BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P43321 (101 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6BK8-g nrPDB 207 7e-55 3JB9-D nrPDB 121 7e-29 6ID1-a nrPDB 108 8e-25 6QDV-d nrPDB 106 2e-24 1D3B-A nrPDB 91 1e-19 6QW6-64 nrPDB 65 9e-12 4EMH-A nrPDB 55 5e-09 4C8Q-D nrPDB 43 3e-05 4M75-G nrPDB 43 3e-05 6ASO-D nrPDB 43 3e-05 5ZWM-s nrPDB 43 4e-05 4XQ3-A nrPDB 42 5e-05 5MKL-A1 nrPDB 40 3e-04 3JB9-F nrPDB 37 0.001 4WZJ-C nrPDB 37 0.002 5XJU-A nrPDB 36 0.004 5Z58-f nrPDB 35 0.009 6QDV-f nrPDB 35 0.009 1N9R-A nrPDB 34 0.013 6QX9-62 nrPDB 32 0.091 3SWN-B nrPDB 31 0.12 5VSU-F nrPDB 31 0.13 5GMK-m nrPDB 30 0.23 4EMK-A nrPDB 29 0.47 3SWN-A nrPDB 29 0.52 6QX9-66 nrPDB 28 0.87 1TH7-A nrPDB 27 1.5 4Y0W-A nrPDB 27 1.7 1LJO-A nrPDB 26 3.8 1XHX-A nrPDB 25 6.0 2DB3-A nrPDB 25 6.2 5UCZ-A nrPDB 25 7.2 1SM1-E nrPDB 25 7.8 1NWX-E nrPDB 25 10.0 >6BK8-g nrPDB Length = 101 Score = 207 bits (527), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 101/101 (100%), Positives = 101/101 (100%) Query: 1 MTMNGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMD 60 MTMNGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMD Sbjct: 1 MTMNGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMD 60 Query: 61 QIFVRGSQIKFIVVPDLLKNAPLFKKNSSRPMPPIRGPKRR 101 QIFVRGSQIKFIVVPDLLKNAPLFKKNSSRPMPPIRGPKRR Sbjct: 61 QIFVRGSQIKFIVVPDLLKNAPLFKKNSSRPMPPIRGPKRR 101 >3JB9-D nrPDB Length = 97 Score = 121 bits (303), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 51/95 (53%), Positives = 75/95 (78%), Gaps = 1/95 (1%) Query: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVR 65 + +KLL+E QGHIV++EL G+TYRGKL+E+ED+MN Q+RD+ T G V+H+DQ+++R Sbjct: 3 LCIKLLHETQGHIVTMELENGSTYRGKLIEAEDNMNCQMRDISVTARDGRVSHLDQVYIR 62 Query: 66 GSQIKFIVVPDLLKNAPLFKKNSSRPMP-PIRGPK 99 GS I+F++VPD+L+NAP+FK R +P P RG + Sbjct: 63 GSHIRFLIVPDMLRNAPMFKVGPGRSVPLPTRGRR 97 >6ID1-a nrPDB Length = 126 Score = 108 bits (269), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 45/95 (47%), Positives = 71/95 (74%), Gaps = 2/95 (2%) Query: 5 GIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFV 64 G+P+K+L+EA+GHIV+ E TG YRGKL+E+ED+MN Q+ ++ T G V ++Q+++ Sbjct: 4 GVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQVYI 63 Query: 65 RGSQIKFIVVPDLLKNAPLFK--KNSSRPMPPIRG 97 RGS+I+F+++PD+LKNAP+ K KN ++ RG Sbjct: 64 RGSKIRFLILPDMLKNAPMLKSMKNKNQGSGAGRG 98 >6QDV-d nrPDB Length = 84 Score = 106 bits (264), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 41/81 (50%), Positives = 65/81 (80%) Query: 5 GIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFV 64 G+P+K+L+EA+GHIV+ E TG YRGKL+E+ED+MN Q+ ++ T G V ++Q+++ Sbjct: 3 GVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQVYI 62 Query: 65 RGSQIKFIVVPDLLKNAPLFK 85 RGS+I+F+++PD+LKNAP+ K Sbjct: 63 RGSKIRFLILPDMLKNAPMLK 83 >1D3B-A nrPDB Length = 75 Score = 90.9 bits (224), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 34/72 (47%), Positives = 56/72 (77%) Query: 5 GIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFV 64 G+P+K+L+EA+GHIV+ E TG YRGKL+E+ED+MN Q+ ++ T G V ++Q+++ Sbjct: 4 GVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQVYI 63 Query: 65 RGSQIKFIVVPD 76 RG +I+F+++PD Sbjct: 64 RGCKIRFLILPD 75 >6QW6-64 nrPDB Length = 139 Score = 64.7 bits (156), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Query: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQG-AVTHMDQIFV 64 +P+ LL AQ H + +EL G TY G LV ++ MN+ LR+VI T G M + ++ Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 61 Query: 65 RGSQIKFIVVPD 76 RGS IK++ +PD Sbjct: 62 RGSTIKYLRIPD 73 >4EMH-A nrPDB Length = 105 Score = 55.5 bits (132), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Query: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQG-AVTHMDQIFV 64 +P+ LLN QG + +EL G T+ G L ++ MN+ LR+VI T P G + + ++ Sbjct: 16 LPLTLLNATQGRPILVELKNGETFNGHLENCDNYMNLTLREVIRTMPDGDKFFRLPECYI 75 Query: 65 RGSQIKFIVVPD 76 RG+ IK++ + D Sbjct: 76 RGNNIKYLRIQD 87 >4C8Q-D nrPDB Length = 114 Score = 43.1 bits (100), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 11/82 (13%) Query: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMD----- 