BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P41948 (499 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5AEX-A nrPDB 1014 0.0 6EJH-A nrPDB 580 e-166 2B2H-A nrPDB 264 6e-71 3C1J-A nrPDB 204 6e-53 6EU6-A nrPDB 141 6e-34 3HD6-A nrPDB 39 0.004 3B9W-A nrPDB 35 0.080 3GC2-A nrPDB 30 1.9 >5AEX-A nrPDB Length = 505 Score = 1014 bits (2623), Expect = 0.0, Method: Compositional matrix adjust. Identities = 499/499 (100%), Positives = 499/499 (100%) Query: 1 MSYNFTGTPTGEGTGGNSLTTDLNTQFDLANMGWIGVASAGVWIMVPGIGLLYSGLSRKK 60 MSYNFTGTPTGEGTGGNSLTTDLNTQFDLANMGWIGVASAGVWIMVPGIGLLYSGLSRKK Sbjct: 1 MSYNFTGTPTGEGTGGNSLTTDLNTQFDLANMGWIGVASAGVWIMVPGIGLLYSGLSRKK 60 Query: 61 HALSLLWASMMASAVCIFQWFFWGYSLAFSHNTRGNGFIGTLEFFGFRNVLGAPSSVSSL 120 HALSLLWASMMASAVCIFQWFFWGYSLAFSHNTRGNGFIGTLEFFGFRNVLGAPSSVSSL Sbjct: 61 HALSLLWASMMASAVCIFQWFFWGYSLAFSHNTRGNGFIGTLEFFGFRNVLGAPSSVSSL 120 Query: 121 PDILFAVYQGMFAAVTGALMLGGACERARLFPMMVFLFLWMTIVYCPIACWVWNAEGWLV 180 PDILFAVYQGMFAAVTGALMLGGACERARLFPMMVFLFLWMTIVYCPIACWVWNAEGWLV Sbjct: 121 PDILFAVYQGMFAAVTGALMLGGACERARLFPMMVFLFLWMTIVYCPIACWVWNAEGWLV 180 Query: 181 KLGSLDYAGGLCVHLTSGHGGLVYALILGKRNDPVTRKGMPKYKPHSVTSVVLGTVFLWF 240 KLGSLDYAGGLCVHLTSGHGGLVYALILGKRNDPVTRKGMPKYKPHSVTSVVLGTVFLWF Sbjct: 181 KLGSLDYAGGLCVHLTSGHGGLVYALILGKRNDPVTRKGMPKYKPHSVTSVVLGTVFLWF 240 Query: 241 GWMFFNGGSAGNATIRAWYSIMSTNLAAACGGLTWMVIDYFRCGRKWTTVGLCSGIIAGL 300 GWMFFNGGSAGNATIRAWYSIMSTNLAAACGGLTWMVIDYFRCGRKWTTVGLCSGIIAGL Sbjct: 241 GWMFFNGGSAGNATIRAWYSIMSTNLAAACGGLTWMVIDYFRCGRKWTTVGLCSGIIAGL 300 Query: 301 VGITPAAGFVPIWSAVVIGVVTGAGCNLAVDLKSLLRIDDGLDCYSIHGVGGCIGSVLTG 360 VGITPAAGFVPIWSAVVIGVVTGAGCNLAVDLKSLLRIDDGLDCYSIHGVGGCIGSVLTG Sbjct: 301 VGITPAAGFVPIWSAVVIGVVTGAGCNLAVDLKSLLRIDDGLDCYSIHGVGGCIGSVLTG 360 Query: 361 IFAADYVNATAGSYISPIDGGWINHHYKQVGYQLAGICAALAWTVTVTSILLLTMNAIPF 420 IFAADYVNATAGSYISPIDGGWINHHYKQVGYQLAGICAALAWTVTVTSILLLTMNAIPF Sbjct: 361 IFAADYVNATAGSYISPIDGGWINHHYKQVGYQLAGICAALAWTVTVTSILLLTMNAIPF 420 Query: 421 LKLRLSADEEELGTDAAQIGEFTYEESTAYIPEPIRSKTSAQMPPPHENIDDKIVGNTDA 480 LKLRLSADEEELGTDAAQIGEFTYEESTAYIPEPIRSKTSAQMPPPHENIDDKIVGNTDA Sbjct: 421 LKLRLSADEEELGTDAAQIGEFTYEESTAYIPEPIRSKTSAQMPPPHENIDDKIVGNTDA 480 Query: 481 EKNSTPSDASSTKNTDHIV 499 EKNSTPSDASSTKNTDHIV Sbjct: 481 EKNSTPSDASSTKNTDHIV 499 >6EJH-A nrPDB Length = 486 Score = 580 bits (1495), Expect = e-166, Method: Compositional matrix adjust. Identities = 290/480 (60%), Positives = 365/480 (76%), Gaps = 17/480 (3%) Query: 17 NSLTTDLNTQFDLANMGWIGVASAGVWIMVPGIGLLYSGLSRKKHALSLLWASMMASAVC 76 + DLN QFD A+M WIG AS VWIM+PG+GLLYSG+SRKKHALSL+WA++MA+ V Sbjct: 13 DVFKVDLNEQFDRADMVWIGTASVLVWIMIPGVGLLYSGISRKKHALSLMWAALMAACVA 72 Query: 77 IFQWFFWGYSLAFSHNTRGNGFIGTLEFFGFRNVLGAPSSVSSLPDILFAVYQGMFAAVT 136 FQWF+WGYSL F+HN G+ F+GTL+ F ++VLGAPS V ++PDILF +YQGMFAAVT Sbjct: 73 AFQWFWWGYSLVFAHN--GSVFLGTLQNFCLKDVLGAPSIVKTVPDILFCLYQGMFAAVT 130 Query: 137 GALMLGGACERARLFPMMVFLFLWMTIVYCPIACWVWNAEGWLVKLGSLDYAGGLCVHLT 