BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P42830 (114 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2MGS-A nrPDB 160 2e-40 1F9P-A nrPDB 87 1e-18 1NAP-A nrPDB 87 2e-18 1MSH-A nrPDB 85 9e-18 5OB5-A nrPDB 76 3e-15 1MI2-A nrPDB 76 4e-15 1PFN-A nrPDB 75 5e-15 1ROD-A nrPDB 72 8e-14 1PLF-A nrPDB 68 7e-13 4XDX-A nrPDB 65 4e-12 1LV9-A nrPDB 43 3e-05 5CBA-E nrPDB 41 1e-04 2R3Z-A nrPDB 40 3e-04 6EHZ-A nrPDB 37 0.002 5L7M-A nrPDB 35 0.005 2MP1-A nrPDB 34 0.016 1ZXT-A nrPDB 33 0.027 4MHE-A nrPDB 32 0.067 4LMQ-D nrPDB 32 0.067 2N55-A nrPDB 32 0.088 2K04-A nrPDB 32 0.092 4ZKB-B nrPDB 30 0.19 5YAM-A nrPDB 29 0.39 1HHV-A nrPDB 29 0.40 1J9O-A nrPDB 29 0.50 1G2S-A nrPDB 29 0.56 4RWS-C nrPDB 29 0.58 2Q8T-A nrPDB 28 0.79 1RJT-A nrPDB 28 0.83 2Q8R-E nrPDB 28 0.97 1ESR-A nrPDB 28 1.1 2HCC-A nrPDB 28 1.1 1EQT-A nrPDB 27 1.7 2VXW-A nrPDB 27 1.8 5UIW-B nrPDB 27 2.4 5CHX-A nrPDB 27 2.8 3MUD-A nrPDB 27 2.9 2RA4-A nrPDB 26 3.0 2X6L-A nrPDB 26 3.5 1EIG-A nrPDB 26 5.0 6HAU-A nrPDB 25 5.3 3FJ1-A nrPDB 25 7.8 >2MGS-A nrPDB Length = 78 Score = 160 bits (404), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 78/78 (100%), Positives = 78/78 (100%) Query: 37 AGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEA 96 AGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEA Sbjct: 1 AGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEA 60 Query: 97 PFLKKVIQKILDGGNKEN 114 PFLKKVIQKILDGGNKEN Sbjct: 61 PFLKKVIQKILDGGNKEN 78 >1F9P-A nrPDB Length = 85 Score = 87.4 bits (215), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 36/64 (56%), Positives = 53/64 (82%) Query: 46 ELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQK 105 ELRC+C++TT G+HPK I +L+V G C++VEV+A+LK+G++ICLDP+AP +KK++QK Sbjct: 17 ELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQK 76 Query: 106 ILDG 109 L G Sbjct: 77 KLAG 80 >1NAP-A nrPDB Length = 70 Score = 86.7 bits (213), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 36/64 (56%), Positives = 53/64 (82%) Query: 46 ELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQK 105 ELRC+C++TT G+HPK I +L+V G C++VEV+A+LK+G++ICLDP+AP +KK++QK Sbjct: 2 ELRCLCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQK 61 Query: 106 ILDG 109 L G Sbjct: 62 KLAG 65 >1MSH-A nrPDB Length = 72 Score = 84.7 bits (208), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 36/69 (52%), Positives = 54/69 (78%) Query: 41 AAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLK 100 A+V ELRC CLQT QG+HPK I ++ V + GP C++ EV+A+LKNG++ CL+P +P +K Sbjct: 1 ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVK 60 Query: 101 KVIQKILDG 109 K+I+K+L+ Sbjct: 61 KIIEKMLNS 69 >5OB5-A nrPDB Length = 63 Score = 76.3 bits (186), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 33/63 (52%), Positives = 50/63 (79%) Query: 46 ELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQK 105 ELRC CLQT QG+H K I +++V + GP C++ EV+A+LKNG++ CL+P +P +KK+I+K Sbjct: 1 ELRCQCLQTLQGIHLKNIQSVKVKSPGPHCAQTEVIATLKNGQKACLNPASPMVKKIIEK 60 Query: 106 ILD 108 +L Sbjct: 61 MLK 63 >1MI2-A nrPDB Length = 73 Score = 75.9 bits (185), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 37/70 (52%), Positives = 50/70 (71%) Query: 41 AAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLK 100 A V ELRC CL+T V K I +L V GP C++ EV+A+LK G+++CLDPEAP ++ Sbjct: 1 AVVASELRCQCLKTLPRVDFKNIQSLSVTPPGPHCAQTEVIATLKGGQKVCLDPEAPLVQ 60 Query: 101 KVIQKILDGG 110 K+IQKIL+ G Sbjct: 61 KIIQKILNKG 70 >1PFN-A nrPDB Length = 68 Score = 75.5 bits (184), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 31/65 (47%), Positives = 49/65 (75%) Query: 45 RELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQ 104 +ELRC C++TT V P+ I++L+V GP C +++A+LKNG++ICLD +AP KK+I+ Sbjct: 4 KELRCQCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKIIK 63 Query: 105 KILDG 109 K+L+ Sbjct: 64 KLLES 68 >1ROD-A nrPDB Length = 72 Score = 71.6 bits (174), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 29/67 (43%), Positives = 47/67 (70%), Gaps = 1/67 (1%) Query: 45 RELRCVCLQT-TQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVI 103 +ELRC C++T ++ HPK I L+V GP C+ E++ L +G+E+CLDP +P +KK+I Sbjct: 3 KELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPASPIVKKII 62 Query: 104 QKILDGG 110 +K+L+ Sbjct: 63 EKMLNSD 69 >1PLF-A nrPDB Length = 72 Score = 68.2 bits (165), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 28/63 (44%), Positives = 47/63 (74%) Query: 45 RELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQ 104 +L+CVCL+TT G++P+ IS+L+V G C +++A+LK G++ICLD + P KK+I+ Sbjct: 8 EDLQCVCLKTTSGINPRHISSLEVIGAGLHCPSPQLIATLKTGRKICLDQQNPLYKKIIK 67 