHNTTSNMG 123 R F LE+ ++ + Y E + + DLH TT Sbjct: 139 RSFYLESGCQEAVLAMKYVFSLGVE-------------FLMHIDLHETTDTDD 178 >3IEH-A nrPDB Length = 276 Score = 30.4 bits (67), Expect = 0.93, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 5/100 (5%) Query: 5 HIAEEHIQKVAIFGGTHGNELTGVFLVKHWLENGAE--IQRTGLEVKPFITNPRAVKKCT 62 A+ + + I G HG E G + + H+L + +R L + P + NP + Sbjct: 60 PAAKSGLPSLLISAGFHGEESAGPWGLLHFLSEASADLFERVNLSLLP-LVNPTGFSRGH 118 Query: 63 RYIDC--DLNRIFDLENLGKKMSEDLPYEVRRAQEINHLF 100 R+ + NR F EN K +E E + + L Sbjct: 119 RFNKYGENPNRGFVFENGKPKANEHTSVEGKLLLDHAQLL 158 >2O1X-A nrPDB Length = 629 Score = 30.4 bits (67), Expect = 0.93, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 22/45 (48%) Query: 228 KVDYPRDENGEIAAIIHPNLQDQDWKPLHPGDPMFLTLDGKTIPL 272 + YPR ++ A P+L+ +W+ L GD + + GK + Sbjct: 475 AIRYPRGNTAQVPAGTWPDLKWGEWERLKGGDDVVILAGGKALDY 519 >6CXO-A nrPDB Length = 529 Score = 28.5 bits (62), Expect = 3.8, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Query: 80 KKMSEDLPYEVRRAQEINHL-FGPKDSEDSYDIIFDLHNTTSNMGCTLILEDSRNNFLIQ 138 + SE P +R + + L FG + + D++ D C I E+ N+F + Sbjct: 28 SEWSECDPCLKQRFRSRSILAFGQFNGKSCVDVLGDRQGCEPTQECEEIQENCGNDFQCE 87 Query: 139 MFHYIKTSL 147 IK L Sbjct: 88 TGRCIKRRL 96 >3I44-A nrPDB Length = 497 Score = 27.3 bits (59), Expect = 9.4, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 23/45 (51%) Query: 100 FGPKDSEDSYDIIFDLHNTTSNMGCTLILEDSRNNFLIQMFHYIK 144 GP S++ YD I DL + + G TL+ + ++ +Y++ Sbjct: 342 IGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVR 386 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.138 0.391 Lambda K H 0.267 0.0417 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,845,778 Number of Sequences: 36641 Number of extensions: 546870 Number of successful extensions: 1283 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 1261 Number of HSP's gapped (non-prelim): 35 length of query: 313 length of database: 10,336,785 effective HSP length: 97 effective length of query: 216 effective length of database: 6,782,608 effective search space: 1465043328 effective search space used: 1465043328 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 59 (27.3 bits)