196 LM G CERARL PMMVFLF+W+T+VYCPIA W W GWLV LG+LD+AGG VH Sbjct: 131 AILMAGAGCERARLGPMMVFLFIWLTVVYCPIAYWTWGGNGWLVSLGALDFAGGGPVHEN 190 Query: 197 SGHGGLVYALILGKRNDPVTRKGMPKYKPHSVTSVVLGTVFLWFGWMFFNGGSAGNATIR 256 SG L Y+L LGKR+DPV + +PKYKPHSV+S+V+GT+FLWFGW FNGGS GN+++R Sbjct: 191 SGFAALAYSLWLGKRHDPVAKGKVPKYKPHSVSSIVMGTIFLWFGWYGFNGGSTGNSSMR 250 Query: 257 AWYSIMSTNLAAACGGLTWMVIDYFRCGRKWTTVGLCSGIIAGLVGITPAAGFVPIWSAV 316 +WY+ ++TNLAAA GGLTWM++D+FR G KW+TVGLC G IAGLVGITPAAG+VP++++V Sbjct: 251 SWYACVNTNLAAATGGLTWMLVDWFRTGGKWSTVGLCMGAIAGLVGITPAAGYVPVYTSV 310 Query: 317 VIGVVTGAGCNLAVDLKSLLRIDDGLDCYSIHGVGGCIGSVLTGIFAADYVNATAGSYIS 376 + G+V CN AVDLK LL+IDDG+D +++H VGG +G+ +TG+FAADYV G + Sbjct: 311 IFGIVPAIICNFAVDLKDLLQIDDGMDVWALHCVGGFVGNFMTGLFAADYVAMIDG---T 367 Query: 377 PIDGGWINHHYKQVGYQLAGICAALAWTVTVTSILLLTMNAIPFLKLRLSADEEELGTDA 436 IDGGW+NHH+KQ+GYQLAG CA AW+ TVTSI+LL M+ IPFL++RL DEE LGTD Sbjct: 368 EIDGGWMNHHWKQLGYQLAGSCAVAAWSFTVTSIILLAMDRIPFLRIRLHEDEEMLGTDL 427 Query: 437 AQIGEFTY-----EESTAYIPEPIRSKTSAQMPPPHENIDDKIVGNTDAEKNSTPSDASS 491 AQIGE+ Y E+ Y+ EPIRS T +Q P PH I G D N+ +A + Sbjct: 428 AQIGEYAYYADDDPETNPYVLEPIRSTTISQ-PLPH------IDGVADGSSNNDSGEAKN 480 >2B2H-A nrPDB Length = 399 Score = 264 bits (675), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 163/416 (39%), Positives = 241/416 (57%), Gaps = 32/416 (7%) Query: 31 NMGWIGVASAGVWIMVPGIGLLYSGLSRKKHALSLLWASMMASAVCIFQWFFWGYSLAFS 90 N+ WI ++A V +MVPG+G Y+G+ R+K+A++++ S ++ + + W F+GYS++F Sbjct: 5 NVAWILASTALVMLMVPGVGFFYAGMVRRKNAVNMIALSFISLIITVLLWIFYGYSVSFG 64 Query: 91 HNTRGNGFIGTLEFFGFRNVLGAPSSVSSLPDILFAVYQGMFAAVTGALMLGGACERARL 150 ++ +G IG L + V G D+LF +YQ MFAAVT A++ ERA++ Sbjct: 65 NDI--SGIIGGLNYALLSGVKG--------EDLLFMMYQMMFAAVTIAILTSAIAERAKV 114 Query: 151 FPMMVFLFLWMTIVYCPIACWVWNAEGWLVKLGSLDYAGGLCVHLTSGHGGLVYALILGK 210 ++ LW+T VY P A W+W GWL KLG+LD+AGG+ VH++SG L A+ +GK Sbjct: 115 SSFILLSALWLTFVYAPFAHWLWGG-GWLAKLGALDFAGGMVVHISSGFAALAVAMTIGK 173 Query: 211 RNDPVTRKGMPKY--KPHSVTSVVLGTVFLWFGWMFFNGGSAGNATIRAWYSIMSTNLAA 268 R G +Y +PHS+ ++G LWFGW FNGGSA A A +++ TN +A Sbjct: 174 R------AGFEEYSIEPHSIPLTLIGAALLWFGWFGFNGGSALAANDVAINAVVVTNTSA 227 Query: 269 ACGGLTWMVIDYFRCGRKWTTVGLCSGIIAGLVGITPAAGFVPIWSAVVIGVVTGAGCNL 328 A G WMVI + + K ++G+ SG IAGL ITPAAGFV + A+VIG+V G C L Sbjct: 228 AVAGFVWMVIGWIKG--KPGSLGIVSGAIAGLAAITPAAGFVDVKGAIVIGLVAGIVCYL 285 Query: 329 AVDLKSLLRIDDGLDCYSIHGVGGCIGSVLTGIFAADYVNATAGSYISPIDGGWINHHYK 388 A+D + +ID+ LD ++IHG+GG GSV GI A VN AG + + Sbjct: 286 AMDFRIKKKIDESLDAWAIHGIGGLWGSVAVGILANPEVNGYAGLLFG---------NPQ 336 Query: 389 QVGYQLAGICAALAWTVTVTSILLLTMNAIPFLKLRLSADEEELGTDAAQIGEFTY 444 + QL + + A+ VT IL ++A + LR+S+ EE +G D +Q E Y Sbjct: 337 LLVSQLIAVASTTAYAFLVTLILAKAVDAA--VGLRVSSQEEYVGLDLSQHEEVAY 390 >3C1J-A nrPDB Length = 424 Score = 204 bits (520), Expect = 6e-53, Method: Compositional matrix adjust. Identities = 147/420 (35%), Positives = 221/420 (52%), Gaps = 22/420 (5%) Query: 28 DLANMGWIGVASAGVWIM-VPGIGLLYSGLSRKKHALSLLWASMMASAVCIFQWFFWGYS 86 D A+ ++ + +A V M +PGI L Y GL R K+ LS+L + A+ W +GYS Sbjct: 6 DKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYS 65 Query: 87 LAFSHNTRGNGFIGTLEFFGFRNVLGAPSSVSSLPDILFAVYQGMFAAVTGALMLGGACE 146 LAF GN F G + + +N+ + + S+ + +QG A +T L++G E Sbjct: 66 LAFG---EGNNFFGNINWLMLKNI-ELTAVMGSIYQYIHVAFQGSAACITVGLIVGALAE 121 Query: 147 RARLFPMMVFLFLWMTIVYCPIACWVWNAEGWLVKLGSLDYAGGLCVHLTSGHGGLVYAL 206 R R +++F+ +W+T+ Y PIA VW G L G+LD+AGG VH+ + GLV A Sbjct: 122 RIRFSAVLIFVVVWLTLSYIPIAHMVWGG-GLLASHGALDFAGGTVVHINAAIAGLVGAY 180 Query: 207 ILGKRNDPVTRKGMPKYKPHSVTSVVLGTVFLWFGWMFFNGGSAGNATIRAWYSIMSTNL 266 ++GKR G +KPH++ V GT L+ GW N GSAG A A + ++T + Sbjct: 181 LIGKR----VGFGKEAFKPHNLPMVFTGTAILYIGWFGANAGSAGTANEIAALAFVNTVV 236 Query: 267 AAACGGLTWMVIDYFRCGRKWTTVGLCSGIIAGLVGITPAAGFVPIWSAVVIGVVTG-AG 325 A A L W+ ++ G+ + +G CSG IAGLVG+TPA G++ + A++IGVV G AG Sbjct: 237 ATAAAILGWIFGEWALRGKP-SLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAG 295 Query: 326 CNLAVDLKSLLRIDDGLDCYSIHGVGGCIGSVLTGIFAADYVNATAGSYISPIDGGWINH 385 LK LLR+DD D + +HGV G +G ++TGIFAA + + +G + H Sbjct: 296 LWGVTMLKRLLRVDDPCDVFGVHGVCGIVGCIMTGIFAASSLGG-----VGFAEGVTMGH 350 Query: 386 HYKQVGYQLAGICAALAWTVTVTSILLLTMNAIPFLKLRLSADEEELGTDAAQIGEFTYE 445 Q+ QL I + W+ V I + + LR+ ++E G D GE Y Sbjct: 351 ---QLLVQLESIAITIVWSGVVAFIGYKLADLT--VGLRVPEEQEREGLDVNSHGENAYN 405 >6EU6-A nrPDB Length = 405 Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 125/425 (29%), Positives = 211/425 (49%), Gaps = 34/425 (8%) Query: 24 NTQFDLANMGWIGVASAGVWIMVPGIGLLYSGLSRKKHALSLLWASMMASAVCIFQWFFW 83 N Q ++ ++ W+ +A+ V++M G +G S+ K+A+S+ +++ + + +F Sbjct: 3 NIQININHL-WVIMAACMVFLMQLGFTSYETGFSQSKNAISIALRNLVDTLISSLVFFSV 61 Query: 84 GYSLAFSHNTRGNGFIGTLEFFGFRNVLGAPSSVSSLPDILFAVYQGMFAAVTGALMLGG 143 G+ F + G IG FF ++ P+++S F +Q +FA+ ++ G Sbjct: 62 GFGFMFGKSYMG--LIGIDLFFA-NDLALHPNTLSYS----FFFFQMVFASTAATILTGA 114 Query: 144 ACERARLFPMMVFLFLWMTIVYCPIACWVW------NAEGWLVKLGSLDYAGGLCVHLTS 197 ER+ P + + I+Y W W + GWL +LG +D+AG VH Sbjct: 115 IAERSGFIPNIAGTAFIVAIIYPIFGHWAWGNLFSPDQTGWLKELGFIDFAGATVVHSIG 174 Query: 198 GHGGLVYALILGKRNDPVTRKGMP-KYKPHSVTSVVLGTVFLWFGWMFFNGGSAGNATIR 256 G + A+++G R D G + H+V LGT FLWFGW FNGGS ++ Sbjct: 175 GWFAMAAAIMVGPRIDKYNPDGSSNRIGLHNVPLATLGTFFLWFGWFGFNGGSLLRVSVN 234 Query: 257 AWYSIMSTNLAAACGGLTWMVIDYFRCGRKWTTVG-LCSGIIAGLVGITPAAGFVPIWSA 315 I++TN+AAA G++ ++ Y RK G L + I+AGLV IT ++ V SA Sbjct: 235 IGLVILNTNMAAASAGVSALIFIY--ATRKRIEAGSLFTAILAGLVAITASSNMVTPVSA 292 Query: 316 VVIGVVTGAGCNLAVD-LKSLLRIDDGLDCYSIHGVGGCIGSVLTGIFAAD-YVNATAGS 373 V IG++TG +A ++ L+IDD + ++HGVGG IG++ IFA Y+ A GS Sbjct: 293 VAIGLITGILAIIAEGFIEKTLKIDDPVSAIAVHGVGGVIGTLCVAIFAQKSYLLAENGS 352 Query: 374 YISPIDGGWINHHYKQVGYQLAGICAALAWTVTVTSILLLTMNAIPFLKLRLSADEEELG 433 Q+G Q G+ A +W+ + + L + + +LR++ +EE+ G Sbjct: 353 ------------RMHQLGIQALGVIVAFSWSFGLGMLFFLCLKKVK--RLRVTPEEEKRG 398 Query: 434 TDAAQ 438 + A+ Sbjct: 399 LNVAE 403 >3HD6-A nrPDB Length = 490 Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust. Identities = 75/299 (25%), Positives = 116/299 (38%), Gaps = 33/299 (11%) Query: 186 DYAGGLCVHLTSGHGGLVYALILGKRNDPVTRKGMPKYKPHSVTSVVLGTVFLWFGWMFF 245 D G + +H + GL IL +RN +++ + +++ GT+FLW W F Sbjct: 182 DAGGSMTIHTFGAYFGLTVTRILYRRNLEQSKERQNSVYQSDLFAMI-GTLFLWMYWPSF 240 Query: 246 N------GGSAGNATIRAWYSIMSTNLAAACGGLTWMVIDYFRCGRKWTTVGLCSGIIAG 299 N G S A I + S+ AAC + + K V + + +AG Sbjct: 241 NSAISYHGDSQHRAAINTYCSL------AACVLTSVAISSALHKKGKLDMVHIQNATLAG 294 Query: 300 LVGITPAAGFVPI-WSAVVIGVVTGAGCNLAVD-----LKSLLRIDDGLDCYSIHGVGGC 353 V + AA + + + A++IG V G L L+S L I D ++HG+ G Sbjct: 295 GVAVGTAAEMMLMPYGALIIGFVCGIISTLGFVYLTPFLESRLHIQDTCGINNLHGIPGI 354 Query: 354 IGSVLTGIFAADYVNATAGSY-------ISPIDGGWINHHYKQVGYQLAGICAALAWTVT 406 IG ++ + AA G +G W Q +Q+ G+ LA + Sbjct: 355 IGGIVGAVTAASASLEVYGKEGLVHSFDFQGFNGDWTAR--TQGKFQIYGLLVTLAMALM 412 Query: 407 VTSILLLTMNAIPFLKLRLSADEEELGTDAAQIGEFTYEESTAYIPEPIRSKTSAQMPP 465 I+ L + +PF +E DA E ST YIPE K S P Sbjct: 413 GGIIVGLILR-LPFWG---QPSDENCFEDAVY-WEMPEGNSTVYIPEDPTFKPSGPSVP 466 >3B9W-A nrPDB Length = 407 Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust. Identities = 54/209 (25%), Positives = 82/209 (39%), Gaps = 17/209 (8%) Query: 121 PDILFAVYQGMFAAVTGALMLGGACERARLFPMMVFLFLWMTIVYCPIACWVWNAEGWLV 180 P + AV FA TG + +G R R+F L L++ VY V + L Sbjct: 75 PHSVDAVIYAEFAVATGLIAMGAVLGRLRVF-QYALLALFIVPVYLLNEWLVLDNASGLT 133 Query: 181 KLGSLDYAGGLCVHLTSGHGGLVYALIL---GKRNDPVTRKGMPKYKPHSVTSVVLGTVF 237 + G D AG + +H + GL ++ L +R P+ S +LG++ Sbjct: 134 E-GFQDSAGSIAIHAFGAYFGLGVSIALTTAAQRAQPIESDAT------SDRFSMLGSMV 186 Query: 238 LWFGWMFFNGGSAGNATIRAWYSIMSTNLAAACGGL--TWMVIDYFRCGRKWTTVGLCSG 295 LW W F + + L A CG T+ + F G K + V + + Sbjct: 187 LWLFWPSF---ATAIVPFEQMPQTIVNTLLALCGATLATYFLSALFHKG-KASIVDMANA 242 Query: 296 IIAGLVGITPAAGFVPIWSAVVIGVVTGA 324 +AG V I V A VIG++ GA Sbjct: 243 ALAGGVAIGSVCNIVGPVGAFVIGLLGGA 271 >3GC2-A nrPDB Length = 323 Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 8/117 (6%) Query: 351 GGCIGSVLTGIF--AADYVNATAGSYISPIDGGWINHHYKQVGYQLAGICAALAWTVTVT 408 C + LTG+ AADY A + P D + G ++A + L V Sbjct: 90 ASCALAELTGVLPEAADYRAAPLCTG-DPDD--LVLRLADMPGEKIAKVKVGLYEAVRDG 146 Query: 409 SILLLTMNAIPFLKLRLSADEEELGTDAAQIGEFT---YEESTAYIPEPIRSKTSAQ 462 ++ L + AIP L LRL A+ A Q ++ Y A++ EP +++ ++ Sbjct: 147 MVVNLLLEAIPDLHLRLDANRAWTPLKAQQFAKYVNPDYRARIAFLEEPCKTRDDSR 203 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5AEX-A nrPDB 709 0.0 6EJH-A nrPDB 614 e-176 3C1J-A nrPDB 420 e-118 2B2H-A nrPDB 408 e-114 6EU6-A nrPDB 375 e-104 Sequences not found previously or not previously below threshold: 3B9W-A nrPDB 67 2e-11 3HD6-A nrPDB 64 1e-10 >5AEX-A nrPDB Length = 505 Score = 709 bits (1830), Expect = 0.0, Method: Composition-based stats. Identities = 499/499 (100%), Positives = 499/499 (100%) Query: 1 MSYNFTGTPTGEGTGGNSLTTDLNTQFDLANMGWIGVASAGVWIMVPGIGLLYSGLSRKK 60 MSYNFTGTPTGEGTGGNSLTTDLNTQFDLANMGWIGVASAGVWIMVPGIGLLYSGLSRKK Sbjct: 1 MSYNFTGTPTGEGTGGNSLTTDLNTQFDLANMGWIGVASAGVWIMVPGIGLLYSGLSRKK 60 Query: 61 HALSLLWASMMASAVCIFQWFFWGYSLAFSHNTRGNGFIGTLEFFGFRNVLGAPSSVSSL 120 HALSLLWASMMASAVCIFQWFFWGYSLAFSHNTRGNGFIGTLEFFGFRNVLGAPSSVSSL Sbjct: 61 HALSLLWASMMASAVCIFQWFFWGYSLAFSHNTRGNGFIGTLEFFGFRNVLGAPSSVSSL 120 Query: 121 PDILFAVYQGMFAAVTGALMLGGACERARLFPMMVFLFLWMTIVYCPIACWVWNAEGWLV 180 PDILFAVYQGMFAAVTGALMLGGACERARLFPMMVFLFLWMTIVYCPIACWVWNAEGWLV Sbjct: 121 PDILFAVYQGMFAAVTGALMLGGACERARLFPMMVFLFLWMTIVYCPIACWVWNAEGWLV 180 Query: 181 KLGSLDYAGGLCVHLTSGHGGLVYALILGKRNDPVTRKGMPKYKPHSVTSVVLGTVFLWF 240 KLGSLDYAGGLCVHLTSGHGGLVYALILGKRNDPVTRKGMPKYKPHSVTSVVLGTVFLWF Sbjct: 181 KLGSLDYAGGLCVHLTSGHGGLVYALILGKRNDPVTRKGMPKYKPHSVTSVVLGTVFLWF 240 Query: 241 GWMFFNGGSAGNATIRAWYSIMSTNLAAACGGLTWMVIDYFRCGRKWTTVGLCSGIIAGL 300 GWMFFNGGSAGNATIRAWYSIMSTNLAAACGGLTWMVIDYFRCGRKWTTVGLCSGIIAGL Sbjct: 241 GWMFFNGGSAGNATIRAWYSIMSTNLAAACGGLTWMVIDYFRCGRKWTTVGLCSGIIAGL 300 Query: 301 VGITPAAGFVPIWSAVVIGVVTGAGCNLAVDLKSLLRIDDGLDCYSIHGVGGCIGSVLTG 360 VGITPAAGFVPIWSAVVIGVVTGAGCNLAVDLKSLLRIDDGLDCYSIHGVGGCIGSVLTG Sbjct: 301 VGITPAAGFVPIWSAVVIGVVTGAGCNLAVDLKSLLRIDDGLDCYSIHGVGGCIGSVLTG 360 Query: 361 IFAADYVNATAGSYISPIDGGWINHHYKQVGYQLAGICAALAWTVTVTSILLLTMNAIPF 420 IFAADYVNATAGSYISPIDGGWINHHYKQVGYQLAGICAALAWTVTVTSILLLTMNAIPF Sbjct: 361 IFAADYVNATAGSYISPIDGGWINHHYKQVGYQLAGICAALAWTVTVTSILLLTMNAIPF 420 Query: 421 LKLRLSADEEELGTDAAQIGEFTYEESTAYIPEPIRSKTSAQMPPPHENIDDKIVGNTDA 480 LKLRLSADEEELGTDAAQIGEFTYEESTAYIPEPIRSKTSAQMPPPHENIDDKIVGNTDA Sbjct: 421 LKLRLSADEEELGTDAAQIGEFTYEESTAYIPEPIRSKTSAQMPPPHENIDDKIVGNTDA 480 Query: 481 EKNSTPSDASSTKNTDHIV 499 EKNSTPSDASSTKNTDHIV Sbjct: 481 EKNSTPSDASSTKNTDHIV 499 >6EJH-A nrPDB Length = 486 Score = 614 bits (1584), Expect = e-176, Method: Composition-based stats. Identities = 290/480 (60%), Positives = 365/480 (76%), Gaps = 17/480 (3%) Query: 17 NSLTTDLNTQFDLANMGWIGVASAGVWIMVPGIGLLYSGLSRKKHALSLLWASMMASAVC 76 + DLN QFD A+M WIG AS VWIM+PG+GLLYSG+SRKKHALSL+WA++MA+ V Sbjct: 13 DVFKVDLNEQFDRADMVWIGTASVLVWIMIPGVGLLYSGISRKKHALSLMWAALMAACVA 72 Query: 77 IFQWFFWGYSLAFSHNTRGNGFIGTLEFFGFRNVLGAPSSVSSLPDILFAVYQGMFAAVT 136 FQWF+WGYSL F+HN G+ F+GTL+ F ++VLGAPS V ++PDILF +YQGMFAAVT Sbjct: 73 AFQWFWWGYSLVFAHN--GSVFLGTLQNFCLKDVLGAPSIVKTVPDILFCLYQGMFAAVT 130 Query: 137 GALMLGGACERARLFPMMVFLFLWMTIVYCPIACWVWNAEGWLVKLGSLDYAGGLCVHLT 196 LM G CERARL PMMVFLF+W+T+VYCPIA W W GWLV LG+LD+AGG VH Sbjct: 131 AILMAGAGCERARLGPMMVFLFIWLTVVYCPIAYWTWGGNGWLVSLGALDFAGGGPVHEN 190 Query: 197 SGHGGLVYALILGKRNDPVTRKGMPKYKPHSVTSVVLGTVFLWFGWMFFNGGSAGNATIR 256 SG L Y+L LGKR+DPV + +PKYKPHSV+S+V+GT+FLWFGW FNGGS GN+++R Sbjct: 191 SGFAALAYSLWLGKRHDPVAKGKVPKYKPHSVSSIVMGTIFLWFGWYGFNGGSTGNSSMR 250 Query: 257 