BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P41263 (196 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1IIU-A nrPDB 366 e-102 4PSQ-B nrPDB 334 1e-92 1JYJ-A nrPDB 326 3e-90 1FEM-A nrPDB 319 6e-88 2HZQ-A nrPDB 50 5e-07 4IAX-A nrPDB 39 0.001 6GQZ-A nrPDB 36 0.013 4GH7-A nrPDB 35 0.014 1GKA-B nrPDB 35 0.028 3DTQ-A nrPDB 34 0.033 2ACO-A nrPDB 34 0.035 4R0B-A nrPDB 34 0.042 3MBT-A nrPDB 34 0.042 5N48-A nrPDB 32 0.19 5MHH-A nrPDB 32 0.19 6EE5-A nrPDB 32 0.24 5N47-A nrPDB 30 0.47 2RD7-C nrPDB 30 0.57 5HGQ-A nrPDB 30 0.81 3O22-A nrPDB 29 1.2 4FDM-A nrPDB 29 1.3 1EW3-A nrPDB 29 1.3 1OBQ-A nrPDB 28 1.8 3GTN-A nrPDB 28 1.8 2K23-A nrPDB 28 2.0 5L7O-C nrPDB 28 2.6 1EPB-A nrPDB 28 2.6 1Z24-A nrPDB 28 3.0 4PZK-A nrPDB 27 5.3 1JZU-A nrPDB 27 5.9 1GM6-A nrPDB 27 7.5 3VR8-A nrPDB 26 8.5 >1IIU-A nrPDB Length = 174 Score = 366 bits (940), Expect = e-102, Method: Compositional matrix adjust. Identities = 173/173 (100%), Positives = 173/173 (100%) Query: 24 DCRVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVR 83 DCRVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVR Sbjct: 2 DCRVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVR 61 Query: 84 LFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCRE 143 LFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCRE Sbjct: 62 LFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCRE 121 Query: 144 LNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKYRVIVHNGFCS 196 LNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKYRVIVHNGFCS Sbjct: 122 LNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKYRVIVHNGFCS 174 >4PSQ-B nrPDB Length = 212 Score = 334 bits (857), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 155/183 (84%), Positives = 169/183 (92%), Gaps = 2/183 (1%) Query: 13 LAFLGSSMAERDCRVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENG 72 L F G+ ERDCRVSSF+VKENFDK R+SGTWYAMAKKDPEGLFLQDN+VA+F+VDE G Sbjct: 23 LYFQGA--MERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETG 80 Query: 73 QMSATAKGRVRLFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDY 132 QMSATAKGRVRL NNWDVCADM+G+FTDTEDPAKFKMKYWGVASFLQKGNDDHW+VDTDY Sbjct: 81 QMSATAKGRVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDY 140 Query: 133 DTYALHYSCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKYRVIVHN 192 DTYA+ YSCR LN DGTCADSYSFVFSRDP GLPPEAQKIVRQRQ +LCL R+YR+IVHN Sbjct: 141 DTYAVQYSCRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHN 200 Query: 193 GFC 195 G+C Sbjct: 201 GYC 203 >1JYJ-A nrPDB Length = 183 Score = 326 bits (836), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 150/174 (86%), Positives = 163/174 (93%) Query: 22 ERDCRVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGR 81 ERDCRVSSF+VKENFDK R+SGTWYAMAKKDPEGLFLQDN+VA+F+VDE GQMSATAKGR Sbjct: 2 ERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKGR 61 Query: 82 VRLFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSC 141 VRL NN DVCADM+G+FTDTEDPAKFKMKY GVASFLQKGNDDHW+VDTDYDTYA+ YSC Sbjct: 62 VRLLNNLDVCADMVGTFTDTEDPAKFKMKYHGVASFLQKGNDDHWIVDTDYDTYAVQYSC 121 Query: 142 RELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKYRVIVHNGFC 195 R LN DGTCADSYSFVFSRDP GLPPEAQKIVRQRQ +LCL R+YR+IVHNG+C Sbjct: 122 RLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYC 175 >1FEM-A nrPDB Length = 183 Score = 319 bits (817), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 143/174 (82%), Positives = 161/174 (92%) Query: 22 ERDCRVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGR 81 ERDCRVSSF+VKENFDK R++GTWYAMAKKDPEGLFLQDN+VA+F+VDENG MSATAKGR Sbjct: 1 ERDCRVSSFRVKENFDKARFAGTWYAMAKKDPEGLFLQDNIVAEFSVDENGHMSATAKGR 60 Query: 82 VRLFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSC 141 VRL NNWDVCADM+G+FTDTEDPAKFKMKYWGVASFLQKGNDDHW++DTDY+T+A+ YSC Sbjct: 61 VRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIIDTDYETFAVQYSC 120 Query: 142 RELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKYRVIVHNGFC 195 R LN DGTCADSYSFVF+RDP G PE QKIVRQRQ +LCL R+YR+I HNG+C Sbjct: 121 RLLNLDGTCADSYSFVFARDPSGFSPEVQKIVRQRQEELCLARQYRLIPHNGYC 174 >2HZQ-A nrPDB Length = 174 Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 27/159 (16%) Query: 32 VKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSAT-----AKGRVRLFN 86 V+ENFD N+Y G WY + +K P + A +++ ENG++ A G V Sbjct: 11 VQENFDVNKYPGRWYEI-EKIPTTFENGRCIQANYSLMENGKIKVLNQELRADGTVNQIE 69 Query: 87 NWDVCADMIGSFTDTEDPAKFKMKY-WGVASFLQKGNDDHWVVDTDYDTYALHYSCRELN 145 ++ +PAK ++K+ W + S + ++ TDY+ YAL YSC ++ Sbjct: 70 GEATPVNLT-------EPAKLEVKFSWFMPS------APYHILATDYENYALVYSCTSIS 116 Query: 146 EDGTCADSYSFVFSRDPKGLPPEA----QKIVRQRQIDL 180 + ++++ +R+ LPPE + I+ ID+ Sbjct: 117 QSFHV--DFAWILARN-VALPPETVDSLKNILTSNNIDV 152 >4IAX-A nrPDB Length = 188 Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 36/179 (20%) Query: 27 VSSFKVKENFDKNRYSGTWY-------AMAKKDPEGLFLQDNVVAQFTVDENGQMSATAK 79 +S +++NF N++ G WY A DPE L L + + E+ TA Sbjct: 13 LSKVPLQQNFQDNQFHGKWYQVGRAGNAAPPMDPELLLL---TAQTYELKEDKSYDVTA- 68 Query: 80 GRVRLFNNWDVCADMIGSFTDTEDPAKFKM----KYWGVASFLQKGNDDHWVVDTDYDTY 135 VR +C + +F + P +F + Y G+ S+ + VV T+Y+ + Sbjct: 69 --VRF--RKKMCEYLTMTFVPSPQPGEFTLGNIKNYPGLTSYFVR------VVSTNYNQH 118 Query: 136 AL-----------HYSCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLD 183 A+ ++S L A F R K L IV ID C+D Sbjct: 119 AMVFFKKVQQNREYFSISLLGRTKELASELKENFIRFSKSLGLPENHIVFPVPIDQCID 177 >6GQZ-A nrPDB Length = 174 Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust. Identities = 27/124 (21%), Positives = 53/124 (42%), Gaps = 29/124 (23%) Query: 27 VSSFKVKENFDKNRYSGTWYAMA---------KKDPEGLFLQDNVVAQFTVDENGQMSAT 77 +S +++NF N++ G WY + KDP + + + + E+ + T Sbjct: 9 LSKVPLQQNFQDNQFHGKWYVVGFAENIQQREDKDPPKM-----IATIYELKEDKSYNVT 63 Query: 78 AKGRVRLFNNWDVCADMIGSFTDTEDPAKFKM----KYWGVASFLQKGNDDHWVVDTDYD 133 + +NW+ C I +F P +F + G+ S+L + VV T+Y+ Sbjct: 64 -----NVASNWEKCTYRIKTFVPGSQPGEFTLGEIKSRPGMTSYLVR------VVSTNYN 112 Query: 134 TYAL 137 +A+ Sbjct: 113 QHAM 116 >4GH7-A nrPDB Length = 188 Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust. Identities = 46/181 (25%), Positives = 70/181 (38%), Gaps = 40/181 (22%) Query: 27 VSSFKVKENFDKNRYSGTWYAMAK---------KDPEGLFLQDNVVAQFTVDENGQMSAT 77 +S +++NF N++ G WY + K KDP + Q T+ E + + Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGKAGNHDLREDKDPRKM--------QATIYELKEDKSY 64 Query: 78 AKGRVRLFNNWDVCADMIGSFTDTEDPAKFKM---KYW-GVASFLQKGNDDHWVVDTDYD 133 VR + C I +F P +F + K W G+ S+L + VV T+Y+ Sbjct: 65 NVTNVRFVH--KKCNYRIWTFVPGSQPGEFTLGNIKSWPGLTSWLVR------VVSTNYN 116 Query: 134 TYAL-----HYSCRELNEDGTCADSYSFV------FSRDPKGLPPEAQKIVRQRQIDLCL 182 +A+ Y REL E + F R K L IV ID C+ Sbjct: 117 QHAMVFFKRVYQNRELFEITLYGRTKELTNELKENFIRFSKSLGLPENHIVFPVPIDQCI 176 Query: 183 D 183 D Sbjct: 177 D 177 >1GKA-B nrPDB Length = 174 Score = 34.7 bits (78), Expect = 0.028, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Query: 127 VVDTDYDTYALHYSCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKY 186 V++TDY+TY+ YSC + D ++ ++FVFSR P+ P +K + K+ Sbjct: 105 VIETDYETYSCVYSC--ITTDNYKSE-FAFVFSRTPQTSGPAVEKTAAVFNKNGVEFSKF 161 Query: 187 RVIVHNGFC 195 + H C Sbjct: 162 VPVSHTAEC 170 >3DTQ-A nrPDB Length = 186 Score = 34.3 bits (77), Expect = 0.033, Method: Compositional matrix adjust. Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 40/181 (22%) Query: 27 VSSFKVKENFDKNRYSGTWYAMAK---------KDPEGLFLQDNVVAQFTVDENGQMSAT 77 +S +++NF N++ G WY + + KDP+ + Q + + E+ + T Sbjct: 13 LSKVPLQQNFQDNQFHGKWYQVGRAGNAALREDKDPQKMTAQI-----YELKEDKSYNVT 67 Query: 78 AKGRVRLFNNWDVCADMIGSFTDTEDPAKFKM----KYWGVASFLQKGNDDHWVVDTDYD 133 A VR C +F P +F + Y G+ S+L + VV T+Y+ Sbjct: 68 A---VRF--RKKKCDYATMTFVPGSQPGEFTLGNIKSYPGLTSYLVR------VVSTNYN 116 Query: 134 TYAL-----------HYSCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCL 182 +A+ ++S L A F R K L IV ID C+ Sbjct: 117 QHAMVFFKKVSQNREYFSITLLGRTKELASELKENFIRFSKSLGLPENHIVFPVPIDQCI 176 Query: 183 D 183 D Sbjct: 177 D 177 >2ACO-A nrPDB Length = 173 Score = 34.3 bits (77), Expect = 0.035, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 27/49 (55%) Query: 32 VKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKG 80 V NFD RY GTWY +A+ D + V A +++ ++G ++ KG Sbjct: 26 VVNNFDAKRYLGTWYEIARFDHRFERGLEKVTATYSLRDDGGLNVINKG 74 >4R0B-A nrPDB Length = 169 Score = 33.9 bits (76), Expect = 0.042, Method: Compositional matrix adjust. Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 26/152 (17%) Query: 31 KVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNNWD- 89 + K++ + + +GTW++MA E + L + A V + + + W+ Sbjct: 4 QTKQDLELPKLAGTWHSMAMATNE-ISLMATLKAPLRVHITSLLPTPEDNLEIVLHRWEN 62 Query: 90 -VCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYAL----------- 137 C + TE+P KFK+ Y VA ++ ++DTDYD + Sbjct: 63 NSCVEKKVLGEKTENPKKFKINY-TVA-------NEATLLDTDYDNFLFLCLQDTTTPIQ 114 Query: 138 ----HYSCRELNEDGTCADSYSFVFSRDPKGL 165 Y R L ED + F P+ L Sbjct: 115 SMMCQYLARVLVEDDEIMQGFIRAFRPLPRHL 146 >3MBT-A nrPDB Length = 168 Score = 33.9 bits (76), Expect = 0.042, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 27/49 (55%) Query: 32 VKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKG 80 V NFD RY GTWY +A+ D + V A +++ ++G ++ KG Sbjct: 12 VVNNFDAKRYLGTWYEIARFDHRFERGLEKVTATYSLRDDGGLNVINKG 60 >5N48-A nrPDB Length = 188 Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust. Identities = 37/179 (20%), Positives = 67/179 (37%), Gaps = 36/179 (20%) Query: 27 VSSFKVKENFDKNRYSGTWYAMAK---------KDPEGLFLQDNVVAQFTVDENGQMSAT 77 +S +++NF N++ G WY + + KDP + V + + E+ + T Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGRAGNMRLREDKDPAKM-----VATIYELKEDKSYNVT 67 Query: 78 AKGRVRLFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYAL 137 ++ C MI +F P +F + + S + VV T+Y+ +A+ Sbjct: 68 -----KVMFQRKKCKYMINTFVPGSQPGEFTL--GAIKSPPGPTSTLVRVVSTNYNQHAM 120 Query: 138 -------------HYSCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLD 183 H + ++ T +F+ GLP IV ID C+D Sbjct: 121 VFFKHVFQNREYFHITLYGRTKELTSELKENFIRFSKSLGLP--ENHIVFPVPIDQCID 177 >5MHH-A nrPDB Length = 188 Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust. Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 29/124 (23%) Query: 27 VSSFKVKENFDKNRYSGTWYAMA---------KKDPEGLFLQDNVVAQFTVDENGQMSAT 77 +S +++NF N++ G WY + KDP+ +F + + E+ + T Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGFAGNAILREDKDPQKMF-----ATIYELKEDKSYNVT 67 Query: 78 AKGRVRLFNNWDVCADMIGSFTDTEDPAKFKM----KYWGVASFLQKGNDDHWVVDTDYD 133 + LF C I +F P +F + Y G+ S+L + VV T+Y+ Sbjct: 68 S----VLFRK-KKCDYWIRTFVPGSQPGEFTLGNIKSYPGLTSYLVR------VVSTNYN 116 Query: 134 TYAL 137 +A+ Sbjct: 117 QHAM 120 >6EE5-A nrPDB Length = 379 Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 113 GVASFLQKGNDDHWVVDTD-YDTYALHYSCRELNEDGTCADSYSFVFSRDPKGLPPE 168 G+ G D + + Y + A+H + E+NE+GT A + +F+ P +PPE Sbjct: 296 GITDLFSPGADLSGITEEKLYVSKAVHKAVLEVNEEGTEAAAATFL-EAIPMSIPPE 351 >5N47-A nrPDB Length = 188 Score = 30.4 bits (67), Expect = 0.47, Method: Compositional matrix adjust. Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 29/124 (23%) Query: 27 VSSFKVKENFDKNRYSGTWYAMAK---------KDPEGLFLQDNVVAQFTVDENGQMSAT 77 +S +++NF N++ G WY + + KDP ++ + + E+ + T Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGEAGNSLLREDKDPRKMY-----ATIYELKEDKSYNVT 67 Query: 78 AKGRVRLFNNWDVCADMIGSFTDTEDPAKFKMKYW----GVASFLQKGNDDHWVVDTDYD 133 + VR + C +I +F P +F + G SFL + VV T+Y+ Sbjct: 68 S---VRFRSK--KCHYLIRTFVPGSQPGEFTLGLIKSKPGHTSFLVR------VVSTNYN 116 Query: 134 TYAL 137 +A+ Sbjct: 117 QHAM 120 >2RD7-C nrPDB Length = 184 Score = 30.4 bits (67), Expect = 0.57, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 12/116 (10%) Query: 27 VSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQD--NVVAQFTVDENGQMSATAKGRVRL 84 +S+ + K NFD +++GTW +A FLQ+ + T+ Q +A A V Sbjct: 15 ISTIQPKANFDAQQFAGTWLLVAVGS-ACRFLQEQGHRAEATTLHVAPQGTAMA---VST 70 Query: 85 FNNWD-VCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHY 139 F D +C + + DT +F ++ +G V +TDY ++A+ Y Sbjct: 71 FRKLDGICWQVRQLYGDTGVLGRFLLQARDA-----RGAVHVVVAETDYQSFAVLY 121 >5HGQ-A nrPDB Length = 524 Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust. Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 8/112 (7%) Query: 55 GLFLQDNVVAQ-FTVDENGQMSATAK------GRVRLFNNWDVCADMIGSFTDTEDPAKF 107 G FL+ ++ F MS AK G F + V +++ ++T+ DP Sbjct: 384 GEFLEPTFISPTFLTGHPQIMSPLAKWHRSIPGLTERFELFVVTKEIVNAYTELNDPLTQ 443 Query: 108 KMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCRELNEDGTCADSYSFVFS 159 ++++ A Q G+D+ +D +Y T AL Y G D + + + Sbjct: 444 RLRFDEQAKQKQAGDDEAQNIDENYCT-ALEYGLPPTAGWGMGIDRLAMILT 494 >3O22-A nrPDB Length = 162 Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 29/121 (23%) Query: 32 VKENFDKNRYSGTWYAMA--------KKDPEGLFLQDNVVAQFTVDENGQMSATA----K 79 V+ NF ++++ G W++ ++ L + +VVA T +G ++ T+ K Sbjct: 2 VQPNFQQDKFLGRWFSAGLASNSSWLREKKAALSMAKSVVAPAT---DGGLNLTSTFLRK 58 Query: 80 GRVRLFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHY 139 + A +GS++ ++ +WG + VV+TDYD YAL Y Sbjct: 59 NQCETRTMLLQPAGSLGSYS-------YRSPHWGSTYSVS-------VVETDYDQYALLY 104 Query: 140 S 140 S Sbjct: 105 S 105 >4FDM-A nrPDB Length = 394 Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 4/62 (6%) Query: 89 DVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCRELNEDG 148 D ++ FT F KYWG +G+ + W+ D Y TY L N D Sbjct: 13 DAPIVLLHGFTGWGREEMFGFKYWGGV----RGDIEQWLNDNGYRTYTLAVGPLSSNWDR 68 Query: 149 TC 150 C Sbjct: 69 AC 70 >1EW3-A nrPDB Length = 159 Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 33/166 (19%) Query: 35 NFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNNWDV---- 90 NFD ++ SG WY+ +FL +V + ++ENG M +R +N + Sbjct: 5 NFDISKISGEWYS--------IFLASDVKEK--IEENGSMRVFV-DVIRALDNSSLYAEY 53 Query: 91 -------CADMIGSFTDTEDPAKFKMKYWGVASFL--QKGNDDHWVV-----DTDYDTYA 136 C + F TE+ + + Y G F + ND+H ++ D D Sbjct: 54 QTKVNGECTEFPMVFDKTEEDGVYSLNYDGYNVFRISEFENDEHIILYLVNFDKDRPFQL 113 Query: 137 LHYSCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCL 182 + RE D + FV +G+ E I+ +ID C Sbjct: 114 FEFYARE--PDVSPEIKEEFVKIVQKRGIVKE--NIIDLTKIDRCF 155 >1OBQ-A nrPDB Length = 181 Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust. Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 2/34 (5%) Query: 127 VVDTDYDTYALHYSCRELNEDGTCADSYSFVFSR 160 +++TDY YA YSC + N G +D +SF+FSR Sbjct: 107 ILETDYSNYACLYSCIDYNF-GYHSD-FSFIFSR 138 >3GTN-A nrPDB Length = 401 Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust. Identities = 14/49 (28%), Positives = 25/49 (51%) Query: 75 SATAKGRVRLFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGND 123 SA G + + W+ +DM+ +F D + ++KY A++ Q ND Sbjct: 72 SAVKHGAIVFASPWNPPSDMVETFNRNGDTSAKRLKYNKYAAYAQHLND 120 >2K23-A nrPDB Length = 178 Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 15/117 (12%) Query: 29 SFKVKENFDKNRYSGTWYAMA------KKDPEGLFLQDNVVAQFTVDENGQMSATAKGRV 82 S ++ F R+ G W+ + +K+ + F + + + D + +++ Sbjct: 15 SVPLQPGFWTERFQGRWFVVGLAGNAVQKERQSRFTMYSTIYELQEDNSYNVTS------ 68 Query: 83 RLFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHY 139 + C I +F + P +F + + S+ Q + D V DTDYD +A+ + Sbjct: 69 -ILVRGQGCRYWIRTFVPSSRPGQFTLG--NIHSYPQIQSYDVQVADTDYDQFAMVF 122 >5L7O-C nrPDB Length = 285 Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 5/80 (6%) Query: 23 RDCRVSSFK-VKENFDKNRYSGTWYAMAK----KDPEGLFLQDNVVAQFTVDENGQMSAT 77 R V +F+ VK N+ R T++ D +G ++D V + VD Q AT Sbjct: 118 RGGLVYTFRFVKTNYHSGRVQITFHPFVGYDDVMDSDGKIVRDEYVYRVVVDLRDQTEAT 177 Query: 78 AKGRVRLFNNWDVCADMIGS 97 + VCAD+ S Sbjct: 178 LVVPFTSLTPYKVCADVFNS 197 >1EPB-A nrPDB Length = 164 Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust. Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 14/109 (12%) Query: 32 VKENFDKNRYSGTWYAMA---KKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNNW 88 V ++FD +++ G WY +A K GL ++ + V+ + A + + Sbjct: 2 VVKDFDISKFLGFWYEIAFASKMGTPGLAHKEEKMGAMVVELKENLLALT----TTYYSE 57 Query: 89 DVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYAL 137 D C + T+ + PAKF++ G + V TDY TYA+ Sbjct: 58 DHCVLEKVTATEGDGPAKFQVTRLS-------GKKEVVVEATDYLTYAI 99 >1Z24-A nrPDB Length = 189 Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust. Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 9/128 (7%) Query: 35 NFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNNWDVCADM 94 +FD + ++G W+ +AK E +A++ D G+ ++ F + V M Sbjct: 17 DFDLSAFAGAWHEIAKLPLENENQGKCTIAEYKYD--GKKASVYNS----FVSNGVKEYM 70 Query: 95 IGSFTDTEDPAKFKM-KYWGVASFLQKG-NDDHWVVDTDYDTYALHYSCRELNEDGTCAD 152 G D K KY F Q+ N WV+ TDY YA++Y+C + + D Sbjct: 71 EGDLEIAPDAKYTKQGKYVMTFKFGQRVVNLVPWVLATDYKNYAINYNC-DYHPDKKAHS 129 Query: 153 SYSFVFSR 160 ++++ S+ Sbjct: 130 IHAWILSK 137 >4PZK-A nrPDB Length = 170 Score = 26.9 bits (58), Expect = 5.3, Method: Compositional matrix adjust. Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 16/79 (20%) Query: 108 KMKYW-GVASFLQKGNDDHWVVDTDYDT---YALHYSCRELNEDGTCADSYSFVFSRDPK 163 K+ Y+ + F +K D + T Y A YS RE Y FVF R+ Sbjct: 57 KITYYDSIEEFYEKNKDGEFFYLTKYGEKAHTAFDYSKRE--------KDYYFVFGRETN 108 Query: 164 GLPPEAQKIVRQRQIDLCL 182 GLP V + D CL Sbjct: 109 GLPAN----VIEENFDHCL 123 >1JZU-A nrPDB Length = 157 Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 4/63 (6%) Query: 113 GVASFLQKGNDDHWVVDTDYDTYALHYSCRELNEDGTCADSYSFVFSRDPKGLPPEAQKI 172 G + ++ V+DTDY +YA+ Y+ R +DG +SR P+ + P A I Sbjct: 73 GEVYYSEEAKKKVEVLDTDYKSYAVIYATR--VKDGRTLHMMRL-YSRSPE-VSPAATAI 128 Query: 173 VRQ 175 R+ Sbjct: 129 FRK 131 >1GM6-A nrPDB Length = 175 Score = 26.6 bits (57), Expect = 7.5, Method: Compositional matrix adjust. Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 11/56 (19%) Query: 32 VKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNN 87 V NFD ++ +G WY++ L D A+ ++ENG M + +R+ +N Sbjct: 9 VTSNFDASKIAGEWYSI-------LLASD---AKENIEENGSMRVFVE-HIRVLDN 53 >3VR8-A nrPDB Length = 645 Score = 26.2 bits (56), Expect = 8.5, Method: Compositional matrix adjust. Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 6/45 (13%) Query: 120 KGNDDHWVVDTDYDTYALHYSCRELNEDGTCADSYSFVFSRDPKG 164 KG+D W+ D + A+HY R E T +++ FSR P+G Sbjct: 108 KGSD--WLGDQN----AMHYLTRNAVEAVTELENFGMPFSRTPEG 146 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4PSQ-B nrPDB 314 1e-86 1JYJ-A nrPDB 303 3e-83 1FEM-A nrPDB 302 6e-83 1IIU-A nrPDB 300 2e-82 4IAX-A nrPDB 166 5e-42 2HZQ-A nrPDB 156 8e-39 Sequences not found previously or not previously below threshold: 3DTQ-A nrPDB 145 1e-35 5MHH-A nrPDB 132 1e-31 6GQZ-A nrPDB 130 4e-31 5N47-A nrPDB 127 2e-30 4GH7-A nrPDB 126 6e-30 5N48-A nrPDB 125 2e-29 4MVK-A nrPDB 122 1e-28 4MVL-A nrPDB 122 1e-28 4QAE-A nrPDB 119 1e-27 5NKN-A nrPDB 118 1e-27 5JR8-A nrPDB 104 2e-23 2K23-A nrPDB 88 2e-18 3U9P-C nrPDB 87 6e-18 1GKA-B nrPDB 57 4e-09 3O22-A nrPDB 52 1e-07 1Z24-A nrPDB 52 2e-07 2E4J-A nrPDB 50 6e-07 1N0S-A nrPDB 46 2e-05 2ACO-A nrPDB 45 2e-05 3MBT-A nrPDB 45 2e-05 5X7Y-A nrPDB 44 3e-05 1BBP-A nrPDB 44 3e-05 1OBQ-A nrPDB 43 9e-05 1EW3-A nrPDB 42 1e-04 1KXO-A nrPDB 41 2e-04 2L9C-A nrPDB 40 6e-04 3EBK-A nrPDB 37 0.007 2RD7-C nrPDB 36 0.010 3EYC-A nrPDB 35 0.023 4XMH-A nrPDB 34 0.042 3KFG-A nrPDB 33 0.071 1GM6-A nrPDB 33 0.096 3SAO-A nrPDB 33 0.10 1JZU-A nrPDB 33 0.11 5H9K-A nrPDB 32 0.16 1EPB-A nrPDB 32 0.17 3CQR-A nrPDB 32 0.17 2R73-A nrPDB 32 0.19 4K6M-A nrPDB 32 0.21 4HDG-A nrPDB 32 0.21 3GTN-A nrPDB 29 1.9 4FMV-A nrPDB 27 5.6 3KYB-A nrPDB 27 5.8 >4PSQ-B nrPDB Length = 212 Score = 314 bits (804), Expect = 1e-86, Method: Composition-based stats. Identities = 155/183 (84%), Positives = 169/183 (92%), Gaps = 2/183 (1%) Query: 13 LAFLGSSMAERDCRVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENG 72 L F G+ ERDCRVSSF+VKENFDK R+SGTWYAMAKKDPEGLFLQDN+VA+F+VDE G Sbjct: 23 LYFQGA--MERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETG 80 Query: 73 QMSATAKGRVRLFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDY 132 QMSATAKGRVRL NNWDVCADM+G+FTDTEDPAKFKMKYWGVASFLQKGNDDHW+VDTDY Sbjct: 81 QMSATAKGRVRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIVDTDY 140 Query: 133 DTYALHYSCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKYRVIVHN 192 DTYA+ YSCR LN DGTCADSYSFVFSRDP GLPPEAQKIVRQRQ +LCL R+YR+IVHN Sbjct: 141 DTYAVQYSCRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHN 200 Query: 193 GFC 195 G+C Sbjct: 201 GYC 203 >1JYJ-A nrPDB Length = 183 Score = 303 bits (776), Expect = 3e-83, Method: Composition-based stats. Identities = 150/175 (85%), Positives = 163/175 (93%) Query: 21 AERDCRVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKG 80 ERDCRVSSF+VKENFDK R+SGTWYAMAKKDPEGLFLQDN+VA+F+VDE GQMSATAKG Sbjct: 1 MERDCRVSSFRVKENFDKARFSGTWYAMAKKDPEGLFLQDNIVAEFSVDETGQMSATAKG 60 Query: 81 RVRLFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYS 140 RVRL NN DVCADM+G+FTDTEDPAKFKMKY GVASFLQKGNDDHW+VDTDYDTYA+ YS Sbjct: 61 RVRLLNNLDVCADMVGTFTDTEDPAKFKMKYHGVASFLQKGNDDHWIVDTDYDTYAVQYS 120 Query: 141 CRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKYRVIVHNGFC 195 CR LN DGTCADSYSFVFSRDP GLPPEAQKIVRQRQ +LCL R+YR+IVHNG+C Sbjct: 121 CRLLNLDGTCADSYSFVFSRDPNGLPPEAQKIVRQRQEELCLARQYRLIVHNGYC 175 >1FEM-A nrPDB Length = 183 Score = 302 bits (773), Expect = 6e-83, Method: Composition-based stats. Identities = 143/174 (82%), Positives = 161/174 (92%) Query: 22 ERDCRVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGR 81 ERDCRVSSF+VKENFDK R++GTWYAMAKKDPEGLFLQDN+VA+F+VDENG MSATAKGR Sbjct: 1 ERDCRVSSFRVKENFDKARFAGTWYAMAKKDPEGLFLQDNIVAEFSVDENGHMSATAKGR 60 Query: 82 VRLFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSC 141 VRL NNWDVCADM+G+FTDTEDPAKFKMKYWGVASFLQKGNDDHW++DTDY+T+A+ YSC Sbjct: 61 VRLLNNWDVCADMVGTFTDTEDPAKFKMKYWGVASFLQKGNDDHWIIDTDYETFAVQYSC 120 Query: 142 RELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKYRVIVHNGFC 195 R LN DGTCADSYSFVF+RDP G PE QKIVRQRQ +LCL R+YR+I HNG+C Sbjct: 121 RLLNLDGTCADSYSFVFARDPSGFSPEVQKIVRQRQEELCLARQYRLIPHNGYC 174 >1IIU-A nrPDB Length = 174 Score = 300 bits (769), Expect = 2e-82, Method: Composition-based stats. Identities = 173/173 (100%), Positives = 173/173 (100%) Query: 24 DCRVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVR 83 DCRVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVR Sbjct: 2 DCRVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVR 61 Query: 84 LFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCRE 143 LFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCRE Sbjct: 62 LFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCRE 121 Query: 144 LNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKYRVIVHNGFCS 196 LNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKYRVIVHNGFCS Sbjct: 122 LNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKYRVIVHNGFCS 174 >4IAX-A nrPDB Length = 188 Score = 166 bits (421), Expect = 5e-42, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 36/179 (20%) Query: 27 VSSFKVKENFDKNRYSGTWY-------AMAKKDPEGLFLQDNVVAQFTVDENGQMSATAK 79 +S +++NF N++ G WY A DPE L L + + E+ TA Sbjct: 13 LSKVPLQQNFQDNQFHGKWYQVGRAGNAAPPMDPELLLL---TAQTYELKEDKSYDVTA- 68 Query: 80 GRVRLFNNWDVCADMIGSFTDTEDPAKFKM----KYWGVASFLQKGNDDHWVVDTDYDTY 135 VR +C + +F + P +F + Y G+ S+ + VV T+Y+ + Sbjct: 69 --VRF--RKKMCEYLTMTFVPSPQPGEFTLGNIKNYPGLTSYFVR------VVSTNYNQH 118 Query: 136 AL-----------HYSCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLD 183 A+ ++S L A F R K L IV ID C+D Sbjct: 119 AMVFFKKVQQNREYFSISLLGRTKELASELKENFIRFSKSLGLPENHIVFPVPIDQCID 177 >2HZQ-A nrPDB Length = 174 Score = 156 bits (393), Expect = 8e-39, Method: Composition-based stats. Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 27/160 (16%) Query: 31 KVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSAT-----AKGRVRLF 85 V+ENFD N+Y G WY + +K P + A +++ ENG++ A G V Sbjct: 10 PVQENFDVNKYPGRWYEI-EKIPTTFENGRCIQANYSLMENGKIKVLNQELRADGTVNQI 68 Query: 86 NNWDVCADMIGSFTDTEDPAKFKMKY-WGVASFLQKGNDDHWVVDTDYDTYALHYSCREL 144 ++ +PAK ++K+ W + S + ++ TDY+ YAL YSC + Sbjct: 69 EGEATPVNLT-------EPAKLEVKFSWFMPS------APYHILATDYENYALVYSCTSI 115 Query: 145 NEDGTCADSYSFVFSRDPKGLPPEA----QKIVRQRQIDL 180 ++ ++++ +R+ LPPE + I+ ID+ Sbjct: 116 SQSFHV--DFAWILARN-VALPPETVDSLKNILTSNNIDV 152 >3DTQ-A nrPDB Length = 186 Score = 145 bits (366), Expect = 1e-35, Method: Composition-based stats. Identities = 42/181 (23%), Positives = 67/181 (37%), Gaps = 40/181 (22%) Query: 27 VSSFKVKENFDKNRYSGTWYAMAK---------KDPEGLFLQDNVVAQFTVDENGQMSAT 77 +S +++NF N++ G WY + + KDP Q + + E+ + T Sbjct: 13 LSKVPLQQNFQDNQFHGKWYQVGRAGNAALREDKDP-----QKMTAQIYELKEDKSYNVT 67 Query: 78 AKGRVRLFNNWDVCADMIGSFTDTEDPAKFKM----KYWGVASFLQKGNDDHWVVDTDYD 133 A VR C +F P +F + Y G+ S+L + VV T+Y+ Sbjct: 68 A---VRF--RKKKCDYATMTFVPGSQPGEFTLGNIKSYPGLTSYLVR------VVSTNYN 116 Query: 134 TYAL-----------HYSCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCL 182 +A+ ++S L A F R K L IV ID C+ Sbjct: 117 QHAMVFFKKVSQNREYFSITLLGRTKELASELKENFIRFSKSLGLPENHIVFPVPIDQCI 176 Query: 183 D 183 D Sbjct: 177 D 177 >5MHH-A nrPDB Length = 188 Score = 132 bits (331), Expect = 1e-31, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 40/181 (22%) Query: 27 VSSFKVKENFDKNRYSGTWYAMA---------KKDPEGLFLQDNVVAQFTVDENGQMSAT 77 +S +++NF N++ G WY + KDP+ +F + + E+ + T Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGFAGNAILREDKDPQKMF-----ATIYELKEDKSYNVT 67 Query: 78 AKGRVRLFNNWDVCADMIGSFTDTEDPAKFKM----KYWGVASFLQKGNDDHWVVDTDYD 133 + + C I +F P +F + Y G+ S+L + VV T+Y+ Sbjct: 68 S-----VLFRKKKCDYWIRTFVPGSQPGEFTLGNIKSYPGLTSYLVR------VVSTNYN 116 Query: 134 TYAL-----------HYSCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCL 182 +A+ +++ F R K L IV ID C+ Sbjct: 117 QHAMVFFKWVSQNREYFNITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVPIDQCI 176 Query: 183 D 183 D Sbjct: 177 D 177 >6GQZ-A nrPDB Length = 174 Score = 130 bits (326), Expect = 4e-31, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 40/181 (22%) Query: 27 VSSFKVKENFDKNRYSGTWYAMA---------KKDPEGLFLQDNVVAQFTVDENGQMSAT 77 +S +++NF N++ G WY + KDP + + + + E+ + T Sbjct: 9 LSKVPLQQNFQDNQFHGKWYVVGFAENIQQREDKDPPKM-----IATIYELKEDKSYNVT 63 Query: 78 AKGRVRLFNNWDVCADMIGSFTDTEDPAKFKM----KYWGVASFLQKGNDDHWVVDTDYD 133 + +NW+ C I +F P +F + G+ S+L + VV T+Y+ Sbjct: 64 -----NVASNWEKCTYRIKTFVPGSQPGEFTLGEIKSRPGMTSYLVR------VVSTNYN 112 Query: 134 TYALHYS-----------CRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCL 182 +A+ + F R K L IV ID C+ Sbjct: 113 QHAMVFFKTVVQNREKFWITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVPIDQCI 172 Query: 183 D 183 D Sbjct: 173 D 173 >5N47-A nrPDB Length = 188 Score = 127 bits (320), Expect = 2e-30, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 65/181 (35%), Gaps = 40/181 (22%) Query: 27 VSSFKVKENFDKNRYSGTWYAMAK---------KDPEGLFLQDNVVAQFTVDENGQMSAT 77 +S +++NF N++ G WY + + KDP ++ + + E+ + T Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGEAGNSLLREDKDPRKMY-----ATIYELKEDKSYNVT 67 Query: 78 AKGRVRLFNNWDVCADMIGSFTDTEDPAKFKMKY----WGVASFLQKGNDDHWVVDTDYD 133 + VR C +I +F P +F + G SFL + VV T+Y+ Sbjct: 68 S---VRF--RSKKCHYLIRTFVPGSQPGEFTLGLIKSKPGHTSFLVR------VVSTNYN 116 Query: 134 TYAL-----------HYSCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCL 182 +A+ ++ F R K L IV ID C+ Sbjct: 117 QHAMVFFKTVAQNREYFFITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVPIDQCI 176 Query: 183 D 183 D Sbjct: 177 D 177 >4GH7-A nrPDB Length = 188 Score = 126 bits (316), Expect = 6e-30, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 66/182 (36%), Gaps = 42/182 (23%) Query: 27 VSSFKVKENFDKNRYSGTWYAMAK---------KDPEGLFLQDNVVAQ-FTVDENGQMSA 76 +S +++NF N++ G WY + K KDP + A + + E+ + Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGKAGNHDLREDKDP------RKMQATIYELKEDKSYNV 66 Query: 77 TAKGRVRLFNNWDVCADMIGSFTDTEDPAKFKM----KYWGVASFLQKGNDDHWVVDTDY 132 T VR + C I +F P +F + + G+ S+L + VV T+Y Sbjct: 67 T---NVRFVHKK--CNYRIWTFVPGSQPGEFTLGNIKSWPGLTSWLVR------VVSTNY 115 Query: 133 DTYALHY-----------SCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLC 181 + +A+ + + F R K L IV ID C Sbjct: 116 NQHAMVFFKRVYQNRELFEITLYGRTKELTNELKENFIRFSKSLGLPENHIVFPVPIDQC 175 Query: 182 LD 183 +D Sbjct: 176 ID 177 >5N48-A nrPDB Length = 188 Score = 125 bits (313), Expect = 2e-29, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 63/181 (34%), Gaps = 40/181 (22%) Query: 27 VSSFKVKENFDKNRYSGTWYAMAK---------KDPEGLFLQDNVVAQFTVDENGQMSAT 77 +S +++NF N++ G WY + + KDP + V + + E+ + T Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGRAGNMRLREDKDPAKM-----VATIYELKEDKSYNVT 67 Query: 78 AKGRVRLFNNWDVCADMIGSFTDTEDPAKFKMKY----WGVASFLQKGNDDHWVVDTDYD 133 ++ C MI +F P +F + G S L + VV T+Y+ Sbjct: 68 -----KVMFQRKKCKYMINTFVPGSQPGEFTLGAIKSPPGPTSTLVR------VVSTNYN 116 Query: 134 TYAL-----------HYSCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCL 182 +A+ ++ F R K L IV ID C+ Sbjct: 117 QHAMVFFKHVFQNREYFHITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVPIDQCI 176 Query: 183 D 183 D Sbjct: 177 D 177 >4MVK-A nrPDB Length = 188 Score = 122 bits (305), Expect = 1e-28, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 61/181 (33%), Gaps = 40/181 (22%) Query: 27 VSSFKVKENFDKNRYSGTWYAMA---------KKDPEGLFLQDNVVAQFTVDENGQMSAT 77 +S +++NF N++ G WY + KDP ++ + + E+ + T Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGVAGNKSLREDKDPWKMY-----ATIYELKEDKSYNVT 67 Query: 78 AKGRVRLFNNWDVCADMIGSFTDTEDPAKFKM----KYWGVASFLQKGNDDHWVVDTDYD 133 + G C I +F P +F + G S L + VV T+Y+ Sbjct: 68 SVGF-----GTKKCHYKIRTFVPGSQPGEFTLGRIKSRPGRTSALVR------VVSTNYN 116 Query: 134 TYALHY-----------SCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCL 182 +A+ + + F R K L IV ID C+ Sbjct: 117 QHAMVFFKVVQQNRESFNITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVPIDQCI 176 Query: 183 D 183 D Sbjct: 177 D 177 >4MVL-A nrPDB Length = 188 Score = 122 bits (305), Expect = 1e-28, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 63/181 (34%), Gaps = 40/181 (22%) Query: 27 VSSFKVKENFDKNRYSGTWYAMA---------KKDPEGLFLQDNVVAQFTVDENGQMSAT 77 +S +++NF N++ G WY + KDP ++ + + E+ + T Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGAAGNVLLREDKDPLKMY-----ATIYELKEDKSYNVT 67 Query: 78 AKGRVRLFNNWDVCADMIGSFTDTEDPAKFKM----KYWGVASFLQKGNDDHWVVDTDYD 133 + G + C I +F P +F + G S+L + VV T+Y+ Sbjct: 68 SVGF-----DDKKCLYKIRTFVPGSQPGEFTLGRIKSEPGGTSWLVR------VVSTNYN 116 Query: 134 TYALHY-----------SCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCL 182 +A+ + + F R K L IV ID C+ Sbjct: 117 QHAMVFFKEVAQNRETFNITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVPIDQCI 176 Query: 183 D 183 D Sbjct: 177 D 177 >4QAE-A nrPDB Length = 188 Score = 119 bits (297), Expect = 1e-27, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 62/177 (35%), Gaps = 32/177 (18%) Query: 27 VSSFKVKENFDKNRYSGTWYAMA---------KKDPEGLFLQDNVVAQFTVDENGQMSAT 77 +S +++NF N++ G WY + KDP ++ + ++E+ + T Sbjct: 13 LSKVPLQQNFQDNQFHGKWYVVGLAGNEVLREDKDPMKMW-----ATIYELEEDKSYNVT 67 Query: 78 AKGRVRLFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYAL 137 + + C + +F P +F + G+ S + + VV T+Y+ +A+ Sbjct: 68 I-----VMPLAEKCEYLFQTFVPGSQPGEFTLG--GIKSGPGRTSGLVRVVSTNYNQHAM 120 Query: 138 HYS-----------CRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLD 183 + F R K L IV ID C+D Sbjct: 121 VFFKVVWQNREVFWVTLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVPIDQCID 177 >5NKN-A nrPDB Length = 174 Score = 118 bits (296), Expect = 1e-27, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 57/181 (31%), Gaps = 40/181 (22%) Query: 27 VSSFKVKENFDKNRYSGTWYAMA---------KKDPEGLFLQDNVVAQFTVDENGQMSAT 77 +S +++NF N++ G WY + KDP + + + E+ + T Sbjct: 9 LSKVPLQQNFQDNQFHGKWYVVGVAGNGFLREDKDPIKM-----AATIYELKEDKSYNVT 63 Query: 78 AKGRVRLFNNWDVCADMIGSFTDTEDPAKFKM----KYWGVASFLQKGNDDHWVVDTDYD 133 C M + P +F + G S+L + VV T+Y+ Sbjct: 64 F-----QKFPMKKCQYMTDTLVPGSQPGEFTLGNIKSEPGYTSWLVR------VVSTNYN 112 Query: 134 TYALHYS-----------CRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCL 182 +A+ + F R K L IV ID C+ Sbjct: 113 QHAMVFFKAVQQNREDFFITLYGRTKELTSELKENFIRFSKSLGLPENHIVFPVPIDQCI 172 Query: 183 D 183 D Sbjct: 173 D 173 >5JR8-A nrPDB Length = 178 Score = 104 bits (260), Expect = 2e-23, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 40/181 (22%) Query: 27 VSSFKVKENFDKNRYSGTWYAMA---------KKDPEGLFLQDNVVAQFTVDENGQMSAT 77 +SS +++NF N++ G WY + +DP+ ++ + + E+ + T Sbjct: 13 LSSVPLQQNFQDNQFQGKWYVVGLAGNAILREDEDPQKMY-----ATIYELKEDKSYNVT 67 Query: 78 AKGRVRLFNNWDVCADMIGSFTDTEDPAKFKM----KYWGVASFLQKGNDDHWVVDTDYD 133 + + D C I +F P +F + Y G+ S+L + VV T+Y+ Sbjct: 68 S-----VLFRDDGCDYWIRTFVPGCQPGEFTLGNIQSYPGLTSYLVR------VVSTNYN 116 Query: 134 TYAL-----------HYSCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCL 182 +A+ ++ F R K L IV ID C+ Sbjct: 117 QFAMVFFKKVSQNQEYFKITLYGRTKELTSELQENFIRFSKSLGLPENNIVFPVPIDQCI 176 Query: 183 D 183 D Sbjct: 177 D 177 >2K23-A nrPDB Length = 178 Score = 88.3 bits (217), Expect = 2e-18, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 63/174 (36%), Gaps = 26/174 (14%) Query: 27 VSSFKVKENFDKNRYSGTWYA------MAKKDPEGLFLQDNVVAQFTVDENGQMSATAKG 80 + S ++ F R+ G W+ +K+ + F + + + + E+ + T+ Sbjct: 13 LISVPLQPGFWTERFQGRWFVVGLAGNAVQKERQSRFTMYSTI--YELQEDNSYNVTS-- 