60 +P+ LL A+G + +EL G +G L ++ MN+ L +V + A+ D Sbjct: 2 LPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESS 61 Query: 61 ------QIFVRGSQIKFIVVPD 76 +I++RG+ IKFI + D Sbjct: 62 KAVKLNEIYIRGTFIKFIKLQD 83 >4M75-G nrPDB Length = 122 Score = 43.1 bits (100), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 11/82 (13%) Query: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMD----- 60 +P+ LL A+G + +EL G +G L ++ MN+ L +V + A+ D Sbjct: 31 LPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESS 90 Query: 61 ------QIFVRGSQIKFIVVPD 76 +I++RG+ IKFI + D Sbjct: 91 KAVKLNEIYIRGTFIKFIKLQD 112 >6ASO-D nrPDB Length = 93 Score = 42.7 bits (99), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 11/82 (13%) Query: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMD----- 60 +P+ LL A+G + +EL G +G L ++ MN+ L +V + A+ D Sbjct: 2 LPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESS 61 Query: 61 ------QIFVRGSQIKFIVVPD 76 +I++RG+ IKFI + D Sbjct: 62 KAVKLNEIYIRGTFIKFIKLQD 83 >5ZWM-s nrPDB Length = 187 Score = 42.7 bits (99), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 11/82 (13%) Query: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMD----- 60 +P+ LL A+G + +EL G +G L ++ MN+ L +V + A+ D Sbjct: 2 LPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESS 61 Query: 61 ------QIFVRGSQIKFIVVPD 76 +I++RG+ IKFI + D Sbjct: 62 KAVKLNEIYIRGTFIKFIKLQD 83 >4XQ3-A nrPDB Length = 91 Score = 42.4 bits (98), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 8/73 (10%) Query: 7 PVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVI-----ATEPQGAVTHMDQ 61 P+K L A IV ++L G+ Y GKL +++ +MN+ LRD +EP V + Sbjct: 12 PLKSLRTAINRIVLVKLKDGSEYIGKLEQTDGTMNLVLRDCTEIREGTSEP---VAKYGR 68 Query: 62 IFVRGSQIKFIVV 74 + +RGS I FI V Sbjct: 69 VLIRGSNILFISV 81 >5MKL-A1 nrPDB Length = 87 Score = 39.7 bits (91), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Query: 7 PVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGA--VTHMDQIFV 64 P+K L A IV ++L G Y G+L +S+ +MN+ L+D + V ++ + Sbjct: 8 PLKSLKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEYREGTSDPVAKYGRVLI 67 Query: 65 RGSQIKFIVV 74 RGS I FI + Sbjct: 68 RGSNILFISI 77 >3JB9-F nrPDB Length = 117 Score = 37.4 bits (85), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 40/84 (47%) Query: 8 VKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRGS 67 V+ L + VS+EL G G + + MN L+ V T ++ + +RG+ Sbjct: 4 VRFLMKLTNETVSIELKNGTIVHGTITSVDMQMNTHLKAVKMTVKGREPVPVETLSIRGN 63 Query: 68 QIKFIVVPDLLKNAPLFKKNSSRP 91 I++ ++PD L L +S++P Sbjct: 64 NIRYYILPDSLPLDTLLIDDSTKP 87 >4WZJ-C nrPDB Length = 118 Score = 36.6 bits (83), Expect = 0.002, Method: Compositional matrix adjust. Identities = 19/71 (26%), Positives = 35/71 (49%) Query: 8 VKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRGS 67 V+ L + V++EL G G + + SMN L+ V T ++ + +RG+ Sbjct: 4 VRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGN 63 Query: 68 QIKFIVVPDLL 78 I++ ++PD L Sbjct: 64 NIRYFILPDSL 74 >5XJU-A nrPDB Length = 82 Score = 35.8 bits (81), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/71 (26%), Positives = 35/71 (49%) Query: 8 VKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRGS 67 V+ L + V++EL G G + + SMN L+ V T ++ + +RG+ Sbjct: 4 VRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGN 63 Query: 68 QIKFIVVPDLL 78 I++ ++PD L Sbjct: 64 NIRYFILPDSL 74 >5Z58-f nrPDB Length = 86 Score = 34.7 bits (78), Expect = 0.009, Method: Compositional matrix adjust. Identities = 18/66 (27%), Positives = 31/66 (46%) Query: 7 PVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRG 66 P LN G V ++L G Y+G LV + MN+QL + H+ ++ +R Sbjct: 7 PKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRC 66 Query: 67 SQIKFI 72 + + +I Sbjct: 67 NNVLYI 72 >6QDV-f nrPDB Length = 72 Score = 34.7 bits (78), Expect = 0.009, Method: Compositional matrix adjust. Identities = 18/66 (27%), Positives = 31/66 (46%) Query: 7 PVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRG 66 P LN G V ++L G Y+G LV + MN+QL + H+ ++ +R Sbjct: 4 PKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRC 63 Query: 67 SQIKFI 72 + + +I Sbjct: 64 NNVLYI 69 >1N9R-A nrPDB Length = 93 Score = 34.3 bits (77), Expect = 0.013, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 5/59 (8%) Query: 17 HIVSLELTTGAT-YRGKLVESEDSMNVQLRDVIATEPQGAVTH--MDQIFVRGSQIKFI 72 H V ++L +T YRG LV +++ N+QL + A E V+H + +IF+R + + +I Sbjct: 32 HRVGVKLKFNSTEYRGTLVSTDNYFNLQLNE--AEEFVAGVSHGTLGEIFIRCNNVLYI 88 >6QX9-62 nrPDB Length = 95 Score = 31.6 bits (70), Expect = 0.091, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%) Query: 16 GHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHM---DQIFVRGSQIKFI 72 G V +EL + G L + +N++L D+ T+P+ HM F+RGS ++++ Sbjct: 12 GKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPE-KYPHMLSVKNCFIRGSVVRYV 70 Query: 73 VVP 75 +P Sbjct: 71 QLP 73 >3SWN-B nrPDB Length = 77 Score = 31.2 bits (69), Expect = 0.12, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 6/79 (7%) Query: 1 MTMNGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEP--QGAVTH 58 M M+ P + LN+ G V + L++G Y+G L + MN+ L TE G T+ Sbjct: 1 MGMDSSPNEFLNKVIGKKVLIRLSSGVDYKGILSCLDGYMNLALE---RTEEYVNGKKTN 57 Query: 59 M-DQIFVRGSQIKFIVVPD 76 + F+RG+ + ++ D Sbjct: 58 VYGDAFIRGNNVLYVSALD 76 >5VSU-F nrPDB Length = 88 Score = 30.8 bits (68), Expect = 0.13, Method: Compositional matrix adjust. Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 8/77 (10%) Query: 2 TMNGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGA------ 55 T + + L++ G V+++L +G Y G+L + MNV L ATE + Sbjct: 9 TEGSVTTEFLSDIIGKTVNVKLASGLLYSGRLESIDGFMNVALSS--ATEHYESNNNKLL 66 Query: 56 VTHMDQIFVRGSQIKFI 72 +F+RG+Q+ +I Sbjct: 67 NKFNSDVFLRGTQVMYI 83 >5GMK-m nrPDB Length = 146 Score = 30.0 bits (66), Expect = 0.23, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 27/98 (27%) Query: 8 VKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQ-------------- 53 V L + + V++EL G T G L MN L DV T PQ Sbjct: 4 VNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 Query: 54 -------------GAVTHMDQIFVRGSQIKFIVVPDLL 78 + + I +RG+ I+ I++PD L Sbjct: 64 SLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101 >4EMK-A nrPDB Length = 94 Score = 28.9 bits (63), Expect = 0.47, Method: Compositional matrix adjust. Identities = 15/58 (25%), Positives = 32/58 (55%) Query: 1 MTMNGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTH 58 M+M +P++L+++ G + + + + + G LV +D +N+ L+DV + VT Sbjct: 15 MSMTILPLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEYDTVTGVTE 72 >3SWN-A nrPDB Length = 82 Score = 28.9 bits (63), Expect = 0.52, Method: Compositional matrix adjust. Identities = 15/58 (25%), Positives = 32/58 (55%) Query: 1 MTMNGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTH 58 M+M +P++L+++ G + + + + + G LV +D +N+ L+DV + VT Sbjct: 3 MSMTILPLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEYDTVTGVTE 60 >6QX9-66 nrPDB Length = 80 Score = 28.1 bits (61), Expect = 0.87, Method: Compositional matrix adjust. Identities = 17/66 (25%), Positives = 27/66 (40%) Query: 7 PVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRG 66 P L + G V ++L +G YRG L + MN+ L F+RG Sbjct: 8 PSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRG 67 Query: 67 SQIKFI 72 + + +I Sbjct: 68 NNVLYI 73 >1TH7-A nrPDB Length = 81 Score = 27.3 bits (59), Expect = 1.5, Method: Compositional matrix adjust. Identities = 17/64 (26%), Positives = 30/64 (46%) Query: 9 KLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRGSQ 68 K+L E+ ++V ++L RG L + MN+ L D + G+ + I +RG Sbjct: 12 KVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDN 71 Query: 69 IKFI 72 + I Sbjct: 72 VILI 75 >4Y0W-A nrPDB Length = 232 Score = 27.3 bits (59), Expect = 1.7, Method: Compositional matrix adjust. Identities = 14/30 (46%), Positives = 19/30 (63%) Query: 21 LELTTGATYRGKLVESEDSMNVQLRDVIAT 50 L L A RG+ VE+E ++ V LRD +AT Sbjct: 198 LSLAGFAWARGEGVEAEQALPVYLRDNVAT 227 >1LJO-A nrPDB Length = 77 Score = 26.2 bits (56), Expect = 3.8, Method: Compositional matrix adjust. Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 1/68 (1%) Query: 6 IPVKLLNEAQGHIVSLELTTGAT-YRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFV 64 +P +++ G I+ +E+ GKL +D MN+ L + + + + V + +I + Sbjct: 5 LPNQMVKSMVGKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAMECKGEEKVRSLGEIVL 64 Query: 65 RGSQIKFI 72 RG+ + I Sbjct: 65 RGNNVVLI 72 >1XHX-A nrPDB Length = 575 Score = 25.4 bits (54), Expect = 6.0, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 20/42 (47%) Query: 48 IATEPQGAVTHMDQIFVRGSQIKFIVVPDLLKNAPLFKKNSS 89 I T +GA+ + ++ + KF PD+ P K+N + Sbjct: 370 IKTTSEGAIKQLAKLMLNSLYGKFASNPDVTGKVPYLKENGA 411 >2DB3-A nrPDB Length = 434 Score = 25.4 bits (54), Expect = 6.2, Method: Compositional matrix adjust. Identities = 13/71 (18%), Positives = 30/71 (42%) Query: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVR 65 + +++ NEA+ L G Y G ++ + V+ P + +D+ F+ Sbjct: 141 LAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFIT 200 Query: 66 GSQIKFIVVPD 76 +F+V+ + Sbjct: 201 FEDTRFVVLDE 211 >5UCZ-A nrPDB Length = 307 Score = 25.0 bits (53), Expect = 7.2, Method: Compositional matrix adjust. Identities = 12/42 (28%), Positives = 25/42 (59%), Gaps = 5/42 (11%) Query: 31 GKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRGSQIKFI 72 G+L+ ED+++V +D + P+ A + FV+ SQ+ ++ Sbjct: 136 GRLMGIEDNISVDAKDAVLVNPKEA-----EQFVKESQVDYL 172 >1SM1-E nrPDB Length = 212 Score = 25.0 bits (53), Expect = 7.8, Method: Compositional matrix adjust. Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 14 AQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVT 57 + G+ ++LEL G +R KL MN+ + EP VT Sbjct: 107 SDGYTINLELR-GVGFRAKLTGKALEMNIGYSHPVIIEPPAGVT 149 >1NWX-E nrPDB Length = 185 Score = 24.6 bits (52), Expect = 10.0, Method: Compositional matrix adjust. Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%) Query: 14 AQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVT 57 + G+ ++LEL G +R KL MN+ + EP VT Sbjct: 80 SDGYTINLELR-GVGFRAKLTGKALEMNIGYSHPVIIEPPAGVT 122 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6BK8-g nrPDB 148 5e-37 6ID1-a nrPDB 138 7e-34 3JB9-D nrPDB 135 5e-33 6QDV-d nrPDB 128 5e-31 1D3B-A nrPDB 115 3e-27 6QW6-64 nrPDB 105 4e-24 3JB9-F nrPDB 99 5e-22 4EMH-A nrPDB 96 3e-21 4M75-G nrPDB 88 7e-19 5ZWM-s nrPDB 87 1e-18 6ASO-D nrPDB 86 3e-18 4C8Q-D nrPDB 85 5e-18 5MKL-A1 nrPDB 84 1e-17 4XQ3-A nrPDB 80 1e-16 Sequences not found previously or not previously below threshold: 5XJU-A nrPDB 85 9e-18 4WZJ-C nrPDB 84 1e-17 6QDV-f nrPDB 60 3e-10 5Z58-f nrPDB 60 3e-10 3SWN-B nrPDB 58 8e-10 5GMK-m nrPDB 56 3e-09 6QX9-66 nrPDB 56 3e-09 3JB9-I nrPDB 54 2e-08 1N9R-A nrPDB 52 5e-08 6QX9-62 nrPDB 52 5e-08 1JBM-A nrPDB 51 1e-07 4C8Q-B nrPDB 51 1e-07 1TH7-A nrPDB 50 3e-07 5VSU-B nrPDB 50 3e-07 4N0A-C nrPDB 49 4e-07 5VSU-F nrPDB 47 2e-06 6AH0-t nrPDB 45 1e-05 1LJO-A nrPDB 44 1e-05 3JB9-E nrPDB 44 2e-05 3SWN-A nrPDB 39 5e-04 1M5Q-A nrPDB 39 5e-04 4EMK-A nrPDB 39 5e-04 6AH0-d nrPDB 38 9e-04 4M77-E nrPDB 37 0.002 3TJO-A nrPDB 30 0.29 3NUM-A nrPDB 29 0.36 4TQO-B nrPDB 28 0.81 5LQW-b nrPDB 28 0.90 >6BK8-g nrPDB Length = 101 Score = 148 bits (374), Expect = 5e-37, Method: Composition-based stats. Identities = 101/101 (100%), Positives = 101/101 (100%) Query: 1 MTMNGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMD 60 MTMNGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMD Sbjct: 1 MTMNGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMD 60 Query: 61 QIFVRGSQIKFIVVPDLLKNAPLFKKNSSRPMPPIRGPKRR 101 QIFVRGSQIKFIVVPDLLKNAPLFKKNSSRPMPPIRGPKRR Sbjct: 61 QIFVRGSQIKFIVVPDLLKNAPLFKKNSSRPMPPIRGPKRR 101 >6ID1-a nrPDB Length = 126 Score = 138 bits (347), Expect = 7e-34, Method: Composition-based stats. Identities = 45/96 (46%), Positives = 71/96 (73%), Gaps = 2/96 (2%) Query: 5 GIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFV 64 G+P+K+L+EA+GHIV+ E TG YRGKL+E+ED+MN Q+ ++ T G V ++Q+++ Sbjct: 4 GVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQVYI 63 Query: 65 RGSQIKFIVVPDLLKNAPLFK--KNSSRPMPPIRGP 98 RGS+I+F+++PD+LKNAP+ K KN ++ RG Sbjct: 64 RGSKIRFLILPDMLKNAPMLKSMKNKNQGSGAGRGK 99 >3JB9-D nrPDB Length = 97 Score = 135 bits (339), Expect = 5e-33, Method: Composition-based stats. Identities = 51/95 (53%), Positives = 75/95 (78%), Gaps = 1/95 (1%) Query: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVR 65 + +KLL+E QGHIV++EL G+TYRGKL+E+ED+MN Q+RD+ T G V+H+DQ+++R Sbjct: 3 LCIKLLHETQGHIVTMELENGSTYRGKLIEAEDNMNCQMRDISVTARDGRVSHLDQVYIR 62 Query: 66 GSQIKFIVVPDLLKNAPLFKKNSSRPMP-PIRGPK 99 GS I+F++VPD+L+NAP+FK R +P P RG + Sbjct: 63 GSHIRFLIVPDMLRNAPMFKVGPGRSVPLPTRGRR 97 >6QDV-d nrPDB Length = 84 Score = 128 bits (322), Expect = 5e-31, Method: Composition-based stats. Identities = 41/81 (50%), Positives = 65/81 (80%) Query: 5 GIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFV 64 G+P+K+L+EA+GHIV+ E TG YRGKL+E+ED+MN Q+ ++ T G V ++Q+++ Sbjct: 3 GVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQVYI 62 Query: 65 RGSQIKFIVVPDLLKNAPLFK 85 RGS+I+F+++PD+LKNAP+ K Sbjct: 63 RGSKIRFLILPDMLKNAPMLK 83 >1D3B-A nrPDB Length = 75 Score = 115 bits (289), Expect = 3e-27, Method: Composition-based stats. Identities = 34/72 (47%), Positives = 56/72 (77%) Query: 5 GIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFV 64 G+P+K+L+EA+GHIV+ E TG YRGKL+E+ED+MN Q+ ++ T G V ++Q+++ Sbjct: 4 GVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQVYI 63 Query: 65 RGSQIKFIVVPD 76 RG +I+F+++PD Sbjct: 64 RGCKIRFLILPD 75 >6QW6-64 nrPDB Length = 139 Score = 105 bits (263), Expect = 4e-24, Method: Composition-based stats. Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Query: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQG-AVTHMDQIFV 64 +P+ LL AQ H + +EL G TY G LV ++ MN+ LR+VI T G M + ++ Sbjct: 2 LPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYI 61 Query: 65 RGSQIKFIVVPD 76 RGS IK++ +PD Sbjct: 62 RGSTIKYLRIPD 73 >3JB9-F nrPDB Length = 117 Score = 98.6 bits (244), Expect = 5e-22, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 40/84 (47%) Query: 8 VKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRGS 67 V+ L + VS+EL G G + + MN L+ V T ++ + +RG+ Sbjct: 4 VRFLMKLTNETVSIELKNGTIVHGTITSVDMQMNTHLKAVKMTVKGREPVPVETLSIRGN 63 Query: 68 QIKFIVVPDLLKNAPLFKKNSSRP 91 I++ ++PD L L +S++P Sbjct: 64 NIRYYILPDSLPLDTLLIDDSTKP 87 >4EMH-A nrPDB Length = 105 Score = 95.9 bits (237), Expect = 3e-21, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Query: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQG-AVTHMDQIFV 64 +P+ LLN QG + +EL G T+ G L ++ MN+ LR+VI T P G + + ++ Sbjct: 16 LPLTLLNATQGRPILVELKNGETFNGHLENCDNYMNLTLREVIRTMPDGDKFFRLPECYI 75 Query: 65 RGSQIKFIVVPD 76 RG+ IK++ + D Sbjct: 76 RGNNIKYLRIQD 87 >4M75-G nrPDB Length = 122 Score = 88.2 bits (217), Expect = 7e-19, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 11/84 (13%) Query: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVT-------- 57 +P+ LL A+G + +EL G +G L ++ MN+ L +V + A+ Sbjct: 31 LPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESS 90 Query: 58 ---HMDQIFVRGSQIKFIVVPDLL 78 +++I++RG+ IKFI + D + Sbjct: 91 KAVKLNEIYIRGTFIKFIKLQDNI 114 >5ZWM-s nrPDB Length = 187 Score = 87.4 bits (215), Expect = 1e-18, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 11/84 (13%) Query: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVT-------- 57 +P+ LL A+G + +EL G +G L ++ MN+ L +V + A+ Sbjct: 2 LPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESS 61 Query: 58 ---HMDQIFVRGSQIKFIVVPDLL 78 +++I++RG+ IKFI + D + Sbjct: 62 KAVKLNEIYIRGTFIKFIKLQDNI 85 >6ASO-D nrPDB Length = 93 Score = 86.2 bits (212), Expect = 3e-18, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 11/84 (13%) Query: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVT-------- 57 +P+ LL A+G + +EL G +G L ++ MN+ L +V + A+ Sbjct: 2 LPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESS 61 Query: 58 ---HMDQIFVRGSQIKFIVVPDLL 78 +++I++RG+ IKFI + D + Sbjct: 62 KAVKLNEIYIRGTFIKFIKLQDNI 85 >4C8Q-D nrPDB Length = 114 Score = 85.5 bits (210), Expect = 5e-18, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 11/84 (13%) Query: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVT-------- 57 +P+ LL A+G + +EL G +G L ++ MN+ L +V + A+ Sbjct: 2 LPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAESS 61 Query: 58 ---HMDQIFVRGSQIKFIVVPDLL 78 +++I++RG+ IKFI + D + Sbjct: 62 KAVKLNEIYIRGTFIKFIKLQDNI 85 >5XJU-A nrPDB Length = 82 Score = 84.7 bits (208), Expect = 9e-18, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 36/79 (45%) Query: 8 VKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRGS 67 V+ L + V++EL G G + + SMN L+ V T ++ + +RG+ Sbjct: 4 VRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGN 63 Query: 68 QIKFIVVPDLLKNAPLFKK 86 I++ ++PD L L Sbjct: 64 NIRYFILPDSLPLDTLLVD 82 >5MKL-A1 nrPDB Length = 87 Score = 83.9 bits (206), Expect = 1e-17, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Query: 7 PVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGA--VTHMDQIFV 64 P+K L A IV ++L G Y G+L +S+ +MN+ L+D + V ++ + Sbjct: 8 PLKSLKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKDCTEYREGTSDPVAKYGRVLI 67 Query: 65 RGSQIKFIVV 74 RGS I FI + Sbjct: 68 RGSNILFISI 77 >4WZJ-C nrPDB Length = 118 Score = 83.9 bits (206), Expect = 1e-17, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 36/79 (45%) Query: 8 VKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRGS 67 V+ L + V++EL G G + + SMN L+ V T ++ + +RG+ Sbjct: 4 VRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGN 63 Query: 68 QIKFIVVPDLLKNAPLFKK 86 I++ ++PD L L Sbjct: 64 NIRYFILPDSLPLDTLLVD 82 >4XQ3-A nrPDB Length = 91 Score = 80.5 bits (197), Expect = 1e-16, Method: Composition-based stats. Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%) Query: 7 PVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGA--VTHMDQIFV 64 P+K L A IV ++L G+ Y GKL +++ +MN+ LRD + V ++ + Sbjct: 12 PLKSLRTAINRIVLVKLKDGSEYIGKLEQTDGTMNLVLRDCTEIREGTSEPVAKYGRVLI 71 Query: 65 RGSQIKFIVV 74 RGS I FI V Sbjct: 72 RGSNILFISV 81 >6QDV-f nrPDB Length = 72 Score = 59.7 bits (143), Expect = 3e-10, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%) Query: 7 PVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRG 66 P LN G V ++L G Y+G LV + MN+QL + H+ ++ +R Sbjct: 4 PKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRC 63 Query: 67 SQIKFIV 73 + + +I Sbjct: 64 NNVLYIR 70 >5Z58-f nrPDB Length = 86 Score = 59.7 bits (143), Expect = 3e-10, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 31/67 (46%) Query: 7 PVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRG 66 P LN G V ++L G Y+G LV + MN+QL + H+ ++ +R Sbjct: 7 PKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLGEVLIRC 66 Query: 67 SQIKFIV 73 + + +I Sbjct: 67 NNVLYIR 73 >3SWN-B nrPDB Length = 77 Score = 58.1 bits (139), Expect = 8e-10, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 33/76 (43%) Query: 1 MTMNGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMD 60 M M+ P + LN+ G V + L++G Y+G L + MN+ L Sbjct: 1 MGMDSSPNEFLNKVIGKKVLIRLSSGVDYKGILSCLDGYMNLALERTEEYVNGKKTNVYG 60 Query: 61 QIFVRGSQIKFIVVPD 76 F+RG+ + ++ D Sbjct: 61 DAFIRGNNVLYVSALD 76 >5GMK-m nrPDB Length = 146 Score = 56.2 bits (134), Expect = 3e-09, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 38/108 (35%), Gaps = 27/108 (25%) Query: 8 VKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQ------ 61 V L + + V++EL G T G L MN L DV T PQ + ++ Sbjct: 4 VNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 Query: 62 ---------------------IFVRGSQIKFIVVPDLLKNAPLFKKNS 88 I +RG+ I+ I++PD L L Sbjct: 64 SLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVDQK 111 >6QX9-66 nrPDB Length = 80 Score = 56.2 bits (134), Expect = 3e-09, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 27/69 (39%) Query: 7 PVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRG 66 P L + G V ++L +G YRG L + MN+ L F+RG Sbjct: 8 PSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRG 67 Query: 67 SQIKFIVVP 75 + + +I Sbjct: 68 NNVLYISTQ 76 >3JB9-I nrPDB Length = 78 Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 27/66 (40%) Query: 7 PVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRG 66 P L G V + L G Y+G L + MN+QL + + +I +R Sbjct: 8 PKPFLQGLIGKPVLVRLKWGQEYKGTLQSVDSYMNLQLLNAEELVDGVKTGDLGEILIRC 67 Query: 67 SQIKFI 72 + + ++ Sbjct: 68 NNVLWV 73 >1N9R-A nrPDB Length = 93 Score = 52.3 bits (124), Expect = 5e-08, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 