Query: 105 KIL 107 ++L Sbjct: 68 RLL 70 >4XDX-A nrPDB Length = 70 Score = 65.5 bits (158), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Query: 45 RELRCVCLQT-TQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVI 103 +ELRC C++T ++ HPK I L+V GP C+ E++ L +G+E+CLDP+ ++++V+ Sbjct: 1 KELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPKENWVQRVV 60 Query: 104 QKIL 107 +K L Sbjct: 61 EKFL 64 >1LV9-A nrPDB Length = 77 Score = 43.1 bits (100), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 6/71 (8%) Query: 45 RELRCVCLQ-TTQGVHPKMISNLQVFAIGPQCSKVEVVASL-KNGKEICLDPEAPFLKKV 102 R +RC C+ + Q V+P+ + L++ C +VE++A++ K G++ CL+PE+ K Sbjct: 5 RTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPES----KA 60 Query: 103 IQKILDGGNKE 113 I+ +L +KE Sbjct: 61 IKNLLKAVSKE 71 >5CBA-E nrPDB Length = 88 Score = 40.8 bits (94), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Query: 47 LRCVCLQTTQGVHPK-MISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQ 104 LRC C+Q + P+ I +Q+ G C + E++ KN +C+DP+A +++++++ Sbjct: 10 LRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIVWKKNKSIVCVDPQAEWIQRMME 68 >2R3Z-A nrPDB Length = 68 Score = 39.7 bits (91), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 2/62 (3%) Query: 45 RELRCVCLQTTQG-VHPKMISNLQVFAIGPQCSKVEVVASLK-NGKEICLDPEAPFLKKV 102 R +RC C+ G V + I L++ C +VE++A++K N ++ CL+PE+ +K + Sbjct: 5 RTVRCNCIHIDDGPVRMRAIGKLEIIPASLSCPRVEIIATMKKNDEQRCLNPESKTIKNL 64 Query: 103 IQ 104 ++ Sbjct: 65 MK 66 >6EHZ-A nrPDB Length = 98 Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust. Identities = 18/68 (26%), Positives = 40/68 (58%), Gaps = 3/68 (4%) Query: 47 LRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNG-KEICLDPEAPFLKKVIQK 105 RC C + + +L++ P C+ +++VA LKN +++C+DP+ ++++ ++K Sbjct: 7 YRCPCRFFESHIARANVKHLKILNT-PNCA-LQIVARLKNNNRQVCIDPKLKWIQEYLEK 64 Query: 106 ILDGGNKE 113 L+ G +E Sbjct: 65 ALNKGRRE 72 >5L7M-A nrPDB Length = 88 Score = 35.4 bits (80), Expect = 0.005, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 5/64 (7%) Query: 46 ELRCVC---LQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKV 102 L+C C + T G++ +I +QV G C K EVV K K IC++P A +L+++ Sbjct: 8 NLKCRCSGVISTVVGLN--IIDRIQVTPPGNGCPKTEVVIWTKMKKVICVNPRAKWLQRL 65 Query: 103 IQKI 106 ++ + Sbjct: 66 LRHV 69 >2MP1-A nrPDB Length = 77 Score = 33.9 bits (76), Expect = 0.016, Method: Compositional matrix adjust. Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Query: 51 CLQTTQGVHP-KMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 CL TQ P ++ N I C VV + G+++C P+ P+++++IQ++ Sbjct: 9 CLSVTQKPIPGYIVRNFHYLLIKDGCRVPAVVFTTLRGRQLCAPPDQPWVERIIQRL 65 >1ZXT-A nrPDB Length = 76 Score = 33.1 bits (74), Expect = 0.027, Method: Compositional matrix adjust. Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 59 HPKMISNL-QVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 HP + L + + P C K V+ K G++IC DP ++++++Q++ Sbjct: 18 HPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRL 66 >4MHE-A nrPDB Length = 70 Score = 32.0 bits (71), Expect = 0.067, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Query: 45 RELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVI 103 +EL C+ + T+ + K I + PQC K V+ K G++IC DP +++K I Sbjct: 8 KELCCL-VYTSWQIPQKFIVDYS--ETSPQCPKPGVILLTKRGRQICADPNKKWVQKYI 63 >4LMQ-D nrPDB Length = 61 Score = 32.0 bits (71), Expect = 0.067, Method: Compositional matrix adjust. Identities = 17/62 (27%), Positives = 37/62 (59%), Gaps = 3/62 (4%) Query: 48 RCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNG-KEICLDPEAPFLKKVIQKI 106 RC C V + +L++ P C+ +++VA LKN +++C+DP+ ++++ ++K Sbjct: 1 RCPCRFFESHVARANVKHLKILN-TPNCA-LQIVARLKNNNRQVCIDPKLKWIQEYLEKA 58 Query: 107 LD 108 L+ Sbjct: 59 LN 60 >2N55-A nrPDB Length = 70 Score = 31.6 bits (70), Expect = 0.088, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 3/63 (4%) Query: 47 LRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNG-KEICLDPEAPFLKKVIQK 105 RC C V + +L++ P C+ +++VA LKN +++C+DP+ + ++ ++K Sbjct: 9 YRCPCRFFESHVARANVKHLKILNT-PNCA-LQIVARLKNNNRQVCIDPKCKWCQEYLEK 66 Query: 106 ILD 108 L+ Sbjct: 67 ALN 69 >2K04-A nrPDB Length = 70 Score = 31.6 bits (70), Expect = 0.092, Method: Compositional matrix adjust. Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 3/63 (4%) Query: 47 LRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNG-KEICLDPEAPFLKKVIQK 105 RC C V + +L++ P C+ ++VA LKN +++C+DP+ ++++ ++K Sbjct: 9 YRCPCRFFESHVARANVKHLKILNT-PNCA-CQIVARLKNNNRQVCIDPKLKWIQEYLEK 66 Query: 106 ILD 108 L+ Sbjct: 67 CLN 69 >4ZKB-B nrPDB Length = 75 Score = 30.4 bits (67), Expect = 0.19, Method: Compositional matrix adjust. Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 49 CVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 C T++ + I++ F QCSK V+ K +++C DP +++K + + Sbjct: 10 CCFSYTSRQIPQNFIADY--FETSSQCSKPGVIFLTKRSRQVCADPSEEWVQKYVSDL 65 >5YAM-A nrPDB Length = 69 Score = 29.3 bits (64), Expect = 0.39, Method: Compositional matrix adjust. Identities = 9/40 (22%), Positives = 22/40 (55%) Query: 67 QVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 + F +CS + VV + +++C +PE ++++ I + Sbjct: 27 EYFYTSSKCSNLAVVFVTRRNRQVCANPEKKWVQEYINYL 66 >1HHV-A nrPDB Length = 74 Score = 29.3 bits (64), Expect = 0.40, Method: Compositional matrix adjust. Identities = 11/32 (34%), Positives = 21/32 (65%) Query: 75 CSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 CSK V+ K G+++C D ++KK++Q++ Sbjct: 38 CSKPGVIFLTKRGRQVCADKSKDWVKKLMQQL 69 >1J9O-A nrPDB Length = 93 Score = 28.9 bits (63), Expect = 0.50, Method: Compositional matrix adjust. Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 63 ISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKILDGGNKEN 114 +S ++ + I + S V+ K G ++C DP+A +++ V++ + N N Sbjct: 21 VSRIKTYTI-TEGSLRAVIFITKRGLKVCADPQATWVRDVVRSMDRKSNTRN 71 >1G2S-A nrPDB Length = 71 Score = 28.9 bits (63), Expect = 0.56, Method: Compositional matrix adjust. Identities = 10/29 (34%), Positives = 18/29 (62%) Query: 75 CSKVEVVASLKNGKEICLDPEAPFLKKVI 103 CS+ V+ + K GK++C P +++K I Sbjct: 34 CSQRAVIFTTKRGKKVCTHPRKKWVQKYI 62 >4RWS-C nrPDB Length = 80 Score = 28.9 bits (63), Expect = 0.58, Method: Compositional matrix adjust. Identities = 11/32 (34%), Positives = 21/32 (65%) Query: 75 CSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 CSK V+ K G+++C D ++KK++Q++ Sbjct: 35 CSKPGVIFLTKRGRQVCADKSKDWVKKLMQQL 66 >2Q8T-A nrPDB Length = 74 Score = 28.5 bits (62), Expect = 0.79, Method: Compositional matrix adjust. Identities = 10/44 (22%), Positives = 21/44 (47%) Query: 66 LQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKILDG 109 + + QCSK +V K G +C +P +++ I+ + + Sbjct: 31 MDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN 74 >1RJT-A nrPDB Length = 73 Score = 28.1 bits (61), Expect = 0.83, Method: Compositional matrix adjust. Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 6/68 (8%) Query: 43 VLRELRCVCLQTTQGVHPKMISNLQVFAI---GPQCSKVEVVASLKNGK-EICLDPEAPF 98 + + RC+C+ GV +++++ +I C K+EV+ +LK K + CL+P++ Sbjct: 3 MFKRGRCLCIGP--GVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQ 60 Query: 99 LKKVIQKI 106 + +I+K+ Sbjct: 61 ARLIIKKV 68 >2Q8R-E nrPDB Length = 66 Score = 28.1 bits (61), Expect = 0.97, Method: Compositional matrix adjust. Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Query: 66 LQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKILDGGNKEN 114 + + QCSK +V K G +C +P +++ I+ + KEN Sbjct: 23 MDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDM-----KEN 66 >1ESR-A nrPDB Length = 76 Score = 27.7 bits (60), Expect = 1.1, Method: Compositional matrix adjust. Identities = 10/27 (37%), Positives = 17/27 (62%) Query: 74 QCSKVEVVASLKNGKEICLDPEAPFLK 100 QC K V+ + GKE+C DP+ +++ Sbjct: 35 QCPKEAVIFKTQRGKEVCADPKERWVR 61 >2HCC-A nrPDB Length = 66 Score = 27.7 bits (60), Expect = 1.1, Method: Compositional matrix adjust. Identities = 11/39 (28%), Positives = 21/39 (53%) Query: 68 VFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 F +CSK V+ K G+++C P P ++ ++K+ Sbjct: 23 YFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 61 >1EQT-A nrPDB Length = 68 Score = 27.3 bits (59), Expect = 1.7, Method: Compositional matrix adjust. Identities = 9/40 (22%), Positives = 21/40 (52%) Query: 67 QVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 + F +CS VV + +++C +PE ++++ I + Sbjct: 26 EYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSL 65 >2VXW-A nrPDB Length = 69 Score = 26.9 bits (58), Expect = 1.8, Method: Compositional matrix adjust. Identities = 9/40 (22%), Positives = 21/40 (52%) Query: 67 QVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 + F +CS VV + +++C +PE ++++ I + Sbjct: 27 EYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSL 66 >5UIW-B nrPDB Length = 75 Score = 26.6 bits (57), Expect = 2.4, Method: Compositional matrix adjust. Identities = 9/40 (22%), Positives = 21/40 (52%) Query: 67 QVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 + F +CS VV + +++C +PE ++++ I + Sbjct: 27 EYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSL 66 >5CHX-A nrPDB Length = 214 Score = 26.6 bits (57), Expect = 2.8, Method: Compositional matrix adjust. Identities = 13/28 (46%), Positives = 16/28 (57%) Query: 41 AAVLRELRCVCLQTTQGVHPKMISNLQV 68 A V+REL C CL TT K +L+V Sbjct: 123 AEVIRELICYCLDTTAENQAKNEHHLRV 150 >3MUD-A nrPDB Length = 175 Score = 26.6 bits (57), Expect = 2.9, Method: Compositional matrix adjust. Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%) Query: 41 AAVLRELRCVCLQTTQGVHPKMISNLQ 67 A V+REL C CL TT + K I +L+ Sbjct: 123 AEVIRELICYCLDTT-AKNEKSIDDLE 148 >2RA4-A nrPDB Length = 76 Score = 26.2 bits (56), Expect = 3.0, Method: Compositional matrix adjust. Identities = 10/33 (30%), Positives = 20/33 (60%) Query: 74 QCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 +C + V+ K GKEIC DP+ +++ ++ + Sbjct: 35 RCPQKAVIFRTKLGKEICADPKEKWVQNYMKHL 67 >2X6L-A nrPDB Length = 69 Score = 26.2 bits (56), Expect = 3.5, Method: Compositional matrix adjust. Identities = 9/32 (28%), Positives = 18/32 (56%) Query: 75 CSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 CS+ VV K K++C DP ++++ + + Sbjct: 35 CSQPAVVFQTKRSKQVCADPSESWVQEYVYDL 66 >1EIG-A nrPDB Length = 73 Score = 25.8 bits (55), Expect = 5.0, Method: Compositional matrix adjust. Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Query: 75 CSKVEVVASLKNGKEICLDPEAPFLKKVIQKILDGGNKE 113 C K V+ + K G++ C DP+ ++++ + K LD K+ Sbjct: 32 CLKAGVIFTTKKGQQSCGDPKQEWVQRYM-KNLDAKQKK 69 >6HAU-A nrPDB Length = 273 Score = 25.4 bits (54), Expect = 5.3, Method: Compositional matrix adjust. Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Query: 72 GPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 G Q K + + S +NGK+I LD + L +++ KI Sbjct: 110 GQQYLKNDFIFS-ENGKDIILDTSSALLSQLVHKI 143 >3FJ1-A nrPDB Length = 344 Score = 25.0 bits (53), Expect = 7.8, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 6/58 (10%) Query: 13 GPSSSLCALLVLLLLLTQPGPIASAGPAAAV-----LRELRCVCLQTTQ-GVHPKMIS 64 G S +C L L P+AS GP+ A LR R +CL +Q G P +++ Sbjct: 52 GSSDHVCTYLSYAAELLLGLPVASLGPSVASVYDARLRLDRALCLAVSQSGKSPDIVA 109 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2MGS-A nrPDB 114 8e-27 1F9P-A nrPDB 101 9e-23 1MSH-A nrPDB 99 3e-22 1NAP-A nrPDB 97 1e-21 1MI2-A nrPDB 96 5e-21 1ROD-A nrPDB 95 6e-21 4XDX-A nrPDB 94 1e-20 1PFN-A nrPDB 93 3e-20 1PLF-A nrPDB 93 3e-20 5OB5-A nrPDB 89 4e-19 5CBA-E nrPDB 78 8e-16 2R3Z-A nrPDB 72 8e-14 1LV9-A nrPDB 67 1e-12 Sequences not found previously or not previously below threshold: 5L7M-A nrPDB 52 4e-08 6EHZ-A nrPDB 43 2e-05 2HDL-A nrPDB 43 4e-05 1RJT-A nrPDB 42 6e-05 4MHE-A nrPDB 41 1e-04 1ZXT-A nrPDB 40 3e-04 4LMQ-D nrPDB 39 4e-04 2K04-A nrPDB 38 8e-04 2N55-A nrPDB 37 0.001 2MP1-A nrPDB 36 0.004 1NCV-A nrPDB 36 0.005 2RA4-A nrPDB 35 0.006 4ZKB-B nrPDB 35 0.009 1G2S-A nrPDB 35 0.010 1HHV-A nrPDB 34 0.012 4RWS-C nrPDB 34 0.014 2JYO-A nrPDB 33 0.023 1EIG-A nrPDB 33 0.027 1ESR-A nrPDB 32 0.063 2Q8T-A nrPDB 32 0.085 2Q8R-E nrPDB 32 0.085 1J9O-A nrPDB 31 0.12 2X6L-A nrPDB 30 0.16 2HCC-A nrPDB 30 0.17 1EQT-A nrPDB 30 0.32 1EOT-A nrPDB 29 0.43 4ZLT-F nrPDB 29 0.47 5YAM-A nrPDB 29 0.50 5LTL-A nrPDB 29 0.52 5UIW-B nrPDB 29 0.59 2VXW-A nrPDB 29 0.60 1NR4-A nrPDB 28 0.72 5EKI-A nrPDB 28 1.1 4XT3-B nrPDB 28 1.2 1G91-A nrPDB 28 1.2 4HCS-A nrPDB 27 1.6 2L4N-A nrPDB 27 1.6 1DOL-A nrPDB 27 1.7 5WB2-B nrPDB 27 1.7 2XR1-A nrPDB 27 2.0 1HA6-A nrPDB 26 3.9 5KOR-A nrPDB 26 5.0 1MC5-A nrPDB 25 6.4 3COS-A nrPDB 25 7.4 >2MGS-A nrPDB Length = 78 Score = 114 bits (286), Expect = 8e-27, Method: Composition-based stats. Identities = 78/78 (100%), Positives = 78/78 (100%) Query: 37 AGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEA 96 AGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEA Sbjct: 1 AGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEA 60 Query: 97 PFLKKVIQKILDGGNKEN 114 PFLKKVIQKILDGGNKEN Sbjct: 61 PFLKKVIQKILDGGNKEN 78 >1F9P-A nrPDB Length = 85 Score = 101 bits (251), Expect = 9e-23, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 53/65 (81%) Query: 46 ELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQK 105 ELRC+C++TT G+HPK I +L+V G C++VEV+A+LK+G++ICLDP+AP +KK++QK Sbjct: 17 ELRCMCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQK 76 Query: 106 ILDGG 110 L G Sbjct: 77 KLAGD 81 >1MSH-A nrPDB Length = 72 Score = 99.4 bits (246), Expect = 3e-22, Method: Composition-based stats. Identities = 36/70 (51%), Positives = 54/70 (77%) Query: 41 AAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLK 100 A+V ELRC CLQT QG+HPK I ++ V + GP C++ EV+A+LKNG++ CL+P +P +K Sbjct: 1 ASVATELRCQCLQTLQGIHPKNIQSVNVKSPGPHCAQTEVIATLKNGRKACLNPASPIVK 60 Query: 101 KVIQKILDGG 110 K+I+K+L+ Sbjct: 61 KIIEKMLNSD 70 >1NAP-A nrPDB Length = 70 Score = 97.0 bits (240), Expect = 1e-21, Method: Composition-based stats. Identities = 36/65 (55%), Positives = 53/65 (81%) Query: 