68 Query: 81 RVRLFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYAL--- 137 + C I +F + P +F + + S+ Q + D V DTDYD +A+ Sbjct: 69 ---ILVRGQGCRYWIRTFVPSSRPGQFTLG--NIHSYPQIQSYDVQVADTDYDQFAMVFF 123 Query: 138 --------HYSCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLD 183 ++ +D F K L + IV D C+D Sbjct: 124 QKTSENKQYFKVTLYGRTKGLSDELKERFVSFAKSLGLKDNNIVFSVPTDQCID 177 >3U9P-C nrPDB Length = 182 Score = 86.8 bits (213), Expect = 6e-18, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 65/176 (36%), Gaps = 32/176 (18%) Query: 29 SFKVKENFDKNRYSGTWYA------MAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRV 82 + ++ +F +++ G WY +K EG F + + + + EN + T+ + Sbjct: 17 TVPLQPDFRSDQFRGRWYVVGLAGNAVQKKTEGSFTMYSTI--YELQENNSYNVTS---I 71 Query: 83 RLFNNWDVCADMIGSFTDTEDPAKFKM----KYWGVASFLQKGNDDHWVVDTDYDTYAL- 137 + + C I +F + +F + +Y V S+ + V TDY+ +A+ Sbjct: 72 LVRDQDQGCRYWIRTFVPSSRAGQFTLGNMHRYPQVQSYNVQ------VATTDYNQFAMV 125 Query: 138 ----------HYSCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLD 183 ++ + F+R K L + I+ D C+D Sbjct: 126 FFRKTSENKQYFKITLYGRTKELSPELKERFTRFAKSLGLKDDNIIFSVPTDQCID 181 >1GKA-B nrPDB Length = 174 Score = 57.5 bits (137), Expect = 4e-09, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 63/171 (36%), Gaps = 12/171 (7%) Query: 26 RVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQ-MSATAKGRVRL 84 + +S ++NFD RY+G WY + + + + + N T G Sbjct: 11 KCASVANQDNFDLRRYAGRWYQTHIIENAYQPVTRCIHSNYEYSTNDYGFKVTTAGF--N 68 Query: 85 FNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCREL 144 N+ + D T A + V + + V++TDY+TY+ YSC Sbjct: 69 PNDEYLKIDFKVYPTKEFPAAHMLIDAPSVFA------APYEVIETDYETYSCVYSCIT- 121 Query: 145 NEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKYRVIVHNGFC 195 ++FVFSR P+ P +K + K+ + H C Sbjct: 122 --TDNYKSEFAFVFSRTPQTSGPAVEKTAAVFNKNGVEFSKFVPVSHTAEC 170 >3O22-A nrPDB Length = 162 Score = 52.5 bits (124), Expect = 1e-07, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 48/169 (28%), Gaps = 23/169 (13%) Query: 32 VKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRL---FNNW 88 V+ NF ++++ G W++ + ++ G + L F Sbjct: 2 VQPNFQQDKFLGRWFSAGLASNSSWLREKKAALS---MAKSVVAPATDGGLNLTSTFLRK 58 Query: 89 DVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYS-------- 140 + C + + S VV+TDYD YAL YS Sbjct: 59 NQCETRTMLLQPAGSLGSYSYRSPHWGSTYSVS-----VVETDYDQYALLYSQGSKGPGE 113 Query: 141 ----CRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRK 185 + T F+ K IV Q D C+ + Sbjct: 114 DFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVFLPQTDKCMTEQ 162 >1Z24-A nrPDB Length = 189 Score = 51.7 bits (122), Expect = 2e-07, Method: Composition-based stats. Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 12/142 (8%) Query: 35 NFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNNWDVCADM 94 +FD + ++G W+ +AK E +A++ + F + V M Sbjct: 17 DFDLSAFAGAWHEIAKLPLENENQGKCTIAEY------KYDGKKASVYNSFVSNGVKEYM 70 Query: 95 IGSFTDTEDPAKFKM--KYWGVASFLQK-GNDDHWVVDTDYDTYALHYSCRELNEDGTCA 151 G D AK+ KY F Q+ N WV+ TDY YA++Y+C + D Sbjct: 71 EGDLEIAPD-AKYTKQGKYVMTFKFGQRVVNLVPWVLATDYKNYAINYNCD-YHPDKKAH 128 Query: 152 DSYSFVFSRDPKGLPPEAQKIV 173 ++++ S+ K L +++V Sbjct: 129 SIHAWILSK-SKVLEGNTKEVV 149 >2E4J-A nrPDB Length = 167 Score = 50.2 bits (118), Expect = 6e-07, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 51/166 (30%), Gaps = 23/166 (13%) Query: 32 VKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRL---FNNW 88 V+ NF ++++ G WY+ F + V ++ + +G + L F Sbjct: 8 VQPNFQQDKFLGRWYSAGLASNSSWFREKKAVL---YMCKTVVAPSTEGGLNLTSTFLRK 64 Query: 89 DVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYS-------- 140 + I P + S VV+ +YD YAL +S Sbjct: 65 NQAETKIMVLQPAGAPGHYTYSSPHSGSIHSVS-----VVEANYDEYALLFSRGTKGPGQ 119 Query: 141 ----CRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCL 182 + T D F+ K + IV Q D + Sbjct: 120 DFRMATLYSRTQTLKDELKEKFTTFSKAQGLTEEDIVFLPQPDKAI 165 >1N0S-A nrPDB Length = 184 Score = 45.5 bits (106), Expect = 2e-05, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 49/127 (38%), Gaps = 8/127 (6%) Query: 34 ENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNNWDVCAD 93 +NFD ++Y G W+ +AK A++T E + + R + + + Sbjct: 15 DNFDWSQYHGKWWEVAKYPSPNGKYGKCGWAEYT-PEGKSVKVS---RYDVIHGKEY--F 68 Query: 94 MIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCRELNEDGTCADS 153 M G+ D +K Y V+ TD Y + YSCR +ED Sbjct: 69 MEGTAYPVGD-SKIGKIYHSRTVGGYTRKTVFNVLSTDNKNYIIGYSCR-YDEDKKGHWD 126 Query: 154 YSFVFSR 160 + +V SR Sbjct: 127 HVWVLSR 133 >2ACO-A nrPDB Length = 173 Score = 45.2 bits (105), Expect = 2e-05, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 50/134 (37%), Gaps = 17/134 (12%) Query: 30 FKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNNWD 89 V NFD RY GTWY +A+ D + V A +++ ++G ++ KG W Sbjct: 24 VTVVNNFDAKRYLGTWYEIARFDHRFERGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQ 83 Query: 90 VCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYD-TYALHYSCRELNEDG 148 FT A K+ SF + V+ D + +AL D Sbjct: 84 QSEG-KAYFTGAPTRAALKV------SFFGPFYGGYNVIALDREYRHALV-----CGPDR 131 Query: 149 TCADSYSFVFSRDP 162 Y ++ SR P Sbjct: 132 ----DYLWILSRTP 141 >3MBT-A nrPDB Length = 168 Score = 44.8 bits (104), Expect = 2e-05, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 49/134 (36%), Gaps = 17/134 (12%) Query: 30 FKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNNWD 89 V NFD RY GTWY +A+ D + V A +++ ++G ++ KG W Sbjct: 10 VTVVNNFDAKRYLGTWYEIARFDHRFERGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQ 69 Query: 90 VCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYD-TYALHYSCRELNEDG 148 FT A K+ SF + V+ D + +AL Sbjct: 70 QSEG-KAYFTGAPTRAALKV------SFFGPFYGGYNVIALDREYRHALVSG-------- 114 Query: 149 TCADSYSFVFSRDP 162 Y ++ SR P Sbjct: 115 -PDRDYLWILSRTP 127 >5X7Y-A nrPDB Length = 177 Score = 44.4 bits (103), Expect = 3e-05, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 69/184 (37%), Gaps = 32/184 (17%) Query: 17 GSSMAERDCRVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSA 76 GS E D VK NFD ++ SG WY++ L ++ + ++ENG M Sbjct: 1 GSHEEENDV------VKGNFDISKISGDWYSI--------LLASDIKEK--IEENGSMRV 44 Query: 77 TAKGRVRLFNNWDV-----------CADMIGSFTDTEDPAKFKMKYWGVASF--LQKGND 123 K + + +N + C + TE ++ + + G F ++ + Sbjct: 45 FVKD-IEVLSNSSLIFTMHTKVNGKCTKISLICNKTEKDGEYDVVHDGYNLFRIIETAYE 103 Query: 124 DHWVVDTDYDTYALHYSCREL-NEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCL 182 D+ + + + EL + F R +G+ + I+ Q+D CL Sbjct: 104 DYIIFHLNNVNQEQEFQLMELYGRKPDVSPKVKEKFVRYCQGMEIPKENILDLTQVDRCL 163 Query: 183 -DRK 185 R+ Sbjct: 164 QARQ 167 >1BBP-A nrPDB Length = 173 Score = 