BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P41920 (201 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3M1I-B nrPDB 384 e-107 5DHA-B nrPDB 289 5e-79 1K5G-B nrPDB 157 3e-39 5CLQ-B nrPDB 142 1e-34 4L6E-A nrPDB 141 2e-34 1RRP-B nrPDB 140 3e-34 1XKE-A nrPDB 125 2e-29 3WYF-B nrPDB 61 4e-10 3OAN-A nrPDB 52 2e-07 2CRF-A nrPDB 46 1e-05 2Y8F-A nrPDB 42 2e-04 4WSF-A nrPDB 31 0.31 1EGX-A nrPDB 30 0.88 4V33-A nrPDB 29 1.5 >3M1I-B nrPDB Length = 191 Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust. Identities = 191/191 (100%), Positives = 191/191 (100%) Query: 11 DKKEEAAPKPPSSAVFSMFGGKKAEKPETKKDEEDTKEETKKEGDDAPESPDIHFEPVVH 70 DKKEEAAPKPPSSAVFSMFGGKKAEKPETKKDEEDTKEETKKEGDDAPESPDIHFEPVVH Sbjct: 1 DKKEEAAPKPPSSAVFSMFGGKKAEKPETKKDEEDTKEETKKEGDDAPESPDIHFEPVVH 60 Query: 71 LEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDK 130 LEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDK Sbjct: 61 LEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDK 120 Query: 131 TLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKEE 190 TLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKEE Sbjct: 121 TLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKEE 180 Query: 191 FEKAQEINKKA 201 FEKAQEINKKA Sbjct: 181 FEKAQEINKKA 191 >5DHA-B nrPDB Length = 143 Score = 289 bits (740), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 140/142 (98%), Positives = 140/142 (98%) Query: 60 SPDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKT 119 DIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKT Sbjct: 2 GSDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKT 61 Query: 120 NKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFG 179 NKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFG Sbjct: 62 NKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFG 121 Query: 180 SKENADKFKEEFEKAQEINKKA 201 SKENADKFKEEFEKAQEINKKA Sbjct: 122 SKENADKFKEEFEKAQEINKKA 143 >1K5G-B nrPDB Length = 201 Score = 157 bits (397), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 83/154 (53%), Positives = 106/154 (68%), Gaps = 3/154 (1%) Query: 45 DTKEETKKEGDDAPES-PDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRF--DADAK 101 DT E+ ++ ES D FEP+V L + ++KT+EEDEE L+K+RAKLFRF + D Sbjct: 6 DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLP 65 Query: 102 EWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACT 161 EWKERGTGD K LK+K+ +R+LMRRDKTLKICANH I P LKPN GSDR+WV+ Sbjct: 66 EWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNTH 125 Query: 162 ADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQ 195 AD A+ + AIRF + ENA KFK +FE+ + Sbjct: 126 ADFADECPKPELLAIRFLNAENAQKFKTKFEECR 159 >5CLQ-B nrPDB Length = 167 Score = 142 bits (357), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 75/137 (54%), Positives = 98/137 (71%), Gaps = 2/137 (1%) Query: 64 HFEPVVHL-EKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKV 122 HFEPVV L +K++VKT EEDEE + RAKLFRFD ++KEWKERG G+ K L++K + K+ Sbjct: 17 HFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKILRHKTSGKI 76 Query: 123 RILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKE 182 R+LMRR++ LKICANH I+P+ L PN GSDRS+V+ D A+ + AIRF + E Sbjct: 77 RLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWH-ALDYADELPKPEQLAIRFKTPE 135 Query: 183 NADKFKEEFEKAQEINK 199 A FK +FE+AQ I K Sbjct: 136 EAALFKCKFEEAQSILK 152 >4L6E-A nrPDB Length = 155 Score = 