BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P42641 (390 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4CSU-9 nrPDB 794 0.0 5M04-A nrPDB 692 0.0 1LNZ-A nrPDB 290 8e-79 1UDX-A nrPDB 245 3e-65 2DBY-A nrPDB 75 4e-14 1WXQ-A nrPDB 73 2e-13 2OHF-A nrPDB 72 6e-13 4A9A-A nrPDB 69 3e-12 1JAL-A nrPDB 66 2e-11 5EE0-A nrPDB 63 2e-10 1NI3-A nrPDB 63 2e-10 5ZZM-A nrPDB 57 1e-08 2E87-A nrPDB 55 4e-08 2QU8-A nrPDB 49 3e-06 3K53-A nrPDB 48 7e-06 4V7F-o nrPDB 43 2e-04 1XZP-A nrPDB 42 5e-04 5DN8-A nrPDB 41 9e-04 3J8G-X nrPDB 39 0.003 3R9W-A nrPDB 37 0.017 2WJG-A nrPDB 35 0.050 2QTH-A nrPDB 35 0.060 3IBY-A nrPDB 35 0.063 2WJI-A nrPDB 35 0.065 3LX8-A nrPDB 34 0.086 1ZJC-A nrPDB 33 0.19 2WIC-A nrPDB 33 0.27 3W5J-A nrPDB 33 0.29 2GJ9-A nrPDB 33 0.31 6N8N-W nrPDB 32 0.32 3GEH-A nrPDB 32 0.33 3A1U-A nrPDB 32 0.33 5T62-W nrPDB 32 0.40 3A1W-A nrPDB 32 0.47 3GEE-A nrPDB 32 0.61 5B3F-A nrPDB 31 0.70 1SUL-A nrPDB 31 0.84 1WF3-A nrPDB 30 2.0 1YN9-A nrPDB 30 2.4 6FT6-s nrPDB 30 2.5 4R98-A nrPDB 29 3.6 6N8J-m nrPDB 29 3.9 3TK1-A nrPDB 28 4.6 3BCF-A nrPDB 28 4.8 1MKY-A nrPDB 28 5.1 3CNO-A nrPDB 28 6.1 3EC1-A nrPDB 28 7.7 4M9Q-A nrPDB 28 8.5 5VKO-A nrPDB 28 9.1 5DI3-B nrPDB 28 9.1 >4CSU-9 nrPDB Length = 390 Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/390 (100%), Positives = 390/390 (100%) Query: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 241 LLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAI 300 LLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAI Sbjct: 241 LLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAI 300 Query: 301 AEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQ 360 AEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQ Sbjct: 301 AEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQ 360 Query: 361 LEEIAEEDDEDWDDDWDEDDEEGVEFIYKR 390 LEEIAEEDDEDWDDDWDEDDEEGVEFIYKR Sbjct: 361 LEEIAEEDDEDWDDDWDEDDEEGVEFIYKR 390 >5M04-A nrPDB Length = 360 Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/340 (100%), Positives = 340/340 (100%) Query: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR Sbjct: 21 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 80 Query: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG Sbjct: 81 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 140 Query: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS Sbjct: 141 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 200 Query: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV Sbjct: 201 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 260 Query: 241 LLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAI 300 LLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAI Sbjct: 261 LLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAI 320 Query: 301 AEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQA 340 AEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQA Sbjct: 321 AEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQA 360 >1LNZ-A nrPDB Length = 342 Score = 290 bits (742), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 163/334 (48%), Positives = 233/334 (69%), Gaps = 3/334 (0%) Query: 3 FVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYRFE 62 FVD+ + V GDGGNG V+FRREKY+PKGGP GGDGG GGDV E DE L TL+D+R++ Sbjct: 2 FVDQVKVYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGKGGDVVFEVDEGLRTLMDFRYK 61 Query: 63 KSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKGGW 122 K F+A RG++G S++ G+ D+ IKVP GT V D T + + D+T+HGQR ++A+GG Sbjct: 62 KHFKAIRGEHGMSKNQHGRNADDMVIKVPPGTVVTDDDTKQVIADLTEHGQRAVIARGGR 121 Query: 123 HGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAA 182 G GN+RF + N P+ NG PG +R ++LEL +LADVG++G P+ GKST + VS+A Sbjct: 122 GGRGNSRFATPANPAPQLSENGEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLL 242 KPK+ADY FTTLVP+LG+V D+ +SFV+AD+PGLIEGA +G GLG +FL+H+ER RV++ Sbjct: 182 KPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEGAHQGVGLGHQFLRHIERTRVIV 241 Query: 243 HLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAE 302 H+ID+ ++G DP ++ I EL +Y+ L +P+ +V NK+D+ EA E +A E Sbjct: 242 HVIDMSGLEGRDPYDDYLTINQELSEYNLRLTERPQIIVANKMDM---PEAAENLEAFKE 298 Query: 303 ALGWEDKYYLISAASGLGVKDLCWDVMTFIIENP 336 L + + ISA + G+++L ++V + P Sbjct: 299 KLTDDYPVFPISAVTREGLRELLFEVANQLENTP 332 >1UDX-A nrPDB Length = 416 Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 152/323 (47%), Positives = 213/323 (65%), Gaps = 10/323 (3%) Query: 3 FVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYRFE 62 F D I V AG GG+G VSFRREK++PKGGPDGGDGG GG V++ A ++++L + Sbjct: 2 FQDVLVITVAAGRGGDGAVSFRREKFVPKGGPDGGDGGRGGSVYLRARGSVDSLSRLS-K 60 Query: 63 KSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKGGW 122 ++++AE G++G G+ G+D+ I+VP GTRV D TGE + D+T+ GQ +LVA+GG Sbjct: 61 RTYKAEDGEHGRGSQQHGRGGEDLVIEVPRGTRVFDADTGELLADLTEEGQTVLVARGGA 120 Query: 123 HGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAA 182 G GN F S + PR G G+KR L LELML+ADVG++G PNAGKS+ + A++ A Sbjct: 121 GGRGNMHFVSPTRQAPRFAEAGEEGEKRRLRLELMLIADVGLVGYPNAGKSSLLAAMTRA 180 Query: 183 KPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLL 242 PK+A YPFTTL P+LGVV + E+ F +ADIPG+IEGA+EG GLG+ FL+H+ R RVLL Sbjct: 181 HPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASEGKGLGLEFLRHIARTRVLL 240 Query: 243 HLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAE 302 +++D +P++ + E+ Y L +P + NK+DLL+ EE KA+A+ Sbjct: 241 YVLD----AADEPLKTLETLRKEVGAYDPALLRRPSLVALNKVDLLE----EEAVKALAD 292 Query: 303 ALGWEDKYYL-ISAASGLGVKDL 324 AL E L +SA +G G+ L Sbjct: 293 ALAREGLAVLPVSALTGAGLPAL 315 >2DBY-A nrPDB Length = 368 Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 29/146 (19%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVV---------- 211 VG++G+PN GKST A++ A A+YPF T+ ++GVV +++E+ + + Sbjct: 4 VGIVGLPNVGKSTLFNALTRANALAANYPFATIDKNVGVVPLEDERLYALQRTFAKGERV 63 Query: 212 ----------ADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDP-------IDGTD 254 DI GL++GA +G GLG +FL H+ + H++ P + D Sbjct: 64 PPVVPTHVEFVDIAGLVKGAHKGEGLGNQFLAHIREVAAIAHVLRCFPDPDVVHVMGRVD 123 Query: 255 PVENARIIISELEKYSQDLATKPRWL 280 P+E+A ++ +EL DLAT R L Sbjct: 124 PLEDAEVVETEL--LLADLATLERRL 147 >1WXQ-A nrPDB Length = 397 Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 48/201 (23%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRM------------DNEKS 208 ++G++G PN GKSTF A + ++A+YPFTT+ ++GV N ++ Sbjct: 2 EIGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIEANVGVTYAITDHPCKELGCSPNPQN 61 Query: 209 F-----------VVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDI--------DP 249 + + D+ GL+ GA EG GLG +FL L L+H++D P Sbjct: 62 YEYRNGLALIPVKMVDVAGLVPGAHEGRGLGNKFLDDLRMASALIHVVDATGKTDPEGQP 121 Query: 250 IDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDK 309 D DPVE+ + E++ + + +K W F K L K++ E AIAE L Sbjct: 122 TDYHDPVEDIEFLEREIDYWIYGILSK-GWDKFAKRIKLQKIKLES---AIAEHL----- 172 Query: 310 YYLISAASGLGVKDL-CWDVM 329 SG+GV + W+ M Sbjct: 173 -------SGIGVNENDVWEAM 186 >2OHF-A nrPDB Length = 396 Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 23/129 (17%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEK-------------- 207 +G++G+PN GKSTF ++ ++ ++PF T+ P+ V + +E+ Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPASKI 84 Query: 208 -SFV-VADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLI------DIDPIDGT-DPVEN 258 +F+ V DI GL++GA G GLG FL H+ C + HL DI ++G+ DP+ + Sbjct: 85 PAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDDDITHVEGSVDPIRD 144 Query: 259 ARIIISELE 267 II EL+ Sbjct: 145 IEIIHEELQ 153 >4A9A-A nrPDB Length = 376 Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 6/126 (4%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI 218 +A VG +G P+ GKST + ++ + + A+Y FTTLV GV+R K + D+PG+I Sbjct: 72 VASVGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGVIRYKGAK-IQMLDLPGII 130 Query: 219 EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 +GA +G G G + + C +L ++D++ P+ + +II ELE L P Sbjct: 131 DGAKDGRGRGKQVIAVARTCNLLFIILDVN-----KPLHHKQIIEKELEGVGIRLNKTPP 185 Query: 279 WLVFNK 284 ++ K Sbjct: 186 DILIKK 191 >1JAL-A nrPDB Length = 363 Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 30/134 (22%) Query: 163 GMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVA---------- 212 G++G+PN GKST A++ A + A+YPF T+ P+ GVV M + + +A Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERILP 65 Query: 213 ------DIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLI-------------DIDPIDGT 253 DI GL+ GA++G GLG +FL ++ + H++ IDP+D Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDDI 125 Query: 254 DPVENARIIISELE 267 D + N + +++L+ Sbjct: 126 DTI-NTELALADLD 138 >5EE0-A nrPDB Length = 395 Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 31/173 (17%) Query: 141 KTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGV 200 K + P + R +L +G++G+PN GKSTF V+ ++PF T+ P+ Sbjct: 8 KKDAAPAE-RPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEAR 66 Query: 201 VRMDNE-----------KSFVVA-----DIPGLIEGAAEGAGLGIRFLKHLERCRVLLHL 244 V + +E KS V A DI GL+ GA G GLG FL H+ + H+ Sbjct: 67 VYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHV 126 Query: 245 I------DIDPI-DGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDK 290 + ++ I D DPV + LE ++L K V NKID L+K Sbjct: 127 LRAFEDKEVTHIDDSVDPVRD-------LETIGEELRLKDIEFVQNKIDDLEK 172 >1NI3-A nrPDB Length = 392 Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 28/130 (21%) Query: 163 GMLGMPNAGKSTFIRAVSAA---KPKVADYPFTTLVPSLGVVRMDNEK------------ 207 G++GMPN GKSTF RA++ + P A+YP+ T+ P V + +E+ Sbjct: 24 GIVGMPNVGKSTFFRAITKSVLGNP--ANYPYATIDPEEAKVAVPDERFDWLCEAYKPKS 81 Query: 208 ----SFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLI------DIDPIDG-TDPV 256 V DI GL +GA+ G GLG FL H+ + ++ +I ++G DP+ Sbjct: 82 RVPAFLTVFDIAGLTKGASTGVGLGNAFLSHVRAVDAIYQVVRAFDDAEIIHVEGDVDPI 141 Query: 257 ENARIIISEL 266 + II+ EL Sbjct: 142 RDLSIIVDEL 151 >5ZZM-A nrPDB Length = 426 Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 21/213 (9%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGA 221 V ++G NAGKST ++ A+ AD F TL P+L + + + V+AD G I Sbjct: 200 VSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHL 259 Query: 222 AEGAGLGIR-FLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWL 280 + L+ + +LLH+ID + + +E ++ E++ + P L Sbjct: 260 PHDLVAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAHE-----IPTLL 314 Query: 281 VFNKIDLLD----KVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENP 336 V NKID+L+ +++ +E+ K ++ +L SA +G G+ L + +T + Sbjct: 315 VMNKIDMLEDFEPRIDRDEENKP--------NRVWL-SAQTGAGIPQL-FQALTERLSGE 364 Query: 337 VVQAEEAKQPEKVEFMWDDYHRQQLE-EIAEED 368 V Q P++ Y Q +E E EED Sbjct: 365 VAQHTLRLPPQEGRLRSRFYQLQAIEKEWMEED 397 >2E87-A nrPDB Length = 357 Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI 218 + V + G PN GKST ++A++ AKP++A YPFTT ++G D + + D PGL+ Sbjct: 167 IPTVVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVGQFE-DGYFRYQIIDTPGLL 225 Query: 219 EGAA-------EGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQ 271 + + A L +R+L +L ++++ D G P+E + E+ + Sbjct: 226 DRPISERNEIEKQAILALRYLGNL-----IIYIFDPSEHCGF-PLEEQIHLFEEVHGEFK 279 Query: 272 DLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGV 321 DL P +V NKID+ D+ + K + E K ISA G G+ Sbjct: 280 DL---PFLVVINKIDVADEENIKRLEKFVKEKGLNPIK---ISALKGTGI 323 >2QU8-A nrPDB Length = 228 Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 51/165 (30%), Positives = 74/165 (44%), Gaps = 17/165 (10%) Query: 166 GMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNE-KSFVVADIPGLIEGAAEG 224 G PN GKS+F+ VS A V Y FTT +L V D++ + + D PGL++ A E Sbjct: 36 GAPNVGKSSFMNIVSRANVDVQSYSFTT--KNLYVGHFDHKLNKYQIIDTPGLLDRAFEN 93 Query: 225 AG----LGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWL 280 I L H+ V+L +IDI G E + S +S K + Sbjct: 94 RNTIEMTTITALAHIN--GVILFIIDISEQCGLTIKEQINLFYSIKSVFSN----KSIVI 147 Query: 281 VFNKIDL--LDKVEAEEK--AKAIAEALGWEDKYYLISAASGLGV 321 FNKID +D + + K K I + + K+ S +G+GV Sbjct: 148 GFNKIDKCNMDSLSIDNKLLIKQILDNVKNPIKFSSFSTLTGVGV 192 >3K53-A nrPDB Length = 271 Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 14/151 (9%) Query: 157 MLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPG 216 M+L V ++G PN GK+T A++ + V ++P T+ G++ EK F+V D+PG Sbjct: 1 MVLKTVALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIMEY-REKEFLVVDLPG 59 Query: 217 LIEGAAEGAGLGIRFLKHLERCRVLLHLID--IDPIDGTDPVENARIIISELEKYSQDLA 274 + A + + R +L D +D +D T + N + + E + Sbjct: 60 IYSLTAHSID------ELIARNFILDGNADVIVDIVDSTCLMRNLFLTLELFE-----ME 108 Query: 275 TKPRWLVFNKIDLLDKVEAEEKAKAIAEALG 305 K LV NK DLL K A+ K + + LG Sbjct: 109 VKNIILVLNKFDLLKKKGAKIDIKKMRKELG 139 >4V7F-o nrPDB Length = 647 Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 13/146 (8%) Query: 164 MLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEK-SFVVADIPGLIEGAA 222 + G PN GKS+F+R ++ + V Y FTT SL V D + F D PG+++ Sbjct: 172 ICGYPNVGKSSFLRCITKSDVDVQPYAFTT--KSLYVGHFDYKYLRFQAIDTPGILDRPT 229 Query: 223 EGAG----LGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 E I + HL C +L+ +D+ G ++ S A K Sbjct: 230 EEMNNIEMQSIYAIAHLRSC--VLYFMDLSEQCGFTIEAQVKLFHS----IKPLFANKSV 283 Query: 279 WLVFNKIDLLDKVEAEEKAKAIAEAL 304 +V NK D++ + +E+ + E++ Sbjct: 284 MVVINKTDIIRPEDLDEERAQLLESV 309 >1XZP-A nrPDB Length = 482 Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 78/167 (46%), Gaps = 25/167 (14%) Query: 164 MLGMPNAGKSTFI-RAVSAAKPKVADYPFTT--LVPSLGVVRMDNEKSFVVADIPGLIEG 220 ++G PN GKST + R ++ + V D P TT ++ V+R F + D G+ Sbjct: 248 IVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIR---GILFRIVDTAGVRSE 304 Query: 221 AAEGA-GLGI-RFLKHLERCRVLLHLIDI-DPIDGTDPVENARIIISELEKYSQDLATKP 277 + LGI R L+ +E+ ++L ++D P+D D K + + K Sbjct: 305 TNDLVERLGIERTLQEIEKADIVLFVLDASSPLDEED------------RKILERIKNKR 352 Query: 278 RWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDL 324 +V NK+D+++K+ EE I LG + ISA G G++ L Sbjct: 353 YLVVINKVDVVEKINEEE----IKNKLGTDRHMVKISALKGEGLEKL 395 >5DN8-A nrPDB Length = 446 Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 36/188 (19%) Query: 158 LLADVGMLGMPNAGKSTFIRAVSAAKPK-VADYPFTTLVPSLGVVRMDNEKSFVVADIPG 216 +L + ++G PN GKST ++ ++ VAD P T G +D+++ +V D G Sbjct: 4 MLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRLLLV-DTGG 62 Query: 217 LIEGA-AEGAGLG-IRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLA 274 L++ E A L + + ++ +L L+D G P + II L K + + Sbjct: 63 LVDTENKEVAPLAETQVEQAIDESDCILFLVDAKA--GLVPADE--IIAERLRKKGKKI- 117 Query: 275 TKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKY-------YLISAASGLGVKDLCWD 327 +L NK D +A+A A+ D Y Y+I+AASG GVKDL Sbjct: 118 ----FLAVNKAD---------RARA---AVVQSDFYKLGFGEPYVIAAASGRGVKDL--- 158 Query: 328 VMTFIIEN 335 MT ++EN Sbjct: 159 -MTQVLEN 165 Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 35/179 (19%) Query: 162 VGMLGMPNAGKSTFI-RAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGL--- 217 + M+G PN GKST I R + + V D P TT S+ + N++++ + D G+ Sbjct: 181 IAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTR-DSIYIPFARNDENYTLIDTAGIRRR 239 Query: 218 --IEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAT 275 I+ E + I+ L+ + V++ L+D AR ++E QDL Sbjct: 240 AKIQDYVEKFSM-IKSLQAMHAADVVIFLLD------------ARQGVTE-----QDLRL 281 Query: 276 KPR--------WLVFNKIDLLDKVEAEEKAKAIAEALGWED--KYYLISAASGLGVKDL 324 R + NK D L+ E + AI + + D + Y ISA G GV L Sbjct: 282 LNRIVEAGVSLIIAVNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFISALHGTGVGKL 340 >3J8G-X nrPDB Length = 490 Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 81/183 (44%), Gaps = 19/183 (10%) Query: 162 VGMLGMPNAGKST-FIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEG 220 V ++G PN GKST F R VAD+P T G ++ + F+ D G I+G Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEG-REFICIDTGG-IDG 62 Query: 221 AAEG--AGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 +G + + L +E V+L ++D G P + A I L KP Sbjct: 63 TEDGVETRMAEQSLLAIEEADVVLFMVDARA--GLMPADEA--IAKHLRSRE-----KPT 113 Query: 279 WLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVV 338 +LV NK D LD ++A +LG + Y I+A+ G GV L V+ +E+ Sbjct: 114 FLVANKTDGLDP----DQAVVDFYSLGL-GEIYPIAASHGRGVLSLLEHVLLPWMEDLAP 168 Query: 339 QAE 341 Q E Sbjct: 169 QEE 171 Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust. Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 35/183 (19%) Query: 162 VGMLGMPNAGKSTFI-RAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGL--- 217 + ++G PN GKST R + + V D P TT S+ + + + +V+ D G+ Sbjct: 205 LAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTR-DSIYIPMERDGREYVLIDTAGVRKR 263 Query: 218 --IEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAT 275 I A E + I+ L+ +E V++ +ID AR IS+ QDL+ Sbjct: 264 GKITDAVEKFSV-IKTLQAIEDANVVMLVID------------AREGISD-----QDLSL 305 Query: 276 --------KPRWLVFNKIDLLDKVEAEEKAKAIAEALGWED--KYYLISAASGLGVKDLC 325 + +V NK D L + E+ + + LG+ D + + ISA G GV +L Sbjct: 306 LGFILNSGRSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGNLF 365 Query: 326 WDV 328 V Sbjct: 366 ESV 368 >3R9W-A nrPDB Length = 307 Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust. Identities = 52/192 (27%), Positives = 78/192 (40%), Gaps = 41/192 (21%) Query: 162 VGMLGMPNAGKSTFIR-----AVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPG 216 V ++G PN GKST + VS PK TT + LGV + NE + D PG Sbjct: 12 VAIVGKPNVGKSTLLNNLLGTKVSIISPKAG----TTRMRVLGVKNIPNEAQIIFLDTPG 67 Query: 217 LIEGAAEGAGLGIRFL----KHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQD 272 + E LG + + LE V+L +ID +G P + E+ + Sbjct: 68 IYEPKKSDV-LGHSMVEIAKQSLEEADVILFMIDAT--EGWRPRD------EEIYQNFIK 118 Query: 273 LATKPRWLVFNKID----------LLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVK 322 KP +V NKID L+D E +K + E + ISA G + Sbjct: 119 PLNKPVIVVINKIDKIGPAKNVLPLID--EIHKKHPELTEIVP-------ISALKGANLD 169 Query: 323 DLCWDVMTFIIE 334 +L ++ ++ E Sbjct: 170 ELVKTILKYLPE 181 >2WJG-A nrPDB Length = 188 Score = 35.0 bits (79), Expect = 0.050, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 17/166 (10%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEG 220 ++ ++G PN GKST A++ + ++P T+ G + EK F V D+PG+ Sbjct: 9 EIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEK-FKVVDLPGVYSL 67 Query: 221 AAEGAGLGIRFLKHLERCRVLLHLID--IDPIDGTDPVENARIIISELEKYSQDLATKPR 278 A + + R ++ D ++ +D T N + + +E + L Sbjct: 68 TANSID------EIIARDYIINEKPDLVVNIVDATALERNLYLTLQLMEMGANLL----- 116 Query: 279 WLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDL 324 L NK+DL + E + + LG K +SAA +G+++L Sbjct: 117 -LALNKMDLAKSLGIEIDVDKLEKILGV--KVVPLSAAKKMGIEEL 159 >2QTH-A nrPDB Length = 364 Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI 218 + +G++G N+GK++ +++ KV FTT+ P + ++N K +V D G I Sbjct: 179 IPSIGIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRYAIPINNRKIMLV-DTVGFI 237 Query: 219 EG 220 G Sbjct: 238 RG 239 >3IBY-A nrPDB Length = 256 Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust. Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 164 MLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAE 223 ++G PN GK+T A++ A +V ++P T+ G + E + D+PG+ A Sbjct: 6 LIGNPNCGKTTLFNALTNANQRVGNWPGVTVEKKTGEFLL-GEHLIEITDLPGVYSLVAN 64 Query: 224 GAGLG 228 G+ Sbjct: 65 AEGIS 69 >2WJI-A nrPDB Length = 165 Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGL 217 ++ ++G PN GKST A++ + ++P T+ G + EK F V D+PG+ Sbjct: 5 EIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEK-FKVVDLPGV 60 >3LX8-A nrPDB Length = 272 Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust. Identities = 14/59 (23%), Positives = 34/59 (57%), Gaps = 2/59 (3%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGL 217 + ++ ++G PN+GK++ ++ +V ++P T+ G+V+ + K + D+PG+ Sbjct: 3 MTEIALIGNPNSGKTSLFNLITGHNQRVGNWPGVTVERKSGLVKKN--KDLEIQDLPGI 59 >1ZJC-A nrPDB Length = 418 Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust. Identities = 17/33 (51%), Positives = 20/33 (60%) Query: 244 LIDIDPIDGTDPVENARIIISELEKYSQDLATK 276 + DI IDG DPVEN R I+ L Y+Q L K Sbjct: 178 VFDIVRIDGNDPVENWRQHIANLSVYAQKLQQK 210 >2WIC-A nrPDB Length = 267 Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust. Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPG 216 VG++G PN+GK+T ++ A+ +V ++ T+ G+ + + +V D+PG Sbjct: 6 VGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGIFATTDHQVTLV-DLPG 59 >3W5J-A nrPDB Length = 204 Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust. Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGL 217 + +LGMPN GKST ++ +V ++P T+ G + + + ++ D+PG+ Sbjct: 6 IALLGMPNTGKSTLFNRMTGGAARVGNWPGITVELLSGKILLGADMVEII-DLPGI 60 >2GJ9-A nrPDB Length = 172 Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust. Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 9/128 (7%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKPK-VADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEG 220 V + G PNAGKS+ + A++ + V D TT + +D ++ D GL E Sbjct: 7 VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHII-DTAGLREA 65 Query: 221 AAEGAGLGI-RFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRW 279 + E +GI R + +E+ +L ++D D DP E I+ L A P Sbjct: 66 SDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLP------AKLPIT 119 Query: 280 LVFNKIDL 287 +V NK D+ Sbjct: 120 VVRNKADI 127 >6N8N-W nrPDB Length = 640 Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%) Query: 161 DVGMLGMPNAGKSTFIRA-VSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI 218 ++G++G PN GKS+ I + V A K V+ P T +++ + S ++ D PGL+ Sbjct: 338 NIGLVGYPNVGKSSTINSLVGAKKVSVSSTPGKT--KHFQTIKLSD--SVMLCDCPGLV 392 >3GEH-A nrPDB Length = 462 Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 59/137 (43%), Gaps = 26/137 (18%) Query: 162 VGMLGMPNAGKSTFIRAVSAA-KPKVADYPFTTLVPSLGVVRMDNEKSFVVADIP----- 215 V ++G PN GKS+ + A S + + V D P TT R E VV IP Sbjct: 227 VAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTT--------RDVVESQLVVGGIPVQVLD 278 Query: 216 --GLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDL 273 G+ E + + +G+ + L+ L+ ID G + E Y Q + Sbjct: 279 TAGIRETSDQVEKIGVERSRQAANTADLV-LLTIDAATGWTT--------GDQEIYEQ-V 328 Query: 274 ATKPRWLVFNKIDLLDK 290 +P LV NKIDL++K Sbjct: 329 KHRPLILVMNKIDLVEK 345 >3A1U-A nrPDB Length = 258 Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust. Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPG 216 + V + G PN GK++ A++ K VA++P T+ GV + + D+PG Sbjct: 5 MVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKG-YTINLIDLPG 61 >5T62-W nrPDB Length = 651 Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%) Query: 161 DVGMLGMPNAGKSTFIRA-VSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI 218 ++G++G PN GKS+ I + V A K V+ P T +++ + S ++ D PGL+ Sbjct: 338 NIGLVGYPNVGKSSTINSLVGAKKVSVSSTPGKT--KHFQTIKLSD--SVMLCDCPGLV 392 >3A1W-A nrPDB Length = 168 Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust. Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPG 216 + V + G PN GK++ A++ K VA++P T+ GV + + D+PG Sbjct: 5 MVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKG-YTINLIDLPG 61 >3GEE-A nrPDB Length = 476 Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 18/163 (11%) Query: 166 GMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGA 225 G PNAGKST + + + + + T + + ++ F + D GL E E Sbjct: 240 GKPNAGKSTLLNTLLGQERAIVSHMPGTTRDYIEECFIHDKTMFRLTDTAGLREAGEEIE 299 Query: 226 GLGIRFLK-HLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKP--RWL-V 281 GIR + + ++L+L+D+ GT+ +++ I EL+ A P ++L V Sbjct: 300 HEGIRRSRMKMAEADLILYLLDL----GTERLDDELTEIRELK------AAHPAAKFLTV 349 Query: 282 FNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDL 324 NK+D A+ +AIA+ G E ISA +G G+ L Sbjct: 350 ANKLD--RAANADALIRAIADGTGTE--VIGISALNGDGIDTL 388 >5B3F-A nrPDB Length = 343 Score = 31.2 bits (69), Expect = 0.70, Method: Compositional matrix adjust. Identities = 16/44 (36%), Positives = 24/44 (54%) Query: 137 TPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 PR P + RE++ L+ +G+ G +GKSTF RA+S Sbjct: 15 VPRGSHMSQPENFREVIRHSPLVYLIGVAGDSGSGKSTFTRAIS 58 >1SUL-A nrPDB Length = 195 Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust. Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 24/185 (12%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAK--PKVADYPFTTLVPSLGVVRMDNEKSFVVADIPG 216 L ++ + G N GKS+FI ++ K + + P T +L +++E FV D+PG Sbjct: 23 LPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKT--QTLNFYIINDELHFV--DVPG 78 Query: 217 -----LIEGAAEGAGLGIR-FLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYS 270 + + E G I ++ E + ++ ++D+ D V+ + E KY Sbjct: 79 YGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQ-----MYEFLKYY 133 Query: 271 QDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGW--EDKYYLISAASGLGVKDLCWDV 328 P ++ K D + K + ++ AK + + L ED+ L S+ + G KD W Sbjct: 134 GI----PVIVIATKADKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKKG-KDEAWGA 188 Query: 329 MTFII 333 + +I Sbjct: 189 IKKMI 193 >1WF3-A nrPDB Length = 301 Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust. Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 13/183 (7%) Query: 162 VGMLGMPNAGKSTFIRAVSAAK-PKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEG 220 V ++G PN GKST + + K ++ P TT G++ + + V D PGL + Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGIL-TEGRRQIVFVDTPGLHKP 68 Query: 221 A-AEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRW 279 A G + + L ++ ++D+ P ++ L+ + P Sbjct: 69 MDALGEFMDQEVYEALADVNAVVWVVDLR----HPPTPEDELVARALKPL---VGKVPIL 121 Query: 280 LVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQ 339 LV NK+D EE KA E L E + ++SA V +L D++ + E P Sbjct: 122 LVGNKLDAAKY--PEEAMKAYHELLP-EAEPRMLSALDERQVAELKADLLALMPEGPFFY 178 Query: 340 AEE 342 E+ Sbjct: 179 PED 181 >1YN9-A nrPDB Length = 169 Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 19/36 (52%) Query: 238 CRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDL 273 CR L+H + I P + D E AR E + Y QDL Sbjct: 132 CRYLMHTLGIAPQEAIDRFEKARGHKIERQNYVQDL 167 >6FT6-s nrPDB Length = 520 Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 23/92 (25%) Query: 162 VGMLGMPNAGKSTFIRAV-------SAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADI 214 VG++G PN GKS+ I A+ S A P + TT SL +++DN+ + D Sbjct: 283 VGVIGYPNVGKSSVINALLARRGGQSKACPVGNEAGVTT---SLREIKIDNK--LKILDS 337 Query: 215 PGL-----------IEGAAEGAGLGIRFLKHL 235 PG+ +E AE A L KH+ Sbjct: 338 PGICFPSENKKRSKVEHEAELALLNALPAKHI 369 >4R98-A nrPDB Length = 271 Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust. Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPG 216 +G++G PN+GK+T ++ ++ +V ++ T+ G + + +V D+PG Sbjct: 6 IGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTDHQVTLV-DLPG 59 >6N8J-m nrPDB Length = 486 Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 5/71 (7%) Query: 162 VGMLGMPNAGKSTFIRAVSAAK-PKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEG 220 VG +G PN GKS+ I + K +VA P T V + K + D PG++ Sbjct: 318 VGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITLM----KRIFLIDCPGIVPP 373 Query: 221 AAEGAGLGIRF 231 +++ + I F Sbjct: 374 SSKDSEEDILF 384 >3TK1-A nrPDB Length = 330 Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 10/52 (19%) Query: 138 PRQKT--NGTPGDKRE----LLLELMLLA----DVGMLGMPNAGKSTFIRAV 179 PR T T D RE LLLELM A VG+ G+P GKST I A+ Sbjct: 25 PRAITLVESTRADHRERAQELLLELMPDAGRAMHVGITGVPGVGKSTSIEAL 76 >3BCF-A nrPDB Length = 599 Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust. Identities = 13/38 (34%), Positives = 21/38 (55%) Query: 353 WDDYHRQQLEEIAEEDDEDWDDDWDEDDEEGVEFIYKR 390 WDDY ++ + + +E DW +WDED G + Y+ Sbjct: 287 WDDYSKESGKYLFDEKSWDWTYNWDEDYLMGADVDYEN 324 >1MKY-A nrPDB Length = 439 Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 7/91 (7%) Query: 162 VGMLGMPNAGKSTFIRAV-SAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGL--- 217 V ++G PN GKST A+ + + V+ P TT P V +D K +V D GL Sbjct: 183 VAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFIDGRK-YVFVDTAGLRRK 241 Query: 218 --IEGAAEGAGLGIRFLKHLERCRVLLHLID 246 +E R + +E+ V++ ++D Sbjct: 242 SRVEPRTVEKYSNYRVVDSIEKADVVVIVLD 272 >3CNO-A nrPDB Length = 262 Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust. Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 3/33 (9%) Query: 147 GDKRELLLELM---LLADVGMLGMPNAGKSTFI 176 G+ R++LL+ + LA V ++G+PN GKST I Sbjct: 84 GEPRKVLLKKLSFDRLARVLIVGVPNTGKSTII 116 >3EC1-A nrPDB Length = 369 Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust. Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVP--SLGVVRMDNEKSFVVADIPGLI 218 DV ++G N GKSTFI + + T+ P +L ++ + E + D PG+I Sbjct: 164 DVYVVGCTNVGKSTFINRIIEEATGKGNVITTSYFPGTTLDMIEIPLESGATLYDTPGII 223 >4M9Q-A nrPDB Length = 227 Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 27/148 (18%) Query: 162 VGMLGMPNAGKSTFIRAVSAA--KPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIE 219 + +LG+ NAGK+T + ++ + + F + + G +++ V D+ Sbjct: 7 IALLGLDNAGKTTLLNSIQGEVDRDTTPTFGFNSTTLNEGKYKIE------VFDL----- 55 Query: 220 GAAEGAGLGIR--FLKHLERCRVLLHLIDIDPIDGTDP--VENARIIISELEKYSQDLAT 275 G G IR + K+L ++++ +D DP E +++ ++E+ + +Q + Sbjct: 56 ----GGGKNIRGVWKKYLAEVHAIVYV-----VDAADPGRFEESKMTMAEVLE-NQFMRD 105 Query: 276 KPRWLVFNKIDLLDKVEAEEKAKAIAEA 303 KP + NK DL A E K + A Sbjct: 106 KPICIFANKQDLPTAAPAAEVVKGLGLA 133 >5VKO-A nrPDB Length = 211 Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 1/59 (1%) Query: 241 LLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKA 299 L IDI ++ +P+ +++I + +KY+ DL + NK+ LL+++ + EK K+ Sbjct: 61 LFQHIDIQELEKENPLALGKVLIVDNQKYN-DLDQIIVEYLQNKVRLLNEMTSSEKFKS 118 >5DI3-B nrPDB Length = 263 Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust. Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 27/148 (18%) Query: 162 VGMLGMPNAGKSTFIRAVSAA--KPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIE 219 + +LG+ NAGK+T + ++ + + F + + G +++ V D+ Sbjct: 7 IALLGLDNAGKTTLLNSIQGEVDRDTTPTFGFNSTTLNEGKYKIE------VFDL----- 55 Query: 220 GAAEGAGLGIR--FLKHLERCRVLLHLIDIDPIDGTDP--VENARIIISELEKYSQDLAT 275 G G IR + K+L ++++ +D DP E +++ ++E+ + +Q + Sbjct: 56 ----GGGKNIRGVWKKYLAEVHAIVYV-----VDAADPGRFEESKMTMAEVLE-NQFMRD 105 Query: 276 KPRWLVFNKIDLLDKVEAEEKAKAIAEA 303 KP + NK DL A E K + A Sbjct: 106 KPICIFANKQDLPTAAPAAEVVKGLGLA 133 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4CSU-9 nrPDB 594 e-170 5M04-A nrPDB 510 e-145 1LNZ-A nrPDB 404 e-113 1UDX-A nrPDB 359 1e-99 5ZZM-A nrPDB 198 3e-51 5EE0-A nrPDB 158 3e-39 2E87-A nrPDB 142 2e-34 2OHF-A nrPDB 137 6e-33 2QU8-A nrPDB 135 3e-32 3K53-A nrPDB 134 4e-32 1WXQ-A nrPDB 134 6e-32 4A9A-A nrPDB 126 2e-29 2DBY-A nrPDB 125 3e-29 4V7F-o nrPDB 124 5e-29 1JAL-A nrPDB 120 8e-28 1XZP-A nrPDB 114 1e-25 5DN8-A nrPDB 112 3e-25 1NI3-A nrPDB 108 6e-24 Sequences not found previously or not previously below threshold: 2WJG-A nrPDB 102 3e-22 2WJI-A nrPDB 102 3e-22 3J8G-X nrPDB 97 1e-20 3R9W-A nrPDB 95 4e-20 2QTH-A nrPDB 92 3e-19 3A1W-A nrPDB 92 4e-19 3A1U-A nrPDB 92 4e-19 3IBY-A nrPDB 86 3e-17 3LX8-A nrPDB 83 2e-16 2WIC-A nrPDB 81 1e-15 1MKY-A nrPDB 79 3e-15 4R98-A nrPDB 75 5e-14 3GEH-A nrPDB 74 1e-13 5KH0-A nrPDB 74 1e-13 2DYK-A nrPDB 72 3e-13 3GEE-A nrPDB 71 6e-13 3W5J-A nrPDB 71 1e-12 2GJ9-A nrPDB 70 1e-12 5LAD-A nrPDB 70 2e-12 4DCU-A nrPDB 69 3e-12 1WF3-A nrPDB 67 1e-11 5X4B-A nrPDB 64 9e-11 3IEU-A nrPDB 62 3e-10 3PR1-A nrPDB 62 6e-10 4BAS-A nrPDB 54 9e-08 5J8B-z nrPDB 51 7e-07 1SUL-A nrPDB 51 8e-07 5DE3-A nrPDB 50 2e-06 2CXX-A nrPDB 49 3e-06 3H2Y-A nrPDB 49 3e-06 5UCV-A nrPDB 49 4e-06 3CNO-A nrPDB 49 4e-06 4AC9-A nrPDB 49 5e-06 5LZD-z nrPDB 49 5e-06 6G12-A nrPDB 49 5e-06 4ZU9-A nrPDB 48 7e-06 3EC1-A nrPDB 47 1e-05 3IZY-P nrPDB 47 1e-05 1PUJ-A nrPDB 47 2e-05 6GB2-BC nrPDB 46 3e-05 1PUI-A nrPDB 46 3e-05 4DHE-A nrPDB 45 4e-05 4KJZ-A nrPDB 45 4e-05 5IMR-C nrPDB 45 4e-05 3J4J-A nrPDB 45 5e-05 4B44-A nrPDB 45 6e-05 6N8J-m nrPDB 45 6e-05 2LKD-A nrPDB 45 7e-05 3BH6-A nrPDB 44 1e-04 4ZI3-A nrPDB 42 3e-04 6IYB-A nrPDB 42 4e-04 4M9Q-A nrPDB 42 4e-04 5DI3-B nrPDB 42 5e-04 3NXS-A nrPDB 41 7e-04 1F6B-A nrPDB 41 8e-04 6N8N-W nrPDB 41 8e-04 5T62-W nrPDB 41 8e-04 6FT6-s nrPDB 41 8e-04 2QPT-A nrPDB 41 0.001 3TK1-A nrPDB 41 0.001 4ARZ-A nrPDB 40 0.001 4DJT-A nrPDB 40 0.001 2H16-A nrPDB 40 0.001 5OWV-A nrPDB 40 0.002 4V8Y-CP nrPDB 40 0.002 4NCF-A nrPDB 40 0.002 1ZBD-A nrPDB 40 0.002 2YWH-A nrPDB 40 0.002 3PEN-A nrPDB 40 0.002 2AL7-A nrPDB 39 0.002 1X3S-A nrPDB 39 0.003 4QXA-A nrPDB 39 0.003 4ILE-A nrPDB 39 0.003 3WBI-A nrPDB 39 0.003 1YZG-A nrPDB 39 0.003 4V0N-A nrPDB 39 0.003 2H57-A nrPDB 39 0.003 3BCF-A nrPDB 39 0.004 1WMS-A nrPDB 39 0.005 5LDD-C nrPDB 39 0.005 5UB8-A nrPDB 38 0.007 4V8Z-CV nrPDB 38 0.007 5MVF-A nrPDB 38 0.008 5TV4-A nrPDB 38 0.008 2F9L-A nrPDB 38 0.009 3RAB-A nrPDB 38 0.009 2EW1-A nrPDB 38 0.009 5FBL-B nrPDB 37 0.010 1H65-A nrPDB 37 0.011 4UJ4-A nrPDB 37 0.011 2GAO-A nrPDB 37 0.012 4A2I-V nrPDB 37 0.017 6GNI-B nrPDB 37 0.019 1M2O-B nrPDB 37 0.019 4RKF-A nrPDB 37 0.019 1KSG-A nrPDB 36 0.023 2YC4-C nrPDB 36 0.026 2OCB-A nrPDB 36 0.032 3LXX-A nrPDB 36 0.035 5XR6-A nrPDB 36 0.035 3VHL-B nrPDB 35 0.039 3BFK-A nrPDB 35 0.040 1S0U-A nrPDB 35 0.045 1EK0-A nrPDB 35 0.047 3CPJ-B nrPDB 35 0.062 3T5D-A nrPDB 35 0.070 5H7J-A nrPDB 35 0.076 3WYF-A nrPDB 35 0.078 5H7K-A nrPDB 34 0.080 6HLU-A nrPDB 34 0.083 6FEC-S nrPDB 34 0.085 6N0I-A nrPDB 34 0.089 3DPU-A nrPDB 34 0.094 3FTQ-A nrPDB 34 0.095 5W75-A nrPDB 34 0.100 6O81-S nrPDB 34 0.11 2QAG-A nrPDB 34 0.12 3T5G-A nrPDB 34 0.13 3RWM-B nrPDB 34 0.14 3MD0-A nrPDB 33 0.18 3ZJC-A nrPDB 33 0.19 2QAG-C nrPDB 33 0.19 2P5S-A nrPDB 33 0.20 1Z22-A nrPDB 33 0.21 2WWW-A nrPDB 33 0.23 6QUZ-A nrPDB 33 0.25 1G7S-A nrPDB 33 0.26 2IL1-A nrPDB 33 0.26 3FSU-A nrPDB 33 0.28 5NO4-Z nrPDB 32 0.31 3DZ8-A nrPDB 32 0.35 2CJW-A nrPDB 32 0.35 5FG3-A nrPDB 32 0.40 1WDT-A nrPDB 32 0.42 5YT0-A nrPDB 32 0.45 4V6V-A1 nrPDB 32 0.47 2YKR-W nrPDB 32 0.49 5VH6-A nrPDB 32 0.52 4WA8-A nrPDB 32 0.52 3CBQ-A nrPDB 32 0.53 2G3Y-A nrPDB 32 0.57 1RT8-A nrPDB 32 0.63 5JSZ-B nrPDB 31 0.70 2IW3-A nrPDB 31 0.70 4Q7K-A nrPDB 31 0.70 5CYO-A nrPDB 31 0.84 3IIK-A nrPDB 31 0.86 3GP8-A nrPDB 31 1.00 5B3F-A nrPDB 31 1.1 1UBV-A nrPDB 30 1.2 5A5T-C nrPDB 30 1.3 2YV5-A nrPDB 30 1.3 3REG-A nrPDB 30 2.3 3B5X-A nrPDB 29 2.6 4PKU-A nrPDB 29 3.1 4FIN-A nrPDB 29 3.4 5WLN-G nrPDB 29 3.6 1PWU-A nrPDB 29 4.2 3J81-k nrPDB 29 5.6 4V5G-AZ nrPDB 28 6.6 6C2V-A nrPDB 28 6.9 2HF8-A nrPDB 28 8.4 5EUM-A nrPDB 28 8.4 5JZV-A nrPDB 28 8.6 1EFM-A nrPDB 28 8.9 >4CSU-9 nrPDB Length = 390 Score = 594 bits (1532), Expect = e-170, Method: Composition-based stats. Identities = 390/390 (100%), Positives = 390/390 (100%) Query: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR Sbjct: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 Query: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG Sbjct: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 Query: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS Sbjct: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 Query: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV Sbjct: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 Query: 241 LLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAI 300 LLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAI Sbjct: 241 LLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAI 300 Query: 301 AEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQ 360 AEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQ Sbjct: 301 AEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQ 360 Query: 361 LEEIAEEDDEDWDDDWDEDDEEGVEFIYKR 390 LEEIAEEDDEDWDDDWDEDDEEGVEFIYKR Sbjct: 361 LEEIAEEDDEDWDDDWDEDDEEGVEFIYKR 390 >5M04-A nrPDB Length = 360 Score = 510 bits (1313), Expect = e-145, Method: Composition-based stats. Identities = 340/340 (100%), Positives = 340/340 (100%) Query: 1 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 60 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR Sbjct: 21 MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYR 80 Query: 61 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 120 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG Sbjct: 81 FEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKG 140 Query: 121 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS Sbjct: 141 GWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 200 Query: 181 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 240 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV Sbjct: 201 AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRV 260 Query: 241 LLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAI 300 LLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAI Sbjct: 261 LLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAI 320 Query: 301 AEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQA 340 AEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQA Sbjct: 321 AEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQA 360 >1LNZ-A nrPDB Length = 342 Score = 404 bits (1038), Expect = e-113, Method: Composition-based stats. Identities = 163/334 (48%), Positives = 233/334 (69%), Gaps = 3/334 (0%) Query: 3 FVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYRFE 62 FVD+ + V GDGGNG V+FRREKY+PKGGP GGDGG GGDV E DE L TL+D+R++ Sbjct: 2 FVDQVKVYVKGGDGGNGMVAFRREKYVPKGGPAGGDGGKGGDVVFEVDEGLRTLMDFRYK 61 Query: 63 KSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKGGW 122 K F+A RG++G S++ G+ D+ IKVP GT V D T + + D+T+HGQR ++A+GG Sbjct: 62 KHFKAIRGEHGMSKNQHGRNADDMVIKVPPGTVVTDDDTKQVIADLTEHGQRAVIARGGR 121 Query: 123 HGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAA 182 G GN+RF + N P+ NG PG +R ++LEL +LADVG++G P+ GKST + VS+A Sbjct: 122 GGRGNSRFATPANPAPQLSENGEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSA 181 Query: 183 KPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLL 242 KPK+ADY FTTLVP+LG+V D+ +SFV+AD+PGLIEGA +G GLG +FL+H+ER RV++ Sbjct: 182 KPKIADYHFTTLVPNLGMVETDDGRSFVMADLPGLIEGAHQGVGLGHQFLRHIERTRVIV 241 Query: 243 HLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAE 302 H+ID+ ++G DP ++ I EL +Y+ L +P+ +V NK+D+ EA E +A E Sbjct: 242 HVIDMSGLEGRDPYDDYLTINQELSEYNLRLTERPQIIVANKMDM---PEAAENLEAFKE 298 Query: 303 ALGWEDKYYLISAASGLGVKDLCWDVMTFIIENP 336 L + + ISA + G+++L ++V + P Sbjct: 299 KLTDDYPVFPISAVTREGLRELLFEVANQLENTP 332 >1UDX-A nrPDB Length = 416 Score = 359 bits (921), Expect = 1e-99, Method: Composition-based stats. Identities = 151/323 (46%), Positives = 212/323 (65%), Gaps = 10/323 (3%) Query: 3 FVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGDVWMEADENLNTLIDYRFE 62 F D I V AG GG+G VSFRREK++PKGGPDGGDGG GG V++ A ++++L + Sbjct: 2 FQDVLVITVAAGRGGDGAVSFRREKFVPKGGPDGGDGGRGGSVYLRARGSVDSLSRLS-K 60 Query: 63 KSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTGETMGDMTKHGQRLLVAKGGW 122 ++++AE G++G G+ G+D+ I+VP GTRV D TGE + D+T+ GQ +LVA+GG Sbjct: 61 RTYKAEDGEHGRGSQQHGRGGEDLVIEVPRGTRVFDADTGELLADLTEEGQTVLVARGGA 120 Query: 123 HGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAA 182 G GN F S + PR G G+KR L LELML+ADVG++G PNAGKS+ + A++ A Sbjct: 121 GGRGNMHFVSPTRQAPRFAEAGEEGEKRRLRLELMLIADVGLVGYPNAGKSSLLAAMTRA 180 Query: 183 KPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLL 242 PK+A YPFTTL P+LGVV + E+ F +ADIPG+IEGA+EG GLG+ FL+H+ R RVLL Sbjct: 181 HPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASEGKGLGLEFLRHIARTRVLL 240 Query: 243 HLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAE 302 +++D +P++ + E+ Y L +P + NK+DLL+ EE KA+A+ Sbjct: 241 YVLDAAD----EPLKTLETLRKEVGAYDPALLRRPSLVALNKVDLLE----EEAVKALAD 292 Query: 303 ALGWEDKYY-LISAASGLGVKDL 324 AL E +SA +G G+ L Sbjct: 293 ALAREGLAVLPVSALTGAGLPAL 315 >5ZZM-A nrPDB Length = 426 Score = 198 bits (503), Expect = 3e-51, Method: Composition-based stats. Identities = 64/269 (23%), Positives = 111/269 (41%), Gaps = 37/269 (13%) Query: 119 KGGWHGLG-------------NTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGML 165 KGG G R +R R + G + + + + V ++ Sbjct: 147 KGGIGLRGPGETQLETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKAD---VPTVSLV 203 Query: 166 GMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGA 225 G NAGKST ++ A+ AD F TL P+L + + + V+AD G I Sbjct: 204 GYTNAGKSTLFNRITEARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDL 263 Query: 226 GLGIR-FLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNK 284 + L+ + +LLH+ID + + +E ++ E++ + P LV NK Sbjct: 264 VAAFKATLQETRQATLLLHVIDAADVRVQENIEAVNTVLEEIDAH-----EIPTLLVMNK 318 Query: 285 IDLLD----KVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQA 340 ID+L+ +++ +E+ K ++ +L SA +G G+ L + +T + V Q Sbjct: 319 IDMLEDFEPRIDRDEENK--------PNRVWL-SAQTGAGIPQL-FQALTERLSGEVAQH 368 Query: 341 EEAKQPEKVEFMWDDYHRQQLE-EIAEED 368 P++ Y Q +E E EED Sbjct: 369 TLRLPPQEGRLRSRFYQLQAIEKEWMEED 397 >5EE0-A nrPDB Length = 395 Score = 158 bits (400), Expect = 3e-39, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 17/177 (9%) Query: 141 KTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGV 200 K + P + R +L +G++G+PN GKSTF V+ ++PF T+ P+ Sbjct: 8 KKDAAPAE-RPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEAR 66 Query: 201 VRMDNEKS----------------FVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHL 244 V + +E+ + DI GL+ GA G GLG FL H+ + H+ Sbjct: 67 VYVPDERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHV 126 Query: 245 IDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIA 301 + ++++ + +LE ++L K V NKID L+K K + Sbjct: 127 LRAFEDKEVTHIDDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQLK 183 >2E87-A nrPDB Length = 357 Score = 142 bits (359), Expect = 2e-34, Method: Composition-based stats. Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 26/220 (11%) Query: 148 DKRELLLELML----LADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRM 203 RE+L +L + + V + G PN GKST ++A++ AKP++A YPFTT ++G Sbjct: 152 KAREVLKDLPVVDLEIPTVVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVGQFE- 210 Query: 204 DNEKSFVVADIPGLIEGAAEGAG-------LGIRFLKHLERCRVLLHLIDIDPIDGTDPV 256 D + + D PGL++ L +R+L +L ++++ D G P+ Sbjct: 211 DGYFRYQIIDTPGLLDRPISERNEIEKQAILALRYLGNL-----IIYIFDPSEHCGF-PL 264 Query: 257 ENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAA 316 E + E+ +DL P +V NKID+ D+ + K + E K ISA Sbjct: 265 EEQIHLFEEVHGEFKDL---PFLVVINKIDVADEENIKRLEKFVKEKGLNPIK---ISAL 318 Query: 317 SGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDY 356 G G+ DL + + + P+ + ++ E+ + Y Sbjct: 319 KGTGI-DLVKEEIIKTLR-PLAEKVAREKIERELRRYRSY 356 >2OHF-A nrPDB Length = 396 Score = 137 bits (346), Expect = 6e-33, Method: Composition-based stats. Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 30/186 (16%) Query: 141 KTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGV 200 K G ++ +G++G+PN GKSTF ++ ++ ++PF T+ P+ Sbjct: 4 KKGGDGIKPPPIIGRFGTSLKIGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESR 63 Query: 201 VRMDNEK----------------SFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHL 244 V + +E+ V DI GL++GA G GLG FL H+ C + HL Sbjct: 64 VPVPDERFDFLCQYHKPASKIPAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHL 123 Query: 245 I------DIDPIDG-TDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKA 297 DI ++G DP+ + II EL+ +++ P ID L+KV Sbjct: 124 TRAFEDDDITHVEGSVDPIRDIEIIHEELQLKDEEMIG-PI------IDKLEKVAVRGGD 176 Query: 298 KAIAEA 303 K + Sbjct: 177 KKLKPE 182 >2QU8-A nrPDB Length = 228 Score = 135 bits (340), Expect = 3e-32, Method: Composition-based stats. Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 18/197 (9%) Query: 160 ADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNE-KSFVVADIPGLI 218 + + G PN GKS+F+ VS A V Y FTT +L V D++ + + D PGL+ Sbjct: 30 KTIILSGAPNVGKSSFMNIVSRANVDVQSYSFTT--KNLYVGHFDHKLNKYQIIDTPGLL 87 Query: 219 EGAAEGAG----LGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLA 274 + A E I L H+ V+L +IDI G E + S +S Sbjct: 88 DRAFENRNTIEMTTITALAHI--NGVILFIIDISEQCGLTIKEQINLFYSIKSVFS---- 141 Query: 275 TKPRWLVFNKIDL--LDKVEAEEK--AKAIAEALGWEDKYYLISAASGLGVKDLCWDVMT 330 K + FNKID +D + + K K I + + K+ S +G+GV+ Sbjct: 142 NKSIVIGFNKIDKCNMDSLSIDNKLLIKQILDNVKNPIKFSSFSTLTGVGVEQAKITA-C 200 Query: 331 FIIENPVVQAEEAKQPE 347 +++N ++ Q + Sbjct: 201 ELLKNDQAESILLDQEQ 217 >3K53-A nrPDB Length = 271 Score = 134 bits (338), Expect = 4e-32, Method: Composition-based stats. Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 16/170 (9%) Query: 157 MLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPG 216 M+L V ++G PN GK+T A++ + V ++P T+ G++ EK F+V D+PG Sbjct: 1 MVLKTVALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIMEY-REKEFLVVDLPG 59 Query: 217 LIEGAAEGAGLGIRFLKHLERCRVLLHLID--IDPIDGTDPVENARIIISELEKYSQDLA 274 + A + + R +L D +D +D T + N + + E + Sbjct: 60 IYSLTAHSID------ELIARNFILDGNADVIVDIVDSTCLMRNLFLTLELFE-----ME 108 Query: 275 TKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDL 324 K LV NK DLL K A+ K + + LG +A G GV++L Sbjct: 109 VKNIILVLNKFDLLKKKGAKIDIKKMRKELGVP--VIPTNAKKGEGVEEL 156 >1WXQ-A nrPDB Length = 397 Score = 134 bits (337), Expect = 6e-32, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 48/204 (23%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRM------------DNEKS 208 ++G++G PN GKSTF A + ++A+YPFTT+ ++GV N ++ Sbjct: 2 EIGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIEANVGVTYAITDHPCKELGCSPNPQN 61 Query: 209 F-----------VVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDID--------P 249 + + D+ GL+ GA EG GLG +FL L L+H++D P Sbjct: 62 YEYRNGLALIPVKMVDVAGLVPGAHEGRGLGNKFLDDLRMASALIHVVDATGKTDPEGQP 121 Query: 250 IDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDK 309 D DPVE+ + E++ + + +K W F K L K++ E AIAE L Sbjct: 122 TDYHDPVEDIEFLEREIDYWIYGILSK-GWDKFAKRIKLQKIKLES---AIAEHL----- 172 Query: 310 YYLISAASGLGVKDL-CWDVMTFI 332 SG+GV + W+ M + Sbjct: 173 -------SGIGVNENDVWEAMHKL 189 >4A9A-A nrPDB Length = 376 Score = 126 bits (316), Expect = 2e-29, Method: Composition-based stats. Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 9/156 (5%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI 218 +A VG +G P+ GKST + ++ + + A+Y FTTLV GV+R K + D+PG+I Sbjct: 72 VASVGFVGFPSVGKSTLLSKLTGTESEAAEYEFTTLVTVPGVIRYKGAK-IQMLDLPGII 130 Query: 219 EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 +GA +G G G + + C +L ++D++ P+ + +II ELE L P Sbjct: 131 DGAKDGRGRGKQVIAVARTCNLLFIILDVN-----KPLHHKQIIEKELEGVGIRLNKTPP 185 Query: 279 WLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLIS 314 ++ K +K LG ++ ++S Sbjct: 186 DILIKKK---EKGGISITNTVPLTHLGNDEIRAVMS 218 >2DBY-A nrPDB Length = 368 Score = 125 bits (314), Expect = 3e-29, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 31/238 (13%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVV------- 211 + VG++G+PN GKST A++ A A+YPF T+ ++GVV +++E+ + + Sbjct: 1 MLAVGIVGLPNVGKSTLFNALTRANALAANYPFATIDKNVGVVPLEDERLYALQRTFAKG 60 Query: 212 -------------ADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDP-------ID 251 DI GL++GA +G GLG +FL H+ + H++ P + Sbjct: 61 ERVPPVVPTHVEFVDIAGLVKGAHKGEGLGNQFLAHIREVAAIAHVLRCFPDPDVVHVMG 120 Query: 252 GTDPVENARIIISE-LEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEAL--GWED 308 DP+E+A ++ +E L L + L +++ E A+ + L G Sbjct: 121 RVDPLEDAEVVETELLLADLATLERRLERLRKEARADRERLPLLEAAEGLYVHLQEGKPA 180 Query: 309 KYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAE 366 + + S A +K+ +I V AEE + + R+ LEE AE Sbjct: 181 RTFPPSEAVARFLKETPLLTAKPVIYVANV-AEEDLPDGRGNPQVEAVRRKALEEGAE 237 >4V7F-o nrPDB Length = 647 Score = 124 bits (312), Expect = 5e-29, Method: Composition-based stats. Identities = 43/193 (22%), Positives = 78/193 (40%), Gaps = 15/193 (7%) Query: 164 MLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEK-SFVVADIPGLIEGAA 222 + G PN GKS+F+R ++ + V Y FTT SL V D + F D PG+++ Sbjct: 172 ICGYPNVGKSSFLRCITKSDVDVQPYAFTT--KSLYVGHFDYKYLRFQAIDTPGILDRPT 229 Query: 223 EGAG----LGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 E I + HL C +L+ +D+ G ++ S A K Sbjct: 230 EEMNNIEMQSIYAIAHLRSC--VLYFMDLSEQCGFTIEAQVKLFHS----IKPLFANKSV 283 Query: 279 WLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVV 338 +V NK D++ + +E+ + E++ +++ S +++ +V E + Sbjct: 284 MVVINKTDIIRPEDLDEERAQLLESVKEVPGVEIMT--SSCQLEENVMEVRNKACEKLLA 341 Query: 339 QAEEAKQPEKVEF 351 E K + Sbjct: 342 SRIENKLKSQSRI 354 >1JAL-A nrPDB Length = 363 Score = 120 bits (302), Expect = 8e-28, Method: Composition-based stats. Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 23/127 (18%) Query: 163 GMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVV----------- 211 G++G+PN GKST A++ A + A+YPF T+ P+ GVV M + + + Sbjct: 6 GIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPERILP 65 Query: 212 -----ADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLI------DIDPIDG-TDPVENA 259 DI GL+ GA++G GLG +FL ++ + H++ DI + G DP+++ Sbjct: 66 TTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGHVVRCFENDDIVHVAGKIDPLDDI 125 Query: 260 RIIISEL 266 I +EL Sbjct: 126 DTINTEL 132 >1XZP-A nrPDB Length = 482 Score = 114 bits (284), Expect = 1e-25, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 23/166 (13%) Query: 164 MLGMPNAGKSTFIRAV-SAAKPKVADYPFTTLV--PSLGVVRMDNEKSFVVADIPGLIEG 220 ++G PN GKST + + + + V D P TT V+R F + D G+ Sbjct: 248 IVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIR---GILFRIVDTAGVRSE 304 Query: 221 AAE-GAGLGI-RFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 + LGI R L+ +E+ ++L ++D P++ E K + + K Sbjct: 305 TNDLVERLGIERTLQEIEKADIVLFVLDAS-----SPLD------EEDRKILERIKNKRY 353 Query: 279 WLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDL 324 +V NK+D+++K+ EE I LG + ISA G G++ L Sbjct: 354 LVVINKVDVVEKINEEE----IKNKLGTDRHMVKISALKGEGLEKL 395 >5DN8-A nrPDB Length = 446 Score = 112 bits (280), Expect = 3e-25, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 22/181 (12%) Query: 158 LLADVGMLGMPNAGKSTFIRAVSAAKPK-VADYPFTTLVPSLGVVRMDNEKSFVVADIPG 216 +L + ++G PN GKST ++ ++ VAD P T G +D+++ ++ D G Sbjct: 4 MLPVIAIVGRPNVGKSTLFNYLTKSRAALVADVPGVTRDRQYGETTIDSQRL-LLVDTGG 62 Query: 217 LIEGAAEGAG--LGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLA 274 L++ + + + ++ +L L+D G P + II L K Sbjct: 63 LVDTENKEVAPLAETQVEQAIDESDCILFLVDAKA--GLVPAD--EIIAERLRKKG---- 114 Query: 275 TKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIE 334 K +L NK D + + + Y+I+AASG GVKDL MT ++E Sbjct: 115 -KKIFLAVNKADRARAAVVQSDFYKL-----GFGEPYVIAAASGRGVKDL----MTQVLE 164 Query: 335 N 335 N Sbjct: 165 N 165 Score = 79.4 bits (194), Expect = 2e-15, Method: Composition-based stats. Identities = 48/224 (21%), Positives = 79/224 (35%), Gaps = 37/224 (16%) Query: 161 DVGMLGMPNAGKSTFIRA-VSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIE 219 + M+G PN GKST I + + V D P TT S+ + N++++ + D G+ Sbjct: 180 KIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRD-SIYIPFARNDENYTLIDTAGIRR 238 Query: 220 GAA----EGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAT 275 A I+ L+ + V++ L+D + I+ A Sbjct: 239 RAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVTEQDLRLLNRIVE---------AG 289 Query: 276 KPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKY--YLISAASGLGV------------ 321 + NK D L+ E + AI + + D Y ISA G GV Sbjct: 290 VSLIIAVNKWDGLNIEERDNVRNAIDRRMPFVDFARRYFISALHGTGVGKLFRAIQESYQ 349 Query: 322 ---KDLCWDVMTFIIENPVVQAEEAKQP--EKVEFMWDDYHRQQ 360 ++L +T +E V + E P + H Sbjct: 350 SIQQELTTGQLTRALEKAVAEHE---PPLVKGRRIRLRYAHLGA 390 >1NI3-A nrPDB Length = 392 Score = 108 bits (269), Expect = 6e-24, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 96/238 (40%), Gaps = 33/238 (13%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKP-KVADYPFTTLVPSLGVVRMDNEKS----------- 208 G++GMPN GKSTF RA++ + A+YP+ T+ P V + +E+ Sbjct: 22 KTGIVGMPNVGKSTFFRAITKSVLGNPANYPYATIDPEEAKVAVPDERFDWLCEAYKPKS 81 Query: 209 -----FVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLI------DIDPIDG-TDPV 256 V DI GL +GA+ G GLG FL H+ + ++ +I ++G DP+ Sbjct: 82 RVPAFLTVFDIAGLTKGASTGVGLGNAFLSHVRAVDAIYQVVRAFDDAEIIHVEGDVDPI 141 Query: 257 ENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAA 316 + II+ EL + K KI E KAK +A+ K Y Sbjct: 142 RDLSIIVDELLIKDAEFVEK-HLEGLRKITSRGANTLEMKAKKEEQAIIE--KVYQYLTE 198 Query: 317 SGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQ------QLEEIAEED 368 + ++ W I N + V D+ RQ ++++ +E+ Sbjct: 199 TKQPIRKGDWSNREVEIINSLYLLTAKPVIYLVNMSERDFLRQKNKYLPKIKKWIDEN 256 >2WJG-A nrPDB Length = 188 Score = 102 bits (254), Expect = 3e-22, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 15/165 (9%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEG 220 ++ ++G PN GKST A++ + ++P T+ G + EK F V D+PG+ Sbjct: 9 EIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEK-FKVVDLPGVYSL 67 Query: 221 AAEGAGLGIRFLKHL-ERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRW 279 A I + E+ ++++++D ++ N + + +E Sbjct: 68 TANSIDEIIARDYIINEKPDLVVNIVDATALE-----RNLYLTLQLME------MGANLL 116 Query: 280 LVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDL 324 L NK+DL + E + + LG K +SAA +G+++L Sbjct: 117 LALNKMDLAKSLGIEIDVDKLEKILG--VKVVPLSAAKKMGIEEL 159 >2WJI-A nrPDB Length = 165 Score = 102 bits (253), Expect = 3e-22, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 15/165 (9%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEG 220 ++ ++G PN GKST A++ + ++P T+ G + EK F V D+PG+ Sbjct: 5 EIALIGNPNVGKSTIFNALTGENVYIGNWPGVTVEKKEGEFEYNGEK-FKVVDLPGVYSL 63 Query: 221 AAEGAGLGIRFLKHL-ERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRW 279 A I + E+ ++++++D ++ N + + +E Sbjct: 64 TANSIDEIIARDYIINEKPDLVVNIVDATALE-----RNLYLTLQLME------MGANLL 112 Query: 280 LVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDL 324 L NK+DL + E + + LG K +SAA +G+++L Sbjct: 113 LALNKMDLAKSLGIEIDVDKLEKILG--VKVVPLSAAKKMGIEEL 155 >3J8G-X nrPDB Length = 490 Score = 97.5 bits (241), Expect = 1e-20, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 19/187 (10%) Query: 158 LLADVGMLGMPNAGKSTFIRAVSAAK-PKVADYPFTTLVPSLGVVRMDNEKSFVVADIPG 216 ++ V ++G PN GKST ++ + VAD+P T G ++ + F+ D G Sbjct: 1 MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEIEG-REFICIDTGG 59 Query: 217 LIEGAAEGA--GLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLA 274 + +G +G + + L +E V+L ++D G P + A Sbjct: 60 I-DGTEDGVETRMAEQSLLAIEEADVVLFMVDARA--GLMPADEAI-------AKHLRSR 109 Query: 275 TKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIE 334 KP +LV NK D LD +A ++ + Y I+A+ G GV L V+ +E Sbjct: 110 EKPTFLVANKTDGLDPDQAVVDFYSL-----GLGEIYPIAASHGRGVLSLLEHVLLPWME 164 Query: 335 NPVVQAE 341 + Q E Sbjct: 165 DLAPQEE 171 Score = 72.5 bits (176), Expect = 3e-13, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 17/171 (9%) Query: 161 DVGMLGMPNAGKSTFIR-AVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIE 219 + ++G PN GKST + + V D P TT + + + +V+ D G+ + Sbjct: 204 KLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPME-RDGREYVLIDTAGVRK 262 Query: 220 GAA----EGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAT 275 I+ L+ +E V++ +ID + I++ + Sbjct: 263 RGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGISDQDLSLLGFILN---------SG 313 Query: 276 KPRWLVFNKIDLLDKVEAEEKAKAIAEALGWED--KYYLISAASGLGVKDL 324 + +V NK D L + E+ + + LG+ D + + ISA G GV +L Sbjct: 314 RSLVIVVNKWDGLSQEVKEQVKETLDFRLGFIDFARVHFISALHGSGVGNL 364 >3R9W-A nrPDB Length = 307 Score = 95.2 bits (235), Expect = 4e-20, Method: Composition-based stats. Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 15/186 (8%) Query: 157 MLLADVGMLGMPNAGKSTFIRAVSAAKPK-VADYPFTTLVPSLGVVRMDNEKSFVVADIP 215 M + V ++G PN GKST + + K ++ TT + LGV + NE + D P Sbjct: 7 MKVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNEAQIIFLDTP 66 Query: 216 GLIEGAAEGAGLGIRFL----KHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQ 271 G+ E + LG + + LE V+L +ID G P + E+ + Sbjct: 67 GIYE-PKKSDVLGHSMVEIAKQSLEEADVILFMIDATE--GWRPRD------EEIYQNFI 117 Query: 272 DLATKPRWLVFNKIDLLDK-VEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMT 330 KP +V NKID + I + + ISA G + +L ++ Sbjct: 118 KPLNKPVIVVINKIDKIGPAKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILK 177 Query: 331 FIIENP 336 ++ E Sbjct: 178 YLPEGE 183 >2QTH-A nrPDB Length = 364 Score = 92.1 bits (227), Expect = 3e-19, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 79/200 (39%), Gaps = 17/200 (8%) Query: 140 QKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLG 199 K +KR + +G++G N+GK++ +++ KV FTT+ P Sbjct: 166 FKEKSIESNKR------NNIPSIGIVGYTNSGKTSLFNSLTGLTQKVDTKLFTTMSPKRY 219 Query: 200 VVRMDNEKSFVVADIPGLIEG-AAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVEN 258 + ++N + ++ D G I G + L + L+ +ID + +E Sbjct: 220 AIPINN-RKIMLVDTVGFIRGIPPQIVDAFFVTLSEAKYSDALILVIDSTFSENL-LIET 277 Query: 259 ARIIISELEKYSQDLATKPRWLVFNKIDLL--DKVEAEEKAKAIAEALGWEDK-YYLISA 315 + L + ++ KP + NKID + D + + + +++ L ISA Sbjct: 278 LQSSFEILREIG--VSGKPILVTLNKIDKINGDLYKKLDLVEKLSKELYSPIFDVIPISA 335 Query: 316 ASGLG---VKDLCWDVMTFI 332 ++D + + T + Sbjct: 336 LKRTNLELLRDKIYQLATQL 355 >3A1W-A nrPDB Length = 168 Score = 92.1 bits (227), Expect = 4e-19, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 71/179 (39%), Gaps = 17/179 (9%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI 218 + V + G PN GK++ A++ K VA++P T+ GV + + D+PG Sbjct: 5 MVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKG-YTINLIDLPGTY 63 Query: 219 EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPI--DGTDPVENARIIISELEKYSQDLATK 276 + + R +L D+ + D +P ++ +++ LE K Sbjct: 64 SLGYSSID------EKIARDYLLKGDADLVILVADSVNPEQSLYLLLEILE------MEK 111 Query: 277 PRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIEN 335 L ID K + + + LG S+ +G G+++L ++ + +N Sbjct: 112 KVILAMTAIDEAKKTGMKIDRYELQKHLG--IPVVFTSSVTGEGLEELKEKIVEYAQKN 168 >3A1U-A nrPDB Length = 258 Score = 92.1 bits (227), Expect = 4e-19, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 77/194 (39%), Gaps = 17/194 (8%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI 218 + V + G PN GK++ A++ K VA++P T+ GV + + D+PG Sbjct: 5 MVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKG-YTINLIDLPGTY 63 Query: 219 EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPI--DGTDPVENARIIISELEKYSQDLATK 276 + + R +L D+ + D +P ++ +++ LE K Sbjct: 64 SLGYSSID------EKIARDYLLKGDADLVILVADSVNPEQSLYLLLEILE------MEK 111 Query: 277 PRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENP 336 L ID K + + + LG S+ +G G+++L ++ + +N Sbjct: 112 KVILAMTAIDEAKKTGMKIDRYELQKHLG--IPVVFTSSVTGEGLEELKEKIVEYAQKNT 169 Query: 337 VVQAEEAKQPEKVE 350 ++ EKVE Sbjct: 170 ILHRMILDYGEKVE 183 >3IBY-A nrPDB Length = 256 Score = 85.9 bits (211), Expect = 3e-17, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 64/166 (38%), Gaps = 19/166 (11%) Query: 164 MLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAE 223 ++G PN GK+T A++ A +V ++P T+ G + E + D+PG+ A Sbjct: 6 LIGNPNCGKTTLFNALTNANQRVGNWPGVTVEKKTGEF-LLGEHLIEITDLPGVYSLVAN 64 Query: 224 GAGLG----IRFLKHLE-RCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 G+ I ++ ++++ID ++ + + E KP Sbjct: 65 AEGISQDEQIAAQSVIDLEYDCIINVIDACHLE-----RHLYLTSQLFE------LGKPV 113 Query: 279 WLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDL 324 + N +D+ + + + LG I A +G+ L Sbjct: 114 VVALNMMDIAEHRGISIDTEKLESLLGCS--VIPIQAHKNIGIPAL 157 >3LX8-A nrPDB Length = 272 Score = 82.9 bits (203), Expect = 2e-16, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 80/224 (35%), Gaps = 35/224 (15%) Query: 158 LLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGL 217 + ++ ++G PN+GK++ ++ +V ++P T+ G+V K + D+PG+ Sbjct: 2 SMTEIALIGNPNSGKTSLFNLITGHNQRVGNWPGVTVERKSGLV--KKNKDLEIQDLPGI 59 Query: 218 IEG---AAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLA 274 + E L +R +L+++D ++ N + +E Sbjct: 60 YSMSPYSPEEKVARDYLLS--QRADSILNVVDATNLE-----RNLYLTTQLIE------T 106 Query: 275 TKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVK------------ 322 P + N ID+LD + ++ LG SA GV Sbjct: 107 GIPVTIALNMIDVLDGQGKKINVDKLSYHLGVP--VVATSALKQTGVDQVVKKAAHTTTS 164 Query: 323 ---DLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQLEE 363 DL + + +E + Q E + Y + E+ Sbjct: 165 TVGDLAFPIYDDRLEAAISQILEVLGNSVPQRSARFYAIKLFEQ 208 >2WIC-A nrPDB Length = 267 Score = 80.5 bits (197), Expect = 1e-15, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 66/168 (39%), Gaps = 9/168 (5%) Query: 157 MLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPG 216 M VG++G PN+GK+T ++ A+ +V ++ T+ G+ + + + D+PG Sbjct: 1 MQKLTVGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGIFATTDHQ-VTLVDLPG 59 Query: 217 LIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATK 276 I L+ +++ D + V+ + + + Sbjct: 60 TYSLTT------ISSQTSLDEQIACHYILSGDADMLINVVDASNLERNLYLTLQLLELGI 113 Query: 277 PRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDL 324 P + N +D+ +K + A+A LG + + G G++ L Sbjct: 114 PCVVALNMLDIAEKQQVRIDIDALAARLGCP--VIPLVSTRGRGIEAL 159 >1MKY-A nrPDB Length = 439 Score = 79.0 bits (193), Expect = 3e-15, Method: Composition-based stats. Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 24/202 (11%) Query: 139 RQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRA-VSAAKPKVADYPFTTLVPS 197 + + G + + E+ V ++G PN GKST A ++ + V+ P TT P Sbjct: 163 KLEEKGLDLESKP---EITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPV 219 Query: 198 LGVVRMDNEKSFVVADIPGLIE----GAAEGAGLGI-RFLKHLERCRVLLHLIDIDPIDG 252 V +D + +V D GL R + +E+ V++ ++D G Sbjct: 220 DDEVFIDG-RKYVFVDTAGLRRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQ--G 276 Query: 253 TDPVENARIIISELEKYSQDLATKPRWLVFNKIDLL--DKVEAEEKAKAIAEALGWEDKY 310 + + E + +VFNK DL+ + +E K E L + D Sbjct: 277 ITRQDQRMAGLMERRG-------RASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYS 329 Query: 311 YLI--SAASGLGVKDLCWDVMT 330 LI SA G + + D M Sbjct: 330 PLIFTSADKGWNIDRMI-DAMN 350 Score = 74.0 bits (180), Expect = 1e-13, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 16/179 (8%) Query: 159 LADVGMLGMPNAGKSTFIRAVS-AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGL 217 +A V ++G PN GKST + K V D T P V K+F + D G+ Sbjct: 1 MATVLIVGRPNVGKSTLFNKLVKKKKAIVEDEEGVTRDPVQDTVEW-YGKTFKLVDTCGV 59 Query: 218 IEGAAEGAGLGIR--FLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAT 275 + + ++ L + ++L ++D + E +T Sbjct: 60 FDNPQDIISQKMKEVTLNMIREADLVLFVVDG---------KRGITKEDESLADFLRKST 110 Query: 276 KPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIE 334 LV NK + L + E E K + + G +SA + + + ++ + E Sbjct: 111 VDTILVANKAENLREFEREVKPELYSLGFGEPI---PVSAEHNINLDTMLETIIKKLEE 166 >4R98-A nrPDB Length = 271 Score = 75.2 bits (183), Expect = 5e-14, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 58/151 (38%), Gaps = 7/151 (4%) Query: 157 MLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPG 216 M +G++G PN+GK+T ++ ++ +V ++ T+ G + + + D+PG Sbjct: 1 MKKLTIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTDHQ-VTLVDLPG 59 Query: 217 LIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATK 276 I L+ +++ D + V+ + + + Sbjct: 60 TYSLTT------ISSQTSLDEQIACHYILSGDADLLINVVDASNLERNLYLTLQLLELGI 113 Query: 277 PRWLVFNKIDLLDKVEAEEKAKAIAEALGWE 307 P + N +D+ +K + A++ LG Sbjct: 114 PCIVALNMLDIAEKQNIRIEIDALSARLGCP 144 >3GEH-A nrPDB Length = 462 Score = 74.0 bits (180), Expect = 1e-13, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 70/186 (37%), Gaps = 19/186 (10%) Query: 161 DVGMLGMPNAGKSTFIRAVSAA-KPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIE 219 V ++G PN GKS+ + A S + + V D P TT + + V D G+ E Sbjct: 226 KVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQL-VVGGIPVQVLDTAGIRE 284 Query: 220 GAAEGAGLGI-RFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 + + +G+ R + ++L ID G + + + + +P Sbjct: 285 TSDQVEKIGVERSRQAANTADLVLLTIDAA--TGWTTGDQ---------EIYEQVKHRPL 333 Query: 279 WLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVV 338 LV NKIDL++K E + +AA G+ L ++ + V Sbjct: 334 ILVMNKIDLVEKQLITS-----LEYPENITQIVHTAAAQKQGIDSLETAILEIVQTGKVQ 388 Query: 339 QAEEAK 344 A+ Sbjct: 389 AADMDL 394 >5KH0-A nrPDB Length = 396 Score = 74.0 bits (180), Expect = 1e-13, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 63/164 (38%), Gaps = 18/164 (10%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKPK-VADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEG 220 + + G N GKS+F+ A+ + V++ TT P + + + D PGL + Sbjct: 11 IAITGRRNVGKSSFMNALIGQEVSIVSNVAGTTTDPVFKSMELSPVGPITLIDTPGLDDV 70 Query: 221 AAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWL 280 G + K L R + ++D P + E + ELE P ++ Sbjct: 71 GELGIKRIKKAKKSLYRADCGILIVDDIPGNFE---EQIIKLFKELE--------IPYFI 119 Query: 281 VFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDL 324 NKID +D E++ K +SA +G + + Sbjct: 120 AINKIDTIDHENIEKEYKKY------NVPILKVSALKKIGFEKI 157 >2DYK-A nrPDB Length = 161 Score = 72.5 bits (176), Expect = 3e-13, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 49/132 (37%), Gaps = 11/132 (8%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAK-PKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIE 219 V ++G PN GKS+ + + VAD P T GVV D + F++ D GL Sbjct: 3 KVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRGR-FLLVDTGGLWS 61 Query: 220 GAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRW 279 G + + + LE V+L +D E A + KP Sbjct: 62 GDKWEKKIQEKVDRALEDAEVVLFAVDGRAELTQADYEVAEYLRR---------KGKPVI 112 Query: 280 LVFNKIDLLDKV 291 LV K+D Sbjct: 113 LVATKVDDPKHE 124 >3GEE-A nrPDB Length = 476 Score = 71.3 bits (173), Expect = 6e-13, Method: Composition-based stats. Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 14/163 (8%) Query: 164 MLGMPNAGKSTFIRAVSA-AKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAA 222 + G PNAGKST + + + V+ P TT + ++ F + D GL E Sbjct: 238 IAGKPNAGKSTLLNTLLGQERAIVSHMPGTTRDYIE-ECFIHDKTMFRLTDTAGLREAGE 296 Query: 223 EGAGLGIRFLK-HLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLV 281 E GIR + + ++L+L+D+ GT+ +++ I EL+ V Sbjct: 297 EIEHEGIRRSRMKMAEADLILYLLDL----GTERLDDELTEIRELKAAHPAAK---FLTV 349 Query: 282 FNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDL 324 NK+D A+ +AIA+ G E ISA +G G+ L Sbjct: 350 ANKLD--RAANADALIRAIADGTGTE--VIGISALNGDGIDTL 388 >3W5J-A nrPDB Length = 204 Score = 70.5 bits (171), Expect = 1e-12, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 71/179 (39%), Gaps = 18/179 (10%) Query: 160 ADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIE 219 + +LGMPN GKST ++ +V ++P T+ G + + + D+PG+ + Sbjct: 4 KRIALLGMPNTGKSTLFNRMTGGAARVGNWPGITVELLSGKI-LLGADMVEIIDLPGIYD 62 Query: 220 --GAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKP 277 G ++ + FL H + L +++ I+ +++ + Sbjct: 63 LHGFSDDEQVVRHFL-HDNVPDLALVILNATQIE-----RQMSLLLQLKQ------LNMN 110 Query: 278 RWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENP 336 ++ N D + ++ ++E L + + +S G G ++ +T + P Sbjct: 111 IVVLLNMSDEAKQYGITIDSRKMSELL--QIPVFQLSGKYGTGYQEAL-QAVTRALRYP 166 >2GJ9-A nrPDB Length = 172 Score = 70.1 bits (170), Expect = 1e-12, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 17/166 (10%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPK-VADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIE 219 V + G PNAGKS+ + A++ + V D TT + +D + D GL E Sbjct: 6 KVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDG-MPLHIIDTAGLRE 64 Query: 220 GAAEGAGLGI-RFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 + E +GI R + +E+ +L ++D D DP E I+ L A P Sbjct: 65 ASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLP------AKLPI 118 Query: 279 WLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDL 324 +V NK D+ + + + +SA +G GV L Sbjct: 119 TVVRNKADI--------TGETLGMSEVNGHALIRLSARTGEGVDVL 156 >5LAD-A nrPDB Length = 404 Score = 69.8 bits (169), Expect = 2e-12, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 15/164 (9%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKPK-VADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEG 220 + + G N GKS+F+ A+ V++Y TT P + + + D PGL + Sbjct: 12 IVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTTTDPVYKSMELYPVGPVTLVDTPGLDDV 71 Query: 221 AAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWL 280 G + + R + + D +P D + + E+E P + Sbjct: 72 GELGRLRVEKARRVFYRADCGILVTDSEPTPYED---DVVNLFKEME--------IPFVV 120 Query: 281 VFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDL 324 V NKID+L + E+ K + E+ +E K L+SA G D+ Sbjct: 121 VVNKIDVLGEK--AEELKGLYES-RYEAKVLLVSALQKKGFDDI 161 >4DCU-A nrPDB Length = 456 Score = 69.4 bits (168), Expect = 3e-12, Method: Composition-based stats. Identities = 42/192 (21%), Positives = 66/192 (34%), Gaps = 17/192 (8%) Query: 153 LLELMLLADVGMLGMPNAGKSTFIRAVSAAKPK-VADYPFTTLVPSLGVVRMDNEKSFVV 211 M V ++G PN GKST ++ + V D P T N F + Sbjct: 17 RGSHMGKPVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLN-YDFNL 75 Query: 212 ADIPGL-IEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYS 270 D G+ I A + + ++ V++ ++ + +G + E+ K Sbjct: 76 IDTGGIDIGDEPFLAQIRQQAEIAMDEADVIIFMV--NGREGVTAAD------EEVAKIL 127 Query: 271 QDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMT 330 KP L NK+D E +A + Y IS GLG+ DL V Sbjct: 128 YR-TKKPVVLAVNKLD-----NTEMRANIYDFYSLGFGEPYPISGTHGLGLGDLLDAVAE 181 Query: 331 FIIENPVVQAEE 342 P + E Sbjct: 182 HFKNIPETKYNE 193 Score = 60.5 bits (145), Expect = 1e-09, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 65/172 (37%), Gaps = 21/172 (12%) Query: 164 MLGMPNAGKSTFIRA-VSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEG-- 220 ++G PN GKS+ + A + + V++ TT N++ FV+ D G+ + Sbjct: 200 LIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTY-NQQEFVIVDTAGMRKKGK 258 Query: 221 --AAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAT-KP 277 +R LK ++R V+ ++D + II + K Sbjct: 259 VYETTEKYSVLRALKAIDRSEVVAVVLDGEE----------GIIEQDKRIAGYAHEAGKA 308 Query: 278 RWLVFNKIDLLDKVE--AEEKAKAIAEA--LGWEDKYYLISAASGLGVKDLC 325 +V NK D +DK E +E + I + +SA + + L Sbjct: 309 VVIVVNKWDAVDKDESTMKEFEENIRDHFQFLDYAPILFMSALTKKRIHTLM 360 >1WF3-A nrPDB Length = 301 Score = 67.1 bits (162), Expect = 1e-11, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 13/177 (7%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKP-KVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEG 220 V ++G PN GKST + + K ++ P TT G++ + + V D PGL + Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILT-EGRRQIVFVDTPGLHKP 68 Query: 221 AAE-GAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRW 279 G + + L ++ ++D+ P ++ + P Sbjct: 69 MDALGEFMDQEVYEALADVNAVVWVVDLRHP----PTPEDELVA---RALKPLVGKVPIL 121 Query: 280 LVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENP 336 LV NK+D EE KA E L E + ++SA V +L D++ + E P Sbjct: 122 LVGNKLDAAKYP--EEAMKAYHE-LLPEAEPRMLSALDERQVAELKADLLALMPEGP 175 >5X4B-A nrPDB Length = 162 Score = 64.4 bits (155), Expect = 9e-11, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 59/168 (35%), Gaps = 17/168 (10%) Query: 160 ADVGMLGMPNAGKSTFIRAVSAAKPK-VADYPFTTLVPSLGVVRMDNEKSFVVADIPGL- 217 V ++G PN GKST ++ + V D P T N F + D G+ Sbjct: 3 PVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLN-YDFNLIDTGGID 61 Query: 218 IEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKP 277 I A + + ++ V++ +++ E E+ K KP Sbjct: 62 IGDEPFLAQIRQQAEIAMDEADVIIFMVNGR--------EGVTAADEEVAKILYR-TKKP 112 Query: 278 RWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLC 325 L NK+D E +A + Y IS GLG+ DL Sbjct: 113 VVLAVNKLD-----NTEMRANIYDFYSLGFGEPYPISGTHGLGLGDLL 155 >3IEU-A nrPDB Length = 301 Score = 62.4 bits (150), Expect = 3e-10, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 57/162 (35%), Gaps = 12/162 (7%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGA 221 + ++G PN GKST + + K + T + + + + D PGL Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEE 70 Query: 222 AEGAG--LGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRW 279 + + +++ +++ GT + +++++L + P Sbjct: 71 KRAINRLMNKAASSSIGDVELVIFVVE-----GTRWTPDDEMVLNKLRE-----GKAPVI 120 Query: 280 LVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGV 321 L NK+D + + + ISA +GL V Sbjct: 121 LAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNV 162 >3PR1-A nrPDB Length = 195 Score = 61.7 bits (148), Expect = 6e-10, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 80/180 (44%), Gaps = 14/180 (7%) Query: 161 DVGMLGMPNAGKSTFIRAV-SAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIP--GL 217 +V +G N GKS+ + A+ + V+ P T + +V + D+P G Sbjct: 25 EVAFVGRSNVGKSSLLNALFNRKIAFVSKTPGKTRSINFYLVN----SKYYFVDLPGYGY 80 Query: 218 IEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKP 277 + + + L R ++ + R L ++ +DG P +++ +++ E + + L P Sbjct: 81 AKVSKKERMLWKRLVEDYFKNRWSLQMV-FLLVDGRIPPQDSDLMMVE---WMKSL-NIP 135 Query: 278 RWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLI--SAASGLGVKDLCWDVMTFIIEN 335 +V K+D + E +K + + +Y +I S+ +G G+ +L + T + EN Sbjct: 136 FTIVLTKMDKVKMSERAKKLEEHRKVFSKYGEYTIIPTSSVTGEGISELLDLISTLLKEN 195 >4BAS-A nrPDB Length = 199 Score = 54.4 bits (129), Expect = 9e-08, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 63/177 (35%), Gaps = 15/177 (8%) Query: 153 LLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVA 212 + + V M G+ N+GK+T I V A+ T+ ++ +F V Sbjct: 11 MGQSKTKLQVVMCGLDNSGKTTIINQVKPAQSSSKHIT-ATVGYNVETFE-KGRVAFTVF 68 Query: 213 DIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVE---NARIIISELEKY 269 D+ G A + GL + ++ ++ ++D V+ A + ++ + Sbjct: 69 DMGG----AKKFRGLWETYYDNI---DAVIFVVDSSDHLRLCVVKSEIQAMLKHEDIRRE 121 Query: 270 SQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISA---ASGLGVKD 323 P NK+D A E + + D ++I A G GV + Sbjct: 122 LPGGGRVPFLFFANKMDAAGAKTAAELVEILDLTTLMGDHPFVIFASNGLKGTGVHE 178 >5J8B-z nrPDB Length = 679 Score = 51.3 bits (121), Expect = 7e-07, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 76/242 (31%), Gaps = 37/242 (15%) Query: 136 RTPRQKTNGTPGDK-RELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYP---- 190 + R ++ +E+L L + + ++ + GKST + V+D Sbjct: 54 QAKRLAERKAEAERLKEILENLSRIRNFSIIAHVDHGKSTLADRILELTHAVSDREMREQ 113 Query: 191 -----------FTTLVPSLGVVRMD----NEKSFVVADIPGLIEGAAEGAGLGIRFLKHL 235 T+ S V E F + D PG ++ E + L Sbjct: 114 FLDSLELERERGITIKASAVRVTYRAKDGEEYVFHLIDTPGHVDFTYE-------VSRAL 166 Query: 236 ERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEE 295 +L ++D + + + + V NKIDL + E Sbjct: 167 AAVEGVLLVVDASQGVEAETLAKFYMALEHGHVIIP---------VINKIDLPNARPLEV 217 Query: 296 KAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDD 355 + D+ S +G GV+++ + + I P E + + ++D Sbjct: 218 ALEVEEVLGLPADEAIFASGKTGEGVEEIL-EAIVQRIPPPKGDPEAPLKALIFDSVYDA 276 Query: 356 YH 357 Y Sbjct: 277 YQ 278 >1SUL-A nrPDB Length = 195 Score = 51.3 bits (121), Expect = 8e-07, Method: Composition-based stats. Identities = 39/186 (20%), Positives = 80/186 (43%), Gaps = 24/186 (12%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAK--PKVADYPFTTLVPSLGVVRMDNEKSFVVADIPG 216 L ++ + G N GKS+FI ++ K + + P T + ++ ++E F D+PG Sbjct: 23 LPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYII--NDELHF--VDVPG 78 Query: 217 -----LIEGAAEGAGLGIR-FLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYS 270 + + E G I ++ E + ++ ++D+ P + + L+ Y Sbjct: 79 YGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHA----PSNDDVQMYEFLKYYG 134 Query: 271 QDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWE--DKYYLISAASGLGVKDLCWDV 328 P ++ K D + K + ++ AK + + L + D+ L S+ + G KD W Sbjct: 135 -----IPVIVIATKADKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKKG-KDEAWGA 188 Query: 329 MTFIIE 334 + +I Sbjct: 189 IKKMIN 194 >5DE3-A nrPDB Length = 169 Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 74/178 (41%), Gaps = 23/178 (12%) Query: 160 ADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLG---VVRMDNEKSFVVADIPG 216 A + +LG+ NAGK+T ++A+S TT+ P+ G + + + DI G Sbjct: 1 ARILVLGLDNAGKTTILKALSEEDI-------TTITPTQGFNIKSLSRDGFNLKIWDIGG 53 Query: 217 LIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATK 276 + + + ++ L+++ID D E+ + L+ + + Sbjct: 54 -------QKSIRPYWRNYFDQTDALIYVIDSA--DSKRLSESEFELTELLQ--EEKMTGV 102 Query: 277 PRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYL--ISAASGLGVKDLCWDVMTFI 332 P + NK DL+ + A+E A + + + + SA G G+K+ +M + Sbjct: 103 PLLVFANKQDLVGALAADEIASTLDLTSIRDRPWQIQACSAKQGTGLKEGMEWMMKQV 160 >2CXX-A nrPDB Length = 190 Score = 49.3 bits (116), Expect = 3e-06, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 66/198 (33%), Gaps = 37/198 (18%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI 218 +A + G N GKST I ++ K + P T K+ + D+PG Sbjct: 1 MATIIFAGRSNVGKSTLIYRLTGKKVRRGKRPGVTRKIIEI-----EWKNHKIIDMPGF- 54 Query: 219 EGAAEGAGLGIRFLKHLERCRVLLHLID--IDPIDGTDPVENARIIISELEKYSQDLA-- 274 G +G+ ++H I+ ID V + + ++++ + Sbjct: 55 -----GFMMGLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVDGKAAPEIIKRWEKRGEIP 109 Query: 275 ------------TKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDK-----YYLISAAS 317 P + NK+D + +E +AE + ISA Sbjct: 110 IDVEFYQFLRELDIPTIVAVNKLDKIK--NVQEVINFLAEKFEVPLSEIDKVFIPISAKF 167 Query: 318 GLGVKDL---CWDVMTFI 332 G ++ L ++V+ Sbjct: 168 GDNIERLKNRIFEVIRER 185 >3H2Y-A nrPDB Length = 368 Score = 49.3 bits (116), Expect = 3e-06, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 11/89 (12%) Query: 160 ADVGMLGMPNAGKSTFIRAV-------SAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVA 212 DV ++G N GKSTFI + + + +P TTL ++ + ++ + Sbjct: 161 KDVYVVGCTNVGKSTFINRMIKEFSDETENVITTSHFPGTTLD----LIDIPLDEESSLY 216 Query: 213 DIPGLIEGAAEGAGLGIRFLKHLERCRVL 241 D PG+I +G + LK + + + Sbjct: 217 DTPGIINHHQMAHYVGKQSLKLITPTKEI 245 Score = 30.5 bits (67), Expect = 1.3, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 5/55 (9%) Query: 275 TKPRWLVFNKIDLLDKVEAEEKAK-----AIAEALGWEDKYYLISAASGLGVKDL 324 LV NK DL+ K +K K + + + +LISAA G G+ +L Sbjct: 96 NNKVLLVGNKADLIPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAEL 150 >5UCV-A nrPDB Length = 217 Score = 49.0 bits (115), Expect = 4e-06, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 62/176 (35%), Gaps = 26/176 (14%) Query: 161 DVGMLGMPNAGKSTFIRAVSA--AKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGL- 217 ++ +G NAGKS+ I ++ V+ P T + + N + D+PG Sbjct: 33 EIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRTQHINF--FELQNGNF--MVDLPGYG 88 Query: 218 ---IEGA--AEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQD 272 + A A L +L+H ++ L+ ++D + + Sbjct: 89 YAQVPEAVRAHWVNLLGDYLRHRKQLIGLVLIMDARHPLKELDIRMLDFFHT-------- 140 Query: 273 LATKPRWLVFNKIDLLDKVEAEEKAKAIAEALG-----WEDKYYLISAASGLGVKD 323 +P ++ +K D L K E + + + L L S+ G+ + Sbjct: 141 -TGRPVHILLSKADKLSKNEQIKTLSQVKKLLKPYSDRQNISVQLFSSLKKQGIDE 195 >3CNO-A nrPDB Length = 262 Score = 49.0 bits (115), Expect = 4e-06, Method: Composition-based stats. Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 8/90 (8%) Query: 147 GDKRELLLE---LMLLADVGMLGMPNAGKSTFIRAVSAAKP-KVADYPFTTLVPSLGVVR 202 G+ R++LL+ LA V ++G+PN GKST I + + V P T G+ Sbjct: 84 GEPRKVLLKKLSFDRLARVLIVGVPNTGKSTIINKLKGKRASSVGAQPGITK----GIQW 139 Query: 203 MDNEKSFVVADIPGLIEGAAEGAGLGIRFL 232 E + D PG++ L + L Sbjct: 140 FSLENGVKILDTPGILYKNIFSEDLAAKLL 169 >4AC9-A nrPDB Length = 482 Score = 48.6 bits (114), Expect = 5e-06, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 66/194 (34%), Gaps = 29/194 (14%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKPKVA-------DYPFTTLVPSLGVVRMDNEKSFVVADI 214 +G+ G + GK+T + ++ A T+ +++N + + D Sbjct: 22 LGIFGHIDHGKTTLSKVLTEIASTSAHDKLPESQKRGITIDIGFSAFKLENYR-ITLVDA 80 Query: 215 PGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLA 274 PG A L + + + L ++D T E+ I+ D Sbjct: 81 PG-------HADLIRAVVSAADIIDLALIVVDAKEGPKTQTGEHMLIL---------DHF 124 Query: 275 TKPRWLVFNKIDLLDKVEAEEKAKAIAEAL-----GWEDKYYLISAASGLGVKDLCWDVM 329 P +V K D E + + L ISA +G GV +L ++ Sbjct: 125 NIPIIVVITKSDNAGTEEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDELKNLII 184 Query: 330 TFIIENPVVQAEEA 343 T + +++ E+ Sbjct: 185 TTLNNAEIIRNTES 198 >5LZD-z nrPDB Length = 614 Score = 48.6 bits (114), Expect = 5e-06, Method: Composition-based stats. Identities = 27/190 (14%), Positives = 56/190 (29%), Gaps = 22/190 (11%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYP---FTTLVPSLGVVRMDNEKSFVVADIPGLI 218 + G + GK+T ++A++ T+ + + +PG I Sbjct: 3 IATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAYWPQPDGR------VPGFI 56 Query: 219 EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 + L L + H + + D + + Q Sbjct: 57 DVPGHEKFLSNM----LAGVGGIDHALLVVACDDGVMAQTREHL-----AILQLTGNPML 107 Query: 279 WLVFNKIDLLDKVEAEEKAKAIAEALGW----EDKYYLISAASGLGVKDLCWDVMTFIIE 334 + K D +D+ +E + + E L E K ++ +A G G+ L ++ Sbjct: 108 TVALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGMDALREHLLQLPER 167 Query: 335 NPVVQAEEAK 344 Q Sbjct: 168 EHASQHSFRL 177 >6G12-A nrPDB Length = 301 Score = 48.6 bits (114), Expect = 5e-06, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 5/86 (5%) Query: 164 MLGMPNAGKSTFIRAVSA-AKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAA 222 ++G+PN GKST I ++ + + + P T V + + D PG++ Sbjct: 132 IVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKV----GNALQLLDTPGILWPKF 187 Query: 223 EGAGLGIRFLKHLERCRVLLHLIDID 248 E +G + ++HL ++ Sbjct: 188 EDEEVGKKLSLTGAIKDSIVHLDEVA 213 >4ZU9-A nrPDB Length = 582 Score = 48.2 bits (113), Expect = 7e-06, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 58/169 (34%), Gaps = 22/169 (13%) Query: 163 GMLGMPNAGKSTFIRAVSAAKPKVADYP---FTTLVPSLGVVRMDNEK-SFVVADIPGLI 218 G + GK+T I+ ++ ++ + + + D+PG Sbjct: 7 ATAGHVDHGKTTLIKTLTGIDTDRLPEEKKRGLSIDIGFAYIDFPDINTRLEIIDVPG-- 64 Query: 219 EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 + + L+ ++D + +E+ R+ + K Sbjct: 65 -----HERFIKNAIAGICSASGLILVVDPNEGIMPQTIEHLRVA--------KSFGIKHG 111 Query: 279 WLVFNKIDLLDKVEA---EEKAKAIAEALGWEDKYYLISAASGLGVKDL 324 V K+D +D+ A EE+ A E + +SA +G G++DL Sbjct: 112 IAVLTKMDKVDEELAHIAEEELIAFLEKEEMNMEIVKVSAVTGQGIEDL 160 >3EC1-A nrPDB Length = 369 Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 34/105 (32%), Gaps = 28/105 (26%) Query: 161 DVGMLGMPNAGKSTFIRAVS-----AAKPKVADY-PFTTLVPSLGVVRMDNEKSFVVADI 214 DV ++G N GKSTFI + Y P TTL ++ + E + D Sbjct: 164 DVYVVGCTNVGKSTFINRIIEEATGKGNVITTSYFPGTTLD----MIEIPLESGATLYDT 219 Query: 215 PGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENA 259 PG+I + H +D + P Sbjct: 220 PGIINHHQ------------------MAHFVDARDLKIITPKREI 246 >3IZY-P nrPDB Length = 537 Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 21/170 (12%) Query: 160 ADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIE 219 V ++G + GK+T + + + + T +V + + + D PG Sbjct: 5 PVVTIMGHVDHGKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLPSGEKITFLDTPG-HA 63 Query: 220 GAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRW 279 + G + +++ ++ D VE+ + A P Sbjct: 64 AFSAMRARGTQV------TDIVILVVAADDGVMKQTVESIQHAKD---------AHVPIV 108 Query: 280 LVFNKIDLLDKVEAEEKAKAIA-----EALGWEDKYYLISAASGLGVKDL 324 L NK D + + K + +A E G + + +SA +G + L Sbjct: 109 LAINKCDKAEADPEKVKKELLAYDVVCEDYGGDVQAVHVSALTGENMMAL 158 >1PUJ-A nrPDB Length = 282 Score = 46.7 bits (109), Expect = 2e-05, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 5/86 (5%) Query: 164 MLGMPNAGKSTFIRAVSAAK-PKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAA 222 ++G+PN GKST I ++ K D P T V K + D PG++ Sbjct: 125 IIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKV----GKELELLDTPGILWPKF 180 Query: 223 EGAGLGIRFLKHLERCRVLLHLIDID 248 E +G+R +++L D+ Sbjct: 181 EDELVGLRLAVTGAIKDSIINLQDVA 206 >6GB2-BC nrPDB Length = 657 Score = 45.9 bits (107), Expect = 3e-05, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 59/170 (34%), Gaps = 21/170 (12%) Query: 160 ADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIE 219 V ++G + GK+T + + + T +V + + + D PG Sbjct: 111 PVVTIMGHVDHGKTTLLDKFRKTQVAAVETGGITQHIGAFLVSLPSGEKITFLDTPG--- 167 Query: 220 GAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRW 279 AA A + + +++ ++ D VE+ + A P Sbjct: 168 HAAFSAMRA----RGAQVTDIVVLVVAADDGVMKQTVESIQHAKD---------AQVPII 214 Query: 280 LVFNKIDLLDKVEAEEKAKAIA-----EALGWEDKYYLISAASGLGVKDL 324 L NK D + + K + +A E G + + +SA +G + L Sbjct: 215 LAVNKCDKAEADPEKVKKELLAYDVVCEDYGGDVQAVPVSALTGDNLMAL 264 >1PUI-A nrPDB Length = 210 Score = 45.9 bits (107), Expect = 3e-05, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 70/192 (36%), Gaps = 22/192 (11%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKV--ADYPFTTLVPSLGVVRMDNEKSFVVADIP--G 216 +V G NAGKS+ + ++ K + P T + +L + + K + D+P G Sbjct: 28 EVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINL--FEVADGKR--LVDLPGYG 83 Query: 217 LIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLA-- 274 E E R L +L + G + + R + +L++ + A Sbjct: 84 YAEVPEEMKRKWQRALGE--------YLEKRQSLQGLVVLMDIRHPLKDLDQQMIEWAVD 135 Query: 275 -TKPRWLVFNKIDLLDKVEAEEKAKAIAEALGW---EDKYYLISAASGLGVKDLCWDVMT 330 ++ K D L + + + EA+ + + S+ GV L + T Sbjct: 136 SNIAVLVLLTKADKLASGARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDT 195 Query: 331 FIIENPVVQAEE 342 + E V+ + Sbjct: 196 WFSEMQPVEETQ 207 >4DHE-A nrPDB Length = 223 Score = 45.5 bits (106), Expect = 4e-05, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 66/179 (36%), Gaps = 19/179 (10%) Query: 158 LLADVGMLGMPNAGKSTFIRAVSAAK--PKVADYPFTTLVPSLGVVRMDNEKSFVVADIP 215 + ++ G NAGKST I + K + P T + V E + D+P Sbjct: 28 VQPEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHINYFSVGPAAEPVAHLVDLP 87 Query: 216 GLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDL-- 273 G G AE G + L +L + G + +AR ++EL++ + Sbjct: 88 GY--GYAEVPGAAKAHWEQLLSS----YLQTRPQLCGMILMMDARRPLTELDRRMIEWFA 141 Query: 274 -ATKPRWLVFNKIDLLDKVEAEEKAKAIAEAL--------GWEDKYYLISAASGLGVKD 323 KP + K D L + E+ +A ++L + L SA G+ D Sbjct: 142 PTGKPIHSLLTKCDKLTRQESINALRATQKSLDAYRDAGYAGKLTVQLFSALKRTGLDD 200 >4KJZ-A nrPDB Length = 473 Score = 45.5 bits (106), Expect = 4e-05, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 59/172 (34%), Gaps = 24/172 (13%) Query: 160 ADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVV-ADIPGLI 218 V ++G + GK+T + + ++ + T +G + + VV D PG Sbjct: 73 PVVVIMGHVDHGKTTLLDYLRKSRIAEKEAGGIT--QHVGAFEVKTPQGTVVFIDTPG-- 128 Query: 219 EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 E + + V++ D DG P +E A Sbjct: 129 ---HEAFTTIRQRGAKVADIAVIVIAAD----DGIMP-------QTEEAIAHAKAAGAKL 174 Query: 279 WLVFNKIDLLDKVEAEEKAK-----AIAEALGWEDKYYLISAASGLGVKDLC 325 NKIDL + K + + E G + ISA +G GV+DL Sbjct: 175 IFAINKIDLPQADPEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLL 226 >5IMR-C nrPDB Length = 610 Score = 45.5 bits (106), Expect = 4e-05, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 71/225 (31%), Gaps = 36/225 (16%) Query: 152 LLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYP---------------FTTLVP 196 + ++L + + ++ + GKST + V+D T+ Sbjct: 2 VRMDLSRIRNFSIIAHVDHGKSTLADRILELTHAVSDREMREQFLDSLELERERGITIKA 61 Query: 197 SLGVVRMD----NEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDG 252 S V E F + D PG ++ E + L +L ++D Sbjct: 62 SAVRVTYRAKDGEEYVFHLIDTPGHVDFTYE-------VSRALAAVEGVLLVVDASQGVE 114 Query: 253 TDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYL 312 + + + + V NKIDL + E + D+ Sbjct: 115 AETLAKFYMALEHGHVIIP---------VINKIDLPNARPLEVALEVEEVLGLPADEAIF 165 Query: 313 ISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYH 357 S +G GV+++ + + I P E + + ++D Y Sbjct: 166 ASGKTGEGVEEIL-EAIVQRIPPPKGDPEAPLKALIFDSVYDAYQ 209 >3J4J-A nrPDB Length = 569 Score = 45.1 bits (105), Expect = 5e-05, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 59/172 (34%), Gaps = 24/172 (13%) Query: 160 ADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVV-ADIPGLI 218 V ++G + GK+T + + ++ + T +G + + VV D PG Sbjct: 74 PVVVIMGHVDHGKTTLLDYLRKSRIAEKEAGGIT--QHVGAFEVKTPQGTVVFIDTPG-- 129 Query: 219 EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 E + + V++ D DG P +E A Sbjct: 130 ---HEAFTTIRQRGAKVADIAVIVIAAD----DGIMP-------QTEEAIAHAKAAGAKL 175 Query: 279 WLVFNKIDLLDKVEAEEKAK-----AIAEALGWEDKYYLISAASGLGVKDLC 325 NKIDL + K + + E G + ISA +G GV+DL Sbjct: 176 IFAINKIDLPQADPEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLL 227 >4B44-A nrPDB Length = 363 Score = 45.1 bits (105), Expect = 6e-05, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 59/172 (34%), Gaps = 24/172 (13%) Query: 160 ADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVV-ADIPGLI 218 V ++G + GK+T + + ++ + T +G + + VV D PG Sbjct: 74 PVVVIMGHVDHGKTTLLDYLRKSRIAEKEAGGIT--QHVGAFEVKTPQGTVVFIDTPG-- 129 Query: 219 EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 E + + V++ D DG P +E A Sbjct: 130 ---HEAFTTIRQRGAKVADIAVIVIAAD----DGIMP-------QTEEAIAHAKAAGAKL 175 Query: 279 WLVFNKIDLLDKVEAEEKAK-----AIAEALGWEDKYYLISAASGLGVKDLC 325 NKIDL + K + + E G + ISA +G GV+DL Sbjct: 176 IFAINKIDLPQADPEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLL 227 >6N8J-m nrPDB Length = 486 Score = 45.1 bits (105), Expect = 6e-05, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKP-KVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIE 219 VG +G PN GKS+ I + K +VA P T V + K + D PG++ Sbjct: 317 SVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETKVWQYITL----MKRIFLIDCPGIVP 372 Query: 220 GAAEGAGLGIRFLKHLE 236 +++ + I F + Sbjct: 373 PSSKDSEEDILFRGVVR 389 Score = 28.9 bits (63), Expect = 3.5, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 41/117 (35%), Gaps = 14/117 (11%) Query: 229 IRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLL 288 K ++ V++H++D DP+ + E ++ K V NK DL+ Sbjct: 213 NELYKVIDSSDVVIHVLDA-----RDPLGTRCKSVEE--YMKKETPHKHLIYVLNKCDLV 265 Query: 289 DKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQ 345 A K +++ + I+ + G G + ++ + KQ Sbjct: 266 PTWVAAAWVKHLSKERPTLAFHASITNSFGKG-------SLIQLLRQFSQLHTDRKQ 315 >2LKD-A nrPDB Length = 178 Score = 44.7 bits (104), Expect = 7e-05, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 59/171 (34%), Gaps = 22/171 (12%) Query: 160 ADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIE 219 V ++G + GK+T + A+ +K + T V ++++K D PG E Sbjct: 9 PVVTIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQHIGAYQVTVNDKK-ITFLDTPG-HE 66 Query: 220 GAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRW 279 G + +++ ++ D VE A P Sbjct: 67 AFTTMRARGAQV------TDIVILVVAADDGVMPQTVEAINH---------AKAANVPII 111 Query: 280 LVFNKIDLLDK-----VEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLC 325 + NK+D + ++ + + E G + + +SA + G+ L Sbjct: 112 VAINKMDKPEANPDRVMQELMEYNLVPEEWGGDTIFCKLSAKTKEGLDHLL 162 >3BH6-A nrPDB Length = 164 Score = 43.6 bits (101), Expect = 1e-04, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 63/166 (37%), Gaps = 21/166 (12%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKP-KVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEG 220 + +LG+ NAGK+T ++ +++ + + V DI GL + Sbjct: 7 ILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQ-----GFKLNVWDIGGLRKI 61 Query: 221 AAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWL 280 + + E +L+++ID + + + L+ P + Sbjct: 62 RP-------YWRSYFENTDILIYVIDSADRKRFEETGQELTEL----LEEEKLSCVPVLI 110 Query: 281 VFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLI---SAASGLGVKD 323 NK DLL A E A+ + + + + I SA +G GV+D Sbjct: 111 FANKQDLLTAAPASEIAEGLNLHTIRD-RVWQIQSCSALTGEGVQD 155 >4ZI3-A nrPDB Length = 190 Score = 42.4 bits (98), Expect = 3e-04, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 67/180 (37%), Gaps = 25/180 (13%) Query: 152 LLLELMLLAD----VGMLGMPNAGKSTFIRAVSAAKP-KVADYPFTTLVPSLGVVRMDNE 206 +L +L D + +LG+ NAGK+T ++ +++ + + Sbjct: 6 ILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQ-----G 60 Query: 207 KSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISEL 266 V DI G + + + E +L+++ID + + Sbjct: 61 FKLNVWDIGG-------QRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTEL--- 110 Query: 267 EKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLI---SAASGLGVKD 323 + L+ P + NK DLL A E A+ + + + + I SA +G GV+D Sbjct: 111 -LEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRD-RVWQIQSCSALTGEGVQD 168 >6IYB-A nrPDB Length = 199 Score = 42.4 bits (98), Expect = 4e-04, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 73/200 (36%), Gaps = 15/200 (7%) Query: 155 ELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRM---DNEKSFVV 211 +L V +LG GK++ + K ++ T+ + D + + Sbjct: 9 RKKVLLKVIILGDSGVGKTSLMNQY--VNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 66 Query: 212 ADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQ 271 D GL E G+ F + + C ++ + + D + +I + + Sbjct: 67 WDTAGL-----ERFQSGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI----QASPR 117 Query: 272 DLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTF 331 D P ++ NKIDL ++ A ++A+A + Y+ SA + V+ + Sbjct: 118 DPENFPFVVLGNKIDLENRQVATKRAQAWCYS-KNNIPYFETSAKEAINVEQAFQTIARN 176 Query: 332 IIENPVVQAEEAKQPEKVEF 351 ++ + PE ++ Sbjct: 177 ALKQETEVELYNEFPEPIKL 196 >4M9Q-A nrPDB Length = 227 Score = 42.0 bits (97), Expect = 4e-04, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 19/142 (13%) Query: 161 DVGMLGMPNAGKSTFIRAVSA--AKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI 218 + +LG+ NAGK+T + ++ + + F + + G + V D+ G Sbjct: 6 TIALLGLDNAGKTTLLNSIQGEVDRDTTPTFGFNSTTLNEG------KYKIEVFDLGG-- 57 Query: 219 EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 G+ ++L + +++++D + E+ + LE +Q + KP Sbjct: 58 --GKNIRGVWKKYLAEVH---AIVYVVDAADPGRFE--ESKMTMAEVLE--NQFMRDKPI 108 Query: 279 WLVFNKIDLLDKVEAEEKAKAI 300 + NK DL A E K + Sbjct: 109 CIFANKQDLPTAAPAAEVVKGL 130 >5DI3-B nrPDB Length = 263 Score = 42.0 bits (97), Expect = 5e-04, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 19/142 (13%) Query: 161 DVGMLGMPNAGKSTFIRAVSA--AKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI 218 + +LG+ NAGK+T + ++ + + F + + G + V D+ G Sbjct: 6 TIALLGLDNAGKTTLLNSIQGEVDRDTTPTFGFNSTTLNEG------KYKIEVFDLGG-- 57 Query: 219 EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 G+ ++L + +++++D + E+ + LE +Q + KP Sbjct: 58 --GKNIRGVWKKYLAEVH---AIVYVVDAADPGRFE--ESKMTMAEVLE--NQFMRDKPI 108 Query: 279 WLVFNKIDLLDKVEAEEKAKAI 300 + NK DL A E K + Sbjct: 109 CIFANKQDLPTAAPAAEVVKGL 130 >3NXS-A nrPDB Length = 329 Score = 41.3 bits (95), Expect = 7e-04, Method: Composition-based stats. Identities = 49/253 (19%), Positives = 93/253 (36%), Gaps = 35/253 (13%) Query: 148 DKRELLLELM----LLADVGMLGMPNAGKSTFIRAVSAAKPKVAD-YPFTTLVPSL---- 198 ++LLL+LM VG+ G+P GKST I A+ + + PS Sbjct: 42 QAQQLLLDLMPEAGSAMHVGITGVPGVGKSTTIEALGMHLIEAGHRVAVLAVDPSSTRTG 101 Query: 199 GVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLL-------HLIDIDPID 251 G + D + +A P + +G K VLL L++ + Sbjct: 102 GSILGDKTRMARLAVHPDAYIRPSPTSGTLGGVAKATRETIVLLEAAGYDVILVETVGVG 161 Query: 252 GTDP----VENARIII------SELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIA 301 ++ + + + + +L+ + + +V NK D VEA+ A+ ++ Sbjct: 162 QSEVTVAGMVDTFVFLTLARTGDQLQGIKKGVLELADVIVVNKADGEHAVEAKAAARELS 221 Query: 302 EAL--------GWEDKYYLISAASGLGVKDLCWDVMTFIIE-NPVVQAEEAKQPEKVEFM 352 A+ W +SA G G+ +L V+ + E ++ ++VE+ Sbjct: 222 GAIRLIYPRESLWRPPVLTMSAVEGTGLPELWETVLRHREVLEEAGEFEARRRTQQVEWT 281 Query: 353 WDDYHRQQLEEIA 365 W L+ + Sbjct: 282 WSMVRDAVLDRVM 294 >1F6B-A nrPDB Length = 198 Score = 41.3 bits (95), Expect = 8e-04, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 66/184 (35%), Gaps = 29/184 (15%) Query: 151 ELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFV 210 + L + LG+ NAGK+T + + P TL P+ + + +F Sbjct: 17 QFLGLYKKTGKLVFLGLDNAGKTTLLHML-KDDRLGQHVP--TLHPTSEELTIAG-MTFT 72 Query: 211 VADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYS 270 D+ G I + + +L + ++ L+D + +E+ + S + Sbjct: 73 TFDLGGHI----QARRVWKNYLPAI---NGIVFLVDCADHERL--LESKEELDSLMT--D 121 Query: 271 QDLATKPRWLVFNKIDLLDKVEAEEKAK--------------AIAEALGWEDKYYLISAA 316 + +A P ++ NKID + + E + ++ E + ++ S Sbjct: 122 ETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVL 181 Query: 317 SGLG 320 G Sbjct: 182 KRQG 185 >6N8N-W nrPDB Length = 640 Score = 41.3 bits (95), Expect = 8e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Query: 162 VGMLGMPNAGKSTFIRAVSAA-KPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI 218 +G++G PN GKS+ I ++ A K V+ P T +++ + S ++ D PGL+ Sbjct: 339 IGLVGYPNVGKSSTINSLVGAKKVSVSSTPGKT--KHFQTIKLSD--SVMLCDCPGLV 392 >5T62-W nrPDB Length = 651 Score = 41.3 bits (95), Expect = 8e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 5/58 (8%) Query: 162 VGMLGMPNAGKSTFIRAVSAA-KPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI 218 +G++G PN GKS+ I ++ A K V+ P T +++ + S ++ D PGL+ Sbjct: 339 IGLVGYPNVGKSSTINSLVGAKKVSVSSTPGKT--KHFQTIKLSD--SVMLCDCPGLV 392 >6FT6-s nrPDB Length = 520 Score = 41.3 bits (95), Expect = 8e-04, Method: Composition-based stats. Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 12/97 (12%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAK------PKVADYPFTTLVPSLGVVRMDNEKSFVVADI 214 VG++G PN GKS+ I A+ A + V + T SL +++DN+ + D Sbjct: 282 VVGVIGYPNVGKSSVINALLARRGGQSKACPVGNEAGVT--TSLREIKIDNK--LKILDS 337 Query: 215 PGLIEGAAEGAGLGIRFLKHLERCRVL--LHLIDIDP 249 PG+ + + L L H++D P Sbjct: 338 PGICFPSENKKRSKVEHEAELALLNALPAKHIVDPYP 374 Score = 35.5 bits (80), Expect = 0.039, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 53/162 (32%), Gaps = 16/162 (9%) Query: 175 FIRAVSAAKPKVADYPFT------TLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLG 228 V +A+ A+Y T L V+ + F D+ G E Sbjct: 109 LAALVESAQQAAAEYEGTPSNDADVRDDELDVIDYN--IDFYGEDVEGESELEKSRKAYD 166 Query: 229 IRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLL 288 F ++ V+L+++D + T + ++ + L+ + L L+ NK+DL+ Sbjct: 167 KIFKSVIDASDVILYVLDARDPEST---RSRKVEEAVLQSQGKRL-----ILILNKVDLI 218 Query: 289 DKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMT 330 E+ + + A +G T Sbjct: 219 PPHVLEQWLNYLKSSFPTIPLRASSGAVNGTSFNRKLSQTTT 260 >2QPT-A nrPDB Length = 550 Score = 40.9 bits (94), Expect = 0.001, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 12/104 (11%) Query: 207 KSFVVADIPGLIEGAAEGAGLGIRFLKHLE----RCRVLLHLIDIDPIDGTDPVENARII 262 +S + D PG++ GA + G F L R +++ L D ++ +D A Sbjct: 154 ESISIIDTPGILSGAKQRVSRGYDFPAVLRWFAERVDLIILLFDAHKLEISDEFSEA--- 210 Query: 263 ISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGW 306 I L + + +V NK D+++ + A+ ALG Sbjct: 211 IGALRGHEDKIR-----VVLNKADMVETQQLMRVYGALMWALGK 249 >3TK1-A nrPDB Length = 330 Score = 40.9 bits (94), Expect = 0.001, Method: Composition-based stats. Identities = 55/251 (21%), Positives = 93/251 (37%), Gaps = 35/251 (13%) Query: 150 RELLLELMLLA----DVGMLGMPNAGKSTFIRAVSAAKPKVAD-YPFTTLVPSL----GV 200 +ELLLELM A VG+ G+P GKST I A+ + + PS G Sbjct: 43 QELLLELMPDAGRAMHVGITGVPGVGKSTSIEALGMHLIEQGHRVAVLAVDPSSVRSGGS 102 Query: 201 VRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHL--IDI----------D 248 + D + +A P + +G K VLL D+ Sbjct: 103 ILGDKTRMARLAVHPDAYVRPSPSSGTLGGVAKATRETIVLLEAAGFDVVLVETVGVGQS 162 Query: 249 PIDGTDPVENARIII-----SELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEA 303 + D V+ + +L+ + + +V NK D VEA + A+ +A A Sbjct: 163 EVTVADMVDTFVFLTLARTGDQLQGIKKGVLELADIVVVNKADGEHAVEARKAARELAGA 222 Query: 304 L--------GWEDKYYLISAASGLGVKDLCWDVMTFI-IENPVVQAEEAKQPEKVEFMWD 354 + W +SA G GV +L V+ + + E+ ++ ++V +MW Sbjct: 223 MRLIYPRETLWRPPVLTMSALEGTGVAELWETVLKHRQVLIDAGEFEKRRRDQEVNWMWT 282 Query: 355 DYHRQQLEEIA 365 ++ + Sbjct: 283 MVRDAVIDRVM 293 >4ARZ-A nrPDB Length = 310 Score = 40.5 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 65/169 (38%), Gaps = 16/169 (9%) Query: 164 MLGMPNAGKSTFIRAV-SAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAA 222 ++G +GKS+ + S T+ +R + + D G Sbjct: 11 LMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGG------ 64 Query: 223 EGAGLGIRFLK---HL-ERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 + + F K H+ + +VL+H+ D+ + T+ +++ I L++ + Sbjct: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDV---ESTEVLKDIEIFAKALKQLRKYSPDAKI 121 Query: 279 WLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWD 327 +++ +K+DL+ + EE + + + L + +G WD Sbjct: 122 FVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNL--IGFPTSIWD 168 >4DJT-A nrPDB Length = 218 Score = 40.5 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 80/225 (35%), Gaps = 37/225 (16%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEK---SFVVADIPGL 217 + ++G GK+T+I V + + +Y T + V +D++ F V D G Sbjct: 13 KICLIGDGGVGKTTYINRVLDGRFE-KNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAG- 70 Query: 218 IEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKP 277 + ++ + ++ +L + +N + E + P Sbjct: 71 -----QEKKAVLKDVYYIGASGAILFF----DVTSRITCQNLARWVKEFQAVVG--NEAP 119 Query: 278 RWLVFNKIDLLDKVEAEEKAKAIAEAL-GWEDKYYLISAASG--------------LGVK 322 + NKID+ K + K + E L G +Y+ ISA + G Sbjct: 120 IVVCANKIDI--KNRQKISKKLVMEVLKGKNYEYFEISAKTAHNFGLPFLHLARIFTGRP 177 Query: 323 DLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEE 367 DL + + V + PE+ +++ DY Q + EE Sbjct: 178 DLIFVSNVNLEPTEV--NYDYHSPEESKYI--DYMEQASKMAPEE 218 >2H16-A nrPDB Length = 183 Score = 40.5 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 71/176 (40%), Gaps = 21/176 (11%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEG 220 V ++G+ NAGK+T + S + T+ ++ + ++N + F++ DI G Sbjct: 24 KVIIVGLDNAGKTTILYQFSMNEVVHTS---PTIGSNVEEIVINNTR-FLMWDIGG---- 75 Query: 221 AAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYS--QDLATKPR 278 L + + ++ ++D E + EL K +DL Sbjct: 76 ---QESLRSSWNTYYTNTEFVIVVVDSTDR------ERISVTREELYKMLAHEDLRKAGL 126 Query: 279 WLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLIS--AASGLGVKDLCWDVMTFI 332 + NK D+ + + E ++ + + ++++ + A +G G+ +M+ + Sbjct: 127 LIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 182 >5OWV-A nrPDB Length = 732 Score = 40.1 bits (92), Expect = 0.002, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 35/101 (34%), Gaps = 10/101 (9%) Query: 206 EKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISE 265 + + + D PGL + + + +L L+HL++ + ++ Sbjct: 291 KNNISIVDTPGLDDVVVQREIVTNEYL---RESDFLIHLMNASQ--SLTQKDADFLVHCL 345 Query: 266 LEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGW 306 L +V K DLL K + EE E+L Sbjct: 346 LNSRLSKF-----LIVLTKADLLSKKDLEEVIVYTKESLKS 381 Score = 35.9 bits (81), Expect = 0.035, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 60/159 (37%), Gaps = 19/159 (11%) Query: 162 VGMLGMPNAGKSTFIRAVSAAK-PKVADYPFT---TL----VPSLGVVRMDNEKSFVVAD 213 + + G+ NAGKS+ + A+ V++ P T T+ + ++K + Sbjct: 165 IAITGVMNAGKSSLLNALLKEDFLGVSNIPETANLTVLSYGKSEEAKIYFWDKKEWQ--- 221 Query: 214 IPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPI---DGTDPVENARIIISELEKYS 270 ++E + A L F+ L++ + I P+ ++N +++ Sbjct: 222 --NILESSHFNADL-KEFIDKLDKSVNIEDFIKDKPLIQNIALCELKNFSSAKNKISALI 278 Query: 271 QDLATKPRW-LVFNKIDLLDKVEAEEKAKAIAEALGWED 308 + + K + N I ++D ++ E + E Sbjct: 279 KKIEIKSHLEFLKNNISIVDTPGLDDVVVQ-REIVTNEY 316 >4V8Y-CP nrPDB Length = 339 Score = 40.1 bits (92), Expect = 0.002, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 64/213 (30%), Gaps = 68/213 (31%) Query: 164 MLGMPNAGKSTFIRAVSAAKPKVADYPFTT---------LVPSLGVVRMDNEKSFVVADI 214 +LG + GK+ + + + + T + ++ E D+ Sbjct: 10 ILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTFDV 69 Query: 215 PGL--IEGAAEGAGLGIRFLKHLER-----CRVLLHLIDIDPIDGTDPVENARIIISELE 267 PGL I+ G +L C + + +IDI +E+ +++ Sbjct: 70 PGLLVIDTP------GHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRDR-- 121 Query: 268 KYSQDLATKPRWLVFNKIDLL------------------------------DKVEAEEKA 297 P + NKID L K++ E Sbjct: 122 -------KAPFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAE 174 Query: 298 KAIAEALGWEDK-------YYLISAASGLGVKD 323 + + L +++K SA +G GV D Sbjct: 175 QGLNSELYFQNKNMSKYVSIVPTSAVTGEGVPD 207 >4NCF-A nrPDB Length = 457 Score = 40.1 bits (92), Expect = 0.002, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 64/213 (30%), Gaps = 68/213 (31%) Query: 164 MLGMPNAGKSTFIRAVSAAKPKVADYPFTT---------LVPSLGVVRMDNEKSFVVADI 214 +LG + GK+ + + + + T + ++ E D+ Sbjct: 15 ILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTFDV 74 Query: 215 PGL--IEGAAEGAGLGIRFLKHLER-----CRVLLHLIDIDPIDGTDPVENARIIISELE 267 PGL I+ G +L C + + +IDI +E+ +++ Sbjct: 75 PGLLVIDTP------GHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRDR-- 126 Query: 268 KYSQDLATKPRWLVFNKIDLL------------------------------DKVEAEEKA 297 P + NKID L K++ E Sbjct: 127 -------KAPFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAE 179 Query: 298 KAIAEALGWEDK-------YYLISAASGLGVKD 323 + + L +++K SA +G GV D Sbjct: 180 QGLNSELYFQNKNMSKYVSIVPTSAVTGEGVPD 212 >1ZBD-A nrPDB Length = 203 Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 73/188 (38%), Gaps = 17/188 (9%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEK-SFVVADIPGLIE 219 + ++G + GK++F+ + A + + + ++++ + D GL Sbjct: 10 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGL-- 67 Query: 220 GAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRW 279 + + + DI + + V++ + + Sbjct: 68 -----ERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWST-----QIKTYSWDNAQVL 117 Query: 280 LVFNKIDLL-DKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVV 338 LV NK D+ ++V + E+ + +A+ LG+E ++ SA + VK ++ + +I + Sbjct: 118 LVGNKCDMEDERVVSSERGRQLADHLGFE--FFEASAKDNINVKQ-TFERLVDVICEKMS 174 Query: 339 QAEEAKQP 346 ++ + P Sbjct: 175 ESLDTADP 182 >2YWH-A nrPDB Length = 600 Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 18/129 (13%) Query: 205 NEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIIS 264 N + D PG ++ + E + L C L LID A+ + + Sbjct: 71 NTYKLHLIDTPGHVDFSYE-------VSRALAACEGALLLIDASQGI------EAQTVAN 117 Query: 265 ELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALG-WEDKYYLISAASGLGVKD 323 + QDL P V NKID L + + K I E LG ++ L SA G+G+++ Sbjct: 118 FWKAVEQDLVIIP---VINKID-LPSADVDRVKKQIEEVLGLDPEEAILASAKEGIGIEE 173 Query: 324 LCWDVMTFI 332 + ++ I Sbjct: 174 ILEAIVNRI 182 >3PEN-A nrPDB Length = 403 Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 64/186 (34%), Gaps = 14/186 (7%) Query: 162 VGMLGMPNAGKSTFIRAVSAA-KPKVADYPFTTLV------PSLGVVRMDNEKSFVVADI 214 +G++G + GK+T ++A++ K Y T + V + KS D Sbjct: 11 IGVVGHVDHGKTTLVQAITGIWTSKKLGYAETNIGVCESCKKPEAYVTEPSCKSCGSDDE 70 Query: 215 PGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLA 274 P + + G L L I + +P + E + Sbjct: 71 PKFLRRISFIDAPGHEVLMATMLSGAALMDGAILVVAANEPFPQPQT--REHFVALGIIG 128 Query: 275 TKPRWLVFNKIDLLDKVEAEEKAKAIAE----ALGWEDKYYLISAASGLGVKDLCWDVMT 330 K +V NK+D++ K EA + + I + +SA + + L + + Sbjct: 129 VKNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTWAENVPIIPVSALHKINIDSLI-EGIE 187 Query: 331 FIIENP 336 I+ P Sbjct: 188 EYIKTP 193 >2AL7-A nrPDB Length = 186 Score = 39.3 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 64/154 (41%), Gaps = 14/154 (9%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEG 220 ++ ++G+ +GK+TF+ +++ + P T+ ++ V + + DI G Sbjct: 24 ELTLVGLQYSGKTTFVNVIASGQFSEDMIP--TVGFNMRKVT-KGNVTIKIWDIGG---- 76 Query: 221 AAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWL 280 + ++ ++++ID + + N + + L+K L P + Sbjct: 77 ---QPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNE--LHNLLDK--PQLQGIPVLV 129 Query: 281 VFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLIS 314 + NK DL + ++ ++ + + + + + S Sbjct: 130 LGNKRDLPNALDEKQLIEKMNLSAIQDREICCYS 163 >1X3S-A nrPDB Length = 195 Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 72/197 (36%), Gaps = 20/197 (10%) Query: 142 TNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVV 201 ++G+ G ++L L +L ++G GKS+ + + + + + Sbjct: 2 SSGSSGMDEDVLTTLKIL----IIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTI 57 Query: 202 RMDNEK-SFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENAR 260 +D K + D G + + ++ + D+ D ++N Sbjct: 58 SVDGNKAKLAIWDTAG-------QERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNW- 109 Query: 261 IIISELEKYSQDLATKPRWLVFNKIDLL-DKVEAEEKAKAIAEALGWEDKYYLISAASGL 319 ++ELE Y LV NKID +V+ E K + + SA + Sbjct: 110 --LNELETYCTR-NDIVNMLVGNKIDKENREVDRNEGLKFARKH---SMLFIEASAKTCD 163 Query: 320 GVKDLCWDVMTFIIENP 336 GV+ +++ II+ P Sbjct: 164 GVQCAFEELVEKIIQTP 180 >4QXA-A nrPDB Length = 208 Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 64/181 (35%), Gaps = 10/181 (5%) Query: 157 MLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEK-SFVVADIP 215 L + +LG GKS+ + K + + + +D + + D Sbjct: 6 SSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTA 65 Query: 216 GLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAT 275 GL L F + + C + + D + I +++ ++ + Sbjct: 66 GLERF----RSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADV----KEPES 117 Query: 276 KPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIEN 335 P ++ NK D+ ++ + E+A+A + G + Y+ SA V + + I+ Sbjct: 118 FPFVILGNKTDIKERQVSTEEAQAWCKDNG-DYPYFETSAKDSTNVAAAFEEAVRRILAT 176 Query: 336 P 336 Sbjct: 177 E 177 >4ILE-A nrPDB Length = 184 Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 64/154 (41%), Gaps = 14/154 (9%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEG 220 ++ ++G+ +GK+TF+ +++ + P T+ ++ + + + DI G Sbjct: 24 ELTLVGLQYSGKTTFVNVIASGQFNEDMIP--TVGFNMRKIT-KGNVTIKLWDIGG---- 76 Query: 221 AAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWL 280 + ++ +++++D + + +N + + L+K L P + Sbjct: 77 ---QPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNE--LHNLLDK--PQLQGIPVLV 129 Query: 281 VFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLIS 314 + NK DL ++ +E + + + + + S Sbjct: 130 LGNKRDLPGALDEKELIEKMNLSAIQDREICCYS 163 >3WBI-A nrPDB Length = 606 Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 64/213 (30%), Gaps = 68/213 (31%) Query: 164 MLGMPNAGKSTFIRAVSAAKPKVADYPFTT---------LVPSLGVVRMDNEKSFVVADI 214 +LG + GK+ + + + + T + ++ E D+ Sbjct: 14 ILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTFDV 73 Query: 215 PGL--IEGAAEGAGLGIRFLKHLER-----CRVLLHLIDIDPIDGTDPVENARIIISELE 267 PGL I+ G +L C + + +IDI +E+ +++ Sbjct: 74 PGLLVIDTP------GHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRDR-- 125 Query: 268 KYSQDLATKPRWLVFNKIDLL------------------------------DKVEAEEKA 297 P + NKID L K++ E Sbjct: 126 -------KAPFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAE 178 Query: 298 KAIAEALGWEDK-------YYLISAASGLGVKD 323 + + L +++K SA +G GV D Sbjct: 179 QGLNSELYFQNKNMSKYVSIVPTSAVTGEGVPD 211 >1YZG-A nrPDB Length = 179 Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 69/178 (38%), Gaps = 24/178 (13%) Query: 161 DVGMLGMPNAGKST-FIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIE 219 V ++G+ NAGK+T + + + T+ ++ + + N F++ DI G Sbjct: 18 KVIIVGLDNAGKTTILYQFLMNEVVHTSP----TIGSNVEEIVVKNTH-FLMWDIGG--- 69 Query: 220 GAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYS--QDLATKP 277 L + + ++ ++D E I EL + +DL Sbjct: 70 ----QESLRSSWNTYYSNTEFIILVVDSIDR------ERLAITKEELYRMLAHEDLRKAA 119 Query: 278 RWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLIS--AASGLGVKDLCWDVMTFII 333 + NK D+ + A E +K + + + +++ S A +G G+ + MT I Sbjct: 120 VLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQ-GLEWMTSRI 176 >4V0N-A nrPDB Length = 169 Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 59/168 (35%), Gaps = 23/168 (13%) Query: 162 VGMLGMPNAGKSTFIRAVS---AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI 218 V ++G+ N+GK+T I + +VA T+ +F V D+ G Sbjct: 9 VLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVGFTVDEVE-----KGPLTFTVFDMSG-- 61 Query: 219 EGAAEGAGLGIRFLKHLERCRVLLHLID-IDPIDGTDPVENARIIISELEKYSQDLATKP 277 G + + ++ ++ ++D D + + ++ ++ P Sbjct: 62 ----AGRYRTL-WEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKH-----SNMRKVP 111 Query: 278 RWLVFNKIDLLDKVEAEEKAKAIA--EALGWEDKYYLISAASGLGVKD 323 NK DL + E A+A+ + + + +G GV Sbjct: 112 ILYFANKKDLPVAMPPVEIAQALGLDDIKDRPWQIVPSNGLTGEGVDK 159 >2H57-A nrPDB Length = 190 Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 15/162 (9%) Query: 165 LGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEG 224 LG+ N+GK+T I + + + + T+ S+ + + SF V D+ G Sbjct: 27 LGLDNSGKTTIINKLKPSNAQSQNIL-PTIGFSIEKFK-SSSLSFTVFDMSG-------- 76 Query: 225 AGLGIRFLKH-LERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFN 283 G +H + + ++ +ID D V + + L P N Sbjct: 77 QGRYRNLWEHYYKEGQAIIFVIDSS--DRLRMVVAKEELDTLLNHPDIKHRRIPILFFAN 134 Query: 284 KIDLLDKV-EAEEKAKAIAEALGW-EDKYYLISAASGLGVKD 323 K+DL D V + E + A G G+++ Sbjct: 135 KMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQE 176 >3BCF-A nrPDB Length = 599 Score = 38.9 bits (89), Expect = 0.004, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 48/144 (33%), Gaps = 11/144 (7%) Query: 246 DIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALG 305 D+ D V ELE L + F+ + L ++ A+ + + Sbjct: 191 DLGEFDQKGTVRTKYGTKGELENAIDALHNNDIKVYFDAV-LNHRMGADYAETVLLDENS 249 Query: 306 WEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQLEEIA 365 + I A +G + F + WDDY ++ + + Sbjct: 250 RDKPGQYIKAWTGFNFPGRNGEYSNFTWNGQCFDGTD----------WDDYSKESGKYLF 299 Query: 366 EEDDEDWDDDWDEDDEEGVEFIYK 389 +E DW +WDED G + Y+ Sbjct: 300 DEKSWDWTYNWDEDYLMGADVDYE 323 >1WMS-A nrPDB Length = 177 Score = 38.6 bits (88), Expect = 0.005, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 63/181 (34%), Gaps = 10/181 (5%) Query: 157 MLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEK-SFVVADIP 215 L V +LG GKS+ + K + + + +D + + D Sbjct: 5 SSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTA 64 Query: 216 GLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAT 275 G L F + + C + + D + I +++ ++ + Sbjct: 65 G----QERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADV----KEPES 116 Query: 276 KPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIEN 335 P ++ NKID+ ++ + E+A+A G + Y+ SA V + + ++ Sbjct: 117 FPFVILGNKIDISERQVSTEEAQAWCRDNG-DYPYFETSAKDATNVAAAFEEAVRRVLAT 175 Query: 336 P 336 Sbjct: 176 E 176 >5LDD-C nrPDB Length = 207 Score = 38.6 bits (88), Expect = 0.005, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 60/176 (34%), Gaps = 20/176 (11%) Query: 155 ELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYP------FTTLVPSLGVVRMDNEKS 208 +L V +LG GK++ + K A Y F T V+ D + + Sbjct: 6 RKKVLLKVIILGDSGVGKTSLMNQYVNKK-FSASYKATIGADFLTRE----VMVDDRQVT 60 Query: 209 FVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEK 268 + D G LG+ F + + C ++ + + D D + +I + Sbjct: 61 MQLWDTAG----QERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLI----QA 112 Query: 269 YSQDLATKPRWLVFNKIDLLDKVE-AEEKAKAIAEALGWEDKYYLISAASGLGVKD 323 +D P ++ KID+ + K Y+ SA + V++ Sbjct: 113 SPRDPENFPFVVLGIKIDVEESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEE 168 >5UB8-A nrPDB Length = 222 Score = 38.2 bits (87), Expect = 0.007, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 66/185 (35%), Gaps = 15/185 (8%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEK-SFVVADIPGL 217 L + ++G GKS + + + + + + + +D ++ + D G Sbjct: 15 LYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDTAG- 73 Query: 218 IEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKP 277 + I + L + DI + E+ + EL++++ A Sbjct: 74 -----QERYRAITS-AYYRGAVGALIVYDIAKTES---YESVSRWLKELKEHAD--ANII 122 Query: 278 RWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPV 337 LV NK D LD + A +A A+ + SA S V DL + + I + Sbjct: 123 IELVGNKSD-LDHLRAVPTEEAKNFAMENNLLFTEASALSSDNV-DLSFHQLLKNIYEMI 180 Query: 338 VQAEE 342 + + Sbjct: 181 SKHQL 185 >4V8Z-CV nrPDB Length = 586 Score = 37.8 bits (86), Expect = 0.007, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 64/213 (30%), Gaps = 68/213 (31%) Query: 164 MLGMPNAGKSTFIRAVSAAKPKVADYPFTT---------LVPSLGVVRMDNEKSFVVADI 214 +LG + GK+ + + + + T + ++ E D+ Sbjct: 10 ILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGATYFPIDAIKAKTKVMAEYEKQTFDV 69 Query: 215 PGL--IEGAAEGAGLGIRFLKHLER-----CRVLLHLIDIDPIDGTDPVENARIIISELE 267 PGL I+ G +L C + + +IDI +E+ +++ Sbjct: 70 PGLLVIDTP------GHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRDR-- 121 Query: 268 KYSQDLATKPRWLVFNKIDLL------------------------------DKVEAEEKA 297 P + NKID L K++ E Sbjct: 122 -------KAPFVVALNKIDRLYDWKAIPNNSFRDSFAKQSRAVQEEFQSRYSKIQLELAE 174 Query: 298 KAIAEALGWEDK-------YYLISAASGLGVKD 323 + + L +++K SA +G GV D Sbjct: 175 QGLNSELYFQNKNMSKYVSIVPTSAVTGEGVPD 207 >5MVF-A nrPDB Length = 523 Score = 37.8 bits (86), Expect = 0.008, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 69/228 (30%), Gaps = 66/228 (28%) Query: 129 RFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVAD 188 R + R +P + + + ++G + GK+TFIR + D Sbjct: 16 RKVLPLEEAYRFHEFHSPALED---ADFENKPMILLVGQYSTGKTTFIRYLLE-----QD 67 Query: 189 YPFTTLVPSL------GVVRMDNE------------------------------------ 206 +P + P V+ + E Sbjct: 68 FPGMRIGPEPTTDSFIAVMYGETEGSTPGNALVVDPKKPFRKLSRFGNAFLNRFMCSQLP 127 Query: 207 ----KSFVVADIPGLIEGAAEGAGLGIRFLKHL----ERCRVLLHLIDIDPIDGTDPVEN 258 KS + D PG++ G + G F + L ER ++ L D +D +D Sbjct: 128 NQVLKSISIIDSPGILSGEKQRISRGYDFCQVLQWFAERVDRIILLFDAHKLDISDEFSE 187 Query: 259 ARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGW 306 A I + +V NK D +D + A+ +LG Sbjct: 188 A---IKAFRGQDDKIR-----VVLNKADQVDTQQLMRVYGALMWSLGK 227 >5TV4-A nrPDB Length = 605 Score = 37.8 bits (86), Expect = 0.008, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 41/125 (32%), Gaps = 18/125 (14%) Query: 110 KHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPN 169 G+R++ G N F P R + L++ V ++G Sbjct: 352 DEGKRVIERATGDVEFRNVTFTYPGRDVPAL---------RNINLKIPAGKTVALVGRSG 402 Query: 170 AGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGI 229 +GKST ++ F + ++ + + + +A + + ++ L Sbjct: 403 SGKSTIASLITR---------FYDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFN 453 Query: 230 RFLKH 234 + + Sbjct: 454 DTVAN 458 >2F9L-A nrPDB Length = 199 Score = 37.8 bits (86), Expect = 0.009, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 61/177 (34%), Gaps = 18/177 (10%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNE-KSFVVADIPGL 217 L V ++G GKS + + + + + + +++D + + D G Sbjct: 5 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAG- 63 Query: 218 IEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKP 277 + L + DI EN + EL ++ + Sbjct: 64 ------QERYRRITSAYYRGAVGALLVYDIAKHL---TYENVERWLKELRDHAD--SNIV 112 Query: 278 RWLVFNKIDL--LDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFI 332 LV NK DL L V +E A+A AE + SA V++ +++T I Sbjct: 113 IMLVGNKSDLRHLRAVPTDE-ARAFAEK--NNLSFIETSALDSTNVEEAFKNILTEI 166 >3RAB-A nrPDB Length = 169 Score = 37.8 bits (86), Expect = 0.009, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 67/175 (38%), Gaps = 17/175 (9%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEK-SFVVADIPGLIE 219 + ++G + GK++F+ + A + + + ++++ + D G Sbjct: 7 KILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAG--- 63 Query: 220 GAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRW 279 + + + DI + + V++ + + Sbjct: 64 ----QERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWST-----QIKTYSWDNAQVL 114 Query: 280 LVFNKIDLL-DKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFII 333 LV NK D+ ++V + E+ + +A+ LG+E ++ SA + VK ++ + +I Sbjct: 115 LVGNKCDMEDERVVSSERGRQLADHLGFE--FFEASAKDNINVKQ-TFERLVDVI 166 >2EW1-A nrPDB Length = 201 Score = 37.8 bits (86), Expect = 0.009, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 16/178 (8%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEK-SFVVADIPGL 217 L + ++G GK+ +R + + + V ++ EK + D G Sbjct: 26 LFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAG- 84 Query: 218 IEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKP 277 + L+ DI + R + L + Q + K Sbjct: 85 ------QERFRSITQSYYRSANALILTYDITCEESF------RCLPEWLREIEQYASNKV 132 Query: 278 R-WLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIE 334 LV NKIDL ++ E ++ +A + + Y SA V+ L D+ +I Sbjct: 133 ITVLVGNKIDLAERREVSQQ-RAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLIS 189 >5FBL-B nrPDB Length = 221 Score = 37.4 bits (85), Expect = 0.010, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 62/181 (34%), Gaps = 18/181 (9%) Query: 155 ELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNE-KSFVVAD 213 E L V ++G GKS + + + + + + +++D + + D Sbjct: 12 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 71 Query: 214 IPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDL 273 G + I + L + DI EN + EL ++ Sbjct: 72 TAG------QERYRAITS-AYYRGAVGALLVYDIAKHL---TYENVERWLKELRDHAD-- 119 Query: 274 ATKPRWLVFNKIDL--LDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTF 331 + LV NK DL L V +E A+A AE + SA V+ ++T Sbjct: 120 SNIVIMLVGNKSDLRHLRAVPTDE-ARAFAEK--NGLSFIETSALDSTNVEAAFQTILTE 176 Query: 332 I 332 I Sbjct: 177 I 177 >1H65-A nrPDB Length = 270 Score = 37.4 bits (85), Expect = 0.011, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 50/125 (40%), Gaps = 12/125 (9%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFV-VADIPGLIE 219 + ++G GKS+ + ++ + V+ PF + P +V + + D PGLIE Sbjct: 41 TILVMGKGGVGKSSTVNSIIGERV-VSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIE 99 Query: 220 GAAEG---AGLGIRFLKHLERCRVLLHL--IDIDPIDGTDPVENARIIISELEKYSQDLA 274 G + FL + VLL++ +D +D D + I + + + + Sbjct: 100 GGYINDMALNIIKSFLLD-KTIDVLLYVDRLDAYRVDNLDKLVAKAIT----DSFGKGIW 154 Query: 275 TKPRW 279 K Sbjct: 155 NKAIV 159 >4UJ4-A nrPDB Length = 185 Score = 37.4 bits (85), Expect = 0.011, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 61/181 (33%), Gaps = 18/181 (9%) Query: 155 ELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNE-KSFVVAD 213 E L V ++G GKS + + + + + + +++D + + D Sbjct: 6 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 65 Query: 214 IPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDL 273 GL + L + DI EN + EL ++ Sbjct: 66 TAGL-------ERYRAITSAYYRGAVGALLVYDIAKHL---TYENVERWLKELRDHAD-- 113 Query: 274 ATKPRWLVFNKIDL--LDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTF 331 + LV NK DL L V +E A+A AE + SA V+ ++T Sbjct: 114 SNIVIMLVGNKSDLRHLRAVPTDE-ARAFAEK--NGLSFIETSALDSTNVEAAFQTILTE 170 Query: 332 I 332 I Sbjct: 171 I 171 >2GAO-A nrPDB Length = 208 Score = 37.4 bits (85), Expect = 0.012, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 31/175 (17%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEG 220 + LG+ NAGK+T + + P TL P+ + + +F D+ G Sbjct: 37 KLVFLGLDNAGKTTLLHML-KDDRLGQHVP--TLHPTSEELTIAG-MTFTTFDLGG---- 88 Query: 221 AAEGAGLGIRFLKHLERCRVLLHLID-IDPIDGTDPVENARIIISELEKYSQDLATKPRW 279 E A + +L ++ L+D D + ++++ + ++ P Sbjct: 89 -HEQARRVWK--NYLPAINGIVFLVDCADHSRLVESKVELNALMTD-----ETISNVPIL 140 Query: 280 LVFNKIDLLDKVEAEEKAK--------------AIAEALGWEDKYYLISAASGLG 320 ++ NKID D + E+ + + E + ++ S G Sbjct: 141 ILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQG 195 >4A2I-V nrPDB Length = 277 Score = 36.6 bits (83), Expect = 0.017, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 9/119 (7%) Query: 216 GLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAT 275 G++E E + L ++ + I P + ++ + L+ Sbjct: 54 GIVEAVHETSVLTRPVKPIAANIDQIVIVSAILPELSLNIIDRYLVGCETLQV------- 106 Query: 276 KPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIE 334 +V NKIDLLD + + + + ++S+ + G+K L + +T I Sbjct: 107 -EPLIVLNKIDLLDDEGMDFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLE-EALTGRIS 163 >6GNI-B nrPDB Length = 167 Score = 36.6 bits (83), Expect = 0.019, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 25/142 (17%) Query: 164 MLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMD---NEKSFVVADIPGLIEG 220 LG+ NAGK+T + + + TL P+ + F D+ G I Sbjct: 6 FLGLDNAGKTTLLHMLKNDR-------LATLQPTWHPTSEELAIGNIKFTTFDLGGHI-- 56 Query: 221 AAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQ--DLATKPR 278 + L + + ++ L+D + D EL+ +L P Sbjct: 57 --QARRLWKDYFPEV---NGIVFLVDAADPERFDEAR------VELDALFNIAELKDVPF 105 Query: 279 WLVFNKIDLLDKVEAEEKAKAI 300 ++ NKID + V E A+ Sbjct: 106 VILGNKIDAPNAVSEAELRSAL 127 >1M2O-B nrPDB Length = 190 Score = 36.6 bits (83), Expect = 0.019, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 25/142 (17%) Query: 164 MLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMD---NEKSFVVADIPGLIEG 220 LG+ NAGK+T + + + TL P+ + F D+ G I Sbjct: 28 FLGLDNAGKTTLLHMLKNDR-------LATLQPTWHPTSEELAIGNIKFTTFDLGGHI-- 78 Query: 221 AAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQ--DLATKPR 278 + L + + ++ L+D + D EL+ +L P Sbjct: 79 --QARRLWKDYFPEV---NGIVFLVDAADPERFDEAR------VELDALFNIAELKDVPF 127 Query: 279 WLVFNKIDLLDKVEAEEKAKAI 300 ++ NKID + V E A+ Sbjct: 128 VILGNKIDAPNAVSEAELRSAL 149 >4RKF-A nrPDB Length = 190 Score = 36.6 bits (83), Expect = 0.019, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 69/198 (34%), Gaps = 24/198 (12%) Query: 138 PRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLV-P 196 P+ + + + + LL ++G + GK++F+ + A + Sbjct: 9 PKWQKDAADQNFDYM---FKLL----IIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 61 Query: 197 SLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPV 256 V R D + D GL + + + D+ D + V Sbjct: 62 VKTVFRHDKRVKLQIWDTAGL-------ERYRTITTAYYRGAMGFILMYDVTNEDSFNSV 114 Query: 257 ENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAE-EKAKAIAEALGWEDKYYLISA 315 ++ + + LV NK D+ D+ E+ + +A+ LG E ++ SA Sbjct: 115 QDWVT-----QIKTYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVE--FFETSA 167 Query: 316 ASGLGVKDLCWDVMTFII 333 + VK ++ + II Sbjct: 168 KENVNVKA-VFERLVDII 184 >1KSG-A nrPDB Length = 186 Score = 36.2 bits (82), Expect = 0.023, Method: Composition-based stats. Identities = 36/180 (20%), Positives = 63/180 (35%), Gaps = 33/180 (18%) Query: 148 DKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLG---VVRMD 204 +REL L LML G+ NAGK+T ++ + T+ P+LG Sbjct: 15 KERELRL-LML-------GLDNAGKTTILKKFNGEDVD-------TISPTLGFNIKTLEH 59 Query: 205 NEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLID-IDPIDGTDPVENARIII 263 + D+ G L + + E L+ ++D D D + ++ Sbjct: 60 RGFKLNIWDVGG-------QKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLL 112 Query: 264 SELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYL--ISAASGLGV 321 E + LA + NK DL + +A+ + + SA +G + Sbjct: 113 VE-----ERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDL 167 >2YC4-C nrPDB Length = 208 Score = 36.2 bits (82), Expect = 0.026, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 60/175 (34%), Gaps = 18/175 (10%) Query: 148 DKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPK-VADYPFTT-LVPSLGVVRMDN 205 + + + + L V ++G GKS I ++ K + DY T+ + + V + + Sbjct: 9 EVKPIDITATLRCKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPD 68 Query: 206 ---EKSFVVADIPG--LIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENAR 260 + D G L + G+ + +L + D+ ++ + + Sbjct: 69 TTVSVELFLLDTAGSDLYKEQISQYWNGVYY--------AIL-VFDVSSMESFESCKAWF 119 Query: 261 IIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISA 315 ++ + LV NK DL + A A ++ +SA Sbjct: 120 ELLKSARPDRER--PLRAVLVANKTDLPPQRHQVRLDMAQDWATTNTLDFFDVSA 172 >2OCB-A nrPDB Length = 180 Score = 35.9 bits (81), Expect = 0.032, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 60/181 (33%), Gaps = 10/181 (5%) Query: 157 MLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEK-SFVVADIP 215 LL V +LG GKS+ + K + + + +D + + D Sbjct: 5 SLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTA 64 Query: 216 GLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAT 275 G L F + + C + + D + + I +++ +D Sbjct: 65 G----QERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADV----KDPEH 116 Query: 276 KPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIEN 335 P ++ NK+D D+ E+A+ G + Y SA V + + ++ Sbjct: 117 FPFVVLGNKVDKEDRQVTTEEAQTWCMENG-DYPYLETSAKDDTNVTVAFEEAVRQVLAV 175 Query: 336 P 336 Sbjct: 176 E 176 >3LXX-A nrPDB Length = 239 Score = 35.9 bits (81), Expect = 0.035, Method: Composition-based stats. Identities = 26/168 (15%), Positives = 49/168 (29%), Gaps = 19/168 (11%) Query: 124 GLGNTRFKS-SVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAA 182 G N F+ + PR + ++G AGKS ++ Sbjct: 10 GRENLYFQGGPGRQEPRNSQ-----------------LRIVLVGKTGAGKSATGNSILGR 52 Query: 183 KPKVADYPFTTLVPS-LGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVL 241 K + ++ E VV D PG+ + A ++ + Sbjct: 53 KVFHSGTAAKSITKKCEKRSSSWKETELVVVDTPGIFDTEVPNAETSKEIIRCILLTSPG 112 Query: 242 LHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLD 289 H + + G E + L+ + + + + K DL D Sbjct: 113 PHALLLVVPLGRYTEEEHKATEKILKMFGERARSFMILIFTRKDDLGD 160 >5XR6-A nrPDB Length = 194 Score = 35.9 bits (81), Expect = 0.035, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 60/181 (33%), Gaps = 26/181 (14%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAKPKVAD-----YPFTT-LVPSLGVVRMDNEKSFVVA 212 L + ++G GKS + + + + F T G V + Sbjct: 25 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKV-----VKAQIW 79 Query: 213 DIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQD 272 D G + I + L + D+ ENA + EL ++ Sbjct: 80 DTAG------QERYRAITS-AYYRGAVGALLIYDVTRHATF---ENAARWLRELRGHTD- 128 Query: 273 LATKPRWLVFNKIDLLDKVEAE-EKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTF 331 L+ NK DL V + E+AKA AE + SA V++ +V+T Sbjct: 129 -PNIVVMLIGNKCDLRHLVAVKTEEAKAFAER--ESLYFMETSALDATNVENAFTEVLTQ 185 Query: 332 I 332 I Sbjct: 186 I 186 >3VHL-B nrPDB Length = 195 Score = 35.5 bits (80), Expect = 0.039, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 71/192 (36%), Gaps = 24/192 (12%) Query: 164 MLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAE 223 ++G GK+ + + + K P T+ + V M + + + GL + A + Sbjct: 15 VVGDGAVGKNCLLISYTTNKFPSEYVP--TVFDNYAVTVMIGGEPYTL----GLFDTAGQ 68 Query: 224 GAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFN 283 +R L + + V L + + V+ + + + P LV Sbjct: 69 EDYDRLRPLSY-PQTDVFLVCFSVVSPSSFENVKE-----KWVPEITHHCPKTPFLLVGT 122 Query: 284 KIDLLDKVE-----AEEKAKAI----AEALGWE---DKYYLISAASGLGVKDLCWDVMTF 331 +IDL D A+ K K I AE L + KY SA + G+K++ + + Sbjct: 123 QIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILA 182 Query: 332 IIENPVVQAEEA 343 +E P + Sbjct: 183 ALEPPEPKKSRR 194 >3BFK-A nrPDB Length = 181 Score = 35.5 bits (80), Expect = 0.040, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 54/178 (30%), Gaps = 15/178 (8%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSF--VVADIPG 216 L + ++G GKS + + + + + + +++ N K + D G Sbjct: 7 LFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDTAG 66 Query: 217 LIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATK 276 + I + L + DI + EN + EL + Sbjct: 67 ------QERYRAITS-AYYRGAVGALLVYDITKKNSF---ENIEKWLKELR--DNADSNI 114 Query: 277 PRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIE 334 LV NK D L + A A + + SA V+ ++ I Sbjct: 115 VILLVGNKSD-LKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLLNEIYN 171 >1S0U-A nrPDB Length = 408 Score = 35.5 bits (80), Expect = 0.045, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 