AWYSIMSTNLAAACGGLTWMVIDYFRCGRKWTTVGLCSGIIAGLVGITPAAGFVPIWSAV 316 +WY+ ++TNLAAA GGLTWM++D+FR G KW+TVGLC G IAGLVGITPAAG+VP++++V Sbjct: 251 SWYACVNTNLAAATGGLTWMLVDWFRTGGKWSTVGLCMGAIAGLVGITPAAGYVPVYTSV 310 Query: 317 VIGVVTGAGCNLAVDLKSLLRIDDGLDCYSIHGVGGCIGSVLTGIFAADYVNATAGSYIS 376 + G+V CN AVDLK LL+IDDG+D +++H VGG +G+ +TG+FAADYV G + Sbjct: 311 IFGIVPAIICNFAVDLKDLLQIDDGMDVWALHCVGGFVGNFMTGLFAADYVAMIDG---T 367 Query: 377 PIDGGWINHHYKQVGYQLAGICAALAWTVTVTSILLLTMNAIPFLKLRLSADEEELGTDA 436 IDGGW+NHH+KQ+GYQLAG CA AW+ TVTSI+LL M+ IPFL++RL DEE LGTD Sbjct: 368 EIDGGWMNHHWKQLGYQLAGSCAVAAWSFTVTSIILLAMDRIPFLRIRLHEDEEMLGTDL 427 Query: 437 AQIGEFTY-----EESTAYIPEPIRSKTSAQMPPPHENIDDKIVGNTDAEKNSTPSDASS 491 AQIGE+ Y E+ Y+ EPIRS T +Q P PH I G D N+ +A + Sbjct: 428 AQIGEYAYYADDDPETNPYVLEPIRSTTISQ-PLPH------IDGVADGSSNNDSGEAKN 480 >3C1J-A nrPDB Length = 424 Score = 420 bits (1079), Expect = e-118, Method: Composition-based stats. Identities = 148/420 (35%), Positives = 221/420 (52%), Gaps = 22/420 (5%) Query: 28 DLANMGWIGVASAGVWIM-VPGIGLLYSGLSRKKHALSLLWASMMASAVCIFQWFFWGYS 86 D A+ ++ + +A V M +PGI L Y GL R K+ LS+L + A+ W +GYS Sbjct: 6 DKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVLSMLTQVTVTFALVCILWVVYGYS 65 Query: 87 LAFSHNTRGNGFIGTLEFFGFRNVLGAPSSVSSLPDILFAVYQGMFAAVTGALMLGGACE 146 LAF GN F G + + +N+ + + S+ + +QG A +T L++G E Sbjct: 66 LAFG---EGNNFFGNINWLMLKNI-ELTAVMGSIYQYIHVAFQGSAACITVGLIVGALAE 121 Query: 147 RARLFPMMVFLFLWMTIVYCPIACWVWNAEGWLVKLGSLDYAGGLCVHLTSGHGGLVYAL 206 R R +++F+ +W+T+ Y PIA VW G L G+LD+AGG VH+ + GLV A Sbjct: 122 RIRFSAVLIFVVVWLTLSYIPIAHMVWGG-GLLASHGALDFAGGTVVHINAAIAGLVGAY 180 Query: 207 ILGKRNDPVTRKGMPKYKPHSVTSVVLGTVFLWFGWMFFNGGSAGNATIRAWYSIMSTNL 266 ++GKR G +KPH++ V GT L+ GW N GSAG A A + ++T + Sbjct: 181 LIGKR----VGFGKEAFKPHNLPMVFTGTAILYIGWFGANAGSAGTANEIAALAFVNTVV 236 Query: 267 AAACGGLTWMVIDYFRCGRKWTTVGLCSGIIAGLVGITPAAGFVPIWSAVVIGVVTG-AG 325 A A L W+ ++ G K + +G CSG IAGLVG+TPA G++ + A++IGVV G AG Sbjct: 237 ATAAAILGWIFGEWALRG-KPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAG 295 Query: 326 CNLAVDLKSLLRIDDGLDCYSIHGVGGCIGSVLTGIFAADYVNATAGSYISPIDGGWINH 385 LK LLR+DD D + +HGV G +G ++TGIFAA + + +G + H Sbjct: 296 LWGVTMLKRLLRVDDPCDVFGVHGVCGIVGCIMTGIFAASSLGG-----VGFAEGVTMGH 350 Query: 386 HYKQVGYQLAGICAALAWTVTVTSILLLTMNAIPFLKLRLSADEEELGTDAAQIGEFTYE 445 Q+ QL I + W+ V I + + LR+ ++E G D GE Y Sbjct: 351 ---QLLVQLESIAITIVWSGVVAFIGYKLADLT--VGLRVPEEQEREGLDVNSHGENAYN 405 >2B2H-A nrPDB Length = 399 Score = 408 bits (1048), Expect = e-114, Method: Composition-based stats. Identities = 163/416 (39%), Positives = 241/416 (57%), Gaps = 32/416 (7%) Query: 31 NMGWIGVASAGVWIMVPGIGLLYSGLSRKKHALSLLWASMMASAVCIFQWFFWGYSLAFS 90 N+ WI ++A V +MVPG+G Y+G+ R+K+A++++ S ++ + + W F+GYS++F Sbjct: 5 NVAWILASTALVMLMVPGVGFFYAGMVRRKNAVNMIALSFISLIITVLLWIFYGYSVSFG 64 Query: 91 HNTRGNGFIGTLEFFGFRNVLGAPSSVSSLPDILFAVYQGMFAAVTGALMLGGACERARL 150 ++ +G IG L + V G D+LF +YQ MFAAVT A++ ERA++ Sbjct: 65 NDI--SGIIGGLNYALLSGVKG--------EDLLFMMYQMMFAAVTIAILTSAIAERAKV 114 Query: 151 FPMMVFLFLWMTIVYCPIACWVWNAEGWLVKLGSLDYAGGLCVHLTSGHGGLVYALILGK 210 ++ LW+T VY P A W+W GWL KLG+LD+AGG+ VH++SG L A+ +GK Sbjct: 115 SSFILLSALWLTFVYAPFAHWLWGG-GWLAKLGALDFAGGMVVHISSGFAALAVAMTIGK 173 Query: 211 RNDPVTRKGMPKY--KPHSVTSVVLGTVFLWFGWMFFNGGSAGNATIRAWYSIMSTNLAA 268 R G +Y +PHS+ ++G LWFGW FNGGSA A A +++ TN +A Sbjct: 174 R------AGFEEYSIEPHSIPLTLIGAALLWFGWFGFNGGSALAANDVAINAVVVTNTSA 227 Query: 269 ACGGLTWMVIDYFRCGRKWTTVGLCSGIIAGLVGITPAAGFVPIWSAVVIGVVTGAGCNL 328 A G WMVI + + K ++G+ SG IAGL ITPAAGFV + A+VIG+V G C L Sbjct: 228 AVAGFVWMVIGWIKG--KPGSLGIVSGAIAGLAAITPAAGFVDVKGAIVIGLVAGIVCYL 285 Query: 329 AVDLKSLLRIDDGLDCYSIHGVGGCIGSVLTGIFAADYVNATAGSYISPIDGGWINHHYK 388 A+D + +ID+ LD ++IHG+GG GSV GI A VN AG + + Sbjct: 286 AMDFRIKKKIDESLDAWAIHGIGGLWGSVAVGILANPEVNGYAGLLFG---------NPQ 336 Query: 389 QVGYQLAGICAALAWTVTVTSILLLTMNAIPFLKLRLSADEEELGTDAAQIGEFTY 444 + QL + + A+ VT IL ++A + LR+S+ EE +G D +Q E Y Sbjct: 337 LLVSQLIAVASTTAYAFLVTLILAKAVDAA--VGLRVSSQEEYVGLDLSQHEEVAY 390 >6EU6-A nrPDB Length = 405 Score = 375 bits (963), Expect = e-104, Method: Composition-based stats. Identities = 125/425 (29%), Positives = 209/425 (49%), Gaps = 34/425 (8%) Query: 24 NTQFDLANMGWIGVASAGVWIMVPGIGLLYSGLSRKKHALSLLWASMMASAVCIFQWFFW 83 N Q ++ ++ W+ +A+ V++M G +G S+ K+A+S+ +++ + + +F Sbjct: 3 NIQININHL-WVIMAACMVFLMQLGFTSYETGFSQSKNAISIALRNLVDTLISSLVFFSV 61 Query: 84 GYSLAFSHNTRGNGFIGTLEFFGFRNVLGAPSSVSSLPDILFAVYQGMFAAVTGALMLGG 143 G+ F + G IG FF ++ P+++S F +Q +FA+ ++ G Sbjct: 62 GFGFMFGKSYMG--LIGIDLFFA-NDLALHPNTLSYS----FFFFQMVFASTAATILTGA 114 Query: 144 ACERARLFPMMVFLFLWMTIVYCPIACWVWN------AEGWLVKLGSLDYAGGLCVHLTS 197 ER+ P + + I+Y W W GWL +LG +D+AG VH Sbjct: 115 IAERSGFIPNIAGTAFIVAIIYPIFGHWAWGNLFSPDQTGWLKELGFIDFAGATVVHSIG 174 Query: 198 GHGGLVYALILGKRNDPVTRKGMP-KYKPHSVTSVVLGTVFLWFGWMFFNGGSAGNATIR 256 G + A+++G R D G + H+V LGT FLWFGW FNGGS ++ Sbjct: 175 GWFAMAAAIMVGPRIDKYNPDGSSNRIGLHNVPLATLGTFFLWFGWFGFNGGSLLRVSVN 234 Query: 257 AWYSIMSTNLAAACGGLTWMVIDYFRCGRKWTTVG-LCSGIIAGLVGITPAAGFVPIWSA 315 I++TN+AAA G++ ++ Y RK G L + I+AGLV IT ++ V SA Sbjct: 235 IGLVILNTNMAAASAGVSALIFIY--ATRKRIEAGSLFTAILAGLVAITASSNMVTPVSA 292 Query: 316 VVIGVVTGAGCNLAVDL-KSLLRIDDGLDCYSIHGVGGCIGSVLTGIFAAD-YVNATAGS 373 V IG++TG +A + L+IDD + ++HGVGG IG++ IFA Y+ A GS Sbjct: 293 VAIGLITGILAIIAEGFIEKTLKIDDPVSAIAVHGVGGVIGTLCVAIFAQKSYLLAENGS 352 Query: 374 YISPIDGGWINHHYKQVGYQLAGICAALAWTVTVTSILLLTMNAIPFLKLRLSADEEELG 433 Q+G Q G+ A +W+ + + L + + +LR++ +EE+ G Sbjct: 353 ------------RMHQLGIQALGVIVAFSWSFGLGMLFFLCLKKVK--RLRVTPEEEKRG 398 Query: 434 TDAAQ 438 + A+ Sbjct: 399 LNVAE 403 >3B9W-A nrPDB Length = 407 Score = 67.1 bits (162), Expect = 2e-11, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 104/273 (38%), Gaps = 17/273 (6%) Query: 56 LSRKKHALSLLWASMMASAVCIFQWFFWGYSLAFSHNTRGNGFIGTLEFFGFRNVLGAPS 