BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P43487 (201 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1K5G-B nrPDB 408 e-115 5CLQ-B nrPDB 170 4e-43 1RRP-B nrPDB 167 4e-42 3M1I-B nrPDB 157 4e-39 5DHA-B nrPDB 156 5e-39 4L6E-A nrPDB 150 5e-37 1XKE-A nrPDB 128 2e-30 3WYF-B nrPDB 47 4e-06 3OAN-A nrPDB 45 3e-05 2CRF-A nrPDB 39 0.001 6OJ5-A nrPDB 32 0.25 3KZ4-A nrPDB 31 0.46 4ZE8-A nrPDB 29 1.4 5OPT-P nrPDB 28 3.0 4V6H-A nrPDB 27 4.9 4US5-D nrPDB 27 5.5 >1K5G-B nrPDB Length = 201 Score = 408 bits (1048), Expect = e-115, Method: Compositional matrix adjust. Identities = 201/201 (100%), Positives = 201/201 (100%) Query: 1 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS 60 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS Sbjct: 1 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS 60 Query: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW 120 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW Sbjct: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW 120 Query: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV 180 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV Sbjct: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV 180 Query: 181 AEKLEALSVKEETKEDAEEKQ 201 AEKLEALSVKEETKEDAEEKQ Sbjct: 181 AEKLEALSVKEETKEDAEEKQ 201 >5CLQ-B nrPDB Length = 167 Score = 170 bits (430), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 87/136 (63%), Positives = 104/136 (76%), Gaps = 4/136 (2%) Query: 25 PQFEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEK 83 P FEP+V LP++ E+KT EEDEEE F RAKLFRF E+ EWKERG G+VK+L+HK Sbjct: 16 PHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVESK--EWKERGIGNVKILRHKTS 73 Query: 84 GAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFL 143 G IRLLMRR++ LKICANHYI+P M+L PNAGSDR++VW+ D+ADE PKPE LAIRF Sbjct: 74 GKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHA-LDYADELPKPEQLAIRFK 132 Query: 144 NAENAQKFKTKFEECR 159 E A FK KFEE + Sbjct: 133 TPEEAALFKCKFEEAQ 148 >1RRP-B nrPDB Length = 134 Score = 167 bits (422), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 86/133 (64%), Positives = 102/133 (76%), Gaps = 4/133 (3%) Query: 26 QFEPIVSLPEQ-EIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKG 84 FEP+V LP++ E+KT EEDEEE F RAKLFRF E+ EWKERG G+VK+L+HK G Sbjct: 1 HFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVESK--EWKERGIGNVKILRHKTSG 58 Query: 85 AIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLN 144 IRLLMRR++ LKICANHYI+P M+L PNAGSDR++VW+ D+ADE PKPE LAIRF Sbjct: 59 KIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWHA-LDYADELPKPEQLAIRFKT 117 Query: 145 AENAQKFKTKFEE 157 E A FK KFEE Sbjct: 118 PEEAALFKCKFEE 130 >3M1I-B nrPDB Length = 191 Score = 157 bits (396), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 83/154 (53%), Positives = 106/154 (68%), Gaps = 3/154 (1%) Query: 6 DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLP 65 DT E+ ++ ES D FEP+V L + ++KT+EEDEE L+K+RAKLFRF + D Sbjct: 35 DTKEETKKEGDDAPES-PDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRF--DADAK 91 Query: 66 EWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTH 125 EWKERGTGD K LK+K+ +R+LMRRDKTLKICANH I P LKPN GSDR+WV+ Sbjct: 92 EWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACT 151 Query: 126 ADFADECPKPELLAIRFLNAENAQKFKTKFEECR 159 AD A+ + AIRF + ENA KFK +FE+ + Sbjct: 152 ADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQ 185 >5DHA-B nrPDB Length = 143 Score = 156 bits (395), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 78/136 (57%), Positives = 96/136 (70%), Gaps = 2/136 (1%) Query: 21 SNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKH 80 D FEP+V L + ++KT+EEDEE L+K+RAKLFRF + D EWKERGTGD K LK+ Sbjct: 1 GGSDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRF--DADAKEWKERGTGDCKFLKN 58 Query: 81 KEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAI 140 K+ +R+LMRRDKTLKICANH I P LKPN GSDR+WV+ AD A+ + AI Sbjct: 59 KKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAI 118 Query: 141 RFLNAENAQKFKTKFE 156 RF + ENA KFK +FE Sbjct: 119 RFGSKENADKFKEEFE 134 >4L6E-A nrPDB Length = 155 Score = 150 bits (378), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 79/146 (54%), Positives = 100/146 (68%), Gaps = 3/146 (2%) Query: 22 NHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHK 81 N D FEPIVSLPE E+K+ EEDEE LFK RAKL+R+ + D+ +WKERG GD+K+L H Sbjct: 12 NEDIHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRW--DRDVSQWKERGVGDIKILWHT 69 Query: 82 EKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIR 141 K R+LMRRD+ K+CANH IT MELKP S+ A VW T +D+AD K E LA+R Sbjct: 70 MKNYYRILMRRDQVFKVCANHVITKTMELKPLNVSNNALVW-TASDYADGEAKVEQLAVR 128 Query: 142 FLNAENAQKFKTKFEECRKEIEEREK 167 F E A FK FEEC++ + + +K Sbjct: 129 FKTKEVADCFKKTFEECQQNLMKLQK 154 >1XKE-A nrPDB Length = 130 Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 63/119 (52%), Positives = 88/119 (73%), Gaps = 3/119 (2%) Query: 42 EEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICAN 101 EEDE+ L+ R KLFRF +E + +WKERG G++K+LK++ G +R+LMRR++ LK+CAN Sbjct: 4 EEDEKVLYSQRVKLFRFDAE--VSQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCAN 61 Query: 102 HYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRK 160 H+IT M LKP +GSDRAW+W +DF+D K E LA +F E A++FK KFEEC++ Sbjct: 62 HWITTTMNLKPLSGSDRAWMW-LASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQR 119 >3WYF-B nrPDB Length = 238 Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 3/70 (4%) Query: 33 LPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKG-AIRLLMR 91 L +QE+K+ EE EE ++++ AKL++ + N WKERG G +K+ K K+ R++MR Sbjct: 111 LQKQEVKSGEESEECIYQVNAKLYQLS--NIKEGWKERGVGIIKINKSKDDVEKTRIVMR 168 Query: 92 RDKTLKICAN 101 LK+ N Sbjct: 169 SRGILKVILN 178 >3OAN-A nrPDB Length = 130 Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%) Query: 42 EEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHK-EKGAIRLLMRRDKTLKICA 100 EE+EE LF +AKL F ++D + RG G++KLL+ K +KG +R+LMR + + Sbjct: 7 EENEEVLFCEKAKLLIF--DSDTKGYTSRGVGELKLLRKKDDKGKVRVLMRSEGMGHVLL 64 Query: 101 NHYITPMMELKP 112 N + + +P Sbjct: 65 NTSVVKSFKYQP 76 >2CRF-A nrPDB Length = 150 Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 6/82 (7%) Query: 33 LPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKL--LKHKEKGAI--RL 88 L + E+ T EE E + +M+ KLF F + W ERG G ++L + + G + RL Sbjct: 14 LEKVEVITGEEAESNVLQMQCKLFVF--DKTSQSWVERGRGLLRLNDMASTDDGTLQSRL 71 Query: 89 LMRRDKTLKICANHYITPMMEL 110 +MR +L++ N + M++ Sbjct: 72 VMRTQGSLRLILNTKLWAQMQI 93 >6OJ5-A nrPDB Length = 887 Score = 31.6 bits (70), Expect = 0.25, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%) Query: 7 THEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPE 66 T E+H + P FEP E +K LE+ + E K + KLFR LP Sbjct: 85 TKEEHQKEVQYEILQKTIPTFEP----KESILKKLEDIKPEQVKKQTKLFRIFEPRQLPV 140 Query: 67 WKERGTGDVK 76 ++ G +++ Sbjct: 141 YRANGEKELR 150 >3KZ4-A nrPDB Length = 880 Score = 30.8 bits (68), Expect = 0.46, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%) Query: 7 THEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPE 66 T E+H + P FEP E +K LE+ + E K + KLFR LP Sbjct: 78 TKEEHQKEIQYEILQKTIPTFEP----KESILKKLEDIKPEQAKKQTKLFRIFEPRQLPI 133 Query: 67 WKERGTGDVK 76 ++ G +++ Sbjct: 134 YRANGEKELR 143 >4ZE8-A nrPDB Length = 499 Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 6/76 (7%) Query: 67 WKERGTGDVKLLKHKEKGAI----RLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVW 122 WK+ G V +K G+ + MR + + Y T + E PN + W W Sbjct: 362 WKQIGVNVV--MKTYAPGSFPPDNQTWMRNWSNGQWMTDAYATIVPEFGPNGQVQKRWGW 419 Query: 123 NTHADFADECPKPELL 138 A+F + C K +L Sbjct: 420 KAPAEFNELCQKVTVL 435 >5OPT-P nrPDB Length = 250 Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 12/71 (16%) Query: 131 ECPKPELLAIRFLNAENAQKFKTKFEECRKEIEER---------EKKAGSGKND---HAE 178 + PK + L + A A+K K E+ RK EER ++A +N HA Sbjct: 175 KAPKIQRLITTAVKARRAKKAKVAIEKVRKSAEERRAYLHLIGTRRRAARQRNSARRHAH 234 Query: 179 KVAEKLEALSV 189 KVA + +AL++ Sbjct: 235 KVAAQKQALAL 245 >4V6H-A nrPDB Length = 484 Score = 27.3 bits (59), Expect = 4.9, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 18/70 (25%) Query: 27 FEPIVSL---PEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEK 83 FEP V P+ ++ +EE F A LFRFASE +L V+L E Sbjct: 370 FEPTVLTGVKPDMDVA-----KEETFGPLAPLFRFASEEEL----------VRLANDTEF 414 Query: 84 GAIRLLMRRD 93 G L RD Sbjct: 415 GLAAYLYSRD 424 >4US5-D nrPDB Length = 338 Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 115 GSDRAWVWNTHADFADECPKPELLAIRF 142 G +R WV HA+ + P PE+L R Sbjct: 39 GYERFWVAEHHAEIFNAVPAPEILIARI 66 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1K5G-B nrPDB 277 2e-75 4L6E-A nrPDB 214 3e-56 5CLQ-B nrPDB 201 2e-52 5DHA-B nrPDB 199 6e-52 1RRP-B nrPDB 197 3e-51 3M1I-B nrPDB 196 4e-51 1XKE-A nrPDB 173 3e-44 2CRF-A nrPDB 100 5e-22 3OAN-A nrPDB 99 1e-21 3WYF-B nrPDB 89 1e-18 Sequences not found previously or not previously below threshold: 2Y8F-A nrPDB 90 6e-19 2EC1-A nrPDB 45 2e-05 6HV9-A nrPDB 37 0.008 4WSF-A nrPDB 33 0.093 5WGG-A nrPDB 29 1.2 3MJF-A nrPDB 29 1.6 2GWN-A nrPDB 28 2.2 3SR0-A nrPDB 28 2.3 1ZI7-A nrPDB 28 3.3 3JCN-b nrPDB 27 4.1 6BP7-A nrPDB 27 6.4 >1K5G-B nrPDB Length = 201 Score = 277 bits (708), Expect = 2e-75, Method: Composition-based stats. Identities = 201/201 (100%), Positives = 201/201 (100%) Query: 1 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS 60 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS Sbjct: 1 MAAAKDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS 60 Query: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW 120 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW Sbjct: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW 120 Query: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV 180 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV Sbjct: 121 VWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEEREKKAGSGKNDHAEKV 180 Query: 181 AEKLEALSVKEETKEDAEEKQ 201 AEKLEALSVKEETKEDAEEKQ Sbjct: 181 AEKLEALSVKEETKEDAEEKQ 201 >4L6E-A nrPDB Length = 155 Score = 214 bits (544), Expect = 3e-56, Method: Composition-based stats. Identities = 79/146 (54%), Positives = 100/146 (68%), Gaps = 3/146 (2%) Query: 22 NHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHK 81 N D FEPIVSLPE E+K+ EEDEE LFK RAKL+R+ + D+ +WKERG GD+K+L H Sbjct: 12 NEDIHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRW--DRDVSQWKERGVGDIKILWHT 69 Query: 82 EKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIR 141 K R+LMRRD+ K+CANH IT MELKP S+ A VW T +D+AD K E LA+R Sbjct: 70 MKNYYRILMRRDQVFKVCANHVITKTMELKPLNVSNNALVW-TASDYADGEAKVEQLAVR 128 Query: 142 FLNAENAQKFKTKFEECRKEIEEREK 167 F E A FK FEEC++ + + +K Sbjct: 129 FKTKEVADCFKKTFEECQQNLMKLQK 154 >5CLQ-B nrPDB Length = 167 Score = 201 bits (511), Expect = 2e-52, Method: Composition-based stats. Identities = 87/136 (63%), Positives = 103/136 (75%), Gaps = 4/136 (2%) Query: 25 PQFEPIVSLP-EQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEK 83 P FEP+V LP + E+KT EEDEEE F RAKLFRF E+ EWKERG G+VK+L+HK Sbjct: 16 PHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVES--KEWKERGIGNVKILRHKTS 73 Query: 84 GAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFL 143 G IRLLMRR++ LKICANHYI+P M+L PNAGSDR++VW+ D+ADE PKPE LAIRF Sbjct: 74 GKIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWH-ALDYADELPKPEQLAIRFK 132 Query: 144 NAENAQKFKTKFEECR 159 E A FK KFEE + Sbjct: 133 TPEEAALFKCKFEEAQ 148 >5DHA-B nrPDB Length = 143 Score = 199 bits (506), Expect = 6e-52, Method: Composition-based stats. Identities = 82/149 (55%), Positives = 102/149 (68%), Gaps = 6/149 (4%) Query: 21 SNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKH 80 D FEP+V L + ++KT+EEDEE L+K+RAKLFRF + D EWKERGTGD K LK+ Sbjct: 1 GGSDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRF--DADAKEWKERGTGDCKFLKN 58 Query: 81 KEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAI 140 K+ +R+LMRRDKTLKICANH I P LKPN GSDR+WV+ AD A+ + AI Sbjct: 59 KKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAI 118 Query: 141 RFLNAENAQKFKTKFEECRKEIEEREKKA 169 RF + ENA KFK +FE+ + E KKA Sbjct: 119 RFGSKENADKFKEEFEKAQ----EINKKA 143 >1RRP-B nrPDB Length = 134 Score = 197 bits (500), Expect = 3e-51, Method: Composition-based stats. Identities = 86/135 (63%), Positives = 102/135 (75%), Gaps = 4/135 (2%) Query: 26 QFEPIVSLP-EQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKG 84 FEP+V LP + E+KT EEDEEE F RAKLFRF E+ EWKERG G+VK+L+HK G Sbjct: 1 HFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVES--KEWKERGIGNVKILRHKTSG 58 Query: 85 AIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLN 144 IRLLMRR++ LKICANHYI+P M+L PNAGSDR++VW+ D+ADE PKPE LAIRF Sbjct: 59 KIRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWH-ALDYADELPKPEQLAIRFKT 117 Query: 145 AENAQKFKTKFEECR 159 E A FK KFEE + Sbjct: 118 PEEAALFKCKFEEAQ 132 >3M1I-B nrPDB Length = 191 Score = 196 bits (499), Expect = 4e-51, Method: Composition-based stats. Identities = 83/156 (53%), Positives = 108/156 (69%), Gaps = 3/156 (1%) Query: 5 KDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDL 64 +DT E+ ++ ES D FEP+V L + ++KT+EEDEE L+K+RAKLFRF + D Sbjct: 34 EDTKEETKKEGDDAPES-PDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRF--DADA 90 Query: 65 PEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNT 124 EWKERGTGD K LK+K+ +R+LMRRDKTLKICANH I P LKPN GSDR+WV+ Sbjct: 91 KEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYAC 150 Query: 125 HADFADECPKPELLAIRFLNAENAQKFKTKFEECRK 160 AD A+ + AIRF + ENA KFK +FE+ ++ Sbjct: 151 TADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQE 186 >1XKE-A nrPDB Length = 130 Score = 173 bits (439), Expect = 3e-44, Method: Composition-based stats. Identities = 63/126 (50%), Positives = 91/126 (72%), Gaps = 3/126 (2%) Query: 40 TLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKIC 99 + EEDE+ L+ R KLFRF +E + +WKERG G++K+LK++ G +R+LMRR++ LK+C Sbjct: 2 SGEEDEKVLYSQRVKLFRFDAE--VSQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVC 59 Query: 100 ANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECR 159 ANH+IT M LKP +GSDRAW+W +DF+D K E LA +F E A++FK KFEEC+ Sbjct: 60 ANHWITTTMNLKPLSGSDRAWMW-LASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQ 118 Query: 160 KEIEER 165 + + + Sbjct: 119 RLLLDI 124 >2CRF-A nrPDB Length = 150 Score = 100 bits (248), Expect = 5e-22, Method: Composition-based stats. Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 9/112 (8%) Query: 33 LPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKL--LKHKEKGAI--RL 88 L + E+ T EE E + +M+ KLF F + W ERG G ++L + + G + RL Sbjct: 14 LEKVEVITGEEAESNVLQMQCKLFVF--DKTSQSWVERGRGLLRLNDMASTDDGTLQSRL 71 Query: 89 LMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAI 140 +MR +L++ N + M++ + S+++ + T D D+ K L++ Sbjct: 72 VMRTQGSLRLILNTKLWAQMQI--DKASEKS-IHITAMDTEDQGVKVFLISA 120 >3OAN-A nrPDB Length = 130 Score = 99.1 bits (245), Expect = 1e-21, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 9/126 (7%) Query: 40 TLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEK-GAIRLLMRRDKTLKI 98 EE+EE LF +AKL F ++D + RG G++KLL+ K+ G +R+LMR + + Sbjct: 5 NGEENEEVLFCEKAKLLIF--DSDTKGYTSRGVGELKLLRKKDDKGKVRVLMRSEGMGHV 62 Query: 99 CANHYITPMMELKPNAGSDRAWV-WNTHADFADECPKPELLAIRFLNAENAQKFKTKFEE 157 N + + +P + + W D K E I+ + ++ + Sbjct: 63 LLNTSVVKSFKYQPIDADNENLIKWPIITD-----GKLETFIIKVKQKADGRRLVGAVAD 117 Query: 158 CRKEIE 163 ++ +E Sbjct: 118 AQQAME 123 >2Y8F-A nrPDB Length = 138 Score = 90.2 bits (222), Expect = 6e-19, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 9/110 (8%) Query: 35 EQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKL--LKHKEKGAI--RLLM 