44.4 bits (103), Expect = 3e-05, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 54/140 (38%), Gaps = 9/140 (6%) Query: 34 ENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNNWDVCAD 93 +NFD + Y G W+ +AK A++T E + + + + + Sbjct: 15 DNFDWSNYHGKWWEVAKYPNSVEKYGKCGWAEYT-PEGKSVKVS---NYHVIHGKEY--F 68 Query: 94 MIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCRELNEDGTCADS 153 + G+ D +K Y + + V+ TD Y + Y C+ +ED Sbjct: 69 IEGTAYPVGD-SKIGKIYHKLTYGGVTKENVFNVLSTDNKNYIIGYYCK-YDEDKKGHQD 126 Query: 154 YSFVFSRDPKGLPPEAQKIV 173 + +V SR K L EA+ V Sbjct: 127 FVWVLSR-SKVLTGEAKTAV 145 >1OBQ-A nrPDB Length = 181 Score = 42.9 bits (99), Expect = 9e-05, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 20/140 (14%) Query: 28 SSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENG----QMSATAKGRVR 83 + ++ ++N Y+G WY A + ++ V +++ D G + Sbjct: 18 NKLWAEQTPNRNSYAGVWYQFALTNNPYQLIEKCVRNEYSFDGKQFVIESTGIAYDGNLL 77 Query: 84 LFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCRE 143 N +P + +++TDY YA YSC + Sbjct: 78 KRNGKLYP-------NPFGEP-------HLSIDYENSFAAPLVILETDYSNYACLYSCID 123 Query: 144 LNEDGTCADSYSFVFSRDPK 163 N +SF+FSR Sbjct: 124 YNFGYH--SDFSFIFSRSAN 141 >1EW3-A nrPDB Length = 159 Score = 42.1 bits (97), Expect = 1e-04, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 59/163 (36%), Gaps = 25/163 (15%) Query: 34 ENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNNWDV--- 90 NFD ++ SG WY++ FL +V + ++ENG M +R +N + Sbjct: 4 RNFDISKISGEWYSI--------FLASDVKEK--IEENGSMRVFVD-VIRALDNSSLYAE 52 Query: 91 --------CADMIGSFTDTEDPAKFKMKYWGVASFLQK--GNDDHWVVD-TDYDTYALHY 139 C + F TE+ + + Y G F ND+H ++ ++D Sbjct: 53 YQTKVNGECTEFPMVFDKTEEDGVYSLNYDGYNVFRISEFENDEHIILYLVNFDKDRPFQ 112 Query: 140 SCRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCL 182 + + F + + + I+ +ID C Sbjct: 113 LFEFYAREPDVSPEIKEEFVKIVQKRGIVKENIIDLTKIDRCF 155 >1KXO-A nrPDB Length = 184 Score = 41.3 bits (95), Expect = 2e-04, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 42/127 (33%), Gaps = 8/127 (6%) Query: 34 ENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNNWDVCAD 93 +NFD ++Y G W+ +A A++T E + + R + + + ++ Sbjct: 15 DNFDWSQYHGKWWQVAAYPDHITKYGKCGWAEYT-PEGKSVKVS---RYSVIHGKEYFSE 70 Query: 94 MIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCRELNEDGTCADS 153 K Y V+ TD Y + Y C +ED Sbjct: 71 GTAYPVGDSKIGKI---YHSYTIGGVTQEGVFNVLSTDNKNYIIGYFCS-YDEDKKGHMD 126 Query: 154 YSFVFSR 160 +V SR Sbjct: 127 LVWVLSR 133 >2L9C-A nrPDB Length = 176 Score = 40.2 bits (92), Expect = 6e-04, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 60/178 (33%), Gaps = 38/178 (21%) Query: 26 RVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLF 85 R + ++ NF+ + +G WY + + ++E+G M + L Sbjct: 14 REEASSMERNFNVEKINGEWYTI----------MLATDKREKIEEHGSMRVFVEYIHVLE 63 Query: 86 NNWDV---------CADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYA 136 N+ + C+++ TE ++ + Y G +F ++ TDYD Y Sbjct: 64 NSLALKFHIIINEECSEIFLVADKTEKAGEYSVTYDGSNTFT--------ILKTDYDNYI 115 Query: 137 LHYSCR-----------ELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLD 183 + + + + F++ + + I+ + CL+ Sbjct: 116 MIHLINKKDGETFQLMELYGREPDLSSDIKEKFAQLSEEHGIVRENIIDLTNANRCLE 173 >3EBK-A nrPDB Length = 176 Score = 36.7 bits (83), Expect = 0.007, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 50/160 (31%), Gaps = 32/160 (20%) Query: 19 SMAERDCRVSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDE-------- 70 ++A DC + N D R+ G+W +A E L + +F+ D+ Sbjct: 4 TLANEDC-FRHESLVPNLDYERFRGSWI-IAAGTSEALTQYKCWIDRFSYDDALVSKYTD 61 Query: 71 -NGQMSATAKGRVRLFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVD 129 G+ T +GR + N KF + Y + + V+ Sbjct: 62 SQGKNRTTIRGRTKFEGN------------------KFTIDYNDKGKAF---SAPYSVLA 100 Query: 130 TDYDTYALHYSCRELNEDGTCADSYSFVFSRDPKGLPPEA 169 TDY+ YA+ C R L + Sbjct: 101 TDYENYAIVEGCPAAANGHVIYVQLRMTLRRFHPKLGDKE 140 >2RD7-C nrPDB Length = 184 Score = 35.9 bits (81), Expect = 0.010, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 15/135 (11%) Query: 27 VSSFKVKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQ-FTVDENGQMSATAKGRVRLF 85 +S+ + K NFD +++GTW +A + A+ T+ Q +A A R Sbjct: 15 ISTIQPKANFDAQQFAGTWLLVAVGSACRFLQEQGHRAEATTLHVAPQGTAMAVSTFRKL 74 Query: 86 NNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHY------ 139 + +C + + DT +F ++ + +G V +TDY ++A+ Y Sbjct: 75 DG--ICWQVRQLYGDTGVLGRFLLQ-----ARDARGAVHVVVAETDYQSFAVLYLERAGQ 127 Query: 140 -SCRELNEDGTCADS 153 S + +DS Sbjct: 128 LSVKLYARSLPVSDS 142 >3EYC-A nrPDB Length = 162 Score = 34.8 bits (78), Expect = 0.023, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 53/146 (36%), Gaps = 12/146 (8%) Query: 42 SGTWY----AMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNNWDVCADMIGS 97 SGTWY + ++ PE + L+ T E G + A + C ++ Sbjct: 10 SGTWYLKAMTVDREFPE-MNLESVTPMTLTTLEGGNLEAKVTMLIS-----GRCQEVKAV 63 Query: 98 FTDTEDPAKFKMKYWGVASFLQKGN-DDHWVVDTDYDTYAL-HYSCRELNEDGTCADSYS 155 T++P K+ +++ + + DH++ ++ + + + + D Sbjct: 64 LEKTDEPGKYTADGGKHVAYIIRSHVKDHYIFYSEGELHGKPVRGVKLVGRDPKNNLEAL 123 Query: 156 FVFSRDPKGLPPEAQKIVRQRQIDLC 181 F + + I+ RQ + C Sbjct: 124 EDFEKAAGARGLSTESILIPRQSETC 149 >4XMH-A nrPDB Length = 185 Score = 34.0 bits (76), Expect = 0.042, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 56/152 (36%), Gaps = 17/152 (11%) Query: 24 DCRVSSFKVKENFDKNRY-SGTWYAMA--KKDPEGLFLQDNVVAQFTVDENGQMSATAKG 80 +C V+ K+N DK ++ SGTWY DP+ F E+G + Sbjct: 4 ECSVNVIP-KKNLDKAKFFSGTWYETHYLDMDPQATE---KFCFSFAPRESG--GTVKEA 57 Query: 81 RVRLFNNWDVCADMIGSFTDTEDPAKFKMKYWGV---ASFLQKGNDDHWVVDTDYD---T 134 + V G+ + AK+ K+ V ++ ++ + T + Sbjct: 58 LYHFNVDSKVSFYNTGTGPLESNGAKYTAKFNTVDKKGKEIKPADEKYSYTVTVIEAAKQ 117 Query: 135 YALHYSCRELNEDGTCADSYSFVFSRDPKGLP 166 AL + C L EDG V +R+ LP Sbjct: 118 SALIHIC--LQEDGKDIGDLYSVLNRNKNALP 147 >3KFG-A nrPDB Length = 162 Score = 33.2 bits (74), Expect = 0.071, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 55/169 (32%), Gaps = 38/169 (22%) Query: 34 ENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNNWDV--- 90 +N + + +G W+++ L D + ++E+G M + L N+ Sbjct: 8 QNLNVEKINGEWFSI-------LLASD---KREKIEEHGSMRVFVEHIHVLENSLAFKFH 57 Query: 91 ------CADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCR-- 142 C+++ TE ++ + Y G +F ++ TDYD Y + + Sbjct: 58 TVIDGECSEIFLVADKTEKAGEYSVMYDGFNTFT--------ILKTDYDNYIMFHLINEK 109 Query: 143 ---------ELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCL 182 F + + + I+ + + CL Sbjct: 110 DGKTFQLMELYGRKADLNSDIKEKFVKLCEEHGIIKENIIDLTKTNRCL 158 >1GM6-A nrPDB Length = 175 Score = 32.8 bits (73), Expect = 0.096, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 