141 bits (355), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 70/135 (51%), Positives = 94/135 (69%), Gaps = 1/135 (0%) Query: 62 DIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNK 121 DIHFEP+V L +V+VK+ EEDEE+L+K RAKL+R+D D +WKERG GD K L + N Sbjct: 14 DIHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRWDRDVSQWKERGVGDIKILWHTMKNY 73 Query: 122 VRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSK 181 RILMRRD+ K+CANH+I LKP S+ + V+ +D A+GEA+ A+RF +K Sbjct: 74 YRILMRRDQVFKVCANHVITKTMELKPLNVSNNALVWT-ASDYADGEAKVEQLAVRFKTK 132 Query: 182 ENADKFKEEFEKAQE 196 E AD FK+ FE+ Q+ Sbjct: 133 EVADCFKKTFEECQQ 147 >1RRP-B nrPDB Length = 134 Score = 140 bits (354), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 74/135 (54%), Positives = 97/135 (71%), Gaps = 2/135 (1%) Query: 64 HFEPVVHL-EKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKV 122 HFEPVV L +K++VKT EEDEE + RAKLFRFD ++KEWKERG G+ K L++K + K+ Sbjct: 1 HFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKILRHKTSGKI 60 Query: 123 RILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKE 182 R+LMRR++ LKICANH I+P+ L PN GSDRS+V+ D A+ + AIRF + E Sbjct: 61 RLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWH-ALDYADELPKPEQLAIRFKTPE 119 Query: 183 NADKFKEEFEKAQEI 197 A FK +FE+AQ I Sbjct: 120 EAALFKCKFEEAQSI 134 >1XKE-A nrPDB Length = 130 Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 58/118 (49%), Positives = 84/118 (71%), Gaps = 1/118 (0%) Query: 80 EEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHI 139 EEDE+VLY R KLFRFDA+ +WKERG G+ K LKN+ K+R+LMRR++ LK+CANH Sbjct: 4 EEDEKVLYSQRVKLFRFDAEVSQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHW 63 Query: 140 IAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQEI 197 I LKP GSDR+W++ +D ++G+A+ A +F + E A++FK++FE+ Q + Sbjct: 64 ITTTMNLKPLSGSDRAWMW-LASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQRL 120 >3WYF-B nrPDB Length = 238 Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 7/123 (5%) Query: 69 VHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNK-KTNKVRILMR 127 + L+K +VK+ EE EE +Y+V AKL++ + WKERG G K K+K K RI+MR Sbjct: 109 LKLQKQEVKSGEESEECIYQVNAKLYQLSNIKEGWKERGVGIIKINKSKDDVEKTRIVMR 168 Query: 128 RDKTLKICANHIIAPEYTLKPN-VGSDRS--WVYACTADIAEGEAEAFTFAIRFGSKENA 184 LK+ N + +T++ GS +S ++ D A+ +AI+ G KE Sbjct: 169 SRGILKVILNIQLVKGFTVQKGFTGSLQSEKFIRLLAVDDNGDPAQ---YAIKTGKKETT 225 Query: 185 DKF 187 D+ Sbjct: 226 DEL 228 >3OAN-A nrPDB Length = 130 Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%) Query: 80 EEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNK-KTNKVRILMRRDKTLKICANH 138 EE+EEVL+ +AKL FD+D K + RG G+ K L+ K KVR+LMR + + N Sbjct: 7 EENEEVLFCEKAKLLIFDSDTKGYTSRGVGELKLLRKKDDKGKVRVLMRSEGMGHVLLNT 66 Query: 139 IIAPEYTLKP 148 + + +P Sbjct: 67 SVVKSFKYQP 76 >2CRF-A nrPDB Length = 150 Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%) Query: 71 LEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTN----KVRILM 126 LEKV+V T EE E + +++ KLF FD ++ W ERG G + T+ + R++M Sbjct: 14 LEKVEVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVM 73 Query: 127 RRDKTLKICAN 137 R +L++ N Sbjct: 74 RTQGSLRLILN 84 >2Y8F-A nrPDB Length = 138 Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 4/69 (5%) Query: 73 KVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTN----KVRILMRR 128 KV+V T EE E + +++ KLF FD ++ W ERG G + T+ + R++MR Sbjct: 4 KVEVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRT 63 Query: 129 DKTLKICAN 137 +L++ N Sbjct: 64 QGSLRLILN 72 >4WSF-A nrPDB Length = 122 Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust. Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 11/106 (10%) Query: 90 RAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPN 149 R KL+ +A+ ++W +RGTG ++ + +L+R + + I P+ + Sbjct: 7 RVKLYALNAE-RQWDDRGTGHVSSTYVERLKGISLLVRAESDGSLLLESKIQPDTAYQKQ 65 Query: 150 VGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQ 195 + W E + F A+ F K D+ E+ + Q Sbjct: 66 QDTLIVW----------SEGDNFDLALSFQEKAGCDEIWEKICQVQ 101 >1EGX-A nrPDB Length = 115 Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 45/121 (37%), Gaps = 17/121 (14%) Query: 82 DEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLK-----NKKTNKVRILMRRDKTLKICA 136 E V+ RA + +D K W GTG F + N N R++ R+ Sbjct: 2 SETVICSSRATVMLYDDGNKRWLPAGTGPQAFSRVQIYHNPTANSFRVVGRK-------- 53 Query: 137 NHIIAPEYTLKPNVGSDRSWVY-ACTADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQ 195 + P+ + N R Y T + + + + FGSKE+A +F A Sbjct: 54 ---MQPDQQVVINCAIVRGVKYNQATPNFHQWRDARQVWGLNFGSKEDAAQFAAGMASAL 110 Query: 196 E 196 E Sbjct: 111 E 111 >4V33-A nrPDB Length = 360 Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Query: 48 EETKKEGDDAPESPDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAKE 102 +ETKK+ + E I + P+ H M + ++ L +V+ K++R AD KE Sbjct: 34 QETKKQAETVQEQGKISYNPITHESTNTTIHMTDIKDTLTEVQYKIWR-TADGKE 87 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3M1I-B nrPDB 269 6e-73 5DHA-B nrPDB 211 1e-55 4L6E-A nrPDB 203 3e-53 5CLQ-B nrPDB 202 8e-53 1RRP-B nrPDB 196 4e-51 1K5G-B nrPDB 193 5e-50 1XKE-A nrPDB 176 5e-45 3WYF-B nrPDB 126 6e-30 3OAN-A nrPDB 102 8e-23 2CRF-A nrPDB 101 2e-22 2Y8F-A nrPDB 96 1e-20 Sequences not found previously or not previously below threshold: 2EC1-A nrPDB 43 7e-05 4WSF-A nrPDB 35 0.019 1EGX-A nrPDB 34 0.051 2GWN-A nrPDB 30 0.76 5GWJ-A nrPDB 29 1.9 3TB2-A nrPDB 29 2.1 5IV9-A nrPDB 28 2.5 5IV8-A nrPDB 28 2.5 5ZR1-B nrPDB 27 4.7 >3M1I-B nrPDB Length = 191 Score = 269 bits (687), Expect = 6e-73, Method: Composition-based stats. Identities = 191/191 (100%), Positives = 191/191 (100%) Query: 11 DKKEEAAPKPPSSAVFSMFGGKKAEKPETKKDEEDTKEETKKEGDDAPESPDIHFEPVVH 70 DKKEEAAPKPPSSAVFSMFGGKKAEKPETKKDEEDTKEETKKEGDDAPESPDIHFEPVVH Sbjct: 1 DKKEEAAPKPPSSAVFSMFGGKKAEKPETKKDEEDTKEETKKEGDDAPESPDIHFEPVVH 60 Query: 71 LEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDK 130 LEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDK Sbjct: 61 LEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDK 120 Query: 131 TLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKEE 190 TLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKEE Sbjct: 121 TLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKEE 180 Query: 191 FEKAQEINKKA 201 FEKAQEINKKA Sbjct: 181 FEKAQEINKKA 191 >5DHA-B nrPDB Length = 143 Score = 211 bits (538), Expect = 1e-55, Method: Composition-based stats. Identities = 140/142 (98%), Positives = 140/142 (98%) Query: 60 SPDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKT 119 DIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKT Sbjct: 2 GSDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKT 61 Query: 120 NKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFG 179 NKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFG Sbjct: 62 NKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFG 121 Query: 180 SKENADKFKEEFEKAQEINKKA 201 SKENADKFKEEFEKAQEINKKA Sbjct: 122 SKENADKFKEEFEKAQEINKKA 143 >4L6E-A nrPDB Length = 155 Score = 203 bits (517), Expect = 3e-53, Method: Composition-based stats. Identities = 71/139 (51%), Positives = 95/139 (68%), Gaps = 1/139 (0%) Query: 62 DIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNK 121 DIHFEP+V L +V+VK+ EEDEE+L+K RAKL+R+D D +WKERG GD K L + N Sbjct: 14 DIHFEPIVSLPEVEVKSGEEDEEILFKERAKLYRWDRDVSQWKERGVGDIKILWHTMKNY 73 Query: 122 VRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSK 181 RILMRRD+ K+CANH+I LKP S+ + V+ +D A+GEA+ A+RF +K Sbjct: 74 YRILMRRDQVFKVCANHVITKTMELKPLNVSNNALVWT-ASDYADGEAKVEQLAVRFKTK 132 Query: 182 ENADKFKEEFEKAQEINKK 200 E AD FK+ FE+ Q+ K Sbjct: 133 EVADCFKKTFEECQQNLMK 151 >5CLQ-B nrPDB Length = 167 Score = 202 bits (514), Expect = 8e-53, Method: Composition-based stats. Identities = 75/138 (54%), Positives = 97/138 (70%), Gaps = 2/138 (1%) Query: 63 IHFEPVVHLE-KVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNK 121 HFEPVV L K++VKT EEDEE + RAKLFRFD ++KEWKERG G+ K L++K + K Sbjct: 16 PHFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKILRHKTSGK 75 Query: 122 VRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSK 181 +R+LMRR++ LKICANH I+P+ L PN GSDRS+V+ D A+ + AIRF + Sbjct: 76 IRLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWH-ALDYADELPKPEQLAIRFKTP 134 Query: 182 ENADKFKEEFEKAQEINK 199 E A FK +FE+AQ I K Sbjct: 135 EEAALFKCKFEEAQSILK 152 >1RRP-B nrPDB Length = 134 Score = 196 bits (499), Expect = 4e-51, Method: Composition-based stats. Identities = 74/135 (54%), Positives = 96/135 (71%), Gaps = 2/135 (1%) Query: 64 HFEPVVHLE-KVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKV 122 HFEPVV L K++VKT EEDEE + RAKLFRFD ++KEWKERG G+ K L++K + K+ Sbjct: 1 HFEPVVPLPDKIEVKTGEEDEEEFFCNRAKLFRFDVESKEWKERGIGNVKILRHKTSGKI 60 Query: 123 RILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKE 182 R+LMRR++ LKICANH I+P+ L PN GSDRS+V+ D A+ + AIRF + E Sbjct: 61 RLLMRREQVLKICANHYISPDMKLTPNAGSDRSFVWH-ALDYADELPKPEQLAIRFKTPE 119 Query: 183 NADKFKEEFEKAQEI 197 A FK +FE+AQ I Sbjct: 120 EAALFKCKFEEAQSI 134 >1K5G-B nrPDB Length = 201 Score = 193 bits (490), Expect = 5e-50, Method: Composition-based stats. Identities = 83/156 (53%), Positives = 108/156 (69%), Gaps = 3/156 (1%) Query: 44 EDTKEETKKEGDDAPES-PDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRF--DADA 100 +DT E+ ++ ES D FEP+V L + ++KT+EEDEE L+K+RAKLFRF + D Sbjct: 5 KDTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDL 64 Query: 101 KEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPNVGSDRSWVYAC 160 EWKERGTGD K LK+K+ +R+LMRRDKTLKICANH I P LKPN GSDR+WV+ Sbjct: 65 PEWKERGTGDVKLLKHKEKGAIRLLMRRDKTLKICANHYITPMMELKPNAGSDRAWVWNT 124 Query: 161 TADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQE 196 AD A+ + AIRF + ENA KFK +FE+ ++ Sbjct: 125 HADFADECPKPELLAIRFLNAENAQKFKTKFEECRK 160 >1XKE-A nrPDB Length = 130 Score = 176 bits (447), Expect = 5e-45, Method: Composition-based stats. Identities = 58/121 (47%), Positives = 85/121 (70%), Gaps = 1/121 (0%) Query: 78 TMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICAN 137 + EEDE+VLY R KLFRFDA+ +WKERG G+ K LKN+ K+R+LMRR++ LK+CAN Sbjct: 2 SGEEDEKVLYSQRVKLFRFDAEVSQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCAN 61 Query: 138 HIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQEI 197 H I LKP GSDR+W++ +D ++G+A+ A +F + E A++FK++FE+ Q + Sbjct: 62 HWITTTMNLKPLSGSDRAWMW-LASDFSDGDAKLEQLAAKFKTPELAEEFKQKFEECQRL 120 Query: 198 N 198 Sbjct: 121 L 121 >3WYF-B nrPDB Length = 238 Score = 126 bits (317), Expect = 6e-30, Method: Composition-based stats. Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 15/162 (9%) Query: 33 KAEKPETKKDEEDTK---EETKKEGDDAPESPDIHFEPVVHLEKVDVKTMEEDEEVLYKV 89 ++EK T D++ E+ +D + P + L+K +VK+ EE EE +Y+V Sbjct: 75 ESEKKATDVDKDKVHSGSEQLANASEDTKDKPKP-----LKLQKQEVKSGEESEECIYQV 129 Query: 90 RAKLFRFDADAKEWKERGTGDCKFLKNK-KTNKVRILMRRDKTLKICANHIIAPEYTLKP 148 AKL++ + WKERG G K K+K K RI+MR LK+ N + +T++ Sbjct: 130 NAKLYQLSNIKEGWKERGVGIIKINKSKDDVEKTRIVMRSRGILKVILNIQLVKGFTVQK 189 Query: 149 N-VGSDRS--WVYACTADIAEGEAEAFTFAIRFGSKENADKF 187 GS +S ++ D A +AI+ G KE D+ Sbjct: 190 GFTGSLQSEKFIRLLAVDDNGDPA---QYAIKTGKKETTDEL 228 >3OAN-A nrPDB Length = 130 Score = 102 bits (255), Expect = 8e-23, Method: Composition-based stats. Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 7/120 (5%) Query: 79 MEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNK-KTNKVRILMRRDKTLKICAN 137 EE+EEVL+ +AKL FD+D K + RG G+ K L+ K KVR+LMR + + N Sbjct: 6 GEENEEVLFCEKAKLLIFDSDTKGYTSRGVGELKLLRKKDDKGKVRVLMRSEGMGHVLLN 65 Query: 138 HIIAPEYTLKPNVGSDRSWV-YACTADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQE 196 + + +P + + + + D + TF I+ K + + AQ+ Sbjct: 66 TSVVKSFKYQPIDADNENLIKWPIITD-----GKLETFIIKVKQKADGRRLVGAVADAQQ 120 >2CRF-A nrPDB Length = 150 Score = 101 bits (252), Expect = 2e-22, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 7/113 (6%) Query: 71 LEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTN----KVRILM 126 LEKV+V T EE E + +++ KLF FD ++ W ERG G + T+ + R++M Sbjct: 14 LEKVEVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVM 73 Query: 127 RRDKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFG 179 R +L++ N + + + S++S ++ D + + F + Sbjct: 74 RTQGSLRLILNTKLWAQMQIDK--ASEKS-IHITAMDTEDQGVKVFLISASSK 123 >2Y8F-A nrPDB Length = 138 Score = 96.0 bits (237), Expect = 1e-20, Method: Composition-based stats. Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 7/111 (6%) Query: 73 KVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTN----KVRILMRR 128 KV+V T EE E + +++ KLF FD ++ W ERG G + T+ + R++MR Sbjct: 4 KVEVITGEEAESNVLQMQCKLFVFDKTSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRT 63 Query: 129 DKTLKICANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFG 179 +L++ N + + + S++S + D + + F + Sbjct: 64 QGSLRLILNTKLWAQMQIDK--ASEKS-IRITAMDTEDQGVKVFLISASSK 111 >2EC1-A nrPDB Length = 125 Score = 43.2 bits (100), Expect = 7e-05, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 8/116 (6%) Query: 78 TME-EDEEVLYKVRAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDKTL-KIC 135 + E ++E+ Y + KLF E+KE+G G LK K ++L+R D L I Sbjct: 6 SGEVKEEDAFYSKKCKLFY--KKDNEFKEKGIGTLH-LKPTANQKTQLLVRADTNLGNIL 62 Query: 136 ANHIIAPEYTLKPNVGSDRSWVYACTADIAEGE--AEAFTFAIRFGSKENADKFKE 189 N +I P G + + + + T IR + E+AD+ + Sbjct: 63 LNVLIPPNMPCTR-TGKNNVLIVCVPNPPIDEKNATMPVTMLIRVKTSEDADELHK 117 >4WSF-A nrPDB Length = 122 Score = 35.1 bits (79), Expect = 0.019, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 11/106 (10%) Query: 90 RAKLFRFDADAKEWKERGTGDCKFLKNKKTNKVRILMRRDKTLKICANHIIAPEYTLKPN 149 R KL+ +A+ ++W +RGTG ++ + +L+R + + I P+ + Sbjct: 7 RVKLYALNAE-RQWDDRGTGHVSSTYVERLKGISLLVRAESDGSLLLESKIQPDTAYQKQ 65 Query: 150 VGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKFKEEFEKAQ 195 + W E + F A+ F K D+ E+ + Q Sbjct: 66 QDTLIVW----------SEGDNFDLALSFQEKAGCDEIWEKICQVQ 101 >1EGX-A nrPDB Length = 115 Score = 34.0 bits (76), Expect = 0.051, Method: Composition-based stats. Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 17/112 (15%) Query: 82 DEEVLYKVRAKLFRFDADAKEWKERGTG-----DCKFLKNKKTNKVRILMRRDKT-LKIC 135 E V+ RA + +D K W GTG + N N R++ R+ + ++ Sbjct: 2 SETVICSSRATVMLYDDGNKRWLPAGTGPQAFSRVQIYHNPTANSFRVVGRKMQPDQQVV 61 Query: 136 ANHIIAPEYTLKPNVGSDRSWVYACTADIAEGEAEAFTFAIRFGSKENADKF 187 N I + W +A + + FGSKE+A +F Sbjct: 62 INCAIVRGVKYNQATPNFHQW----------RDAR-QVWGLNFGSKEDAAQF 102 >2GWN-A nrPDB Length = 452 Score = 29.7 bits (65), Expect = 0.76, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 13/76 (17%) Query: 62 DIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFR-----------FDADAKEWKERGTGD 110 DIHF P++ E+ ++ E E+ ++ A+L F D ++R T + Sbjct: 207 DIHFHPLIRSEEACYRSSAEAVELAERMNARLHILHLSTEKELSLFRNDIPTAQKRITSE 266 Query: 111 CKF--LKNKKTNKVRI 124 L T+ R+ Sbjct: 267 VCVHHLWFSDTDYGRL 282 >5GWJ-A nrPDB Length = 803 Score = 28.6 bits (62), Expect = 1.9, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 5/60 (8%) Query: 35 EKPETKKDEEDTKEETKKEGDD--APESPDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAK 92 E E +E++T+ + D P PD ++ + L + T E+ EE++ + AK Sbjct: 690 EAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNMSLWSL---TKEKVEELIKQRDAK 746 >3TB2-A nrPDB Length = 220 Score = 28.6 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 3/53 (5%) Query: 60 SPDIHFEPVVHLEKVDVKTMEEDEEVLYKVRAKLFRFDADAKEWKERGTGDCK 112 S F PV E ++ M ED K+ KL F ++KE ++ D K Sbjct: 38 SHPNDFTPVCTTELAELGKMHED---FLKLNCKLIGFSCNSKESHDKWIEDIK 87 >5IV9-A nrPDB Length = 758 Score = 28.2 bits (61), Expect = 2.5, Method: Composition-based stats. Identities = 7/20 (35%), Positives = 13/20 (65%) Query: 53 EGDDAPESPDIHFEPVVHLE 72 ++ PE+ +HFEP ++L Sbjct: 396 SNNNMPEATRVHFEPTINLP 415 >5IV8-A nrPDB Length = 601 Score = 28.2 bits (61), Expect = 2.5, Method: Composition-based stats. Identities = 7/20 (35%), Positives = 13/20 (65%) Query: 53 EGDDAPESPDIHFEPVVHLE 72 ++ PE+ +HFEP ++L Sbjct: 239 SNNNMPEATRVHFEPTINLP 258 >5ZR1-B nrPDB Length = 620 Score = 27.4 bits (59), Expect = 4.7, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 8/76 (10%) Query: 18 PKPPSSAVFSMFGGKKAEKPET---KKDEEDTKEETKKEGDDAPESPDIHFEPVVH---- 70 PK PS A +K ++ T KKDE+DT KK D S +++ E Sbjct: 68 PKTPSKAPRKRGRPRKIQEELTDRIKKDEKDTISSKKKRKLDKDTSGNVNEESKTSNNKQ 127 Query: 71 -LEKVDVKTMEEDEEV 85 +EK +K E E++ Sbjct: 128 VMEKTGIKEKREREKI 143 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.302 0.127 0.329 Lambda K H 0.267 0.0393 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,402,047 Number of Sequences: 36641 Number of extensions: 287445 Number of successful extensions: 828 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 36 Number of HSP's that attempted gapping in prelim test: 734 Number of HSP's gapped (non-prelim): 107 length of query: 201 length of database: 10,336,785 effective HSP length: 92 effective length of query: 109 effective length of database: 6,965,813 effective search space: 759273617 effective search space used: 759273617 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.3 bits) S2: 56 (26.2 bits)