7 PVKLLNEAQGHIVSLELT-TGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVR 65 P L H V ++L YRG LV +++ N+QL + + + +IF+R Sbjct: 22 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEEFVAGVSHGTLGEIFIR 81 Query: 66 GSQIKFIV 73 + + +I Sbjct: 82 CNNVLYIR 89 >6QX9-62 nrPDB Length = 95 Score = 52.3 bits (124), Expect = 5e-08, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 2/84 (2%) Query: 9 KLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAV--THMDQIFVRG 66 G V +EL + G L + +N++L D+ T+P+ + F+RG Sbjct: 5 SFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRG 64 Query: 67 SQIKFIVVPDLLKNAPLFKKNSSR 90 S ++++ +P + L + + + Sbjct: 65 SVVRYVQLPADEVDTQLLQDAARK 88 >1JBM-A nrPDB Length = 86 Score = 50.8 bits (120), Expect = 1e-07, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 27/67 (40%) Query: 7 PVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRG 66 P+ L + V ++L +RG L + MN+ L D E + + +RG Sbjct: 14 PLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEELEDGEVTRRLGTVLIRG 73 Query: 67 SQIKFIV 73 I +I Sbjct: 74 DNIVYIS 80 >4C8Q-B nrPDB Length = 105 Score = 50.8 bits (120), Expect = 1e-07, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 38/90 (42%), Gaps = 2/90 (2%) Query: 9 KLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAV--THMDQIFVRG 66 V +EL +G L + +N++L ++ T+ + + IF+RG Sbjct: 15 SFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPHLGSVRNIFIRG 74 Query: 67 SQIKFIVVPDLLKNAPLFKKNSSRPMPPIR 96 S ++++ + + + L + + R + R Sbjct: 75 STVRYVYLNKNMVDTNLLQDATRREVMTER 104 >1TH7-A nrPDB Length = 81 Score = 49.7 bits (117), Expect = 3e-07, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 30/65 (46%) Query: 9 KLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRGSQ 68 K+L E+ ++V ++L RG L + MN+ L D + G+ + I +RG Sbjct: 12 KVLAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEIQSDGSGKKLGTIVIRGDN 71 Query: 69 IKFIV 73 + I Sbjct: 72 VILIS 76 >5VSU-B nrPDB Length = 98 Score = 49.7 bits (117), Expect = 3e-07, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 38/90 (42%), Gaps = 2/90 (2%) Query: 9 KLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAV--THMDQIFVRG 66 V +EL +G L + +N++L ++ T+ + + IF+RG Sbjct: 8 SFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPHLGSVRNIFIRG 67 Query: 67 SQIKFIVVPDLLKNAPLFKKNSSRPMPPIR 96 S ++++ + + + L + + R + R Sbjct: 68 STVRYVYLNKNMVDTNLLQDATRREVMTER 97 >4N0A-C nrPDB Length = 109 Score = 49.3 bits (116), Expect = 4e-07, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 38/90 (42%), Gaps = 2/90 (2%) Query: 9 KLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAV--THMDQIFVRG 66 V +EL +G L + +N++L ++ T+ + + IF+RG Sbjct: 19 SFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEKKYPHLGSVRNIFIRG 78 Query: 67 SQIKFIVVPDLLKNAPLFKKNSSRPMPPIR 96 S ++++ + + + L + + R + R Sbjct: 79 STVRYVYLNKNMVDTNLLQDATRREVMTER 108 >5VSU-F nrPDB Length = 88 Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 4/76 (5%) Query: 2 TMNGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQ----GAVT 57 T + + L++ G V+++L +G Y G+L + MNV L Sbjct: 9 TEGSVTTEFLSDIIGKTVNVKLASGLLYSGRLESIDGFMNVALSSATEHYESNNNKLLNK 68 Query: 58 HMDQIFVRGSQIKFIV 73 +F+RG+Q+ +I Sbjct: 69 FNSDVFLRGTQVMYIS 84 >6AH0-t nrPDB Length = 91 Score = 44.6 bits (104), Expect = 1e-05, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 3/71 (4%) Query: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIA---TEPQGAVTHMDQI 62 +P++L+++ G + + + + G L+ +D +N+ L DV T +T +DQI Sbjct: 13 LPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRRITKLDQI 72 Query: 63 FVRGSQIKFIV 73 + G+ I +V Sbjct: 73 LLNGNNITMLV 83 >1LJO-A nrPDB Length = 77 Score = 44.3 bits (103), Expect = 1e-05, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Query: 6 IPVKLLNEAQGHIVSLELTTGA-TYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFV 64 +P +++ G I+ +E+ GKL +D MN+ L + + + + V + +I + Sbjct: 5 LPNQMVKSMVGKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAMECKGEEKVRSLGEIVL 64 Query: 65 RGSQIKFIVVPD 76 RG+ + I + Sbjct: 65 RGNNVVLIQPQE 76 >3JB9-E nrPDB Length = 147 Score = 43.9 bits (102), Expect = 2e-05, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 33/100 (33%), Gaps = 15/100 (15%) Query: 13 EAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATE-------PQGAVTHMDQ---- 61 H +++ G T+ G+L+ + MN+ L D P +V + Sbjct: 8 SLLNHSLNVTTKDGRTFVGQLLAFDGFMNLVLSDCQEYRHIKKQNVPSNSVYEEKRMLGL 67 Query: 62 IFVRGSQIKFIVVPDLLKNAPLFK----KNSSRPMPPIRG 97 + +RG I + V P + P RG Sbjct: 68 VILRGEFIVSLSVQGPPPMDPSMRGSLLSGPGVARPAGRG 107 >3SWN-A nrPDB Length = 82 Score = 38.9 bits (89), Expect = 5e-04, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 1 MTMNGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVT-HM 59 M+M +P++L+++ G + + + + + G LV +D +N+ L+DV + VT Sbjct: 3 MSMTILPLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEYDTVTGVTEKH 62 Query: 60 DQIFVRGSQIKFIV 73 ++ + G+ + ++ Sbjct: 63 SEMLLNGNGMCMLI 76 >1M5Q-A nrPDB Length = 130 Score = 38.9 bits (89), Expect = 5e-04, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 19/38 (50%) Query: 11 LNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVI 48 LN G V + L+ G Y+G L ++ +N+ L + Sbjct: 5 LNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANAS 42 >4EMK-A nrPDB Length = 94 Score = 38.9 bits (89), Expect = 5e-04, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 1 MTMNGIPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVT-HM 59 M+M +P++L+++ G + + + + + G LV +D +N+ L+DV + VT Sbjct: 15 MSMTILPLELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTEYDTVTGVTEKH 74 Query: 60 DQIFVRGSQIKFIV 73 ++ + G+ + ++ Sbjct: 75 SEMLLNGNGMCMLI 88 >6AH0-d nrPDB Length = 76 Score = 38.1 bits (87), Expect = 9e-04, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 28/62 (45%) Query: 11 LNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQIFVRGSQIK 70 L + +SL+L G +G L + MN+ + + + G ++ + +RG+ I Sbjct: 9 LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSII 68 Query: 71 FI 72 + Sbjct: 69 ML 70 >4M77-E nrPDB Length = 93 Score = 36.9 bits (84), Expect = 0.002, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 36/76 (47%), Gaps = 8/76 (10%) Query: 6 IPVKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVI--------ATEPQGAVT 57 +P++++++ V + L + + G LV +D +NV L D + + + + Sbjct: 7 LPLEVIDKTINQKVLIVLQSNREFEGTLVGFDDFVNVILEDAVEWLIDPEDESRNEKVMQ 66 Query: 58 HMDQIFVRGSQIKFIV 73 H ++ + G+ I +V Sbjct: 67 HHGRMLLSGNNIAILV 82 >3TJO-A nrPDB Length = 231 Score = 29.6 bits (65), Expect = 0.29, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 1 MTMNGIPVKLLNEAQG-HIVSLELTTGATYRGKLVESEDSMNVQL 44 ++ +G+ V + H V +EL GATY K+ + ++ ++ L Sbjct: 70 VSEDGLIVTNAHVVTNKHRVKVELKNGATYEAKIKDVDEKADIAL 114 >3NUM-A nrPDB Length = 332 Score = 29.2 bits (64), Expect = 0.36, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 1 MTMNGIPVKLLNEAQG-HIVSLELTTGATYRGKLVESEDSMNVQL 44 ++ +G+ V + H V +EL GATY K+ + ++ ++ L Sbjct: 53 VSEDGLIVTNAHVVTNKHRVKVELKNGATYEAKIKDVDEKADIAL 97 >4TQO-B nrPDB Length = 573 Score = 28.1 bits (61), Expect = 0.81, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 1/44 (2%) Query: 10 LLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQ 53 LN+ GHIV+L TG K+ S+ +M L Sbjct: 125 FLNQLDGHIVALNAKTGEEI-WKMENSDIAMGSTLTGAPFVVKD 167 >5LQW-b nrPDB Length = 196 Score = 28.1 bits (61), Expect = 0.90, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 17/39 (43%) Query: 11 LNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIA 49 L + + + G Y G+L+ + MN+ L + I Sbjct: 12 LANLIDYKLRVLTQDGRVYIGQLMAFDKHMNLVLNECIE 50 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.136 0.347 Lambda K H 0.267 0.0417 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,320,214 Number of Sequences: 36641 Number of extensions: 96942 Number of successful extensions: 344 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 253 Number of HSP's gapped (non-prelim): 85 length of query: 101 length of database: 10,336,785 effective HSP length: 68 effective length of query: 33 effective length of database: 7,845,197 effective search space: 258891501 effective search space used: 258891501 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 53 (25.0 bits)