65/172 (37%), Gaps = 41/172 (23%) Query: 32 VKENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNNWDV- 90 V NFD ++ +G WY++ L D A+ ++ENG M + +R+ +N + Sbjct: 9 VTSNFDASKIAGEWYSI-------LLASD---AKENIEENGSMRVFVE-HIRVLDNSSLA 57 Query: 91 ----------CADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYS 140 C D D + + Y+G F +++ +Y Y + + Sbjct: 58 FKFQRKVNGECTDFYAVCDKVGD-GVYTVAYYGENKF--------RLLEVNYSDYVILH- 107 Query: 141 CRELNEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKYRVIVHN 192 ++ +G + R P P K V ++C ++Y +I N Sbjct: 108 --LVDVNGDKTFQLMEFYGRKPDVEPKLKDKFV-----EIC--QQYGIIKEN 150 >3SAO-A nrPDB Length = 160 Score = 32.8 bits (73), Expect = 0.10, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 56/172 (32%), Gaps = 35/172 (20%) Query: 37 DKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNNWDV------ 90 D++ +G WY +A FL E G+M R+ ++ Sbjct: 4 DRSEVAGKWYIVALASNTDFFLA----------EKGKMKMVM-ARISFLGEDELEVSYAA 52 Query: 91 -----CADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCREL- 144 C +F T D + + ++ V+DTDY +YA+ ++ R Sbjct: 53 PSPKGCRKWETTFKKTSDDGEV--------YYSEEAEKTVEVLDTDYKSYAVIFATRVKD 104 Query: 145 NEDGTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLCLDRKYRVIVHNGFCS 196 YS P + +K+ R+R D V+ CS Sbjct: 105 GRTLHMMRLYSRSREVSPTAMAI-FRKLARERNY---TDEMVAVLPSQAACS 152 >1JZU-A nrPDB Length = 157 Score = 32.8 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 46/131 (35%), Gaps = 31/131 (23%) Query: 37 DKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNNWDV------ 90 D++ +G WY +A L N +F + E +M A R+ ++ Sbjct: 5 DRSEIAGKWYVVA--------LASNT--EFFLREKDKMK-MAMARISFLGEDELKVSYAV 53 Query: 91 -----CADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYALHYSCREL- 144 C +F T D + + ++ V+DTDY +YA+ Y+ R Sbjct: 54 PKPNGCRKWETTFKKTSDDGEV--------YYSEEAKKKVEVLDTDYKSYAVIYATRVKD 105 Query: 145 NEDGTCADSYS 155 YS Sbjct: 106 GRTLHMMRLYS 116 >5H9K-A nrPDB Length = 156 Score = 32.1 bits (71), Expect = 0.16, Method: Composition-based stats. Identities = 35/147 (23%), Positives = 53/147 (36%), Gaps = 25/147 (17%) Query: 25 CRVSSFKVKENFDKNRY-SGTWYAMAKKDPEGLFLQDNVV--AQFTVDENGQMSATAKGR 81 C S K+ FD NR+ +G WY +D E + + ++ NG+ Sbjct: 10 CNALSGKIMSGFDANRFFTGDWYLTHSRDSEVPVRCEKYQTGSNLQLNFNGK-------- 61 Query: 82 VRLFNNWDVCADMIGSFTDTEDPAKFKMKYWG-VASFLQKGNDDHWVVDTDYDTYALHYS 140 N C+ S + G S++ VV+TDY YAL Y Sbjct: 62 ----NGDVKCSGSTVSGNQGFYSFQCTTTSGGSFTSYMA-------VVETDYANYALLYR 110 Query: 141 CRELNEDGTCADSYSFVFSRDPKGLPP 167 C T D++ +F+R G P Sbjct: 111 CGLYGST-TPKDNF-LLFNRQSSGEIP 135 >1EPB-A nrPDB Length = 164 Score = 32.1 bits (71), Expect = 0.17, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 18/111 (16%) Query: 32 VKENFDKNRYSGTWYAMA---KKDPEGLFLQDNVVAQF--TVDENGQMSATAKGRVRLFN 86 V ++FD +++ G WY +A K GL ++ + + EN A Sbjct: 2 VVKDFDISKFLGFWYEIAFASKMGTPGLAHKEEKMGAMVVELKEN----LLALTTTYY-- 55 Query: 87 NWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYAL 137 + D C + T+ + PAKF++ G + V TDY TYA+ Sbjct: 56 SEDHCVLEKVTATEGDGPAKFQVT-------RLSGKKEVVVEATDYLTYAI 99 >3CQR-A nrPDB Length = 185 Score = 32.1 bits (71), Expect = 0.17, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 58/151 (38%), Gaps = 9/151 (5%) Query: 34 ENFDKNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNNWDVCAD 93 +NF+ + ++G WY + +P D + +F + + ++ R++ ++ Sbjct: 16 QNFNISDFNGKWYITSGLNPT-FDAFDCQLHEFHTEGDNKLVGNISWRIKTLDSGFFTRS 74 Query: 94 MIGSFTDTEDPAKFKMKYWGVASFLQKGNDDHWVVDTDYDTYA-----LHYSCRELNEDG 148 + F +DP + + Y +L DD +++ + + ++Y R DG Sbjct: 75 AVQKFV--QDPNQPGVLYNHDNEYL-HYQDDWYILSSKIENKPEDYIFVYYRGRNDAWDG 131 Query: 149 TCADSYSFVFSRDPKGLPPEAQKIVRQRQID 179 S P + PE +K + D Sbjct: 132 YGGAVVYTRSSVLPNSIIPELEKAAKSIGRD 162 >2R73-A nrPDB Length = 166 Score = 31.7 bits (70), Expect = 0.19, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 32/94 (34%), Gaps = 3/94 (3%) Query: 91 CADMIGSFTDTEDPAKFKMKYWGVASFL---QKGNDDHWVVDTDYDTYALHYSCRELNED 147 C + + TE+ +FK+ Y+G K N+ + +Y ++ Sbjct: 73 CIPLYLTAFKTEEARQFKLNYYGTNDVYYESSKPNEYAKFIFYNYHDGKVNVVANLFGRT 132 Query: 148 GTCADSYSFVFSRDPKGLPPEAQKIVRQRQIDLC 181 ++ F D + I+ ++D C Sbjct: 133 PNLSNEIKKRFEEDFMNRGFRRENILDISEVDHC 166 >4K6M-A nrPDB Length = 915 Score = 31.7 bits (70), Expect = 0.21, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 6/66 (9%) Query: 38 KNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNN-WDVCADM-I 95 K ++ TW+ KDPE + + V G S+ G V+L + WD A++ Sbjct: 287 KEEFATTWH----KDPEHPYRTWTYHGSYEVKATGSASSLVNGVVKLMSKPWDAIANVTT 342 Query: 96 GSFTDT 101 + TDT Sbjct: 343 MAMTDT 348 >4HDG-A nrPDB Length = 639 Score = 31.7 bits (70), Expect = 0.21, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 6/66 (9%) Query: 38 KNRYSGTWYAMAKKDPEGLFLQDNVVAQFTVDENGQMSATAKGRVRLFNN-WDVCADM-I 95 K ++ TW+ KDPE + + V G S+ G V+L + WD A++ Sbjct: 21 KEEFATTWH----KDPEHPYRTWTYHGSYEVKATGSASSLVNGVVKLMSKPWDAIANVTT 76 Query: 96 GSFTDT 101 + TDT Sbjct: 77 MAMTDT 82 >3GTN-A nrPDB Length = 401 Score = 28.6 bits (62), Expect = 1.9, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 25/49 (51%) Query: 75 SATAKGRVRLFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGND 123 SA G + + W+ +DM+ +F D + ++KY A++ Q ND Sbjct: 72 SAVKHGAIVFASPWNPPSDMVETFNRNGDTSAKRLKYNKYAAYAQHLND 120 >4FMV-A nrPDB Length = 396 Score = 27.1 bits (58), Expect = 5.6, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 75 SATAKGRVRLFNNWDVCADMIGSFTDTEDPAKFKMKYWGVASFLQKGND-DHWVVDTDYD 133 A+AKG + + W+ A M +F+ + D + +++Y + Q N ++ D D Sbjct: 75 KASAKGAIVFASPWNPPASMQENFSKSGDSSAQRLRYDKYTEYAQYLNAYVKYMKDNGVD 134 Query: 134 TYAL 137 YA+ Sbjct: 135 LYAI 138 >3KYB-A nrPDB Length = 390 Score = 27.1 bits (58), Expect = 5.8, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 8/57 (14%) Query: 27 VSSFKVKENFDKNRYSGTWYAMAK----KDPEGLFLQDNV----VAQFTVDENGQMS 75 + V+ N+D N ++ + M K + + + +N+ +F VDE Sbjct: 172 LKRLPVRFNYDDNYFNHKFQGMPKCGYTQMIKSILNHENIKVDLQREFIVDERTHYD 228 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.124 0.337 Lambda K H 0.267 0.0384 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,184,429 Number of Sequences: 36641 Number of extensions: 262794 Number of successful extensions: 736 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 33 Number of HSP's that attempted gapping in prelim test: 616 Number of HSP's gapped (non-prelim): 86 length of query: 196 length of database: 10,336,785 effective HSP length: 92 effective length of query: 104 effective length of database: 6,965,813 effective search space: 724444552 effective search space used: 724444552 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 56 (26.3 bits)