64/204 (31%), Gaps = 44/204 (21%) Query: 162 VGMLGMPNAGKSTFIRAVSA--------------------AKPKVADYP----FTTLVPS 197 +GM+G + GK++ +A++ A ++ P +TT Sbjct: 11 IGMVGHVDHGKTSLTKALTGVWTDRHSEELRRGISIRLGYADCEIRKCPQCGTYTTKPRC 70 Query: 198 LG-VVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPV 256 + + + D PG L L + +I + Sbjct: 71 PNCLAETEFLRRVSFVDSPG-------HETLMATMLSGASLMDGAILVIAANEPCPQPQT 123 Query: 257 ENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAE----ALGWEDKYYL 312 + + + L +V NKIDL+D+ +AEE + I E + Sbjct: 124 KEHLMALEILG-------IDKIIIVQNKIDLVDEKQAEENYEQIKEFVKGTIAENAPIIP 176 Query: 313 ISAASGLGVKDLCWDVMTFIIENP 336 ISA + D+ + I P Sbjct: 177 ISAHHEANI-DVLLKAIQDFIPTP 199 >1EK0-A nrPDB Length = 170 Score = 35.5 bits (80), Expect = 0.047, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 62/167 (37%), Gaps = 15/167 (8%) Query: 161 DVGMLGMPNAGKSTF-IRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIE 219 + +LG GKS+ +R VS + + + V ++ F + D G Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQER 64 Query: 220 GAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRW 279 A+ L + ++ + V+ D T P + E + Q Sbjct: 65 FAS----LAPMYYRNAQAALVVY--------DVTKPQSFIKARHWVKELHEQASKDIIIA 112 Query: 280 LVFNKIDLLDKVEAEEKAKAIAEALGWED--KYYLISAASGLGVKDL 324 LV NKID+L + + A+ E L E ++ SA +G V D+ Sbjct: 113 LVGNKIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDV 159 >3CPJ-B nrPDB Length = 223 Score = 34.7 bits (78), Expect = 0.062, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 63/190 (33%), Gaps = 19/190 (10%) Query: 158 LLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEK-SFVVADIPG 216 LL + ++G GKS + + + + + + + ++ ++ + D G Sbjct: 12 LLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKRIKAQIWDTAG 71 Query: 217 LIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATK 276 + I + L + DI EN +SEL + + D Sbjct: 72 ------QERYRAITS-AYYRGAVGALIVYDISKSSS---YENCNHWLSELRENADD--NV 119 Query: 277 PRWLVFNKIDL--LDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIE 334 L+ NK DL L V EE E + + SA + V ++ + I Sbjct: 120 AVGLIGNKSDLAHLRAVPTEESKTFAQE---NQLLFTETSALNSENVDK-AFEELINTIY 175 Query: 335 NPVVQAEEAK 344 V + + Sbjct: 176 QKVSKHQMDL 185 >3T5D-A nrPDB Length = 274 Score = 34.7 bits (78), Expect = 0.070, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 53/174 (30%), Gaps = 40/174 (22%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPF------TTLVPSLGVVRMDNEK---SFVV 211 + ++G GKST I ++ +YP T+ V + + Sbjct: 10 TLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLLTI 69 Query: 212 ADIPGLIEGAAEGAGLGIRFLKHLE---------------------RCRVLLHLIDIDPI 250 D PG + A + + + +++ R + L+ I Sbjct: 70 VDTPGFGD-AVDNSNCWQPVIDYIDSKFEDYLNAESRVNRRQMPDNRVQCCLYFIAPSGH 128 Query: 251 DGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEAL 304 G P++ +E + + K D L E ++ K I + + Sbjct: 129 -GLKPLD--------IEFMKRLHEKVNIIPLIAKADTLTPEECQQFKKQIMKEI 173 >5H7J-A nrPDB Length = 743 Score = 34.7 bits (78), Expect = 0.076, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 60/164 (36%), Gaps = 35/164 (21%) Query: 147 GDKRELLLELMLLADVGMLGMPNAGKSTFI-RAVSAAKPKVADYPFTTLV---------- 195 +EL+L+ + ++G+ + GK+T ++ A + LV Sbjct: 12 AKIKELMLQPERIRNIGIAAHIDHGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQAR 71 Query: 196 ------PSLGVVRMDNEKSFVV--ADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDI 247 ++ +V K +++ D PG ++ G + + ++ ++D Sbjct: 72 GITINAANVSMVHNYEGKDYLINLIDTPGHVD-------FGGDVTRAMRAIDGVIIVVDA 124 Query: 248 DPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKV 291 ++G P ++ L +Y + L NK+D L + Sbjct: 125 --VEGVMPQTET-VVRQALREYVK------PVLFINKVDRLIRE 159 >3WYF-A nrPDB Length = 219 Score = 34.7 bits (78), Expect = 0.078, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 77/203 (37%), Gaps = 37/203 (18%) Query: 161 DVGMLGMPNAGKSTFIR----------AVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFV 210 + ++G GK+TF++ ++ +V F T + G ++ D Sbjct: 14 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYT---NFGEIKFD------ 64 Query: 211 VADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYS 270 V D GL + G G +C +++ + +N +L + Sbjct: 65 VWDTAGLEK--FGGLRDGYYINA---QCAIIMF-----DVTSRITYKNVPNWHRDLVRVC 114 Query: 271 QDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMT 330 +++ P L NK+D+ ++ + KAK I +YY ISA S + + Sbjct: 115 ENI---PIVLCGNKVDVKER---KVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLAR 168 Query: 331 FIIENPVVQ--AEEAKQPEKVEF 351 + NP ++ A A P +V+ Sbjct: 169 KLAGNPQLEFVASPALAPPEVQV 191 >5H7K-A nrPDB Length = 397 Score = 34.3 bits (77), Expect = 0.080, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 60/164 (36%), Gaps = 35/164 (21%) Query: 147 GDKRELLLELMLLADVGMLGMPNAGKSTFI-RAVSAAKPKVADYPFTTLV---------- 195 +EL+L+ + ++G+ + GK+T ++ A + LV Sbjct: 12 AKIKELMLQPERIRNIGIAAHIDHGKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQAR 71 Query: 196 ------PSLGVVRMDNEKSFVV--ADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDI 247 ++ +V K +++ D PG ++ G + + ++ ++D Sbjct: 72 GITINAANVSMVHNYEGKDYLINLIDTPGHVD-------FGGDVTRAMRAIDGVIIVVDA 124 Query: 248 DPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKV 291 ++G P ++ L +Y + L NK+D L + Sbjct: 125 --VEGVMPQTET-VVRQALREYVK------PVLFINKVDRLIRE 159 >6HLU-A nrPDB Length = 974 Score = 34.3 bits (77), Expect = 0.083, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 72/236 (30%), Gaps = 56/236 (23%) Query: 128 TRFKSSV-NRTPRQKTNGTPG--------DKRELLLELMLLA---DVGMLGMPNAGKSTF 175 T F + + + P G ++ E ++ V ++G AGK++ Sbjct: 437 TFFDNPLESPPPEIVKQGKEAVRQYFQSIEEARSKGEALVHLQEIKVHLIGDGMAGKTSL 496 Query: 176 IRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHL 235 ++ + T P N + + A GL L Sbjct: 497 LKQLIGE----------TFDPKESQTHGLNV----------VTKQAPNIKGLEND--DEL 534 Query: 236 ERCRVLLHLIDIDPIDGTDPVENARIIISE-----------------LEKYSQDLATKPR 278 + C L H D + + S L + P Sbjct: 535 KEC--LFHFWDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDSNKHYWLRHIEKYGGKSPV 592 Query: 279 WLVFNKIDLLDKVEAEEKAKAIAEAL-GWEDKYYLISAASGLGVKDLCWDVMTFII 333 +V NKID + + K I E E++++ IS +G GV+ + + + ++ Sbjct: 593 IVVMNKID--ENPSYNIEQKKINERFPAIENRFHRISCKNGDGVESIAKSLKSAVL 646 >6FEC-S nrPDB Length = 422 Score = 34.3 bits (77), Expect = 0.085, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 84/233 (36%), Gaps = 38/233 (16%) Query: 162 VGMLGMPNAGKSTFIRAVSAAK-PKVADYPFTTLVPSLGVVRMDNEKSFVVAD------- 213 +G +G GKST ++A+S + + + LG N K + + D Sbjct: 6 IGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLG---YANAKIYKLDDPSCPRPE 62 Query: 214 --------IPGLIEGAAEGAGLGIRFLKHLERCRVLLH-LIDIDPIDGTDPVENARIII- 263 P G + ++H+ H ++ ++G ++ A ++I Sbjct: 63 CYRSCGSSTPDEFPTDIPGTKGNFKLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIA 122 Query: 264 ----------SELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAE----ALGWEDK 309 SE + + K ++ NKIDL+ + +A+E+ + I + Sbjct: 123 GNESCPQPQTSEHLAAIEIMKLKHILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAP 182 Query: 310 YYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQLE 362 ISA ++ +C ++ I PV + +P + D ++ E Sbjct: 183 IIPISAQLKYNIEVVCEYIVKKI---PVPPRDFTSEPRLIVIRSFDVNKPGCE 232 >6N0I-A nrPDB Length = 706 Score = 34.3 bits (77), Expect = 0.089, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 68/175 (38%), Gaps = 25/175 (14%) Query: 202 RMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARI 261 + ++ F + D PG ++ E R L+ L+ V+ DG +P + Sbjct: 81 QFAHKYRFNIIDTPGHVDFTIEVE----RSLRVLDGAVVVF-----SGADGVEP--QSET 129 Query: 262 IISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGW---EDKYYLISAASG 318 + + KY PR NK+D + K I + LG + + S + Sbjct: 130 VWRQANKY-----HVPRLAYINKMDR-QGADFLRVVKQIDQRLGHHPVPIQLAIGSEENF 183 Query: 319 LGVKDLCWDVMTFIIENPVVQAE---EAKQPEKVEFMWDDYHRQQLEEIAEEDDE 370 +G DL M I N Q E + P +++ + D++ +E AE +DE Sbjct: 184 MGQIDLV--KMKAIYWNDADQGTSYREEEIPAELKALADEWRAHMIEAAAEANDE 236 >3DPU-A nrPDB Length = 535 Score = 34.3 bits (77), Expect = 0.094, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 68/228 (29%), Gaps = 55/228 (24%) Query: 135 NRTPRQKTNGTPG--------DKRELLLELMLLA---DVGMLGMPNAGKSTFIRAVSAAK 183 + P G ++ E ++ V ++G AGK++ ++ + Sbjct: 6 SPPPEIVKQGKEAVRQYFQSIEEARSKGEALVHLQEIKVHLIGDGMAGKTSLLKQLIGE- 64 Query: 184 PKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLH 243 T P N + + A GL L+ C L H Sbjct: 65 ---------TFDPKESQTHGLNV----------VTKQAPNIKGLEND--DELKEC--LFH 101 Query: 244 LIDIDPIDGTDPVENARIIISE-----------------LEKYSQDLATKPRWLVFNKID 286 D + + S L + P +V NKID Sbjct: 102 FWDFGGQEIMHASHQFFMTRSSVYMLLLDSRTDSNKHYWLRHIEKYGGKSPVIVVMNKID 161 Query: 287 LLDKVEAEEKAKAIAEAL-GWEDKYYLISAASGLGVKDLCWDVMTFII 333 + + K I E E++++ IS +G GV+ + + + ++ Sbjct: 162 --ENPSYNIEQKKINERFPAIENRFHRISCKNGDGVESIAKSLKSAVL 207 >3FTQ-A nrPDB Length = 274 Score = 34.3 bits (77), Expect = 0.095, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 51/166 (30%), Gaps = 23/166 (13%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAK-------PKVADYPFTTLVPSLGVVRMDNEK---SFV 210 + ++G GKST I ++ P A+ T+ V ++ Sbjct: 7 TLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIEASTVEIEERGVKLRLT 66 Query: 211 VADIPGLIEGAAEGAGLGIRFLKHLERCRVLL----------HLIDIDPIDGTDPVENAR 260 V D PG + A + +++ H+ID + Sbjct: 67 VVDTPGYGD-AINCRDCFKTIISYIDEQFERYLHDESGLNRRHIIDNRVHCCFYFISPFG 125 Query: 261 IIISELE-KYSQDLATK-PRWLVFNKIDLLDKVEAEEKAKAIAEAL 304 + L+ + + + K V K D L E E K I + + Sbjct: 126 HGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKERERLKKRILDEI 171 >5W75-A nrPDB Length = 392 Score = 34.3 bits (77), Expect = 0.100, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 66/214 (30%), Gaps = 38/214 (17%) Query: 159 LADVGMLGMPNAGKSTFIRAVSA---AKPKVADYPFTTLVP-----------SLGVVRMD 204 +VG +G + GKST A++ K P+ + ++ V + Sbjct: 4 HVNVGTIGHVDHGKSTLTAAITKYLSLKGLAQYVPYDQIDKAPEEKARGITINITHVEYE 63 Query: 205 NEKS-FVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIII 263 EK + D PG + + + + + DG P Sbjct: 64 TEKRHYAHIDCPGHADYIKNMITGAAQMDGAI---------LVVAATDGPMP-------Q 107 Query: 264 SELEKYSQDLATKPRWLVF-NKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVK 322 + P +VF NK D++D E E + L + +Y G V Sbjct: 108 TREHVLLARQVGVPYMIVFINKTDMVDDPELIELVEMEVRDLLSQYEY------PGDEVP 161 Query: 323 DLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDY 356 + + + E K +++ D+Y Sbjct: 162 VIKGSALKALEAPDDPNHEAYKPIQELLDAMDNY 195 >6O81-S nrPDB Length = 472 Score = 33.9 bits (76), Expect = 0.11, Method: Composition-based stats. Identities = 41/233 (17%), Positives = 84/233 (36%), Gaps = 38/233 (16%) Query: 162 VGMLGMPNAGKSTFIRAVSAAK-PKVADYPFTTLVPSLGVVRMDNEKSFVVAD------- 213 +G +G GKST ++A+S + + + LG N K + + D Sbjct: 44 IGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLG---YANAKIYKLDDPSCPRPE 100 Query: 214 --------IPGLIEGAAEGAGLGIRFLKHLERCRVLLH-LIDIDPIDGTDPVENARIII- 263 P G + ++H+ H ++ ++G ++ A ++I Sbjct: 101 CYRSCGSSTPDEFPTDIPGTKGNFKLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIA 160 Query: 264 ----------SELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAE----ALGWEDK 309 SE + + K ++ NKIDL+ + +A+E+ + I + Sbjct: 161 GNESCPQPQTSEHLAAIEIMKLKHILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAP 220 Query: 310 YYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQLE 362 ISA ++ +C ++ I PV + +P + D ++ E Sbjct: 221 IIPISAQLKYNIEVVCEYIVKKI---PVPPRDFTSEPRLIVIRSFDVNKPGCE 270 >2QAG-A nrPDB Length = 361 Score = 33.9 bits (76), Expect = 0.12, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 51/166 (30%), Gaps = 23/166 (13%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAK-------PKVADYPFTTLVPSLGVVRMDNEK---SFV 210 + ++G GKST I ++ P A+ T+ V ++ Sbjct: 39 TLMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLRLT 98 Query: 211 VADIPGLIEGAAEGAGLGIRFLKHLERCRVLL----------HLIDIDPIDGTDPVENAR 260 V D PG + A + +++ H+ID + Sbjct: 99 VVDTPGYGD-AINCRDCFKTIISYIDEQFERYLHDESGLNRRHIIDNRVHCCFYFISPFG 157 Query: 261 IIISELE-KYSQDLATK-PRWLVFNKIDLLDKVEAEEKAKAIAEAL 304 + L+ + + + K V K D L E E K I + + Sbjct: 158 HGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKERERLKKRILDEI 203 >3T5G-A nrPDB Length = 181 Score = 33.9 bits (76), Expect = 0.13, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 57/150 (38%), Gaps = 24/150 (16%) Query: 161 DVGMLGMPNAGKSTFI------RAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADI 214 + +LG + GKS+ + V + P + + FT L+ G E + D Sbjct: 8 KIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIEN-TFTKLITVNGQ-----EYHLQLVDT 61 Query: 215 PGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLA 274 G E + + + ++ + I + + L+ + Sbjct: 62 AG----QDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHG-----KLLDMVGK--V 110 Query: 275 TKPRWLVFNKIDL-LDKVEAEEKAKAIAEA 303 P LV NK DL +++V + E+ KA+AE+ Sbjct: 111 QIPIMLVGNKKDLHMERVISYEEGKALAES 140 >3RWM-B nrPDB Length = 185 Score = 33.6 bits (75), Expect = 0.14, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 18/179 (10%) Query: 159 LADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEK-SFVVADIPGL 217 L + ++G GKS + + + + + + + ++N+K + D GL Sbjct: 10 LFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGL 69 Query: 218 IEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKP 277 I + L + DI EN ++EL + + D Sbjct: 70 ------ERYRAITS-AYYRGAVGALIVYDISKSSS---YENCNHWLTELRENADD--NVA 117 Query: 278 RWLVFNKIDL--LDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIE 334 L+ NK DL L V +E E + + SA + V +++ I + Sbjct: 118 VGLIGNKSDLAHLRAVPTDEAKNFAME---NQMLFTETSALNSDNVDKAFRELIVAIFQ 173 >3MD0-A nrPDB Length = 355 Score = 33.2 bits (74), Expect = 0.18, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 98/292 (33%), Gaps = 49/292 (16%) Query: 98 DQGTGETMGDMTKHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELM 157 D T + + + G R + + S R++ Sbjct: 28 DDDTVDGLATAVRGGDRAALPRA-------ITLVESTRPDHREQAQQLLLRLLPDSGNAH 80 Query: 158 LLADVGMLGMPNAGKSTFIRAV------SAAKPKV-ADYPFTTLVPSLGVVRMDNEKSFV 210 VG+ G+P GKST I A+ + V A P +T + G + D + Sbjct: 81 ---RVGITGVPGVGKSTAIEALGMHLIERGHRVAVLAVDPSSTR--TGGSILGDKTRMAR 135 Query: 211 VADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHL--IDIDPID---------GTDPVENA 259 +A P + +G + VLL D+ I+ + + Sbjct: 136 LAVHPNAYIRPSPTSGTLGGVTRATRETVVLLEAAGFDVILIETVGVGQSEVAVANMVDT 195 Query: 260 RIII------SELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEAL--------G 305 +++ +L+ + + +V NK D EA A+ ++ A+ Sbjct: 196 FVLLTLARTGDQLQGIKKGVLELADIVVVNKADGEHHKEARLAARELSAAIRLIYPREAL 255 Query: 306 WEDKYYLISAASGLGVKDLCWDVMT---FIIENPVVQAEEAKQPEKVEFMWD 354 W +SA G G+ +L WD + ++ + + ++ ++V++ W Sbjct: 256 WRPPVLTMSAVEGRGLAEL-WDTVERHRQVLTG-AGEFDARRRDQQVDWTWQ 305 >3ZJC-A nrPDB Length = 305 Score = 33.2 bits (74), Expect = 0.19, Method: Composition-based stats. Identities = 31/235 (13%), Positives = 78/235 (33%), Gaps = 28/235 (11%) Query: 145 TPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMD 204 + R L + ++G +GKS + + + + + + Sbjct: 7 AESEDRSLR--------IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASRE 58 Query: 205 -NEKSFVVADIPGLIEGAAEGAGLGIRFLKH--LERCRVLLHLIDIDPIDGTDPVENARI 261 + +V D PGL + E + + + C ++ + + E + Sbjct: 59 WQGRDLLVVDTPGLFD-TKESLDTTCKEISRCIISSCPGPHAIVLVLQLGRYTEEEQKTV 117 Query: 262 IISELEKYSQDLATKPRWLVFNKIDLLDKV-------EAEEKAKAIAEALGWEDKYYLIS 314 + ++ A K ++F + + L+ +A+ K+I + G + S Sbjct: 118 AL--IKAVFGKSAMKHMVILFTRKEELEGQSFHDFIADADVGLKSIVKECGNRCCAFSNS 175 Query: 315 AASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDD 369 + K+ + +IE V Q + + DD ++ E + + ++ Sbjct: 176 KKTSKAEKESQVQELVELIEKMV-------QCNEGAYFSDDIYKDTEERLKQREE 223 >2QAG-C nrPDB Length = 418 Score = 33.2 bits (74), Expect = 0.19, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 53/174 (30%), Gaps = 40/174 (22%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPF------TTLVPSLGVVRMDNEK---SFVV 211 + ++G GKST I ++ +YP T+ V + + Sbjct: 33 TLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVEQSKVLIKEGGVQLLLTI 92 Query: 212 ADIPGLIEGAAEGAGLGIRFLKHLE---------------------RCRVLLHLIDIDPI 250 D PG + A + + + +++ R + L+ I Sbjct: 93 VDTPGFGD-AVDNSNCWQPVIDYIDSKFEDYLNAESRVNRRQMPDNRVQCCLYFIAPSGH 151 Query: 251 DGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEAL 304 G P++ +E + + K D L E ++ K I + + Sbjct: 152 -GLKPLD--------IEFMKRLHEKVNIIPLIAKADTLTPEECQQFKKQIMKEI 196 >2P5S-A nrPDB Length = 199 Score = 33.2 bits (74), Expect = 0.20, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 44/136 (32%), Gaps = 15/136 (11%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTT-LVPSLGVVRMDNEKS-FVVADIPGLI 218 + + G GKS+F+ + + T + + + +D E++ + D G Sbjct: 30 KIVLAGDAAVGKSSFLMRLCK-NEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAG-- 86 Query: 219 EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 + + +L L D+ + +I + T P Sbjct: 87 -----QERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIED-----AAHETVPI 136 Query: 279 WLVFNKIDLLDKVEAE 294 LV NK D+ D E Sbjct: 137 MLVGNKADIRDTAATE 152 >1Z22-A nrPDB Length = 168 Score = 33.2 bits (74), Expect = 0.21, Method: Composition-based stats. Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 17/148 (11%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTT-LVPSLGVVRMDNEK-SFVVADIPGLI 218 + ++G GKS+ I+ DY T + +++++E ++ D G Sbjct: 7 KMVVVGNGAVGKSSMIQRYCK-GIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAG-- 63 Query: 219 EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 E + + + + C ++ D E+ I S EK ++ P Sbjct: 64 --QEEFDAITKAYYRGAQACVLVFSTTD---------RESFEAISSWREKVVAEVGDIPT 112 Query: 279 WLVFNKIDLLDKVEAE-EKAKAIAEALG 305 LV NKIDLLD + E+A+ +A+ L Sbjct: 113 ALVQNKIDLLDDSCIKNEEAEGLAKRLK 140 >2WWW-A nrPDB Length = 349 Score = 33.2 bits (74), Expect = 0.23, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 84/241 (34%), Gaps = 45/241 (18%) Query: 162 VGMLGMPNAGKSTFIRA----------------------------------VSAAKPKVA 187 VG+ G P AGKSTFI ++ + Sbjct: 77 VGLSGPPGAGKSTFIEYFGKMLTERGHKLSVLAVDPSSCTSGGSLLGDKTRMTELSRDMN 136 Query: 188 DY--PFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLI 245 Y P T GV R NE + ++ + G E G+G + + + L+ Sbjct: 137 AYIRPSPTRGTLGGVTRTTNE-AILLCEGAGYDIILIETVGVGQSEFAVADMVDMFVLLL 195 Query: 246 DIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALG 305 P G D ++ + I E+ + +V + + V A + + + Sbjct: 196 ---PPAGGDELQGIKRGIIEMADLVAVTKSDGDLIVPARRIQAEYVSALKLLR--KRSQV 250 Query: 306 WEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEE--AKQPEKVEFMWDDYHRQQLEE 363 W+ K ISA SG G+ ++ WD M + + E ++ ++ +MW+ LE Sbjct: 251 WKPKVIRISARSGEGISEM-WDKMKDFQDLMLASGELTAKRRKQQKVWMWNLIQESVLEH 309 Query: 364 I 364 Sbjct: 310 F 310 >6QUZ-A nrPDB Length = 587 Score = 32.8 bits (73), Expect = 0.25, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 13/75 (17%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMD--NEKSFVVADIPGLIE 219 V +LG +GKST + + + P G V +D + ++ + D+ G I Sbjct: 372 VAVLGETGSGKSTLMNLIPRL-----------IDPERGRVEVDELDVRTVKLKDLRGHIS 420 Query: 220 GAAEGAGLGIRFLKH 234 + L +K Sbjct: 421 AVPQETVLFSGTIKE 435 >1G7S-A nrPDB Length = 594 Score = 32.8 bits (73), Expect = 0.26, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 79/248 (31%), Gaps = 51/248 (20%) Query: 160 ADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMD--------NEKSFVV 211 V +LG + GK+T + + + + T + MD K F + Sbjct: 6 PIVSVLGHVDHGKTTLLDHIRGSAVASREAGGITQHIGATEIPMDVIEGICGDFLKKFSI 65 Query: 212 ADI-PGL--IEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIII----- 263 + PGL I+ A +R + + ++DI+ E I+ Sbjct: 66 RETLPGLFFIDTPGHEAFTTLRKRGG-ALADLAILIVDINEGFKPQTQEALNILRMYRTP 124 Query: 264 --------SELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDK------ 309 + + +P F+K D+ + + + K + L E Sbjct: 125 FVVAANKIDRIHGWRVH-EGRPFMETFSKQDIQVQQKLDTKVYELVGKLHEEGFESERFD 183 Query: 310 ----------YYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQ 359 ISA +G G+ +L +M + Q E+++ D R Sbjct: 184 RVTDFASQVSIIPISAITGEGIPELLTMLMG------LAQQYLR---EQLKIEEDSPARG 234 Query: 360 QLEEIAEE 367 + E+ EE Sbjct: 235 TILEVKEE 242 >2IL1-A nrPDB Length = 192 Score = 32.8 bits (73), Expect = 0.26, Method: Composition-based stats. Identities = 26/189 (13%), Positives = 60/189 (31%), Gaps = 17/189 (8%) Query: 147 GDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNE 206 G R +L ++ ++G GK++ + + A + + V + + Sbjct: 18 GSPRPADFKLQVI----IIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGK 73 Query: 207 K-SFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISE 265 K + D G + + ++ + DI + D + +I + Sbjct: 74 KIRLQIWDTAG-------QERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDK 126 Query: 266 LEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLC 325 +L LV NK+D E + ++ SA V ++ Sbjct: 127 YASEDAEL-----LLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIF 181 Query: 326 WDVMTFIIE 334 ++ I++ Sbjct: 182 LKLVDDILK 190 >3FSU-A nrPDB Length = 304 Score = 32.8 bits (73), Expect = 0.28, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 67/190 (35%), Gaps = 30/190 (15%) Query: 166 GMPNAGKS---TFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAA 222 G P S T ++ V+ VA YP + E AD+ L Sbjct: 126 GKPEMYASDLVTLLKEVADFDISVAAYP-----------EVHPEAKSAQADLLNLKRKVD 174 Query: 223 EGAGLGI-RFLKHLE-----RCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATK 276 GA I +F +E R R + ID++ I G PV N + + + + Sbjct: 175 AGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKLADMTNVRI--- 231 Query: 277 PRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENP 336 P W+ + D ++ + + + + +G ++ S GVKD + + + Sbjct: 232 PAWMAQ----MFDGLDDDAETRKL---VGANIAMDMVKILSREGVKDFHFYTLNRAEMSY 284 Query: 337 VVQAEEAKQP 346 + +P Sbjct: 285 AICHTLGVRP 294 >5NO4-Z nrPDB Length = 313 Score = 32.4 bits (72), Expect = 0.31, Method: Composition-based