115 +++ +++++L ++ + +G+S + + G Sbjct: 14 VAQYNYSINILAMLLVGFGFLMVFVRRYGFSATTGTYLVVATGLPLYILLRANGIFGHAL 73 Query: 116 SVSSLPDILFAVYQGMFAAVTGALMLGGACERARLFPMMVFLFLWMTIVYCPIACWVWNA 175 + S+ +++A FA TG + +G R R+F L L++ VY V + Sbjct: 74 TPHSVDAVIYA----EFAVATGLIAMGAVLGRLRVFQY-ALLALFIVPVYLLNEWLVLDN 128 Query: 176 EGWLVKLGSLDYAGGLCVHLTSGHGGLVYALIL---GKRNDPVTRKGMPKYKPHSVTSVV 232 L + G D AG + +H + GL ++ L +R P+ + Sbjct: 129 ASGLTE-GFQDSAGSIAIHAFGAYFGLGVSIALTTAAQRAQPIESDATSD------RFSM 181 Query: 233 LGTVFLWFGWMFFNGGSAGNATIRAWYSIMSTNLAAACGGLTWMVIDYFRCGRKWTTVGL 292 LG++ LW W F +A + +I++T LA L + K + V + Sbjct: 182 LGSMVLWLFWPSF--ATAIVPFEQMPQTIVNTLLALCGATLATYFLSALFHKGKASIVDM 239 Query: 293 CSGIIAGLVGITPAAGFVPIWSAVVIGVVTGAG 325 + +AG V I V A VIG++ GA Sbjct: 240 ANAALAGGVAIGSVCNIVGPVGAFVIGLLGGAI 272 >3HD6-A nrPDB Length = 490 Score = 64.0 bits (154), Expect = 1e-10, Method: Composition-based stats. Identities = 85/400 (21%), Positives = 149/400 (37%), Gaps = 37/400 (9%) Query: 75 VCIFQWFFWGYSLAF----SHNTRGNGFI---GTLEFFGFRNVLGAPSSVSSLPDILFAV 127 V + + +G+ + F + G F+ +++ + + + Sbjct: 71 VHVMVFVGFGFLMTFLQRYGFSAVGFNFLLAAFGIQWALLMQGWFHFLQDRYIVVGVENL 130 Query: 128 YQGMFAAVTGALMLGGACERARLFPMMVFLFLWMTIVYCPIACWVWNAEGWLVKLGSLDY 187 F + + G + +++ F +T+ + N L L D Sbjct: 131 INADFCVASVCVAFGAVLGKVSPIQLLIMTFFQVTL-------FAVNEFILLNLLKVKDA 183 Query: 188 AGGLCVHLTSGHGGLVYALILGKRNDPVTRKGMPKYKPHSVTSVVLGTVFLWFGWMFFNG 247 G + +H + GL IL +RN +++ + ++GT+FLW W FN Sbjct: 184 GGSMTIHTFGAYFGLTVTRILYRRNLEQSKERQNSVYQSDL-FAMIGTLFLWMYWPSFNS 242 Query: 248 GSA--GNATIRAWYSIMSTNLAAACGGLTWMVIDYFR-CGRKWTTVGLCSGIIAGLVGI- 303 + G++ RA ++T + A LT + I K V + + +AG V + Sbjct: 243 AISYHGDSQHRAA---INTYCSLAACVLTSVAISSALHKKGKLDMVHIQNATLAGGVAVG 299 Query: 304 TPAAGFVPIWSAVVIGVVTGAG-----CNLAVDLKSLLRIDDGLDCYSIHGVGGCIGSVL 358 T A + + A++IG V G L L+S L I D ++HG+ G IG ++ Sbjct: 300 TAAEMMLMPYGALIIGFVCGIISTLGFVYLTPFLESRLHIQDTCGINNLHGIPGIIGGIV 359 Query: 359 TGIFAAD---YVNATAGSYISPIDGGWINH--HYKQVGYQLAGICAALAWTVTVTSILLL 413 + AA V G S G+ Q +Q+ G+ LA + I+ L Sbjct: 360 GAVTAASASLEVYGKEGLVHSFDFQGFNGDWTARTQGKFQIYGLLVTLAMALMGGIIVGL 419 Query: 414 TMNAIPFLKLRLSADEEELGTDAAQIGEFTYEESTAYIPE 453 + +PF +E D A E ST YIPE Sbjct: 420 IL-RLPFWG---QPSDENCFED-AVYWEMPEGNSTVYIPE 454 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.317 0.129 0.357 Lambda K H 0.267 0.0394 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,373,282 Number of Sequences: 36641 Number of extensions: 768072 Number of successful extensions: 1876 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 1804 Number of HSP's gapped (non-prelim): 36 length of query: 499 length of database: 10,336,785 effective HSP length: 101 effective length of query: 398 effective length of database: 6,636,044 effective search space: 2641145512 effective search space used: 2641145512 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 61 (28.2 bits)