46 ELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQK 105 ELRC+C++TT G+HPK I +L+V G C++VEV+A+LK+G++ICLDP+AP +KK++QK Sbjct: 2 ELRCLCIKTTSGIHPKNIQSLEVIGKGTHCNQVEVIATLKDGRKICLDPDAPRIKKIVQK 61 Query: 106 ILDGG 110 L G Sbjct: 62 KLAGD 66 >1MI2-A nrPDB Length = 73 Score = 95.5 bits (236), Expect = 5e-21, Method: Composition-based stats. Identities = 37/70 (52%), Positives = 50/70 (71%) Query: 41 AAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLK 100 A V ELRC CL+T V K I +L V GP C++ EV+A+LK G+++CLDPEAP ++ Sbjct: 1 AVVASELRCQCLKTLPRVDFKNIQSLSVTPPGPHCAQTEVIATLKGGQKVCLDPEAPLVQ 60 Query: 101 KVIQKILDGG 110 K+IQKIL+ G Sbjct: 61 KIIQKILNKG 70 >1ROD-A nrPDB Length = 72 Score = 95.1 bits (235), Expect = 6e-21, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%) Query: 44 LRELRCVCLQT-TQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKV 102 +ELRC C++T ++ HPK I L+V GP C+ E++ L +G+E+CLDP +P +KK+ Sbjct: 2 AKELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPASPIVKKI 61 Query: 103 IQKILDGG 110 I+K+L+ Sbjct: 62 IEKMLNSD 69 >4XDX-A nrPDB Length = 70 Score = 94.0 bits (232), Expect = 1e-20, Method: Composition-based stats. Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 1/65 (1%) Query: 45 RELRCVCLQT-TQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVI 103 +ELRC C++T ++ HPK I L+V GP C+ E++ L +G+E+CLDP+ ++++V+ Sbjct: 1 KELRCQCIKTYSKPFHPKFIKELRVIESGPHCANTEIIVKLSDGRELCLDPKENWVQRVV 60 Query: 104 QKILD 108 +K L Sbjct: 61 EKFLK 65 >1PFN-A nrPDB Length = 68 Score = 92.8 bits (229), Expect = 3e-20, Method: Composition-based stats. Identities = 31/66 (46%), Positives = 49/66 (74%) Query: 44 LRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVI 103 +ELRC C++TT V P+ I++L+V GP C +++A+LKNG++ICLD +AP KK+I Sbjct: 3 AKELRCQCVKTTSQVRPRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKII 62 Query: 104 QKILDG 109 +K+L+ Sbjct: 63 KKLLES 68 >1PLF-A nrPDB Length = 72 Score = 92.8 bits (229), Expect = 3e-20, Method: Composition-based stats. Identities = 28/65 (43%), Positives = 47/65 (72%) Query: 45 RELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQ 104 +L+CVCL+TT G++P+ IS+L+V G C +++A+LK G++ICLD + P KK+I+ Sbjct: 8 EDLQCVCLKTTSGINPRHISSLEVIGAGLHCPSPQLIATLKTGRKICLDQQNPLYKKIIK 67 Query: 105 KILDG 109 ++L Sbjct: 68 RLLKS 72 >5OB5-A nrPDB Length = 63 Score = 89.0 bits (219), Expect = 4e-19, Method: Composition-based stats. Identities = 33/63 (52%), Positives = 50/63 (79%) Query: 46 ELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQK 105 ELRC CLQT QG+H K I +++V + GP C++ EV+A+LKNG++ CL+P +P +KK+I+K Sbjct: 1 ELRCQCLQTLQGIHLKNIQSVKVKSPGPHCAQTEVIATLKNGQKACLNPASPMVKKIIEK 60 Query: 106 ILD 108 +L Sbjct: 61 MLK 63 >5CBA-E nrPDB Length = 88 Score = 78.2 bits (191), Expect = 8e-16, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 45 RELRCVCLQTTQGVHPK-MISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVI 103 LRC C+Q + P+ I +Q+ G C + E++ KN +C+DP+A ++++++ Sbjct: 8 TSLRCRCVQESSVFIPRRFIDRIQILPRGNGCPRKEIIVWKKNKSIVCVDPQAEWIQRMM 67 Query: 104 QKILDGGN 111 + + + Sbjct: 68 EVLRKRSS 75 >2R3Z-A nrPDB Length = 68 Score = 71.6 bits (174), Expect = 8e-14, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Query: 43 VLRELRCVCLQTTQ-GVHPKMISNLQVFAIGPQCSKVEVVASL-KNGKEICLDPEAPFLK 100 + R +RC C+ V + I L++ C +VE++A++ KN ++ CL+PE+ +K Sbjct: 3 LARTVRCNCIHIDDGPVRMRAIGKLEIIPASLSCPRVEIIATMKKNDEQRCLNPESKTIK 62 Query: 101 KVIQKI 106 +++ Sbjct: 63 NLMKAF 68 >1LV9-A nrPDB Length = 77 Score = 67.4 bits (163), Expect = 1e-12, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 44/73 (60%), Gaps = 6/73 (8%) Query: 43 VLRELRCVCLQ-TTQGVHPKMISNLQVFAIGPQCSKVEVVASL-KNGKEICLDPEAPFLK 100 + R +RC C+ + Q V+P+ + L++ C +VE++A++ K G++ CL+PE+ Sbjct: 3 LSRTVRCTCISISNQPVNPRSLEKLEIIPASQFCPRVEIIATMKKKGEKRCLNPES---- 58 Query: 101 KVIQKILDGGNKE 113 K I+ +L +KE Sbjct: 59 KAIKNLLKAVSKE 71 >5L7M-A nrPDB Length = 88 Score = 52.4 bits (124), Expect = 4e-08, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 45 RELRCVCLQ-TTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVI 103 L+C C + V +I +QV G C K EVV K K IC++P A +L++++ Sbjct: 7 TNLKCRCSGVISTVVGLNIIDRIQVTPPGNGCPKTEVVIWTKMKKVICVNPRAKWLQRLL 66 Query: 104 QKI 106 + + Sbjct: 67 RHV 69 >6EHZ-A nrPDB Length = 98 Score = 43.5 bits (101), Expect = 2e-05, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 41/72 (56%), Gaps = 3/72 (4%) Query: 43 VLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNG-KEICLDPEAPFLKK 101 V RC C + + +L++ P C+ +++VA LKN +++C+DP+ ++++ Sbjct: 3 VSLSYRCPCRFFESHIARANVKHLKILNT-PNCA-LQIVARLKNNNRQVCIDPKLKWIQE 60 Query: 102 VIQKILDGGNKE 