stats. Identities = 36/196 (18%), Positives = 67/196 (34%), Gaps = 27/196 (13%) Query: 144 GTPGDKRELLLELMLLADV----GMLGMPNAGKSTFIRAVSAAKPKVAD-YPFTTLVPSL 198 G P D+ ++ + ADV G + N + T V+ + P V Sbjct: 4 GEP-DEGIVISRFGMHADVESADGDVHRCNI-RRTIRSLVTGDRVVWRPGKPAAEGVNVK 61 Query: 199 GVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVEN 258 G+V +E+ V P +G A ++ + I P + ++ Sbjct: 62 GIVEAVHER-TSVLTRPDFYDGVKPIA----------ANIDQIVIVSAILPELSLNIIDR 110 Query: 259 ARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASG 318 + L+ +V NKIDLLD + + + ++S+ + Sbjct: 111 YLVACETLQ--------IEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQ 162 Query: 319 LGVKDLCWDVMTFIIE 334 G+K L + +T I Sbjct: 163 DGLKPLE-EALTGRIS 177 >3DZ8-A nrPDB Length = 191 Score = 32.4 bits (72), Expect = 0.35, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 61/178 (34%), Gaps = 16/178 (8%) Query: 148 DKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEK 207 + + + ++G + GK++F+ + A + + V ++ Sbjct: 12 ENLYFQGNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKR 71 Query: 208 -SFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISEL 266 + D G + + + DI + + V++ Sbjct: 72 VKLQIWDTAG-------QERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWAT----- 119 Query: 267 EKYSQDLATKPRWLVFNKIDL-LDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKD 323 + + LV NK D+ ++V EK + +AE LG++ ++ SA + V+ Sbjct: 120 QIKTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFD--FFEASAKENISVRQ 175 >2CJW-A nrPDB Length = 192 Score = 32.4 bits (72), Expect = 0.35, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 68/209 (32%), Gaps = 27/209 (12%) Query: 157 MLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVAD--- 213 M V ++G GKST + ++ V+ D + ++ D Sbjct: 4 MTYYRVVLIGEQGVGKSTLANIFAGVHD--------SMDSDCEVLGEDTYERTLMVDGES 55 Query: 214 -IPGLIEGAAEGAGLGIRFLKHLERC-RVLLHLIDIDPIDGTDPVENARIIISELEKYSQ 271 L++ E G H + L + I + RI + Sbjct: 56 ATIILLD-MWENKGENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRAR---- 110 Query: 272 DLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTF 331 P LV NK DL+ E ++ A A+ ++ K+ SAA VK+L Sbjct: 111 QTEDIPIILVGNKSDLVRCREV-SVSEGRACAVVFDCKFIETSAAVQHNVKEL------- 162 Query: 332 IIENPVVQAEEAKQPEKVEFMWDDYHRQQ 360 E V Q + ++ Y +++ Sbjct: 163 -FEGIVRQVRLRRDSKEKNERRLAYQKRK 190 >5FG3-A nrPDB Length = 623 Score = 32.0 bits (71), Expect = 0.40, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 64/231 (27%), Gaps = 62/231 (26%) Query: 142 TNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVV 201 G G++R + V +LG + GK+T + + + T +V Sbjct: 5 KGGGDGERR------LRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIV 58 Query: 202 RMD-----NEKSFVVADIPGLIEGAAEGAGLGIRFLKHLER-----CRVLLHLIDIDPID 251 D E V + +I G G +L R + ++DI Sbjct: 59 PADVIEKIAEPLKKVIPVKLVIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGF 118 Query: 252 GTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLL------------------DKVEA 293 E ++ P + NKID + D Sbjct: 119 KPQTYEALELLKE---------RRVPFLIAANKIDRIPGWKPNPDAPFIETIRRQDPKVR 169 Query: 294 EEKAKAIAEALG-------------------WEDKYYLISAASGLGVKDLC 325 E + + E +G + +SA +G G+ +L Sbjct: 170 EILEQRVYEIVGKMYEAGLPAELFTRIKDFRRKIAIVPVSARTGEGIPELL 220 >1WDT-A nrPDB Length = 665 Score = 32.0 bits (71), Expect = 0.42, Method: Composition-based stats. Identities = 44/243 (18%), Positives = 77/243 (31%), Gaps = 41/243 (16%) Query: 158 LLADVGMLGMPNAGKSTFIRAV------------------SAAKPKVADYPFTTLVPSLG 199 ++ V ++G +GK+T A+ + A TT+ + Sbjct: 8 MIRTVALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEAKLHRTTVRTGVA 67 Query: 200 VVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENA 259 + + F++ D PG + E G LE L + E A Sbjct: 68 PLLFRGHRVFLL-DAPGYGDFVGEIRGA-------LEAADAALVAVSA-EAGVQVGTERA 118 Query: 260 RIIISELEKYSQDLATKPRWLVFNKIDL-LDKVEAEEKAKAIAEALGWEDKYYLISAASG 318 + L PR +V K+D D E ++ + L Sbjct: 119 WTVAERLG--------LPRMVVVTKLDKGGDYYALLEDLRSTLGPIL-PIDLPLYEGGKW 169 Query: 319 LGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDDEDWDDDWDE 378 +G+ D+ +AE PE+ E + RQ++ E E DE + + E Sbjct: 170 VGLIDVFHGKAYRYENGEEREAE--VPPEERERVQRF--RQEVLEAIVETDEGLLEKYLE 225 Query: 379 DDE 381 +E Sbjct: 226 GEE 228 >5YT0-A nrPDB Length = 364 Score = 32.0 bits (71), Expect = 0.45, Method: Composition-based stats. Identities = 36/231 (15%), Positives = 64/231 (27%), Gaps = 62/231 (26%) Query: 142 TNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVV 201 G G++R + V +LG + GK+T + + + T +V Sbjct: 5 KGGGDGERR------LRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIV 58 Query: 202 RMD-----NEKSFVVADIPGLIEGAAEGAGLGIRFLKHLER-----CRVLLHLIDIDPID 251 D E V + +I G G +L R + ++DI Sbjct: 59 PADVIEKIAEPLKKVIPVKLVIPGLLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGF 118 Query: 252 GTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLL------------------DKVEA 293 E ++ P + NKID + D Sbjct: 119 KPQTYEALELLKE---------RRVPFLIAANKIDRIPGWKPNPDAPFIETIRRQDPKVR 169 Query: 294 EEKAKAIAEALG-------------------WEDKYYLISAASGLGVKDLC 325 E + + E +G + +SA +G G+ +L Sbjct: 170 EILEQRVYEIVGKMYEAGLPAELFTRIKDFRRKIAIVPVSARTGEGIPELL 220 >4V6V-A1 nrPDB Length = 639 Score = 32.0 bits (71), Expect = 0.47, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 59/169 (34%), Gaps = 34/169 (20%) Query: 157 MLLADVGMLGMPNAGKSTFIRAVSAAKPKVADY----PFTT------LVPSLGVVRMDNE 206 M + ++G+L +AGK+T ++ +A+ TT L G+ Sbjct: 1 MKIINLGILAHVDAGKTTLTESLLYTSGAIAELGSVDEGTTRTDTMNLERQRGITIQTAV 60 Query: 207 KSFV-------VADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENA 259 SF + D PG ++ FL + R L ++D + ++ Sbjct: 61 TSFQWEDVKVNIIDTPGHMD-----------FLAEVYRS---LSVLDGAVL--LVSAKDG 104 Query: 260 RIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWED 308 + + ++ + P NKID + ++ + + L E Sbjct: 105 IQAQTRILFHALQIMKIPTIFFINKIDQ-EGIDLPMVYREMKAKLSSEI 152 >2YKR-W nrPDB Length = 350 Score = 32.0 bits (71), Expect = 0.49, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 72/215 (33%), Gaps = 29/215 (13%) Query: 127 NTRFKSSVNRTPRQKTN--GTPGDKRELLLELMLLADV----GMLGMPNAGKSTFIRAVS 180 + R + P N G P D+ ++ + ADV G + N + T V+ Sbjct: 18 HQRRLKTSKEKPDYDDNLFGEP-DEGIVISRFGMHADVESADGDVHRCNI-RRTIRSLVT 75 Query: 181 AAKPKVAD-YPFTTLVPSLGVVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCR 239 + P V G+V +E+ V P +G A Sbjct: 76 GDRVVWRPGKPAAEGVNVKGIVEAVHER-TSVLTRPDFYDGVKPIA----------ANID 124 Query: 240 VLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKA 299 ++ + I P + ++ + L+ +V NKIDLLD + Sbjct: 125 QIVIVSAILPELSLNIIDRYLVACETLQ--------IEPIIVLNKIDLLDDEGMAFVNEQ 176 Query: 300 IAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIE 334 + + ++S+ + G+K L + +T I Sbjct: 177 MDIYRNIGYRVLMVSSHTQDGLKPLE-EALTGRIS 210 >5VH6-A nrPDB Length = 409 Score = 31.6 bits (70), Expect = 0.52, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 64/178 (35%), Gaps = 34/178 (19%) Query: 206 EKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISE 265 + D PG ++ E + L + ++D G +P + + Sbjct: 77 GYRVNIIDTPGHVDFTVE-------VERSLRVLDGAVAVLDA--QSGVEP--QTETVWRQ 125 Query: 266 LEKYSQDLATKPRWLVFNKIDLLD----------KVEAEEKAKAIAEALGWEDKYYLISA 315 Y PR + NK+D + + + A AI +G ED + Sbjct: 126 ATTYGV-----PRIVFVNKMDKIGADFLYSVGTLRDRLQANAHAIQLPIGAEDNF----- 175 Query: 316 ASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDDEDWD 373 G+ DL +V F ++ +++ + PE+ + ++ +E + E D+E D Sbjct: 176 ---EGIIDLVENVAYFYEDDLGTRSDAKEIPEEYKEQAEELRNSLIEAVCELDEELMD 230 >4WA8-A nrPDB Length = 355 Score = 31.6 bits (70), Expect = 0.52, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 17/139 (12%) Query: 256 VENARIIISELEKY-SQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLIS 314 V N I+ + + + KP + D+LD++ E + + + A+ Y Sbjct: 189 VRNITIVGKRKHPHTGEIIEVKPEIMRLE--DVLDQLGLESREQLVDLAILLGTDYNP-D 245 Query: 315 AASGLGVKDLC-----WDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDD 369 G+G K + + + + + E P + E + + + E Sbjct: 246 GVPGIGPKRALQLIRKYGSLDELKDTDIWPKIERHLPVEPEKLRRLF-------LEPEVT 298 Query: 370 EDWDDDWDEDDEEG-VEFI 387 +D++ DWDE DEEG VEF+ Sbjct: 299 DDYELDWDEPDEEGLVEFL 317 >3CBQ-A nrPDB Length = 195 Score = 31.6 bits (70), Expect = 0.53, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 44/152 (28%), Gaps = 13/152 (8%) Query: 148 DKRELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEK 207 + + + V ++G GKST + A P + +D E+ Sbjct: 12 ENLYFQGQKDGIFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVDKEE 71 Query: 208 SFVVA-DIPGLIEGAAEGAGLGIRFLKH-LERCRVLLHLIDIDPIDGTDPVENARIIISE 265 +V DI E G H L+ L + + V + + Sbjct: 72 VTLVVYDI-------WEQGDAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVPETLLRLRA 124 Query: 266 LEKYSQDLATKPRWLVFNKIDLLDKVEAEEKA 297 + P LV NK DL E + Sbjct: 125 GRPH----HDLPVILVGNKSDLARSREVSLEE 152 >2G3Y-A nrPDB Length = 211 Score = 31.6 bits (70), Expect = 0.57, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 60/176 (34%), Gaps = 19/176 (10%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVAD----IPGL 217 V ++G GKST + ++ V+ D + ++ D L Sbjct: 40 VVLIGEQGVGKSTLANIFAGVHD--------SMDSDCEVLGEDTYERTLMVDGESATIIL 91 Query: 218 IEGAAEGAGLGIRFLKHLERC-RVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATK 276 ++ E G H + L + I + RI + Sbjct: 92 LD-MWENKGENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRAR----QTEDI 146 Query: 277 PRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFI 332 P LV NK DL+ E ++ A A+ ++ K+ SAA VK+L ++ + Sbjct: 147 PIILVGNKSDLVRCREV-SVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQV 201 >1RT8-A nrPDB Length = 513 Score = 31.6 bits (70), Expect = 0.63, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 13/29 (44%) Query: 332 IIENPVVQAEEAKQPEKVEFMWDDYHRQQ 360 + E+ + PEK+ W +YH + Sbjct: 148 LEEDETLDQFLRLPPEKILLRWFNYHLKA 176 >5JSZ-B nrPDB Length = 287 Score = 31.2 bits (69), Expect = 0.70, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 9/53 (16%) Query: 162 VGMLGMPNAGKSTF---IRAV---SAAKPKVADYPFTTLVPSLGVVRMDNEKS 208 + ++G +GKST A+ ++ K ++A Y T+ P G + + + Sbjct: 36 IALVGHTGSGKSTLMQHFNALLKPTSGKIEIAGY---TITPETGNKGLKDLRR 85 >2IW3-A nrPDB Length = 986 Score = 31.2 bits (69), Expect = 0.70, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 9/55 (16%) Query: 127 NTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVSA 181 N F+ P+ + + L + + ++G AGKST I ++ Sbjct: 676 NMEFQYPGTSKPQITD---------INFQCSLSSRIAVIGPNGAGKSTLINVLTG 721 >4Q7K-A nrPDB Length = 250 Score = 31.2 bits (69), Expect = 0.70, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 13/75 (17%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMD--NEKSFVVADIPGLIE 219 V +LG +GKST + + + P G V +D + ++ + D+ G I Sbjct: 34 VAVLGETGSGKSTLMNLIPRL-----------IDPERGRVEVDELDVRTVKLKDLRGHIS 82 Query: 220 GAAEGAGLGIRFLKH 234 + L +K Sbjct: 83 AVPQETVLFSGTIKE 97 >5CYO-A nrPDB Length = 274 Score = 31.2 bits (69), Expect = 0.84, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 22/73 (30%), Gaps = 10/73 (13%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDN----------EKSFVV 211 + ++G GKST I + +K T+ + + + V Sbjct: 7 IMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTV 66 Query: 212 ADIPGLIEGAAEG 224 D PG + Sbjct: 67 IDTPGFGDHINNE 79 >3IIK-A nrPDB Length = 180 Score = 31.2 bits (69), Expect = 0.86, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 13/21 (61%) Query: 155 ELMLLADVGMLGMPNAGKSTF 175 E MLL ++ + G P GK+T Sbjct: 7 EFMLLPNILLTGTPGVGKTTL 27 >3GP8-A nrPDB Length = 574 Score = 30.9 bits (68), Expect = 1.00, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 5/66 (7%) Query: 114 RLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKS 173 R L+A G GN + P++ G ++ +L +L V + G P GKS Sbjct: 164 RTLLATPPADGAGNDDWA-----VPKKARKGLSEEQASVLDQLAGHRLVVLTGGPGTGKS 218 Query: 174 TFIRAV 179 T +AV Sbjct: 219 TTTKAV 224 >5B3F-A nrPDB Length = 343 Score = 30.9 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 24/43 (55%) Query: 138 PRQKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS 180 PR P + RE++ L+ +G+ G +GKSTF RA+S Sbjct: 16 PRGSHMSQPENFREVIRHSPLVYLIGVAGDSGSGKSTFTRAIS 58 >1UBV-A nrPDB Length = 367 Score = 30.5 bits (67), Expect = 1.2, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%) Query: 288 LDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENP----VVQAEEA 343 +D E E AKAI +G E G L V T I +N VVQ + Sbjct: 233 IDSKEEHENAKAILLEMG-EYFQIQDDYLDCFGDPALTGAVGTDIQDNKCSWLVVQCLQR 291 Query: 344 KQPEKVEFMWDDYHRQQLEEIAE 366 PE+ + + D+Y R++ E++A+ Sbjct: 292 VTPEQRQLLEDNYGRKEPEKVAK 314 >5A5T-C nrPDB Length = 843 Score = 30.5 bits (67), Expect = 1.3, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 11/100 (11%) Query: 296 KAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDD 355 KAK+I + G Y I A + +L D N + +K+ D Sbjct: 22 KAKSIVDKEGVPRFYIRILADLEDYLNELWEDKEGKKKMNKNNAKALSTLRQKIRKYNRD 81 Query: 356 YH----------RQQLEEIAEEDDEDWDDDWDED-DEEGV 384 + Q +E AE+++ED + DED DE+GV Sbjct: 82 FESHITNYKQNPEQSADEDAEKNEEDSEGSSDEDEDEDGV 121 >2YV5-A nrPDB Length = 302 Score = 30.5 bits (67), Expect = 1.3, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 26/49 (53%) Query: 277 PRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLC 325 +VFNKIDLL++ E +E + I+ +SA +G G+ +L Sbjct: 112 EPVIVFNKIDLLNEEEKKELERWISIYRDAGYDVLKVSAKTGEGIDELV 160 Score = 30.5 bits (67), Expect = 1.4, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 3/57 (5%) Query: 164 MLGMPNAGKSTFIRAVSAAKPKVADYPFTT---LVPSLGVVRMDNEKSFVVADIPGL 217 + G GKS+ + ++ + + + T + GV + K V D PG Sbjct: 170 LAGPSGVGKSSILSRLTGEELRTQEVSEKTERGRHTTTGVRLIPFGKGSFVGDTPGF 226 >3REG-A nrPDB Length = 194 Score = 29.7 bits (65), Expect = 2.3, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 71/180 (39%), Gaps = 20/180 (11%) Query: 161 DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLG-VVRMDNEKSFV-VADIPGLI 218 + ++G GK+ + A S + A P T+ + V++ NE+ + + D G Sbjct: 25 KIVVVGDGAVGKTCLLLAFSKGEIPTAYVP--TVFENFSHVMKYKNEEFILHLWDTAG-- 80 Query: 219 EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPR 278 + +R L + + V+L ++ D + E++ Y + T Sbjct: 81 ----QEEYDRLRPLSYAD-SDVVLLCFAVNNRTSFDNISTK--WEPEIKHY---IDTAKT 130 Query: 279 WLVFNKIDLLDKVEAEEKAKAIAEALGWE---DKYYLISAASGLGVKDLCWDVMTFIIEN 335 LV K+D L K +++ K + L + Y S+ + +G+ ++ + I N Sbjct: 131 VLVGLKVD-LRKDGSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCIFSN 189 >3B5X-A nrPDB Length = 582 Score = 29.3 bits (64), Expect = 2.6, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 18/170 (10%) Query: 160 ADVGMLGMPNAGKSTFIRAVSA-----------AKPKVADYPFTTLVPSLGVVRMDNEKS 208 V ++G +GKST + V DY T L +V ++ Sbjct: 370 KTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALV---SQNV 426 Query: 209 FVVADI-PGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARII---IS 264 + D I AAEG + + + + + ++ T EN + Sbjct: 427 HLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQR 486 Query: 265 ELEKYSQDLATKPRWLVFNKIDLLDKVEAEEKAKAIAEALGWEDKYYLIS 314 + ++ L L+ ++ E+E +A + L +I+ Sbjct: 487 QRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIA 536 >4PKU-A nrPDB Length = 519 Score = 29.3 bits (64), Expect = 3.1, Method: Composition-based stats. Identities = 22/186 (11%), Positives = 60/186 (32%), Gaps = 25/186 (13%) Query: 204 DNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLH-------------------- 243 + + + D GLI+ + + ++ + ++ LLH Sbjct: 124 PYDINQRLQDTGGLIDSPSINLDVRKQYKRDIQNIDALLHQSIGSTLYNKIYLYENMNIN 183 Query: 244 ----LIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLV-FNKIDLLDKVEAEEKAK 298 + D +D TD + R I +E +K + + +V N+ LD + + + Sbjct: 184 NLTATLGADLVDSTDNTKINRGIFNEFKKNFKYSISSNYMIVDINERPALDNERLKWRIQ 243 Query: 299 AIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHR 358 + + + +G++ ++ + + + K++ + Sbjct: 244 LSPDTRAGYLENGKLILQRNIGLEIKDVQIIKQSEKEYIRIDAKVVPKSKIDTKIQEAQL 303 Query: 359 QQLEEI 364 +E Sbjct: 304 NINQEW 309 >4FIN-A nrPDB Length = 555 Score = 28.9 bits (63), Expect = 3.4, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 20/38 (52%) Query: 150 RELLLELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVA 187 + + L A +G+LG+ AGKST +R ++ + Sbjct: 23 KNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIE 60 Score = 28.5 bits (62), Expect = 5.7, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 15/26 (57%) Query: 160 ADVGMLGMPNAGKSTFIRAVSAAKPK 185 A VG++G AGKST R +S + Sbjct: 350 AIVGIIGPNGAGKSTLFRMISGQEQP 375 >5WLN-G nrPDB Length = 624 Score = 28.9 bits (63), Expect = 3.6, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 50/147 (34%), Gaps = 28/147 (19%) Query: 41 DGGDVWMEADENLNTLIDYRFEKSFRAERGQNGASRDCTGKRGKDVT--IKVPVGTRVID 98 ++ + ADE+ N L+ + A +D+ + VP +++ Sbjct: 286 RPSNILIRADESTNALVLLADPDTVNAL---------------EDIVRQLDVPRAQVLVE 330 Query: 99 QGTGETMGDMTKH-GQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELM 157 E GD+ G + + KGG G T F ++ + E Sbjct: 331 AAIVEISGDIQDAVGVQWAINKGGMGGT-KTNFANTGLSIGTLLQSLESNKAPE------ 383 Query: 158 LLADVGMLGMPNAGKSTFIRAVSAAKP 184 + D ++G G S+F V+A Sbjct: 384 SIPDGAIVG---IGSSSFGALVTALSA 407 >1PWU-A nrPDB Length = 776 Score = 28.9 bits (63), Expect = 4.2, Method: Composition-based stats. Identities = 22/186 (11%), Positives = 60/186 (32%), Gaps = 25/186 (13%) Query: 204 DNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLH-------------------- 243 + + + D GLI+ + + ++ + ++ LLH Sbjct: 385 PYDINQRLQDTGGLIDSPSINLDVRKQYKRDIQNIDALLHQSIGSTLYNKIYLYENMNIN 444 Query: 244 ----LIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLV-FNKIDLLDKVEAEEKAK 298 + D +D TD + R I +E +K + + +V N+ LD + + + Sbjct: 445 NLTATLGADLVDSTDNTKINRGIFNEFKKNFKYSISSNYMIVDINERPALDNERLKWRIQ 504 Query: 299 AIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEFMWDDYHR 358 + + + +G++ ++ + + + K++ + Sbjct: 505 LSPDTRAGYLENGKLILQRNIGLEIKDVQIIKQSEKEYIRIDAKVVPKSKIDTKIQEAQL 564 Query: 359 QQLEEI 364 +E Sbjct: 565 NINQEW 570 >3J81-k nrPDB Length = 527 Score = 28.5 bits (62), Expect = 5.6, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 4/48 (8%) Query: 273 LATKPRWLVFNKIDLLDKVEA----EEKAKAIAEALGWEDKYYLISAA 316 + K ++ NK+DL+ + A + K I + ISA Sbjct: 239 MKLKHVIILQNKVDLMREESALEHQKSILKFIRGTIADGAPIVPISAQ 286 >4V5G-AZ nrPDB Length = 406 Score = 28.2 bits (61), Expect = 6.6, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 56/174 (32%), Gaps = 33/174 (18%) Query: 154 LELMLLADVGMLGMPNAGKSTFIRAVS------AAKPKVADYPFTTLVPSLG-------- 199 + +VG +G + GK+T A++ +V DY P Sbjct: 7 VRTKPHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINT 66 Query: 200 --VVRMDNEKSFVVADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVE 257 V ++ + D PG + + + + + DG P Sbjct: 67 AHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAI---------LVVSAADGPMPQT 117 Query: 258 NARIIISELEKYSQDLATKPRWLVF-NKIDLLDKVEAEEKAKAIAEALGWEDKY 310 I+++ P +VF NK+D++D E + + L + ++ Sbjct: 118 REHILLARQVGV-------PYIVVFMNKVDMVDDPELLDLVEMEVRDLLNQYEF 164 >6C2V-A nrPDB Length = 115 Score = 28.2 bits (61), Expect = 6.9, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 24/57 (42%) Query: 162 VGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI 218 V ++G AGK+T AK +V D T+ R+ E ADI ++ Sbjct: 5 VVIVGPSGAGKTTLDELARKAKEEVPDAEIRTVTTKEDAKRVAEEAERRNADIVVIV 61 >2HF8-A nrPDB Length = 226 Score = 27.8 bits (60), Expect = 8.4, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 64/215 (29%), Gaps = 12/215 (5%) Query: 123 HGLGNTRFKSSVNRTPR-QKTNGTPGDKRELLLELMLLADVGMLGMPNAGKSTFIRAVS- 180 +G ++ K N DK LL + +G +GK+ I + Sbjct: 1 GAMGGMHLVGVLDIAKDILKANKRLADKNRKLLNKHGVVAFDFMGAIGSGKTLLIEKLID 60 Query: 181 --AAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADI-------PGLIEGAAEGAGLGIRF 231 K K+A + + V + L+ A E L Sbjct: 61 NLKDKYKIACIAGDVIAKFDAERMEKHGAKVVPLNTGKECHLDAHLVGHALEDLNLDEID 120 Query: 232 LKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLATKPRWLVFNKIDLLDKV 291 L +E L+ D D V + + + + +V NKIDL D V Sbjct: 121 LLFIENVGNLICPADFDLGTHKRIVVISTTEGDDTIEKHPGIMKTADLIVINKIDLADAV 180 Query: 292 EAEEKAKAIAEALGWED-KYYLISAASGLGVKDLC 325 A+ K D + L+S + G + Sbjct: 181 GADIKKMENDAKRINPDAEVVLLSLKTMEGFDKVL 215 >5EUM-A nrPDB Length = 258 Score = 27.8 bits (60), Expect = 8.4, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 11/53 (20%) Query: 160 ADVGMLGMPNAGKSTFIRAVSA-----------AKPKVADYPFTTLVPSLGVV 201 V ++G +GKST V+ + DY + L + VV Sbjct: 46 KTVALVGRSGSGKSTIANLVTRFYDIEQGEILLDGVNIQDYRLSNLRENCAVV 98 >5JZV-A nrPDB Length = 206 Score = 27.8 bits (60), Expect = 8.6, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 12/19 (63%) Query: 157 MLLADVGMLGMPNAGKSTF 175 MLL ++ + G P GK+T Sbjct: 35 MLLPNILLTGTPGVGKTTL 53 >1EFM-A nrPDB Length = 379 Score = 27.8 bits (60), Expect = 8.9, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 1/63 (1%) Query: 155 ELMLLADVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNE-KSFVVAD 213 +VG +G + GK+T A++ K + + V D + + D Sbjct: 7 RTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARGITINTSHVEYDTPTRHYAHVD 66 Query: 214 IPG 216 PG Sbjct: 67 CPG 69 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.129 0.339 Lambda K H 0.267 0.0390 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,997,660 Number of Sequences: 36641 Number of extensions: 646941 Number of successful extensions: 3258 Number of sequences better than 10.0: 215 Number of HSP's better than 10.0 without gapping: 133 Number of HSP's successfully gapped in prelim test: 173 Number of HSP's that attempted gapping in prelim test: 2728 Number of HSP's gapped (non-prelim): 502 length of query: 390 length of database: 10,336,785 effective HSP length: 99 effective length of query: 291 effective length of database: 6,709,326 effective search space: 1952413866 effective search space used: 1952413866 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 60 (27.8 bits)