90 + E+ T EE E + +M+ KLF F + W ERG G ++L + + G + RL+M Sbjct: 4 KVEVITGEEAESNVLQMQCKLFVF--DKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVM 61 Query: 91 RRDKTLKICANHYITPMMELKPNAGSDRAWVWNTHADFADECPKPELLAI 140 R +L++ N + M++ + S+++ + T D D+ K L++ Sbjct: 62 RTQGSLRLILNTKLWAQMQI--DKASEKS-IRITAMDTEDQGVKVFLISA 108 >3WYF-B nrPDB Length = 238 Score = 89.1 bits (219), Expect = 1e-18, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 5/151 (3%) Query: 4 AKDTHEDHDTST-ENTDESNHDPQFEPI-VSLPEQEIKTLEEDEEELFKMRAKLFRFASE 61 A D +D S E ++ D + +P + L +QE+K+ EE EE ++++ AKL++ + Sbjct: 80 ATDVDKDKVHSGSEQLANASEDTKDKPKPLKLQKQEVKSGEESEECIYQVNAKLYQLS-- 137 Query: 62 NDLPEWKERGTGDVKLLKHKEKG-AIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAW 120 N WKERG G +K+ K K+ R++MR LK+ N + ++ Sbjct: 138 NIKEGWKERGVGIIKINKSKDDVEKTRIVMRSRGILKVILNIQLVKGFTVQKGFTGSLQS 197 Query: 121 VWNTHADFADECPKPELLAIRFLNAENAQKF 151 D+ P AI+ E + Sbjct: 198 EKFIRLLAVDDNGDPAQYAIKTGKKETTDEL 228 >2EC1-A nrPDB Length = 125 Score = 45.2 bits (105), Expect = 2e-05, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 10/118 (8%) Query: 40 TLE-EDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTL-K 97 + E ++E+ + + KLF + +N E+KE+G G + LK +LL+R D L Sbjct: 6 SGEVKEEDAFYSKKCKLF-YKKDN---EFKEKGIGTLH-LKPTANQKTQLLVRADTNLGN 60 Query: 98 ICANHYITPMMELKPNAGSDRAWVWNTHADFADEC--PKPELLAIRFLNAENAQKFKT 153 I N I P M G + + DE P + IR +E+A + Sbjct: 61 ILLNVLIPPNMPCT-RTGKNNVLIVCVPNPPIDEKNATMPVTMLIRVKTSEDADELHK 117 >6HV9-A nrPDB Length = 914 Score = 36.7 bits (83), Expect = 0.008, Method: Composition-based stats. Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 13/101 (12%) Query: 36 QEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKH----KEKGAIRLLMR 91 +IK E F +KL+R S+ +ERG + LL+ K G IRLL Sbjct: 243 VDIKEDINFEFVYFTDISKLYRRLSQETTKLKEERGLQFLLLLQSPFITKLLGTIRLL-N 301 Query: 92 RDKTLKICANHYITPMMELKP--------NAGSDRAWVWNT 124 + +K+ N + P + +P + S +W+ + Sbjct: 302 QMPIVKLSLNEVLLPQLNWQPTLLKKLVNHVLSSGSWISHL 342 >4WSF-A nrPDB Length = 122 Score = 32.8 bits (73), Expect = 0.093, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 13/108 (12%) Query: 52 RAKLFRFASENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELK 111 R KL+ +E +W +RGTG V + I LL+R + + I P + Sbjct: 7 RVKLYALNAER---QWDDRGTGHVSSTYVERLKGISLLVRAESDGSLLLESKIQPDTAYQ 63 Query: 112 PNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECR 159 D VW+ LA+ F + K + + Sbjct: 64 KQ--QDTLIVWS--------EGDNFDLALSFQEKAGCDEIWEKICQVQ 101 >5WGG-A nrPDB Length = 453 Score = 29.4 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 4/65 (6%) Query: 7 THEDHDTSTEN---TDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKL-FRFASEN 62 T E+ D S + DE EP+V+ + EED LF+ KL + + Sbjct: 260 TRENMDFSNDVLHLADEGFRQISVEPVVAAKDSGYDLREEDLPRLFEEYEKLAYEYVKRR 319 Query: 63 DLPEW 67 W Sbjct: 320 KEGNW 324 >3MJF-A nrPDB Length = 431 Score = 29.0 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 41/147 (27%), Gaps = 18/147 (12%) Query: 7 THEDHDTSTENTDESN------HDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFAS 60 T E+ +T+ + N H E + E + + E L Sbjct: 163 TQEEAETAVNDMLAGNAFGDAGHRIVVEEFLDGEEASFIVMVDGENVL-----------P 211 Query: 61 ENDLPEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGS-DRA 119 + K G GD + D + + I P + G+ Sbjct: 212 MATSQDHKRVGDGDTGPNTGGMGAYSPAPVVTDDVHQRVMDQVIWPTVRGMAAEGNIYTG 271 Query: 120 WVWNTHADFADECPKPELLAIRFLNAE 146 +++ AD PK RF + E Sbjct: 272 FLYAGLMISADGQPKVIEFNCRFGDPE 298 >2GWN-A nrPDB Length = 452 Score = 28.2 bits (61), Expect = 2.2, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 16/42 (38%) Query: 24 DPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLP 65 D F P++ E ++ E E +M A+L + Sbjct: 207 DIHFHPLIRSEEACYRSSAEAVELAERMNARLHILHLSTEKE 248 >3SR0-A nrPDB Length = 206 Score = 28.2 bits (61), Expect = 2.3, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 25/54 (46%) Query: 19 DESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGT 72 E+ + P ++ E+D+ E+ K R +++R + + +K++G Sbjct: 128 PETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKRLEVYREQTAPLIEYYKKKGI 181 >1ZI7-A nrPDB Length = 406 Score = 27.8 bits (60), Expect = 3.3, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 21/124 (16%) Query: 52 RAKLFRFASENDLPE---WKERG--TGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITP 106 +A++++ + ++ E + G +G K++K +K RL +I A H Sbjct: 219 KARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKKEESRLFY---DAARIPAEHLNVK 275 Query: 107 MMELKPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKTKFEECRKEIEERE 166 +E + S +AW D A AI+ + K KT+ EE ++E+ + E Sbjct: 276 PLEEQHPLESRKAWY-----DVAG--------AIKLGDFNLIAKTKTELEETQRELRKEE 322 Query: 167 KKAG 170 + G Sbjct: 323 EAKG 326 >3JCN-b nrPDB Length = 890 Score = 27.5 bits (59), Expect = 4.1, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 5/61 (8%) Query: 145 AENAQKFKTKF-EECRKEIEEREKKAGS----GKNDHAEKVAEKLEALSVKEETKEDAEE 199 E A++ K + E+ ++E E++K + KN AEK + EA +K + +E+A Sbjct: 134 REAAEQAKREAAEQAKREAAEKDKVSNQQDDMTKNAQAEKARREQEAAELKRKAEEEARR 193 Query: 200 K 200 K Sbjct: 194 K 194 >6BP7-A nrPDB Length = 934 Score = 26.7 bits (57), Expect = 6.4, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Query: 130 DECPKPELLAIRFLN--AENAQKFK-TKFEECRKEIEEREKKAGSGKNDHAEKVAEKLEA 186 D + LAI E A K + + E+ + ER+K + + A K +LEA Sbjct: 725 DALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARGRLERQKILDQSEAEKARKELLELEA 784 Query: 187 LSVKEET 193 +S+ E+ Sbjct: 785 MSMAVES 791 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.300 0.123 0.317 Lambda K H 0.267 0.0380 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,168,732 Number of Sequences: 36641 Number of extensions: 265912 Number of successful extensions: 882 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 28 Number of HSP's that attempted gapping in prelim test: 759 Number of HSP's gapped (non-prelim): 113 length of query: 201 length of database: 10,336,785 effective HSP length: 92 effective length of query: 109 effective length of database: 6,965,813 effective search space: 759273617 effective search space used: 759273617 T: 11 A: 40 X1: 16 ( 6.9 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.2 bits) S2: 56 (26.3 bits)