113 ++K L+ G +E Sbjct: 61 YLEKALNKGRRE 72 >2HDL-A nrPDB Length = 78 Score = 42.7 bits (99), Expect = 4e-05, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 5/62 (8%) Query: 48 RCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKN-----GKEICLDPEAPFLKKV 102 +C C + + + L++ P C + V+ + K+ G+E CL P+ K+ Sbjct: 3 KCKCSRKGPKIRYSDVKKLEMKPKYPHCEEKMVIITTKSVSRYRGQEHCLHPKLQSTKRF 62 Query: 103 IQ 104 I+ Sbjct: 63 IK 64 >1RJT-A nrPDB Length = 73 Score = 42.0 bits (97), Expect = 6e-05, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%) Query: 48 RCVCLQT-TQGVHPKMISNLQVFAIGPQCSKVEVVASLK-NGKEICLDPEAPFLKKVIQK 105 RC+C+ + V I + C K+EV+ +LK N + CL+P++ + +I+K Sbjct: 8 RCLCIGPGVKAVKVADIEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKK 67 Query: 106 I 106 + Sbjct: 68 V 68 >4MHE-A nrPDB Length = 70 Score = 41.2 bits (95), Expect = 1e-04, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 49 CVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 C + T+ + K I + PQC K V+ K G++IC DP +++K I + Sbjct: 11 CCLVYTSWQIPQKFI--VDYSETSPQCPKPGVILLTKRGRQICADPNKKWVQKYISDL 66 >1ZXT-A nrPDB Length = 76 Score = 39.6 bits (91), Expect = 3e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Query: 59 HPKMISNL-QVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 HP + L + + P C K V+ K G++IC DP ++++++Q++ Sbjct: 18 HPPPVQILKEWYPTSPACPKPGVILLTKRGRQICADPSKNWVRQLMQRL 66 >4LMQ-D nrPDB Length = 61 Score = 39.3 bits (90), Expect = 4e-04, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 3/63 (4%) Query: 48 RCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNG-KEICLDPEAPFLKKVIQKI 106 RC C V + +L++ P C+ +++VA LKN +++C+DP+ ++++ ++K Sbjct: 1 RCPCRFFESHVARANVKHLKILNT-PNCA-LQIVARLKNNNRQVCIDPKLKWIQEYLEKA 58 Query: 107 LDG 109 L+ Sbjct: 59 LNK 61 >2K04-A nrPDB Length = 70 Score = 38.1 bits (87), Expect = 8e-04, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 3/68 (4%) Query: 43 VLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNG-KEICLDPEAPFLKK 101 V RC C V + +L++ P C+ ++VA LKN +++C+DP+ ++++ Sbjct: 5 VSLSYRCPCRFFESHVARANVKHLKILNT-PNCA-CQIVARLKNNNRQVCIDPKLKWIQE 62 Query: 102 VIQKILDG 109 ++K L+ Sbjct: 63 YLEKCLNK 70 >2N55-A nrPDB Length = 70 Score = 37.3 bits (85), Expect = 0.001, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 37/68 (54%), Gaps = 3/68 (4%) Query: 43 VLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNG-KEICLDPEAPFLKK 101 V RC C V + +L++ P C+ +++VA LKN +++C+DP+ + ++ Sbjct: 5 VSLSYRCPCRFFESHVARANVKHLKILNT-PNCA-LQIVARLKNNNRQVCIDPKCKWCQE 62 Query: 102 VIQKILDG 109 ++K L+ Sbjct: 63 YLEKALNK 70 >2MP1-A nrPDB Length = 77 Score = 35.8 bits (81), Expect = 0.004, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 51 CLQTTQGVHPKMI-SNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKILDG 109 CL TQ P I N I C VV + G+++C P+ P+++++IQ++ Sbjct: 9 CLSVTQKPIPGYIVRNFHYLLIKDGCRVPAVVFTTLRGRQLCAPPDQPWVERIIQRLQRT 68 Query: 110 GNK 112 K Sbjct: 69 SAK 71 >1NCV-A nrPDB Length = 76 Score = 35.8 bits (81), Expect = 0.005, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 17/35 (48%) Query: 72 GPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 C + V+ K KEIC DP +++ ++ + Sbjct: 33 SSHCPREAVIFKTKLDKEICADPTQKWVQDFMKHL 67 >2RA4-A nrPDB Length = 76 Score = 35.4 bits (80), Expect = 0.006, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 19/32 (59%) Query: 75 CSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 C + V+ K GKEIC DP+ +++ ++ + Sbjct: 36 CPQKAVIFRTKLGKEICADPKEKWVQNYMKHL 67 >4ZKB-B nrPDB Length = 75 Score = 34.6 bits (78), Expect = 0.009, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 1/56 (1%) Query: 51 CLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 C T P+ F QCSK V+ K +++C DP +++K + + Sbjct: 11 CFSYTSRQIPQNFIA-DYFETSSQCSKPGVIFLTKRSRQVCADPSEEWVQKYVSDL 65 >1G2S-A nrPDB Length = 71 Score = 34.6 bits (78), Expect = 0.010, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 18/32 (56%) Query: 72 GPQCSKVEVVASLKNGKEICLDPEAPFLKKVI 103 CS+ V+ + K GK++C P +++K I Sbjct: 31 SNSCSQRAVIFTTKRGKKVCTHPRKKWVQKYI 62 >1HHV-A nrPDB Length = 74 Score = 34.3 bits (77), Expect = 0.012, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 21/37 (56%) Query: 70 AIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 CSK V+ K G+++C D ++KK++Q++ Sbjct: 33 PTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKLMQQL 69 >4RWS-C nrPDB Length = 80 Score = 34.3 bits (77), Expect = 0.014, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 21/37 (56%) Query: 70 AIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 CSK V+ K G+++C D ++KK++Q++ Sbjct: 30 PTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKLMQQL 66 >2JYO-A nrPDB Length = 70 Score = 33.5 bits (75), Expect = 0.023, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 24/67 (35%) Query: 44 LRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVI 103 C T + +HPK I C ++ K +C +P+ ++K ++ Sbjct: 1 ASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIV 60 Query: 104 QKILDGG 110 + + Sbjct: 61 RLLSKKV 67 >1EIG-A nrPDB Length = 73 Score = 33.1 bits (74), Expect = 0.027, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 20/32 (62%) Query: 75 CSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 C K V+ + K G++ C DP+ ++++ ++ + Sbjct: 32 CLKAGVIFTTKKGQQSCGDPKQEWVQRYMKNL 63 >1ESR-A nrPDB Length = 76 Score = 31.9 bits (71), Expect = 0.063, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 20/33 (60%) Query: 74 QCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 QC K V+ + GKE+C DP+ +++ ++ + Sbjct: 35 QCPKEAVIFKTQRGKEVCADPKERWVRDSMKHL 67 >2Q8T-A nrPDB Length = 74 Score = 31.6 bits (70), Expect = 0.085, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 5/41 (12%) Query: 74 QCSKVEVVASLKNGKEICLDPEAPFLKKVIQKILDGGNKEN 114 QCSK +V K G +C +P +++ I+ + KEN Sbjct: 39 QCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDM-----KEN 74 >2Q8R-E nrPDB Length = 66 Score = 31.6 bits (70), Expect = 0.085, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 5/41 (12%) Query: 74 QCSKVEVVASLKNGKEICLDPEAPFLKKVIQKILDGGNKEN 114 QCSK +V K G +C +P +++ I+ + KEN Sbjct: 31 QCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDM-----KEN 66 >1J9O-A nrPDB Length = 93 Score = 31.2 bits (69), Expect = 0.12, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Query: 50 VCLQ-TTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKILD 108 C+ TTQ + I + + V+ K G ++C DP+A +++ V++ + Sbjct: 10 TCVSLTTQRLPVSRIKTYTITEGSLRA----VIFITKRGLKVCADPQATWVRDVVRSMDR 65 Query: 109 GGNKEN 114 N N Sbjct: 66 KSNTRN 71 >2X6L-A nrPDB Length = 69 Score = 30.4 bits (67), Expect = 0.16, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 9/72 (12%) Query: 32 GPIASAGPAAAVLRELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEIC 91 P+ S P A C T P+ + + CS+ VV K K++C Sbjct: 1 APMGSDPPTAC--------CFSYTARKLPRNFV-VDYYETSSLCSQPAVVFQTKRSKQVC 51 Query: 92 LDPEAPFLKKVI 103 DP ++++ + Sbjct: 52 ADPSESWVQEYV 63 >2HCC-A nrPDB Length = 66 Score = 30.4 bits (67), Expect = 0.17, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 21/38 (55%) Query: 69 FAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 F +CSK V+ K G+++C P P ++ ++K+ Sbjct: 24 FETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKL 61 >1EQT-A nrPDB Length = 68 Score = 29.6 bits (65), Expect = 0.32, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 18/32 (56%) Query: 75 CSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 CS VV + +++C +PE ++++ I + Sbjct: 34 CSNPAVVFVTRKNRQVCANPEKKWVREYINSL 65 >1EOT-A nrPDB Length = 74 Score = 29.2 bits (64), Expect = 0.43, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 18/32 (56%) Query: 75 CSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 C + V+ K K+IC DP+ +++ ++ + Sbjct: 34 CPQKAVIFKTKLAKDICADPKKKWVQDSMKYL 65 >4ZLT-F nrPDB Length = 70 Score = 29.2 bits (64), Expect = 0.47, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Query: 51 CLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 C ++ + + I + F CS+ V+ K ++IC D + ++++ I + Sbjct: 13 CFSYSRKIPRQFI--VAYFETSSLCSQPGVIFLTKRNRQICADSKETWVQEYITDL 66 >5YAM-A nrPDB Length = 69 Score = 28.9 bits (63), Expect = 0.50, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 51 CLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 C P+ + F +CS + VV + +++C +PE ++++ I + Sbjct: 12 CFAYLSLALPRAHVK-EYFYTSSKCSNLAVVFVTRRNRQVCANPEKKWVQEYINYL 66 >5LTL-A nrPDB Length = 100 Score = 28.9 bits (63), Expect = 0.52, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 51 CLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQ 104 CL+ + V P+ + + + C ++ K +E+C +P ++++ I+ Sbjct: 18 CLKYYEKVLPRRL--VVGYRKALNCHLPAIIFVTKRNREVCTNPNDDWVQEYIK 69 >5UIW-B nrPDB Length = 75 Score = 28.9 bits (63), Expect = 0.59, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 18/32 (56%) Query: 75 CSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 CS VV + +++C +PE ++++ I + Sbjct: 35 CSNPAVVFVTRKNRQVCANPEKKWVREYINSL 66 >2VXW-A nrPDB Length = 69 Score = 28.9 bits (63), Expect = 0.60, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 18/32 (56%) Query: 75 CSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 CS VV + +++C +PE ++++ I + Sbjct: 35 CSNPAVVFVTRKNRQVCANPEKKWVREYINSL 66 >1NR4-A nrPDB Length = 71 Score = 28.5 bits (62), Expect = 0.72, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Query: 51 CLQTTQGVHPKMISNLQV-FAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 CL+ +G P + L+ + CS+ +V G+ IC DP +K ++ + Sbjct: 11 CLEYFKGAIP--LRKLKTWYQTSEDCSRDAIVFVTVQGRAICSDPNNKRVKNAVKYL 65 >5EKI-A nrPDB Length = 79 Score = 27.7 bits (60), Expect = 1.1, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Query: 51 CLQTTQGVHP-KMISNLQVFAIGPQCSKVEVV--ASLKNGKEICLDPEAPFLKKVIQKI 106 CL+ +Q P K++ + + CS ++ ++ E+C DP+ ++++++Q + Sbjct: 9 CLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQHL 67 >4XT3-B nrPDB Length = 91 Score = 27.7 bits (60), Expect = 1.2, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 16/33 (48%) Query: 74 QCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 C K ++ + + C DP+ ++K +Q + Sbjct: 33 SCGKRAIILETRQHRLFCADPKEQWVKDAMQHL 65 >1G91-A nrPDB Length = 77 Score = 27.7 bits (60), Expect = 1.2, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 2/62 (3%) Query: 51 CLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKILDGG 110 C+ T P + F +CSK V+ K G+ C +P ++ + ++L Sbjct: 12 CISYTPRSIPCSLLE-SYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCM-RMLKLD 69 Query: 111 NK 112 + Sbjct: 70 TR 71 >4HCS-A nrPDB Length = 81 Score = 27.3 bits (59), Expect = 1.6, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 2/62 (3%) Query: 50 VCLQTTQGVHPK-MISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKVIQKILD 108 VC + PK I C K + N + C+DP A +L + + ++ + Sbjct: 14 VCFKVLTTKEPKANIKRCYNLPKTNNCLKCVLFVDASN-RMKCIDPNASWLAERLYRLKE 72 Query: 109 GG 110 G Sbjct: 73 KG 74 >2L4N-A nrPDB Length = 113 Score = 27.3 bits (59), Expect = 1.6, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 51 CLQTTQGVHP-KMISNLQVFAIGPQCSKVEVV--ASLKNGKEICLDPEAPFLKKVIQKIL 107 CL+ +Q P K++ + + CS ++ ++ E+C DP+ ++++++Q + Sbjct: 9 CLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQHLD 68 Query: 108 DGGNKE 113 + + Sbjct: 69 KTPSPQ 74 >1DOL-A nrPDB Length = 77 Score = 27.3 bits (59), Expect = 1.7, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 16/32 (50%) Query: 75 CSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 C K V+ KEIC DP+ +++ + + Sbjct: 37 CPKEAVIFKTIVAKEICADPKQKWVQDSMDHL 68 >5WB2-B nrPDB Length = 76 Score = 27.3 bits (59), Expect = 1.7, Method: Composition-based stats. Identities = 7/33 (21%), Positives = 16/33 (48%) Query: 74 QCSKVEVVASLKNGKEICLDPEAPFLKKVIQKI 106 C K ++ + + C DP+ ++K +Q + Sbjct: 33 SCGKRAIILETRQHRLFCADPKEQWVKDAMQHL 65 >2XR1-A nrPDB Length = 640 Score = 26.9 bits (58), Expect = 2.0, Method: Composition-based stats. Identities = 6/27 (22%), Positives = 13/27 (48%) Query: 76 SKVEVVASLKNGKEICLDPEAPFLKKV 102 + E V + ++ C+D + KK+ Sbjct: 598 PRPERVFTEHGDEKACVDLASSVYKKL 624 >1HA6-A nrPDB Length = 70 Score = 26.2 bits (56), Expect = 3.9, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 15/29 (51%) Query: 75 CSKVEVVASLKNGKEICLDPEAPFLKKVI 103 C ++ K K +C DP+ ++K+ + Sbjct: 32 CDINAIIFHTKKRKSVCADPKQNWVKRAV 60 >5KOR-A nrPDB Length = 521 Score = 25.8 bits (55), Expect = 5.0, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 12/59 (20%) Query: 51 CLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGK---EICLDPEAPFLKKVIQKI 106 CL Q VH + P +++ L+N + + C P KK ++++ Sbjct: 74 CLSRYQSVHYR--------KPSPYKPSSYLISKLRNYEKLHKRC-GPGTESYKKALKQL 123 >1MC5-A nrPDB Length = 374 Score = 25.4 bits (54), Expect = 6.4, Method: Composition-based stats. Identities = 5/37 (13%), Positives = 16/37 (43%) Query: 47 LRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVAS 83 ++C + P I ++V +++++A+ Sbjct: 6 IKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIAT 42 >3COS-A nrPDB Length = 381 Score = 25.0 bits (53), Expect = 7.4, Method: Composition-based stats. Identities = 5/39 (12%), Positives = 17/39 (43%) Query: 45 RELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVAS 83 + ++C + P I ++V +++++A+ Sbjct: 7 KVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIAT 45 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.135 0.379 Lambda K H 0.267 0.0412 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,061,313 Number of Sequences: 36641 Number of extensions: 124011 Number of successful extensions: 416 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 309 Number of HSP's gapped (non-prelim): 109 length of query: 114 length of database: 10,336,785 effective HSP length: 79 effective length of query: 35 effective length of database: 7,442,146 effective search space: 260475110 effective search space used: 260475110 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 53 (25.0 bits)